Homology
BLAST of HG10006016 vs. NCBI nr
Match:
XP_038889862.1 (pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_038889863.1 pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_038889864.1 pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_038889865.1 pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_038889866.1 pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_038889867.1 pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_038889868.1 pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_038889869.1 pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_038889870.1 pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_038889871.1 pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_038889872.1 pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_038889873.1 pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_038889874.1 pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_038889875.1 pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida])
HSP 1 Score: 1635.2 bits (4233), Expect = 0.0e+00
Identity = 792/855 (92.63%), Postives = 833/855 (97.43%), Query Frame = 0
Query: 104 MIHHHCGSFLSRILTTLVQFYSTSTTSPPTIPFTSLLRQCRTLINAKLAHQQIFVNGFTE 163
MIHH+CGS+L+R+L+T VQFYSTST SPPTIPF S+L+QC+TLINAKLAHQQIFVNGFTE
Sbjct: 1 MIHHYCGSYLNRVLSTSVQFYSTSTISPPTIPFISILKQCKTLINAKLAHQQIFVNGFTE 60
Query: 164 MATYAVGAYIECGAFAEAVSLLQRLIPSHSTVFWWNALIRRSVRLGFLDDALGFYCQMQR 223
+ +YAVGAYIECGAF EAV+LLQRLIPSHSTVFWWNALIRRSVRLGFLDD LGFYCQMQR
Sbjct: 61 IISYAVGAYIECGAFVEAVTLLQRLIPSHSTVFWWNALIRRSVRLGFLDDTLGFYCQMQR 120
Query: 224 LGWLPDHYTFPFVLKACGEIPSFRRGASVHAIVCANGFESNVFICNSIVAMYGRCGALDD 283
LGWLPDHYTFPFVLKACGEIPSFR GASVHAIVCANGFESNVFICNS+VAMYGRCGAL D
Sbjct: 121 LGWLPDHYTFPFVLKACGEIPSFRCGASVHAIVCANGFESNVFICNSLVAMYGRCGALGD 180
Query: 284 ARQVFNEVLERKIEDIVSWNSILAAYVQGGESRTALRVALRMANHYSSKLRPDAITLVNI 343
ARQVF+EVLERKIEDIVSWNSILAAYVQG ES+TALR+A RMANHYS KLRPDAITLVNI
Sbjct: 181 ARQVFDEVLERKIEDIVSWNSILAAYVQGRESKTALRIAFRMANHYSFKLRPDAITLVNI 240
Query: 344 LPACASAFAPQHGKQVHGFSVRSGLVDDVFVGNALVDMYAKCSKMNEANKVFERMKEKDV 403
LPACASAFAPQHGKQVHGFS+RSGLVDDVFVGNALVDMYAKCSKMNEANKVFERMKEKDV
Sbjct: 241 LPACASAFAPQHGKQVHGFSIRSGLVDDVFVGNALVDMYAKCSKMNEANKVFERMKEKDV 300
Query: 404 VSWNAMVTGYSQIGSFDSALSLFKRMQEEDIELNVVTWSAVIAGYAQRGHGFEALDVFRQ 463
VSWNAMVTGYSQIGSFDSALSLFKRMQEEDI L+VVTWSAVIAGY+QRGHGFEAL+VFRQ
Sbjct: 301 VSWNAMVTGYSQIGSFDSALSLFKRMQEEDIALDVVTWSAVIAGYSQRGHGFEALNVFRQ 360
Query: 464 MQLCGWEPNVVTLVSLLSGCASVGALLHGKQTHAYAIKNILNLDWSDPGGDLMVLNGLID 523
MQLCG EPNVVTLVSLLSGCASVGALLHGKQTHAYAIKNILNLDW DPG DLMVLNGLID
Sbjct: 361 MQLCGLEPNVVTLVSLLSGCASVGALLHGKQTHAYAIKNILNLDWRDPGDDLMVLNGLID 420
Query: 524 MYAKCKSYKVARNIFDLIAGKDKNVVTWTVLIGGYAQHGEANDALELFAQIFKQETSLKP 583
MYAKC+SY+VARNIFDLIAGKDK+VVTWTV+IGGYAQHGEANDALELFAQIFKQETSLKP
Sbjct: 421 MYAKCQSYRVARNIFDLIAGKDKDVVTWTVMIGGYAQHGEANDALELFAQIFKQETSLKP 480
Query: 584 NAFTLSCALMACARLGALRLGRQLHAYALRHENGSEVLFVANCLIDMYSKSGDIDAAQAV 643
NAFTLSCALMACARLGALRLGRQLHAYALRHEN SEVL+VANCLIDMYSKSGDIDAA+AV
Sbjct: 481 NAFTLSCALMACARLGALRLGRQLHAYALRHENESEVLYVANCLIDMYSKSGDIDAARAV 540
Query: 644 FDNMKVRNAVSWTSLMTGYGMHGRGEEALHVFHQMRQAGFVIDGVTFLVVLYACSHSGMV 703
FDNMKVRN++SWTSLMTGYG+HG GEEALHVF QMRQAGFV+DG+TFLVVLYACSHSGMV
Sbjct: 541 FDNMKVRNSISWTSLMTGYGIHGCGEEALHVFDQMRQAGFVVDGITFLVVLYACSHSGMV 600
Query: 704 DQGMDYFHGMIKCFGVTPGAEHYACMVDLLGRAGRFNEAMELIKSMPMEPTAVVWVALLS 763
DQG++YF+GMIKCFGVTPGAEHYACMVDLLGRAGR +AM LIKSMPMEPTAVVWVALLS
Sbjct: 601 DQGVNYFNGMIKCFGVTPGAEHYACMVDLLGRAGRLKDAMGLIKSMPMEPTAVVWVALLS 660
Query: 764 ASRIHANIELGEYAASRLLESGAENDGSYTLLSNLYANARRWKDVARIRSLMKNTGIKKR 823
ASRIH+NIELGEYAAS+L+E GAENDGSYTLLSNLYANARRWKDVARIRSLMK+TGIKKR
Sbjct: 661 ASRIHSNIELGEYAASKLIELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIKKR 720
Query: 824 PGCSWIQGKKTTTTFFVGDRSHPESDQIYNLLSELIKQIKDMGYVPQTSFALHDVDDEEK 883
PGCSWIQGKK+TTTFFVGDRSHPESDQIYNLLSELIK+IKD+GYVPQTSFALHDVDDEEK
Sbjct: 721 PGCSWIQGKKSTTTFFVGDRSHPESDQIYNLLSELIKRIKDIGYVPQTSFALHDVDDEEK 780
Query: 884 GDLLFEHSEKLAVAYGILTSAPGQPIRINKNLRICGDCHSALTYISMIIDHEIILRDSSR 943
GDLLFEHSEKLAVAYGILTSAPGQPIRINKNLRICGDCHSALTYISMIIDHEIILRDSSR
Sbjct: 781 GDLLFEHSEKLAVAYGILTSAPGQPIRINKNLRICGDCHSALTYISMIIDHEIILRDSSR 840
Query: 944 FHHFKKGSCSCRSYW 959
FHHFKKGSCSCRSYW
Sbjct: 841 FHHFKKGSCSCRSYW 855
BLAST of HG10006016 vs. NCBI nr
Match:
XP_008455181.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g16860 [Cucumis melo] >XP_008455182.1 PREDICTED: pentatricopeptide repeat-containing protein At5g16860 [Cucumis melo] >XP_008455183.1 PREDICTED: pentatricopeptide repeat-containing protein At5g16860 [Cucumis melo] >XP_008455184.1 PREDICTED: pentatricopeptide repeat-containing protein At5g16860 [Cucumis melo] >XP_008455185.1 PREDICTED: pentatricopeptide repeat-containing protein At5g16860 [Cucumis melo] >XP_008455186.1 PREDICTED: pentatricopeptide repeat-containing protein At5g16860 [Cucumis melo] >XP_008455189.1 PREDICTED: pentatricopeptide repeat-containing protein At5g16860 [Cucumis melo] >XP_016901762.1 PREDICTED: pentatricopeptide repeat-containing protein At5g16860 [Cucumis melo])
HSP 1 Score: 1587.8 bits (4110), Expect = 0.0e+00
Identity = 770/857 (89.85%), Postives = 820/857 (95.68%), Query Frame = 0
Query: 102 SVMIHHHCGSFLSRILTTLVQFYSTSTTSPPTIPFTSLLRQCRTLINAKLAHQQIFVNGF 161
+VMIH CGS+LSRIL T V FYST TTSPPTIP SLLRQC+TLINAKLAHQQIFV+GF
Sbjct: 12 NVMIHPRCGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGF 71
Query: 162 TEMATYAVGAYIECGAFAEAVSLLQRLIPSHSTVFWWNALIRRSVRLGFLDDALGFYCQM 221
TEM +YAVGAYIECGA AEAVSLLQR+IPSHSTVFWWNALIRRSVRLG LDD LGFYCQM
Sbjct: 72 TEMFSYAVGAYIECGASAEAVSLLQRIIPSHSTVFWWNALIRRSVRLGLLDDTLGFYCQM 131
Query: 222 QRLGWLPDHYTFPFVLKACGEIPSFRRGASVHAIVCANGFESNVFICNSIVAMYGRCGAL 281
Q LGWLPDHYTFPFVLKACGEIPSFR GASVHA+VCA GFESNVFICNSIVAMYGRCGAL
Sbjct: 132 QSLGWLPDHYTFPFVLKACGEIPSFRHGASVHAVVCAKGFESNVFICNSIVAMYGRCGAL 191
Query: 282 DDARQVFNEVLERKIEDIVSWNSILAAYVQGGESRTALRVALRMANHYSSKLRPDAITLV 341
DDARQ+F+EVLER+IEDIVSWNSILAAYVQGG+SRTALR+A +M NHYS KLRPDAITLV
Sbjct: 192 DDARQMFDEVLERRIEDIVSWNSILAAYVQGGKSRTALRIAFQMGNHYSLKLRPDAITLV 251
Query: 342 NILPACASAFAPQHGKQVHGFSVRSGLVDDVFVGNALVDMYAKCSKMNEANKVFERMKEK 401
NILPACAS FA QHGKQVHGFSVRSGLVDDVFVGNALV MYAKCSKMNEANKVFER+K+K
Sbjct: 252 NILPACASIFAIQHGKQVHGFSVRSGLVDDVFVGNALVSMYAKCSKMNEANKVFERIKKK 311
Query: 402 DVVSWNAMVTGYSQIGSFDSALSLFKRMQEEDIELNVVTWSAVIAGYAQRGHGFEALDVF 461
DVVSWNAMVTGYSQIGSFDSALSLFK MQEEDI+L+V+TWSAVIAGYAQ+GHGFEALDVF
Sbjct: 312 DVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVF 371
Query: 462 RQMQLCGWEPNVVTLVSLLSGCASVGALLHGKQTHAYAIKNILNLDWSDPGGDLMVLNGL 521
RQMQL G EPNVVTLVSLLSGCASVGALL+GKQTHAY IKNILNL+WSD G D++VLNGL
Sbjct: 372 RQMQLYGLEPNVVTLVSLLSGCASVGALLYGKQTHAYVIKNILNLNWSDKGDDMLVLNGL 431
Query: 522 IDMYAKCKSYKVARNIFDLIAGKDKNVVTWTVLIGGYAQHGEANDALELFAQIFKQETSL 581
IDMYAKCKSY+VARNIFD IAGKDK+VVTWTV+IGGYAQHGEANDAL+LFAQIF+Q+TSL
Sbjct: 432 IDMYAKCKSYRVARNIFDSIAGKDKDVVTWTVMIGGYAQHGEANDALQLFAQIFEQKTSL 491
Query: 582 KPNAFTLSCALMACARLGALRLGRQLHAYALRHENGSEVLFVANCLIDMYSKSGDIDAAQ 641
KPNAFTLSCALMACARLG LRLGRQLHAYALR+EN SEVL+VANCLIDMYSKSGDIDAA+
Sbjct: 492 KPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVANCLIDMYSKSGDIDAAR 551
Query: 642 AVFDNMKVRNAVSWTSLMTGYGMHGRGEEALHVFHQMRQAGFVIDGVTFLVVLYACSHSG 701
AVF+NMK+RN VSWTSLMTGYGMHGRGEEALHVF QMRQ GFV+DG+TFLVVLYACSHSG
Sbjct: 552 AVFNNMKLRNVVSWTSLMTGYGMHGRGEEALHVFDQMRQLGFVVDGITFLVVLYACSHSG 611
Query: 702 MVDQGMDYFHGMIKCFGVTPGAEHYACMVDLLGRAGRFNEAMELIKSMPMEPTAVVWVAL 761
+VDQGM+YFH M+KCFG+TPGAEHYACMVDLLGRAGR NEAMELIKSM MEPTAVVWVAL
Sbjct: 612 LVDQGMNYFHDMVKCFGITPGAEHYACMVDLLGRAGRLNEAMELIKSMSMEPTAVVWVAL 671
Query: 762 LSASRIHANIELGEYAASRLLESGAENDGSYTLLSNLYANARRWKDVARIRSLMKNTGIK 821
LSASRIHANIELGEYAAS+L+E GAENDGSYTLLSNLYANARRWKDVARIRSLMK+TGI+
Sbjct: 672 LSASRIHANIELGEYAASKLIELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIR 731
Query: 822 KRPGCSWIQGKKTTTTFFVGDRSHPESDQIYNLLSELIKQIKDMGYVPQTSFALHDVDDE 881
KRPGCSWIQGKK+TTTFFVGDRSHPES+QIYNLLS+LIK+IKDMGYVPQTSFALHDVDDE
Sbjct: 732 KRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLSDLIKRIKDMGYVPQTSFALHDVDDE 791
Query: 882 EKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLRICGDCHSALTYISMIIDHEIILRDS 941
EKGDLLFEHSEKLAVAYGILT+APGQPIRI+KNLRICGDCHSALTYISMIIDHEIILRDS
Sbjct: 792 EKGDLLFEHSEKLAVAYGILTTAPGQPIRIHKNLRICGDCHSALTYISMIIDHEIILRDS 851
Query: 942 SRFHHFKKGSCSCRSYW 959
SRFHHFKKGSCSCRSYW
Sbjct: 852 SRFHHFKKGSCSCRSYW 868
BLAST of HG10006016 vs. NCBI nr
Match:
XP_004137054.2 (pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_011658790.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_011658791.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_011658792.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_011658793.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_011658794.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_011658795.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_011658796.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_011658797.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_011658798.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_011658799.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_011658800.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_031744346.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_031744347.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_031744348.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_031744349.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_031744350.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_031744351.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_031744352.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_031744353.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus])
HSP 1 Score: 1569.7 bits (4063), Expect = 0.0e+00
Identity = 763/857 (89.03%), Postives = 810/857 (94.52%), Query Frame = 0
Query: 102 SVMIHHHCGSFLSRILTTLVQFYSTSTTSPPTIPFTSLLRQCRTLINAKLAHQQIFVNGF 161
SVMIHHHCGS+LSRIL T V FYST TTSPPTIP SLLRQC+TLINAKLAHQQIFV+GF
Sbjct: 12 SVMIHHHCGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGF 71
Query: 162 TEMATYAVGAYIECGAFAEAVSLLQRLIPSHSTVFWWNALIRRSVRLGFLDDALGFYCQM 221
TEM +YAVGAYIECGA AEAVSLLQRLIPSHSTVFWWNALIRRSV+LG LDD LGFYCQM
Sbjct: 72 TEMFSYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQM 131
Query: 222 QRLGWLPDHYTFPFVLKACGEIPSFRRGASVHAIVCANGFESNVFICNSIVAMYGRCGAL 281
QRLGWLPDHYTFPFVLKACGEIPS R GASVHAIVCANG SNVFICNSIVAMYGRCGAL
Sbjct: 132 QRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGAL 191
Query: 282 DDARQVFNEVLERKIEDIVSWNSILAAYVQGGESRTALRVALRMANHYSSKLRPDAITLV 341
DDA Q+F+EVLERKIEDIVSWNSILAAYVQGG+SRTALR+A RM NHYS KLRPDAITLV
Sbjct: 192 DDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLV 251
Query: 342 NILPACASAFAPQHGKQVHGFSVRSGLVDDVFVGNALVDMYAKCSKMNEANKVFERMKEK 401
NILPACAS FA QHGKQVHGFSVR+GLVDDVFVGNALV MYAKCSKMNEANKVFE +K+K
Sbjct: 252 NILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKK 311
Query: 402 DVVSWNAMVTGYSQIGSFDSALSLFKRMQEEDIELNVVTWSAVIAGYAQRGHGFEALDVF 461
DVVSWNAMVTGYSQIGSFDSALSLFK MQEEDI+L+V+TWSAVIAGYAQ+GHGFEALDVF
Sbjct: 312 DVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVF 371
Query: 462 RQMQLCGWEPNVVTLVSLLSGCASVGALLHGKQTHAYAIKNILNLDWSDPGGDLMVLNGL 521
RQMQL G EPNVVTL SLLSGCASVGALL+GKQTHAY IKNILNL+W+D DL+VLNGL
Sbjct: 372 RQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGL 431
Query: 522 IDMYAKCKSYKVARNIFDLIAGKDKNVVTWTVLIGGYAQHGEANDALELFAQIFKQETSL 581
IDMYAKCKSY+VAR+IFD I GKDKNVVTWTV+IGGYAQHGEANDAL+LFAQIFKQ+TSL
Sbjct: 432 IDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSL 491
Query: 582 KPNAFTLSCALMACARLGALRLGRQLHAYALRHENGSEVLFVANCLIDMYSKSGDIDAAQ 641
KPNAFTLSCALMACARLG LRLGRQLHAYALR+EN SEVL+V NCLIDMYSKSGDIDAA+
Sbjct: 492 KPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAAR 551
Query: 642 AVFDNMKVRNAVSWTSLMTGYGMHGRGEEALHVFHQMRQAGFVIDGVTFLVVLYACSHSG 701
AVFDNMK+RN VSWTSLMTGYGMHGRGEEALH+F QM++ GF +DG+TFLVVLYACSHSG
Sbjct: 552 AVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSG 611
Query: 702 MVDQGMDYFHGMIKCFGVTPGAEHYACMVDLLGRAGRFNEAMELIKSMPMEPTAVVWVAL 761
MVDQGM YFH M+K FG+TPGAEHYACMVDLLGRAGR NEAMELIK+M MEPTAVVWVAL
Sbjct: 612 MVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVAL 671
Query: 762 LSASRIHANIELGEYAASRLLESGAENDGSYTLLSNLYANARRWKDVARIRSLMKNTGIK 821
LSASRIHANIELGEYAAS+L E GAENDGSYTLLSNLYANARRWKDVARIRSLMK+TGI+
Sbjct: 672 LSASRIHANIELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIR 731
Query: 822 KRPGCSWIQGKKTTTTFFVGDRSHPESDQIYNLLSELIKQIKDMGYVPQTSFALHDVDDE 881
KRPGCSWIQGKK+TTTFFVGDRSHPES+QIYNLL +LIK+IKDMGYVPQTSFALHDVDDE
Sbjct: 732 KRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLLDLIKRIKDMGYVPQTSFALHDVDDE 791
Query: 882 EKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLRICGDCHSALTYISMIIDHEIILRDS 941
EKGDLLFEHSEKLAVAYGILT+APGQPIRI+KNLRICGDCHSALTYISMIIDHEI+LRDS
Sbjct: 792 EKGDLLFEHSEKLAVAYGILTTAPGQPIRIHKNLRICGDCHSALTYISMIIDHEIVLRDS 851
Query: 942 SRFHHFKKGSCSCRSYW 959
SRFHHFKKGSCSCRSYW
Sbjct: 852 SRFHHFKKGSCSCRSYW 868
BLAST of HG10006016 vs. NCBI nr
Match:
XP_022143067.1 (pentatricopeptide repeat-containing protein At5g16860 isoform X1 [Momordica charantia] >XP_022143068.1 pentatricopeptide repeat-containing protein At5g16860 isoform X1 [Momordica charantia] >XP_022143069.1 pentatricopeptide repeat-containing protein At5g16860 isoform X1 [Momordica charantia] >XP_022143070.1 pentatricopeptide repeat-containing protein At5g16860 isoform X1 [Momordica charantia] >XP_022143071.1 pentatricopeptide repeat-containing protein At5g16860 isoform X1 [Momordica charantia] >XP_022143072.1 pentatricopeptide repeat-containing protein At5g16860 isoform X1 [Momordica charantia] >XP_022143074.1 pentatricopeptide repeat-containing protein At5g16860 isoform X1 [Momordica charantia] >XP_022143075.1 pentatricopeptide repeat-containing protein At5g16860 isoform X1 [Momordica charantia] >XP_022143076.1 pentatricopeptide repeat-containing protein At5g16860 isoform X1 [Momordica charantia] >XP_022143077.1 pentatricopeptide repeat-containing protein At5g16860 isoform X1 [Momordica charantia] >XP_022143078.1 pentatricopeptide repeat-containing protein At5g16860 isoform X1 [Momordica charantia] >XP_022143079.1 pentatricopeptide repeat-containing protein At5g16860 isoform X1 [Momordica charantia] >XP_022143080.1 pentatricopeptide repeat-containing protein At5g16860 isoform X1 [Momordica charantia] >XP_022143081.1 pentatricopeptide repeat-containing protein At5g16860 isoform X1 [Momordica charantia] >XP_022143082.1 pentatricopeptide repeat-containing protein At5g16860 isoform X1 [Momordica charantia])
HSP 1 Score: 1562.4 bits (4044), Expect = 0.0e+00
Identity = 759/855 (88.77%), Postives = 805/855 (94.15%), Query Frame = 0
Query: 104 MIHHHCGSFLSRILTTLVQFYSTSTTSPPTIPFTSLLRQCRTLINAKLAHQQIFVNGFTE 163
MIHH C S++SRIL + V YSTS TS IP SLL+QCRTLINAKLAHQQI VNGFT+
Sbjct: 1 MIHHSCASYVSRILPSSVPCYSTSATS---IPLISLLQQCRTLINAKLAHQQILVNGFTQ 60
Query: 164 MATYAVGAYIECGAFAEAVSLLQRLIPSHSTVFWWNALIRRSVRLGFLDDALGFYCQMQR 223
M TYA+GAYIECGA A+AVSLLQRLIPSHSTVFWWNALIRRSVRLGFLDD LGFYCQMQR
Sbjct: 61 MVTYAIGAYIECGASAQAVSLLQRLIPSHSTVFWWNALIRRSVRLGFLDDVLGFYCQMQR 120
Query: 224 LGWLPDHYTFPFVLKACGEIPSFRRGASVHAIVCANGFESNVFICNSIVAMYGRCGALDD 283
LGW PDHYTFPFVLKACGEIPSFRRGASVHA+VCANGFESNVFICNSIVAMYGRCGALDD
Sbjct: 121 LGWSPDHYTFPFVLKACGEIPSFRRGASVHAVVCANGFESNVFICNSIVAMYGRCGALDD 180
Query: 284 ARQVFNEVLERKIEDIVSWNSILAAYVQGGESRTALRVALRMANHYSSKLRPDAITLVNI 343
ARQVF+EVLERKIEDIVSWNSILAAYVQGGES+TALR+A+RMANHY+ KL PDAITLVNI
Sbjct: 181 ARQVFDEVLERKIEDIVSWNSILAAYVQGGESKTALRIAVRMANHYNCKLLPDAITLVNI 240
Query: 344 LPACASAFAPQHGKQVHGFSVRSGLVDDVFVGNALVDMYAKCSKMNEANKVFERMKEKDV 403
LPACAS APQHGKQVHG++VRSGLVDDVFVGNALVDMYAKC KM+EA++VFE MKEKDV
Sbjct: 241 LPACASTLAPQHGKQVHGYAVRSGLVDDVFVGNALVDMYAKCWKMDEASRVFELMKEKDV 300
Query: 404 VSWNAMVTGYSQIGSFDSALSLFKRMQEEDIELNVVTWSAVIAGYAQRGHGFEALDVFRQ 463
VSWNAMVTGYSQI FD ALSLFKRMQEEDIELNVVTWSA+IAGY+QRG GFEALDVFRQ
Sbjct: 301 VSWNAMVTGYSQISRFDDALSLFKRMQEEDIELNVVTWSALIAGYSQRGLGFEALDVFRQ 360
Query: 464 MQLCGWEPNVVTLVSLLSGCASVGALLHGKQTHAYAIKNILNLDWSDPGGDLMVLNGLID 523
MQLCG EPNVVTLVSLLSGCASVGALLHGKQTHAYAIKNILN DW+DPG DLMVLNGLID
Sbjct: 361 MQLCGLEPNVVTLVSLLSGCASVGALLHGKQTHAYAIKNILNFDWNDPGDDLMVLNGLID 420
Query: 524 MYAKCKSYKVARNIFDLIAGKDKNVVTWTVLIGGYAQHGEANDALELFAQIFKQETSLKP 583
MYAKCKS KVARNIFDLI K+KNVVTWTV+IGGYAQHGEANDALELF+Q+FK ETSLKP
Sbjct: 421 MYAKCKSSKVARNIFDLITRKNKNVVTWTVMIGGYAQHGEANDALELFSQMFKHETSLKP 480
Query: 584 NAFTLSCALMACARLGALRLGRQLHAYALRHENGSEVLFVANCLIDMYSKSGDIDAAQAV 643
NAFTLSCALMACARLGALRLGRQ+HAYALRHEN +EVL+VANCLIDMYSKSGDIDAAQ V
Sbjct: 481 NAFTLSCALMACARLGALRLGRQIHAYALRHENENEVLYVANCLIDMYSKSGDIDAAQTV 540
Query: 644 FDNMKVRNAVSWTSLMTGYGMHGRGEEALHVFHQMRQAGFVIDGVTFLVVLYACSHSGMV 703
FDNMKVRNAVSWTSLMTGYGMHGRGEEALH+F QM+QA +DGVTFLVVLYACSHSGMV
Sbjct: 541 FDNMKVRNAVSWTSLMTGYGMHGRGEEALHIFDQMQQADLAVDGVTFLVVLYACSHSGMV 600
Query: 704 DQGMDYFHGMIKCFGVTPGAEHYACMVDLLGRAGRFNEAMELIKSMPMEPTAVVWVALLS 763
DQGM+YFHGMIK FGV PGAEHYACMVDLLGRAGR NEAMELIKSM EPTAVVWVALLS
Sbjct: 601 DQGMNYFHGMIKYFGVAPGAEHYACMVDLLGRAGRLNEAMELIKSMSTEPTAVVWVALLS 660
Query: 764 ASRIHANIELGEYAASRLLESGAENDGSYTLLSNLYANARRWKDVARIRSLMKNTGIKKR 823
ASRIHAN+ELGEYAA++L+ESG ENDGSYTLLSNLYANARRWKDVARIRSLMK+TGIKKR
Sbjct: 661 ASRIHANVELGEYAANKLIESGLENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIKKR 720
Query: 824 PGCSWIQGKKTTTTFFVGDRSHPESDQIYNLLSELIKQIKDMGYVPQTSFALHDVDDEEK 883
PGCSW+QGKK TTTFFVGDRSHP+SDQIY +L++LI++IKDMGYVPQTSFALHDVDDEEK
Sbjct: 721 PGCSWVQGKKGTTTFFVGDRSHPQSDQIYGILADLIQRIKDMGYVPQTSFALHDVDDEEK 780
Query: 884 GDLLFEHSEKLAVAYGILTSAPGQPIRINKNLRICGDCHSALTYISMIIDHEIILRDSSR 943
GDLLFEHSEKLAVAYGILTS+PGQPIRINKNLRICGDCHSALTYISMII+HEIILRDSSR
Sbjct: 781 GDLLFEHSEKLAVAYGILTSSPGQPIRINKNLRICGDCHSALTYISMIIEHEIILRDSSR 840
Query: 944 FHHFKKGSCSCRSYW 959
FHHFK GSCSCR YW
Sbjct: 841 FHHFKNGSCSCRGYW 852
BLAST of HG10006016 vs. NCBI nr
Match:
KAA0031472.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK06925.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1547.3 bits (4005), Expect = 0.0e+00
Identity = 753/839 (89.75%), Postives = 802/839 (95.59%), Query Frame = 0
Query: 104 MIHHHCGSFLSRILTTLVQFYSTSTTSPPTIPFTSLLRQCRTLINAKLAHQQIFVNGFTE 163
MIH CGS+LSRIL T V FYST TTSPPTIP SLLRQC+TLINAKLAHQQIFV+GFTE
Sbjct: 1 MIHPRCGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTE 60
Query: 164 MATYAVGAYIECGAFAEAVSLLQRLIPSHSTVFWWNALIRRSVRLGFLDDALGFYCQMQR 223
M +YAVGAYIECGA AEAVSLLQR+IPSHSTVFWWNALIRRSVRLG LDD LGFYCQMQ
Sbjct: 61 MFSYAVGAYIECGASAEAVSLLQRIIPSHSTVFWWNALIRRSVRLGLLDDTLGFYCQMQS 120
Query: 224 LGWLPDHYTFPFVLKACGEIPSFRRGASVHAIVCANGFESNVFICNSIVAMYGRCGALDD 283
LGWLPDHYTFPFVLKACGEIPSFR GASVHA+VCA GFESNVFICNSIVAMYGRCGALDD
Sbjct: 121 LGWLPDHYTFPFVLKACGEIPSFRHGASVHAVVCAKGFESNVFICNSIVAMYGRCGALDD 180
Query: 284 ARQVFNEVLERKIEDIVSWNSILAAYVQGGESRTALRVALRMANHYSSKLRPDAITLVNI 343
ARQ+F+EVLER+IEDIVSWNSILAAYVQGG+SRTALR+A +M NHYS KLRPDAITLVNI
Sbjct: 181 ARQMFDEVLERRIEDIVSWNSILAAYVQGGKSRTALRIAFQMGNHYSLKLRPDAITLVNI 240
Query: 344 LPACASAFAPQHGKQVHGFSVRSGLVDDVFVGNALVDMYAKCSKMNEANKVFERMKEKDV 403
LPACAS FA QHGKQVHGFSVRSGLVDDVFVGNALV MYAKCSKMNEANKVFER+K+KDV
Sbjct: 241 LPACASIFAIQHGKQVHGFSVRSGLVDDVFVGNALVSMYAKCSKMNEANKVFERIKKKDV 300
Query: 404 VSWNAMVTGYSQIGSFDSALSLFKRMQEEDIELNVVTWSAVIAGYAQRGHGFEALDVFRQ 463
VSWNAMVTGYSQIGSFDSALSLFK MQEEDI+L+V+TWSAVIAGYAQ+GHGFEALDVFRQ
Sbjct: 301 VSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQ 360
Query: 464 MQLCGWEPNVVTLVSLLSGCASVGALLHGKQTHAYAIKNILNLDWSDPGGDLMVLNGLID 523
MQL G EPNVVTLVSLLSGCASVGALL+GKQTHAY IKNILNL+WSD G D++VLNGLID
Sbjct: 361 MQLYGLEPNVVTLVSLLSGCASVGALLYGKQTHAYVIKNILNLNWSDKGDDMLVLNGLID 420
Query: 524 MYAKCKSYKVARNIFDLIAGKDKNVVTWTVLIGGYAQHGEANDALELFAQIFKQETSLKP 583
MYAKCKSY+VARNIFD IAGKDK+VVTWTV+IGGYAQHGEANDAL+LFAQIF+Q+TSLKP
Sbjct: 421 MYAKCKSYRVARNIFDSIAGKDKDVVTWTVMIGGYAQHGEANDALQLFAQIFEQKTSLKP 480
Query: 584 NAFTLSCALMACARLGALRLGRQLHAYALRHENGSEVLFVANCLIDMYSKSGDIDAAQAV 643
NAFTLSCALMACARLG LRLGRQLHAYALR+EN SEVL+VANCLIDMYSKSGDIDAA+AV
Sbjct: 481 NAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVANCLIDMYSKSGDIDAARAV 540
Query: 644 FDNMKVRNAVSWTSLMTGYGMHGRGEEALHVFHQMRQAGFVIDGVTFLVVLYACSHSGMV 703
F+NMK+RN VSWTSLMTGYGMHGRGEEALHVF QMRQ GFV+DG+TFLVVLYACSHSG+V
Sbjct: 541 FNNMKLRNVVSWTSLMTGYGMHGRGEEALHVFDQMRQLGFVVDGITFLVVLYACSHSGLV 600
Query: 704 DQGMDYFHGMIKCFGVTPGAEHYACMVDLLGRAGRFNEAMELIKSMPMEPTAVVWVALLS 763
DQGM+YFH M+KCFG+TPGAEHYACMVDLLGRAGR NEAMELIKSM MEPTAVVWVALLS
Sbjct: 601 DQGMNYFHDMVKCFGITPGAEHYACMVDLLGRAGRLNEAMELIKSMSMEPTAVVWVALLS 660
Query: 764 ASRIHANIELGEYAASRLLESGAENDGSYTLLSNLYANARRWKDVARIRSLMKNTGIKKR 823
ASRIHANIELGEYAAS+L+E GAENDGSYTLLSNLYANARRWKDVARIRSLMK+TGI+KR
Sbjct: 661 ASRIHANIELGEYAASKLIELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKR 720
Query: 824 PGCSWIQGKKTTTTFFVGDRSHPESDQIYNLLSELIKQIKDMGYVPQTSFALHDVDDEEK 883
PGCSWIQGKK+TTTFFVGDRSHPES+QIYNLLS+LIK+IKDMGYVPQTSFALHDVDDEEK
Sbjct: 721 PGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLSDLIKRIKDMGYVPQTSFALHDVDDEEK 780
Query: 884 GDLLFEHSEKLAVAYGILTSAPGQPIRINKNLRICGDCHSALTYISMIIDHEIILRDSS 943
GDLLFEHSEKLAVAYGILT+APGQPIRI+KNLRICGDCHSALTYISMIIDHEIILRDSS
Sbjct: 781 GDLLFEHSEKLAVAYGILTTAPGQPIRIHKNLRICGDCHSALTYISMIIDHEIILRDSS 839
BLAST of HG10006016 vs. ExPASy Swiss-Prot
Match:
Q9LFL5 (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H92 PE=2 SV=1)
HSP 1 Score: 1034.2 bits (2673), Expect = 8.9e-301
Identity = 498/834 (59.71%), Postives = 630/834 (75.54%), Query Frame = 0
Query: 127 STTSPPTIPFTSLLRQCRTLINAKLAHQQIFVNGF--TEMATYAVGAYIECGAFAEAVSL 186
ST++P P + +C+T+ KL HQ++ G + ++ + YI G + AVSL
Sbjct: 24 STSAPEITP--PFIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSL 83
Query: 187 LQRLIPSHSTVFWWNALIRRSVRLGFLDDALGFYCQMQRLGWLPDHYTFPFVLKACGEIP 246
L+R PS + V+ WN+LIR G + L + M L W PD+YTFPFV KACGEI
Sbjct: 84 LRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEIS 143
Query: 247 SFRRGASVHAIVCANGFESNVFICNSIVAMYGRCGALDDARQVFNEVLERKIEDIVSWNS 306
S R G S HA+ GF SNVF+ N++VAMY RC +L DAR+VF+E+ + D+VSWNS
Sbjct: 144 SVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM---SVWDVVSWNS 203
Query: 307 ILAAYVQGGESRTALRVALRMANHYSSKLRPDAITLVNILPACASAFAPQHGKQVHGFSV 366
I+ +Y + G+ + AL + RM N + RPD ITLVN+LP CAS GKQ+H F+V
Sbjct: 204 IIESYAKLGKPKVALEMFSRMTNEFG--CRPDNITLVNVLPPCASLGTHSLGKQLHCFAV 263
Query: 367 RSGLVDDVFVGNALVDMYAKCSKMNEANKVFERMKEKDVVSWNAMVTGYSQIGSFDSALS 426
S ++ ++FVGN LVDMYAKC M+EAN VF M KDVVSWNAMV GYSQIG F+ A+
Sbjct: 264 TSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVR 323
Query: 427 LFKRMQEEDIELNVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGWEPNVVTLVSLLSGCA 486
LF++MQEE I+++VVTWSA I+GYAQRG G+EAL V RQM G +PN VTL+S+LSGCA
Sbjct: 324 LFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA 383
Query: 487 SVGALLHGKQTHAYAIKNILNLDWSDPGGDLMVLNGLIDMYAKCKSYKVARNIFDLIAGK 546
SVGAL+HGK+ H YAIK ++L + G + MV+N LIDMYAKCK AR +FD ++ K
Sbjct: 384 SVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPK 443
Query: 547 DKNVVTWTVLIGGYAQHGEANDALELFAQIFKQETSLKPNAFTLSCALMACARLGALRLG 606
+++VVTWTV+IGGY+QHG+AN ALEL +++F+++ +PNAFT+SCAL+ACA L ALR+G
Sbjct: 444 ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIG 503
Query: 607 RQLHAYALRHENGSEVLFVANCLIDMYSKSGDIDAAQAVFDNMKVRNAVSWTSLMTGYGM 666
+Q+HAYALR++ + LFV+NCLIDMY+K G I A+ VFDNM +N V+WTSLMTGYGM
Sbjct: 504 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGM 563
Query: 667 HGRGEEALHVFHQMRQAGFVIDGVTFLVVLYACSHSGMVDQGMDYFHGMIKCFGVTPGAE 726
HG GEEAL +F +MR+ GF +DGVT LVVLYACSHSGM+DQGM+YF+ M FGV+PG E
Sbjct: 564 HGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPE 623
Query: 727 HYACMVDLLGRAGRFNEAMELIKSMPMEPTAVVWVALLSASRIHANIELGEYAASRLLES 786
HYAC+VDLLGRAGR N A+ LI+ MPMEP VVWVA LS RIH +ELGEYAA ++ E
Sbjct: 624 HYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITEL 683
Query: 787 GAENDGSYTLLSNLYANARRWKDVARIRSLMKNTGIKKRPGCSWIQGKKTTTTFFVGDRS 846
+ +DGSYTLLSNLYANA RWKDV RIRSLM++ G+KKRPGCSW++G K TTTFFVGD++
Sbjct: 684 ASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKT 743
Query: 847 HPESDQIYNLLSELIKQIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSA 906
HP + +IY +L + +++IKD+GYVP+T FALHDVDDEEK DLLFEHSEKLA+AYGILT+
Sbjct: 744 HPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTP 803
Query: 907 PGQPIRINKNLRICGDCHSALTYISMIIDHEIILRDSSRFHHFKKGSCSCRSYW 959
G IRI KNLR+CGDCH+A TY+S IIDH+IILRDSSRFHHFK GSCSC+ YW
Sbjct: 804 QGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
BLAST of HG10006016 vs. ExPASy Swiss-Prot
Match:
Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)
HSP 1 Score: 550.4 bits (1417), Expect = 3.9e-155
Identity = 302/827 (36.52%), Postives = 460/827 (55.62%), Query Frame = 0
Query: 138 SLLRQC---RTLINAKLAHQQIFVNGF---TEMATYAVGAYIECGAFAEAVSLLQRLIPS 197
S+L+ C ++L + K I NGF + + + Y CG EA + +
Sbjct: 99 SVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV--K 158
Query: 198 HSTVFWWNALIRRSVRLGFLDDALGFYCQMQRLGWLPDHYTFPFVLKACGEIPSFRRGAS 257
+WN L+ + G ++G + +M G D YTF V K+ + S G
Sbjct: 159 IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQ 218
Query: 258 VHAIVCANGFESNVFICNSIVAMYGRCGALDDARQVFNEVLERKIEDIVSWNSILAAYVQ 317
+H + +GF + NS+VA Y + +D AR+VF+E+ ER D++SWNSI+ YV
Sbjct: 219 LHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER---DVISWNSIINGYVS 278
Query: 318 GGESRTALRVALRMANHYSSKLRPDAITLVNILPACASAFAPQHGKQVHGFSVRSGLVDD 377
G + L V ++M S + D T+V++ CA + G+ VH V++ +
Sbjct: 279 NGLAEKGLSVFVQM---LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 338
Query: 378 VFVGNALVDMYAKCSKMNEANKVFERMKEKDVVSWNAMVTGYSQIGSFDSALSLFKRMQE 437
N L+DMY+KC ++ A VF M ++ VVS+ +M+ GY++ G A+ LF+ M+E
Sbjct: 339 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 398
Query: 438 EDIELNVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGWEPNVVTLVSLLSGCASVGALLH 497
E G P+V T+ ++L+ CA L
Sbjct: 399 E-----------------------------------GISPDVYTVTAVLNCCARYRLLDE 458
Query: 498 GKQTHAYAIKNILNLDWSDPGGDLMVLNGLIDMYAKCKSYKVARNIFDLIAGKDKNVVTW 557
GK+ H + +N D G D+ V N L+DMYAKC S + A +F + KD +++W
Sbjct: 459 GKRVHEWIKEN-------DLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKD--IISW 518
Query: 558 TVLIGGYAQHGEANDALELFAQIFKQETSLKPNAFTLSCALMACARLGALRLGRQLHAYA 617
+IGGY+++ AN+AL LF + +E P+ T++C L ACA L A GR++H Y
Sbjct: 519 NTIIGGYSKNCYANEALSLF-NLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYI 578
Query: 618 LRHENGSEVLFVANCLIDMYSKSGDIDAAQAVFDNMKVRNAVSWTSLMTGYGMHGRGEEA 677
+R+ S+ VAN L+DMY+K G + A +FD++ ++ VSWT ++ GYGMHG G+EA
Sbjct: 579 MRNGYFSD-RHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEA 638
Query: 678 LHVFHQMRQAGFVIDGVTFLVVLYACSHSGMVDQGMDYFHGMIKCFGVTPGAEHYACMVD 737
+ +F+QMRQAG D ++F+ +LYACSHSG+VD+G +F+ M + P EHYAC+VD
Sbjct: 639 IALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVD 698
Query: 738 LLGRAGRFNEAMELIKSMPMEPTAVVWVALLSASRIHANIELGEYAASRLLESGAENDGS 797
+L R G +A I++MP+ P A +W ALL RIH +++L E A ++ E EN G
Sbjct: 699 MLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGY 758
Query: 798 YTLLSNLYANARRWKDVARIRSLMKNTGIKKRPGCSWIQGKKTTTTFFVGDRSHPESDQI 857
Y L++N+YA A +W+ V R+R + G++K PGCSWI+ K F GD S+PE++ I
Sbjct: 759 YVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENI 818
Query: 858 YNLLSELIKQIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRI 917
L ++ ++ + GY P T +AL D ++ EK + L HSEKLA+A GI++S G+ IR+
Sbjct: 819 EAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRV 871
Query: 918 NKNLRICGDCHSALTYISMIIDHEIILRDSSRFHHFKKGSCSCRSYW 959
KNLR+CGDCH ++S + EI+LRDS+RFH FK G CSCR +W
Sbjct: 879 TKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
BLAST of HG10006016 vs. ExPASy Swiss-Prot
Match:
Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 541.6 bits (1394), Expect = 1.8e-152
Identity = 293/827 (35.43%), Postives = 461/827 (55.74%), Query Frame = 0
Query: 135 PFTSLLRQCRTLINAKLAHQQIFVNGFTE---MATYAVGAYIECGAFAEAVSLLQRLIPS 194
P LL +C +L + +F NG + T V + G+ EA + + +
Sbjct: 39 PAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSK 98
Query: 195 HSTVFWWNALIRRSVRLGFLDDALGFYCQMQRLGWLPDHYTFPFVLKACGEIPSFRRGAS 254
+ ++ + +++ ++ LD AL F+ +M+ P Y F ++LK CG+ R G
Sbjct: 99 LNVLY--HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKE 158
Query: 255 VHAIVCANGFESNVFICNSIVAMYGRCGALDDARQVFNEVLERKIEDIVSWNSILAAYVQ 314
+H ++ +GF ++F + MY +C +++AR+VF+ + ER D+VSWN+I+A Y Q
Sbjct: 159 IHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER---DLVSWNTIVAGYSQ 218
Query: 315 GGESRTALRVALRMANHYSSKLRPDAITLVNILPACASAFAPQHGKQVHGFSVRSGLVDD 374
G +R AL + M L+P IT+V++LPA ++ GK++HG+++RSG
Sbjct: 219 NGMARMALEMVKSMC---EENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSL 278
Query: 375 VFVGNALVDMYAKCSKMNEANKVFERMKEKDVVSWNAMVTGYSQIGSFDSALSLFKRMQE 434
V + ALVDMYAKC + A ++F+ M E++VVSWN+M+ Y Q + A+ +F++M +
Sbjct: 279 VNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD 338
Query: 435 EDIELNVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGWEPNVVTLVSLLSGCASVGALLH 494
E G +P V+++ L CA +G L
Sbjct: 339 E-----------------------------------GVKPTDVSVMGALHACADLGDLER 398
Query: 495 GKQTHAYAIKNILNLDWSDPGGDLMVLNGLIDMYAKCKSYKVARNIFDLIAGKDKNVVTW 554
G+ H +++ L LD ++ V+N LI MY KCK A ++F + + + +V+W
Sbjct: 399 GRFIHKLSVE--LGLD-----RNVSVVNSLISMYCKCKEVDTAASMFGKL--QSRTLVSW 458
Query: 555 TVLIGGYAQHGEANDALELFAQIFKQETSLKPNAFTLSCALMACARLGALRLGRQLHAYA 614
+I G+AQ+G DAL F+Q+ + ++KP+ FT + A A L + +H
Sbjct: 459 NAMILGFAQNGRPIDALNYFSQM--RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVV 518
Query: 615 LRHENGSEVLFVANCLIDMYSKSGDIDAAQAVFDNMKVRNAVSWTSLMTGYGMHGRGEEA 674
+R V FV L+DMY+K G I A+ +FD M R+ +W +++ GYG HG G+ A
Sbjct: 519 MRSCLDKNV-FVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAA 578
Query: 675 LHVFHQMRQAGFVIDGVTFLVVLYACSHSGMVDQGMDYFHGMIKCFGVTPGAEHYACMVD 734
L +F +M++ +GVTFL V+ ACSHSG+V+ G+ F+ M + + + +HY MVD
Sbjct: 579 LELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVD 638
Query: 735 LLGRAGRFNEAMELIKSMPMEPTAVVWVALLSASRIHANIELGEYAASRLLESGAENDGS 794
LLGRAGR NEA + I MP++P V+ A+L A +IH N+ E AA RL E ++ G
Sbjct: 639 LLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGY 698
Query: 795 YTLLSNLYANARRWKDVARIRSLMKNTGIKKRPGCSWIQGKKTTTTFFVGDRSHPESDQI 854
+ LL+N+Y A W+ V ++R M G++K PGCS ++ K +FF G +HP+S +I
Sbjct: 699 HVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKI 758
Query: 855 YNLLSELIKQIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRI 914
Y L +LI IK+ GYVP T+ L V+++ K LL HSEKLA+++G+L + G I +
Sbjct: 759 YAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHV 809
Query: 915 NKNLRICGDCHSALTYISMIIDHEIILRDSSRFHHFKKGSCSCRSYW 959
KNLR+C DCH+A YIS++ EI++RD RFHHFK G+CSC YW
Sbjct: 819 RKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
BLAST of HG10006016 vs. ExPASy Swiss-Prot
Match:
Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)
HSP 1 Score: 536.2 bits (1380), Expect = 7.6e-151
Identity = 283/726 (38.98%), Postives = 426/726 (58.68%), Query Frame = 0
Query: 266 FICNSIVAMYGRCGALDDARQVFNEVLERKIEDIVSWNSILAAYVQGGESRTALRVALRM 325
F N++++ Y + G +D + F+++ +R D VSW +++ Y G+ A+RV M
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQR---DSVSWTTMIVGYKNIGQYHKAIRV---M 140
Query: 326 ANHYSSKLRPDAITLVNILPACASAFAPQHGKQVHGFSVRSGLVDDVFVGNALVDMYAKC 385
+ + P TL N+L + A+ + GK+VH F V+ GL +V V N+L++MYAKC
Sbjct: 141 GDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKC 200
Query: 386 SKMNEANKVFERMKEKDVVSWNAMVTGYSQIGSFDSALSLFKRMQEEDIELNVVTWSAVI 445
A VF+RM +D+ SWNAM+ + Q+G D A++ F++M E DI VTW+++I
Sbjct: 201 GDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI----VTWNSMI 260
Query: 446 AGYAQRGHGFEALDVFRQMQLCG-WEPNVVTLVSLLSGCASVGALLHGKQTHAYAIKNIL 505
+G+ QRG+ ALD+F +M P+ TL S+LS CA++ L GKQ H++ +
Sbjct: 261 SGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGF 320
Query: 506 NLDWSDPGGDLMVLNGLIDMYAKCKSYKVARNIFD------------------------- 565
++ +VLN LI MY++C + AR + +
Sbjct: 321 DISG-------IVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDM 380
Query: 566 ------LIAGKDKNVVTWTVLIGGYAQHGEANDALELFAQIFKQETSLKPNAFTLSCALM 625
++ KD++VV WT +I GY QHG +A+ LF + +PN++TL+ L
Sbjct: 381 NQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV--GGGQRPNSYTLAAMLS 440
Query: 626 ACARLGALRLGRQLHAYALRHENGSEVLFVANCLIDMYSKSGDIDAAQAVFDNMKV-RNA 685
+ L +L G+Q+H A++ V V+N LI MY+K+G+I +A FD ++ R+
Sbjct: 441 VASSLASLSHGKQIHGSAVKSGEIYSV-SVSNALITMYAKAGNITSASRAFDLIRCERDT 500
Query: 686 VSWTSLMTGYGMHGRGEEALHVFHQMRQAGFVIDGVTFLVVLYACSHSGMVDQGMDYFHG 745
VSWTS++ HG EEAL +F M G D +T++ V AC+H+G+V+QG YF
Sbjct: 501 VSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDM 560
Query: 746 MIKCFGVTPGAEHYACMVDLLGRAGRFNEAMELIKSMPMEPTAVVWVALLSASRIHANIE 805
M + P HYACMVDL GRAG EA E I+ MP+EP V W +LLSA R+H NI+
Sbjct: 561 MKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNID 620
Query: 806 LGEYAASRLLESGAENDGSYTLLSNLYANARRWKDVARIRSLMKNTGIKKRPGCSWIQGK 865
LG+ AA RLL EN G+Y+ L+NLY+ +W++ A+IR MK+ +KK G SWI+ K
Sbjct: 621 LGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVK 680
Query: 866 KTTTTFFVGDRSHPESDQIYNLLSELIKQIKDMGYVPQTSFALHDVDDEEKGDLLFEHSE 925
F V D +HPE ++IY + ++ +IK MGYVP T+ LHD+++E K +L HSE
Sbjct: 681 HKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSE 740
Query: 926 KLAVAYGILTSAPGQPIRINKNLRICGDCHSALTYISMIIDHEIILRDSSRFHHFKKGSC 959
KLA+A+G++++ +RI KNLR+C DCH+A+ +IS ++ EII+RD++RFHHFK G C
Sbjct: 741 KLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFC 786
BLAST of HG10006016 vs. ExPASy Swiss-Prot
Match:
Q0WN60 (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H8 PE=2 SV=2)
HSP 1 Score: 534.3 bits (1375), Expect = 2.9e-150
Identity = 302/866 (34.87%), Postives = 465/866 (53.70%), Query Frame = 0
Query: 164 MATYAVGAYIECGAFAEAVSLLQRLIPSHSTVFWWNALIRRSVRLGFLDDALGFYCQM-Q 223
+ T + Y CG+ ++ + L +F WNA+I R D+ L + +M
Sbjct: 122 LCTRIITMYAMCGSPDDSRFVFDAL--RSKNLFQWNAVISSYSRNELYDEVLETFIEMIS 181
Query: 224 RLGWLPDHYTFPFVLKACGEIPSFRRGASVHAIVCANGFESNVFICNSIVAMYGRCGALD 283
LPDH+T+P V+KAC + G +VH +V G +VF+ N++V+ YG G +
Sbjct: 182 TTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVT 241
Query: 284 DARQVFNEVLERKIEDIVSWNSILAAYVQGGESRTA-LRVALRMANHYSSKLRPDAITLV 343
DA Q+F+ + ER ++VSWNS++ + G S + L + M + PD TLV
Sbjct: 242 DALQLFDIMPER---NLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLV 301
Query: 344 NILPACASAFAPQHGKQVHGFSVRSGLVDDVFVGNALVDMYAKCSKMNEANKVFERMKEK 403
+LP CA GK VHG++V+ L ++ + NAL+DMY+KC + A +F+ K
Sbjct: 302 TVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 361
Query: 404 DVVSWNAMVTGYSQIGSFDSALSLFKRMQE--EDIELNVVT------------------- 463
+VVSWN MV G+S G + ++M ED++ + VT
Sbjct: 362 NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKE 421
Query: 464 -----------------------------------------------WSAVIAGYAQRGH 523
W+A+I G+AQ
Sbjct: 422 LHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND 481
Query: 524 GFEALDVFRQMQLCGWEPNVVTLVSLLSGCASVGALLHGKQTHAYAIKNILNLDWSDPGG 583
+LD QM++ G P+ T+ SLLS C+ + +L GK+ H + I+N L
Sbjct: 482 PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLE-------R 541
Query: 584 DLMVLNGLIDMYAKCKSYKVARNIFDLIAGKDKNVVTWTVLIGGYAQHGEANDALELFAQ 643
DL V ++ +Y C + +FD A +DK++V+W +I GY Q+G + AL +F Q
Sbjct: 542 DLFVYLSVLSLYIHCGELCTVQALFD--AMEDKSLVSWNTVITGYLQNGFPDRALGVFRQ 601
Query: 644 IFKQETSLKPNAFTLSCALMACARLGALRLGRQLHAYALRHENGSEVLFVANCLIDMYSK 703
+ L ++ AC+ L +LRLGR+ HAYAL+H + F+A LIDMY+K
Sbjct: 602 MVLYGIQL--CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDA-FIACSLIDMYAK 661
Query: 704 SGDIDAAQAVFDNMKVRNAVSWTSLMTGYGMHGRGEEALHVFHQMRQAGFVIDGVTFLVV 763
+G I + VF+ +K ++ SW +++ GYG+HG +EA+ +F +M++ G D +TFL V
Sbjct: 662 NGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGV 721
Query: 764 LYACSHSGMVDQGMDYFHGMIKCFGVTPGAEHYACMVDLLGRAGRFNEAMELI-KSMPME 823
L AC+HSG++ +G+ Y M FG+ P +HYAC++D+LGRAG+ ++A+ ++ + M E
Sbjct: 722 LTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEE 781
Query: 824 PTAVVWVALLSASRIHANIELGEYAASRLLESGAENDGSYTLLSNLYANARRWKDVARIR 883
+W +LLS+ RIH N+E+GE A++L E E +Y LLSNLYA +W+DV ++R
Sbjct: 782 ADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVR 841
Query: 884 SLMKNTGIKKRPGCSWIQGKKTTTTFFVGDRSHPESDQIYNLLSELIKQIKDMGYVPQTS 943
M ++K GCSWI+ + +F VG+R ++I +L S L +I MGY P T
Sbjct: 842 QRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTM 901
Query: 944 FALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLRICGDCHSALTYISMII 959
HD+ +EEK + L HSEKLA+ YG++ ++ G IR+ KNLRIC DCH+A IS ++
Sbjct: 902 SVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVM 961
BLAST of HG10006016 vs. ExPASy TrEMBL
Match:
A0A1S3C0G3 (pentatricopeptide repeat-containing protein At5g16860 OS=Cucumis melo OX=3656 GN=LOC103495413 PE=3 SV=1)
HSP 1 Score: 1587.8 bits (4110), Expect = 0.0e+00
Identity = 770/857 (89.85%), Postives = 820/857 (95.68%), Query Frame = 0
Query: 102 SVMIHHHCGSFLSRILTTLVQFYSTSTTSPPTIPFTSLLRQCRTLINAKLAHQQIFVNGF 161
+VMIH CGS+LSRIL T V FYST TTSPPTIP SLLRQC+TLINAKLAHQQIFV+GF
Sbjct: 12 NVMIHPRCGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGF 71
Query: 162 TEMATYAVGAYIECGAFAEAVSLLQRLIPSHSTVFWWNALIRRSVRLGFLDDALGFYCQM 221
TEM +YAVGAYIECGA AEAVSLLQR+IPSHSTVFWWNALIRRSVRLG LDD LGFYCQM
Sbjct: 72 TEMFSYAVGAYIECGASAEAVSLLQRIIPSHSTVFWWNALIRRSVRLGLLDDTLGFYCQM 131
Query: 222 QRLGWLPDHYTFPFVLKACGEIPSFRRGASVHAIVCANGFESNVFICNSIVAMYGRCGAL 281
Q LGWLPDHYTFPFVLKACGEIPSFR GASVHA+VCA GFESNVFICNSIVAMYGRCGAL
Sbjct: 132 QSLGWLPDHYTFPFVLKACGEIPSFRHGASVHAVVCAKGFESNVFICNSIVAMYGRCGAL 191
Query: 282 DDARQVFNEVLERKIEDIVSWNSILAAYVQGGESRTALRVALRMANHYSSKLRPDAITLV 341
DDARQ+F+EVLER+IEDIVSWNSILAAYVQGG+SRTALR+A +M NHYS KLRPDAITLV
Sbjct: 192 DDARQMFDEVLERRIEDIVSWNSILAAYVQGGKSRTALRIAFQMGNHYSLKLRPDAITLV 251
Query: 342 NILPACASAFAPQHGKQVHGFSVRSGLVDDVFVGNALVDMYAKCSKMNEANKVFERMKEK 401
NILPACAS FA QHGKQVHGFSVRSGLVDDVFVGNALV MYAKCSKMNEANKVFER+K+K
Sbjct: 252 NILPACASIFAIQHGKQVHGFSVRSGLVDDVFVGNALVSMYAKCSKMNEANKVFERIKKK 311
Query: 402 DVVSWNAMVTGYSQIGSFDSALSLFKRMQEEDIELNVVTWSAVIAGYAQRGHGFEALDVF 461
DVVSWNAMVTGYSQIGSFDSALSLFK MQEEDI+L+V+TWSAVIAGYAQ+GHGFEALDVF
Sbjct: 312 DVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVF 371
Query: 462 RQMQLCGWEPNVVTLVSLLSGCASVGALLHGKQTHAYAIKNILNLDWSDPGGDLMVLNGL 521
RQMQL G EPNVVTLVSLLSGCASVGALL+GKQTHAY IKNILNL+WSD G D++VLNGL
Sbjct: 372 RQMQLYGLEPNVVTLVSLLSGCASVGALLYGKQTHAYVIKNILNLNWSDKGDDMLVLNGL 431
Query: 522 IDMYAKCKSYKVARNIFDLIAGKDKNVVTWTVLIGGYAQHGEANDALELFAQIFKQETSL 581
IDMYAKCKSY+VARNIFD IAGKDK+VVTWTV+IGGYAQHGEANDAL+LFAQIF+Q+TSL
Sbjct: 432 IDMYAKCKSYRVARNIFDSIAGKDKDVVTWTVMIGGYAQHGEANDALQLFAQIFEQKTSL 491
Query: 582 KPNAFTLSCALMACARLGALRLGRQLHAYALRHENGSEVLFVANCLIDMYSKSGDIDAAQ 641
KPNAFTLSCALMACARLG LRLGRQLHAYALR+EN SEVL+VANCLIDMYSKSGDIDAA+
Sbjct: 492 KPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVANCLIDMYSKSGDIDAAR 551
Query: 642 AVFDNMKVRNAVSWTSLMTGYGMHGRGEEALHVFHQMRQAGFVIDGVTFLVVLYACSHSG 701
AVF+NMK+RN VSWTSLMTGYGMHGRGEEALHVF QMRQ GFV+DG+TFLVVLYACSHSG
Sbjct: 552 AVFNNMKLRNVVSWTSLMTGYGMHGRGEEALHVFDQMRQLGFVVDGITFLVVLYACSHSG 611
Query: 702 MVDQGMDYFHGMIKCFGVTPGAEHYACMVDLLGRAGRFNEAMELIKSMPMEPTAVVWVAL 761
+VDQGM+YFH M+KCFG+TPGAEHYACMVDLLGRAGR NEAMELIKSM MEPTAVVWVAL
Sbjct: 612 LVDQGMNYFHDMVKCFGITPGAEHYACMVDLLGRAGRLNEAMELIKSMSMEPTAVVWVAL 671
Query: 762 LSASRIHANIELGEYAASRLLESGAENDGSYTLLSNLYANARRWKDVARIRSLMKNTGIK 821
LSASRIHANIELGEYAAS+L+E GAENDGSYTLLSNLYANARRWKDVARIRSLMK+TGI+
Sbjct: 672 LSASRIHANIELGEYAASKLIELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIR 731
Query: 822 KRPGCSWIQGKKTTTTFFVGDRSHPESDQIYNLLSELIKQIKDMGYVPQTSFALHDVDDE 881
KRPGCSWIQGKK+TTTFFVGDRSHPES+QIYNLLS+LIK+IKDMGYVPQTSFALHDVDDE
Sbjct: 732 KRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLSDLIKRIKDMGYVPQTSFALHDVDDE 791
Query: 882 EKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLRICGDCHSALTYISMIIDHEIILRDS 941
EKGDLLFEHSEKLAVAYGILT+APGQPIRI+KNLRICGDCHSALTYISMIIDHEIILRDS
Sbjct: 792 EKGDLLFEHSEKLAVAYGILTTAPGQPIRIHKNLRICGDCHSALTYISMIIDHEIILRDS 851
Query: 942 SRFHHFKKGSCSCRSYW 959
SRFHHFKKGSCSCRSYW
Sbjct: 852 SRFHHFKKGSCSCRSYW 868
BLAST of HG10006016 vs. ExPASy TrEMBL
Match:
A0A6J1CPQ5 (pentatricopeptide repeat-containing protein At5g16860 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013040 PE=3 SV=1)
HSP 1 Score: 1562.4 bits (4044), Expect = 0.0e+00
Identity = 759/855 (88.77%), Postives = 805/855 (94.15%), Query Frame = 0
Query: 104 MIHHHCGSFLSRILTTLVQFYSTSTTSPPTIPFTSLLRQCRTLINAKLAHQQIFVNGFTE 163
MIHH C S++SRIL + V YSTS TS IP SLL+QCRTLINAKLAHQQI VNGFT+
Sbjct: 1 MIHHSCASYVSRILPSSVPCYSTSATS---IPLISLLQQCRTLINAKLAHQQILVNGFTQ 60
Query: 164 MATYAVGAYIECGAFAEAVSLLQRLIPSHSTVFWWNALIRRSVRLGFLDDALGFYCQMQR 223
M TYA+GAYIECGA A+AVSLLQRLIPSHSTVFWWNALIRRSVRLGFLDD LGFYCQMQR
Sbjct: 61 MVTYAIGAYIECGASAQAVSLLQRLIPSHSTVFWWNALIRRSVRLGFLDDVLGFYCQMQR 120
Query: 224 LGWLPDHYTFPFVLKACGEIPSFRRGASVHAIVCANGFESNVFICNSIVAMYGRCGALDD 283
LGW PDHYTFPFVLKACGEIPSFRRGASVHA+VCANGFESNVFICNSIVAMYGRCGALDD
Sbjct: 121 LGWSPDHYTFPFVLKACGEIPSFRRGASVHAVVCANGFESNVFICNSIVAMYGRCGALDD 180
Query: 284 ARQVFNEVLERKIEDIVSWNSILAAYVQGGESRTALRVALRMANHYSSKLRPDAITLVNI 343
ARQVF+EVLERKIEDIVSWNSILAAYVQGGES+TALR+A+RMANHY+ KL PDAITLVNI
Sbjct: 181 ARQVFDEVLERKIEDIVSWNSILAAYVQGGESKTALRIAVRMANHYNCKLLPDAITLVNI 240
Query: 344 LPACASAFAPQHGKQVHGFSVRSGLVDDVFVGNALVDMYAKCSKMNEANKVFERMKEKDV 403
LPACAS APQHGKQVHG++VRSGLVDDVFVGNALVDMYAKC KM+EA++VFE MKEKDV
Sbjct: 241 LPACASTLAPQHGKQVHGYAVRSGLVDDVFVGNALVDMYAKCWKMDEASRVFELMKEKDV 300
Query: 404 VSWNAMVTGYSQIGSFDSALSLFKRMQEEDIELNVVTWSAVIAGYAQRGHGFEALDVFRQ 463
VSWNAMVTGYSQI FD ALSLFKRMQEEDIELNVVTWSA+IAGY+QRG GFEALDVFRQ
Sbjct: 301 VSWNAMVTGYSQISRFDDALSLFKRMQEEDIELNVVTWSALIAGYSQRGLGFEALDVFRQ 360
Query: 464 MQLCGWEPNVVTLVSLLSGCASVGALLHGKQTHAYAIKNILNLDWSDPGGDLMVLNGLID 523
MQLCG EPNVVTLVSLLSGCASVGALLHGKQTHAYAIKNILN DW+DPG DLMVLNGLID
Sbjct: 361 MQLCGLEPNVVTLVSLLSGCASVGALLHGKQTHAYAIKNILNFDWNDPGDDLMVLNGLID 420
Query: 524 MYAKCKSYKVARNIFDLIAGKDKNVVTWTVLIGGYAQHGEANDALELFAQIFKQETSLKP 583
MYAKCKS KVARNIFDLI K+KNVVTWTV+IGGYAQHGEANDALELF+Q+FK ETSLKP
Sbjct: 421 MYAKCKSSKVARNIFDLITRKNKNVVTWTVMIGGYAQHGEANDALELFSQMFKHETSLKP 480
Query: 584 NAFTLSCALMACARLGALRLGRQLHAYALRHENGSEVLFVANCLIDMYSKSGDIDAAQAV 643
NAFTLSCALMACARLGALRLGRQ+HAYALRHEN +EVL+VANCLIDMYSKSGDIDAAQ V
Sbjct: 481 NAFTLSCALMACARLGALRLGRQIHAYALRHENENEVLYVANCLIDMYSKSGDIDAAQTV 540
Query: 644 FDNMKVRNAVSWTSLMTGYGMHGRGEEALHVFHQMRQAGFVIDGVTFLVVLYACSHSGMV 703
FDNMKVRNAVSWTSLMTGYGMHGRGEEALH+F QM+QA +DGVTFLVVLYACSHSGMV
Sbjct: 541 FDNMKVRNAVSWTSLMTGYGMHGRGEEALHIFDQMQQADLAVDGVTFLVVLYACSHSGMV 600
Query: 704 DQGMDYFHGMIKCFGVTPGAEHYACMVDLLGRAGRFNEAMELIKSMPMEPTAVVWVALLS 763
DQGM+YFHGMIK FGV PGAEHYACMVDLLGRAGR NEAMELIKSM EPTAVVWVALLS
Sbjct: 601 DQGMNYFHGMIKYFGVAPGAEHYACMVDLLGRAGRLNEAMELIKSMSTEPTAVVWVALLS 660
Query: 764 ASRIHANIELGEYAASRLLESGAENDGSYTLLSNLYANARRWKDVARIRSLMKNTGIKKR 823
ASRIHAN+ELGEYAA++L+ESG ENDGSYTLLSNLYANARRWKDVARIRSLMK+TGIKKR
Sbjct: 661 ASRIHANVELGEYAANKLIESGLENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIKKR 720
Query: 824 PGCSWIQGKKTTTTFFVGDRSHPESDQIYNLLSELIKQIKDMGYVPQTSFALHDVDDEEK 883
PGCSW+QGKK TTTFFVGDRSHP+SDQIY +L++LI++IKDMGYVPQTSFALHDVDDEEK
Sbjct: 721 PGCSWVQGKKGTTTFFVGDRSHPQSDQIYGILADLIQRIKDMGYVPQTSFALHDVDDEEK 780
Query: 884 GDLLFEHSEKLAVAYGILTSAPGQPIRINKNLRICGDCHSALTYISMIIDHEIILRDSSR 943
GDLLFEHSEKLAVAYGILTS+PGQPIRINKNLRICGDCHSALTYISMII+HEIILRDSSR
Sbjct: 781 GDLLFEHSEKLAVAYGILTSSPGQPIRINKNLRICGDCHSALTYISMIIEHEIILRDSSR 840
Query: 944 FHHFKKGSCSCRSYW 959
FHHFK GSCSCR YW
Sbjct: 841 FHHFKNGSCSCRGYW 852
BLAST of HG10006016 vs. ExPASy TrEMBL
Match:
A0A5A7SK77 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002350 PE=3 SV=1)
HSP 1 Score: 1547.3 bits (4005), Expect = 0.0e+00
Identity = 753/839 (89.75%), Postives = 802/839 (95.59%), Query Frame = 0
Query: 104 MIHHHCGSFLSRILTTLVQFYSTSTTSPPTIPFTSLLRQCRTLINAKLAHQQIFVNGFTE 163
MIH CGS+LSRIL T V FYST TTSPPTIP SLLRQC+TLINAKLAHQQIFV+GFTE
Sbjct: 1 MIHPRCGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTE 60
Query: 164 MATYAVGAYIECGAFAEAVSLLQRLIPSHSTVFWWNALIRRSVRLGFLDDALGFYCQMQR 223
M +YAVGAYIECGA AEAVSLLQR+IPSHSTVFWWNALIRRSVRLG LDD LGFYCQMQ
Sbjct: 61 MFSYAVGAYIECGASAEAVSLLQRIIPSHSTVFWWNALIRRSVRLGLLDDTLGFYCQMQS 120
Query: 224 LGWLPDHYTFPFVLKACGEIPSFRRGASVHAIVCANGFESNVFICNSIVAMYGRCGALDD 283
LGWLPDHYTFPFVLKACGEIPSFR GASVHA+VCA GFESNVFICNSIVAMYGRCGALDD
Sbjct: 121 LGWLPDHYTFPFVLKACGEIPSFRHGASVHAVVCAKGFESNVFICNSIVAMYGRCGALDD 180
Query: 284 ARQVFNEVLERKIEDIVSWNSILAAYVQGGESRTALRVALRMANHYSSKLRPDAITLVNI 343
ARQ+F+EVLER+IEDIVSWNSILAAYVQGG+SRTALR+A +M NHYS KLRPDAITLVNI
Sbjct: 181 ARQMFDEVLERRIEDIVSWNSILAAYVQGGKSRTALRIAFQMGNHYSLKLRPDAITLVNI 240
Query: 344 LPACASAFAPQHGKQVHGFSVRSGLVDDVFVGNALVDMYAKCSKMNEANKVFERMKEKDV 403
LPACAS FA QHGKQVHGFSVRSGLVDDVFVGNALV MYAKCSKMNEANKVFER+K+KDV
Sbjct: 241 LPACASIFAIQHGKQVHGFSVRSGLVDDVFVGNALVSMYAKCSKMNEANKVFERIKKKDV 300
Query: 404 VSWNAMVTGYSQIGSFDSALSLFKRMQEEDIELNVVTWSAVIAGYAQRGHGFEALDVFRQ 463
VSWNAMVTGYSQIGSFDSALSLFK MQEEDI+L+V+TWSAVIAGYAQ+GHGFEALDVFRQ
Sbjct: 301 VSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQ 360
Query: 464 MQLCGWEPNVVTLVSLLSGCASVGALLHGKQTHAYAIKNILNLDWSDPGGDLMVLNGLID 523
MQL G EPNVVTLVSLLSGCASVGALL+GKQTHAY IKNILNL+WSD G D++VLNGLID
Sbjct: 361 MQLYGLEPNVVTLVSLLSGCASVGALLYGKQTHAYVIKNILNLNWSDKGDDMLVLNGLID 420
Query: 524 MYAKCKSYKVARNIFDLIAGKDKNVVTWTVLIGGYAQHGEANDALELFAQIFKQETSLKP 583
MYAKCKSY+VARNIFD IAGKDK+VVTWTV+IGGYAQHGEANDAL+LFAQIF+Q+TSLKP
Sbjct: 421 MYAKCKSYRVARNIFDSIAGKDKDVVTWTVMIGGYAQHGEANDALQLFAQIFEQKTSLKP 480
Query: 584 NAFTLSCALMACARLGALRLGRQLHAYALRHENGSEVLFVANCLIDMYSKSGDIDAAQAV 643
NAFTLSCALMACARLG LRLGRQLHAYALR+EN SEVL+VANCLIDMYSKSGDIDAA+AV
Sbjct: 481 NAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVANCLIDMYSKSGDIDAARAV 540
Query: 644 FDNMKVRNAVSWTSLMTGYGMHGRGEEALHVFHQMRQAGFVIDGVTFLVVLYACSHSGMV 703
F+NMK+RN VSWTSLMTGYGMHGRGEEALHVF QMRQ GFV+DG+TFLVVLYACSHSG+V
Sbjct: 541 FNNMKLRNVVSWTSLMTGYGMHGRGEEALHVFDQMRQLGFVVDGITFLVVLYACSHSGLV 600
Query: 704 DQGMDYFHGMIKCFGVTPGAEHYACMVDLLGRAGRFNEAMELIKSMPMEPTAVVWVALLS 763
DQGM+YFH M+KCFG+TPGAEHYACMVDLLGRAGR NEAMELIKSM MEPTAVVWVALLS
Sbjct: 601 DQGMNYFHDMVKCFGITPGAEHYACMVDLLGRAGRLNEAMELIKSMSMEPTAVVWVALLS 660
Query: 764 ASRIHANIELGEYAASRLLESGAENDGSYTLLSNLYANARRWKDVARIRSLMKNTGIKKR 823
ASRIHANIELGEYAAS+L+E GAENDGSYTLLSNLYANARRWKDVARIRSLMK+TGI+KR
Sbjct: 661 ASRIHANIELGEYAASKLIELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKR 720
Query: 824 PGCSWIQGKKTTTTFFVGDRSHPESDQIYNLLSELIKQIKDMGYVPQTSFALHDVDDEEK 883
PGCSWIQGKK+TTTFFVGDRSHPES+QIYNLLS+LIK+IKDMGYVPQTSFALHDVDDEEK
Sbjct: 721 PGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLSDLIKRIKDMGYVPQTSFALHDVDDEEK 780
Query: 884 GDLLFEHSEKLAVAYGILTSAPGQPIRINKNLRICGDCHSALTYISMIIDHEIILRDSS 943
GDLLFEHSEKLAVAYGILT+APGQPIRI+KNLRICGDCHSALTYISMIIDHEIILRDSS
Sbjct: 781 GDLLFEHSEKLAVAYGILTTAPGQPIRIHKNLRICGDCHSALTYISMIIDHEIILRDSS 839
BLAST of HG10006016 vs. ExPASy TrEMBL
Match:
A0A6J1H912 (pentatricopeptide repeat-containing protein At5g16860 OS=Cucurbita moschata OX=3662 GN=LOC111461191 PE=3 SV=1)
HSP 1 Score: 1513.0 bits (3916), Expect = 0.0e+00
Identity = 728/821 (88.67%), Postives = 777/821 (94.64%), Query Frame = 0
Query: 138 SLLRQCRTLINAKLAHQQIFVNGFTEMATYAVGAYIECGAFAEAVSLLQRLIPSHSTVFW 197
S L+QCRTLI+AKL HQQI VNGFT++ T+A+G YIEC AF +AVSLL+RL+PSHSTVFW
Sbjct: 2 SFLKQCRTLIDAKLVHQQILVNGFTDLVTHAIGGYIECNAFGQAVSLLERLVPSHSTVFW 61
Query: 198 WNALIRRSVRLGFLDDALGFYCQMQRLGWLPDHYTFPFVLKACGEIPSFRRGASVHAIVC 257
WNALIRRSVRLGFLDDAL FY QMQRLGW PDHYTFPFVLKACGE SFR G SVHA+VC
Sbjct: 62 WNALIRRSVRLGFLDDALCFYRQMQRLGWWPDHYTFPFVLKACGEKLSFRCGTSVHAMVC 121
Query: 258 ANGFESNVFICNSIVAMYGRCGALDDARQVFNEVLERKIEDIVSWNSILAAYVQGGESRT 317
A GFESNVFICNS+VAMYGRCGALDDARQVF+EVLERKI+DIVSWNSILAAYVQGGES+
Sbjct: 122 AYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESKA 181
Query: 318 ALRVALRMANHYSSKLRPDAITLVNILPACASAFAPQHGKQVHGFSVRSGLVDDVFVGNA 377
ALR+A +MA HY+ KLRPDAITLVN+LPACAS FA QHG+QVHGF+VRSGLVDDVFVGNA
Sbjct: 182 ALRIAFQMAKHYNFKLRPDAITLVNVLPACASTFATQHGRQVHGFAVRSGLVDDVFVGNA 241
Query: 378 LVDMYAKCSKMNEANKVFERMKEKDVVSWNAMVTGYSQIGSFDSALSLFKRMQEEDIELN 437
LVDMYAKCSKMNEANKVFE+MKEKDVVSWNA+VTGYSQIGSFD ALSLFKRMQEEDIELN
Sbjct: 242 LVDMYAKCSKMNEANKVFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIELN 301
Query: 438 VVTWSAVIAGYAQRGHGFEALDVFRQMQLCGWEPNVVTLVSLLSGCASVGALLHGKQTHA 497
VVTWSAVIAGY+QRGHG EALDVFRQMQ CG EPNVVTLVSLLSGCASVGALLHGKQTHA
Sbjct: 302 VVTWSAVIAGYSQRGHGCEALDVFRQMQHCGLEPNVVTLVSLLSGCASVGALLHGKQTHA 361
Query: 498 YAIKNILNLDWSDPGGDLMVLNGLIDMYAKCKSYKVARNIFDLIAGKDKNVVTWTVLIGG 557
YAIKNILNLDWSDPG D+MV NGLIDMYAKCKS +VARNIFD I GKDKNVVTWTV+IGG
Sbjct: 362 YAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARNIFDSIIGKDKNVVTWTVMIGG 421
Query: 558 YAQHGEANDALELFAQIFKQETSLKPNAFTLSCALMACARLGALRLGRQLHAYALRHENG 617
YAQHGEANDA+ELF+Q+FKQETSLKPNAFTLSCALMACARLGALRLG+Q+HAYALRHEN
Sbjct: 422 YAQHGEANDAVELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHENE 481
Query: 618 SEVLFVANCLIDMYSKSGDIDAAQAVFDNMKVRNAVSWTSLMTGYGMHGRGEEALHVFHQ 677
SEVL VANCLIDMYSKSGDIDAAQ VFDNMKVRNAVSWTSLMTGYG+HGRGEEAL VF+Q
Sbjct: 482 SEVLHVANCLIDMYSKSGDIDAAQIVFDNMKVRNAVSWTSLMTGYGIHGRGEEALRVFNQ 541
Query: 678 MRQAGFVIDGVTFLVVLYACSHSGMVDQGMDYFHGMIKCFGVTPGAEHYACMVDLLGRAG 737
MRQ G +DGVTFLVVLYACSHSGMVDQGM+YFHGM+K FGV PGAEHYACMVDLLGRAG
Sbjct: 542 MRQVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKYFGVAPGAEHYACMVDLLGRAG 601
Query: 738 RFNEAMELIKSMPMEPTAVVWVALLSASRIHANIELGEYAASRLLESGAENDGSYTLLSN 797
R NEAMELIKSMPMEPT VVWVALLSASR HAN+ELGEYAAS+L+ESGAENDGSYTLLSN
Sbjct: 602 RLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLMESGAENDGSYTLLSN 661
Query: 798 LYANARRWKDVARIRSLMKNTGIKKRPGCSWIQGKKTTTTFFVGDRSHPESDQIYNLLSE 857
LYANARRWKDVARIR LMK+TGIKKRPGCSW+QGKK+TTTFFVGD+SHP+SDQIYN+LS+
Sbjct: 662 LYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILSD 721
Query: 858 LIKQIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLRI 917
LI++IKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLRI
Sbjct: 722 LIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLRI 781
Query: 918 CGDCHSALTYISMIIDHEIILRDSSRFHHFKKGSCSCRSYW 959
CGDCHSALTYISMII+HEIILRDSSRFHHFKKGSCSCR YW
Sbjct: 782 CGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 822
BLAST of HG10006016 vs. ExPASy TrEMBL
Match:
A0A6J1KUL7 (pentatricopeptide repeat-containing protein At5g16860 OS=Cucurbita maxima OX=3661 GN=LOC111497759 PE=3 SV=1)
HSP 1 Score: 1501.5 bits (3886), Expect = 0.0e+00
Identity = 720/821 (87.70%), Postives = 778/821 (94.76%), Query Frame = 0
Query: 138 SLLRQCRTLINAKLAHQQIFVNGFTEMATYAVGAYIECGAFAEAVSLLQRLIPSHSTVFW 197
S L+QCRTLI+AKL HQQI VNGFT++ T+A+G YIEC AFA+AVSLL+RL+PSHS VFW
Sbjct: 2 SFLKQCRTLIDAKLVHQQILVNGFTDLVTHAIGGYIECNAFAQAVSLLERLVPSHSAVFW 61
Query: 198 WNALIRRSVRLGFLDDALGFYCQMQRLGWLPDHYTFPFVLKACGEIPSFRRGASVHAIVC 257
WNALIRRSVRLGFLDDAL FY QM+RLGW PD+YTFPFVLKACGE SFR GASVHA+VC
Sbjct: 62 WNALIRRSVRLGFLDDALCFYRQMERLGWSPDYYTFPFVLKACGEKLSFRCGASVHAMVC 121
Query: 258 ANGFESNVFICNSIVAMYGRCGALDDARQVFNEVLERKIEDIVSWNSILAAYVQGGESRT 317
A GFESNVFICNS+VAMYGRCGALDDARQVF+EVLERKI+DIVSWNSILAAYVQGGES+
Sbjct: 122 AYGFESNVFICNSVVAMYGRCGALDDARQVFDEVLERKIDDIVSWNSILAAYVQGGESKA 181
Query: 318 ALRVALRMANHYSSKLRPDAITLVNILPACASAFAPQHGKQVHGFSVRSGLVDDVFVGNA 377
ALR+A +MA HY+ KL PDAITLVN+LPACAS FA +HG+QVHGF+VRSGLVDDVFVGNA
Sbjct: 182 ALRIAFQMAKHYNFKLFPDAITLVNVLPACASTFATEHGRQVHGFAVRSGLVDDVFVGNA 241
Query: 378 LVDMYAKCSKMNEANKVFERMKEKDVVSWNAMVTGYSQIGSFDSALSLFKRMQEEDIELN 437
LVDMYAKCSKMNEANK+FE+MKEKDVVSWNA+VTGYSQIGSFD ALSLFKRMQEEDIELN
Sbjct: 242 LVDMYAKCSKMNEANKMFEQMKEKDVVSWNALVTGYSQIGSFDDALSLFKRMQEEDIELN 301
Query: 438 VVTWSAVIAGYAQRGHGFEALDVFRQMQLCGWEPNVVTLVSLLSGCASVGALLHGKQTHA 497
VVTWSAVIAGY+QRGHG EALDVFRQMQ CG EPNVVTLVSLLSGCASVGALLHGKQTHA
Sbjct: 302 VVTWSAVIAGYSQRGHGCEALDVFRQMQNCGLEPNVVTLVSLLSGCASVGALLHGKQTHA 361
Query: 498 YAIKNILNLDWSDPGGDLMVLNGLIDMYAKCKSYKVARNIFDLIAGKDKNVVTWTVLIGG 557
YAIKNILNLDWSDPG D+MV NGLIDMYAKCKS +VAR+IFD I GKDKNVVTWTV+IGG
Sbjct: 362 YAIKNILNLDWSDPGDDMMVFNGLIDMYAKCKSSRVARSIFDSIIGKDKNVVTWTVMIGG 421
Query: 558 YAQHGEANDALELFAQIFKQETSLKPNAFTLSCALMACARLGALRLGRQLHAYALRHENG 617
YAQHGEANDA+ELF+Q+FKQETSLKPNAFTLSCALMACARLGALRLG+Q+HAYALRHEN
Sbjct: 422 YAQHGEANDAIELFSQMFKQETSLKPNAFTLSCALMACARLGALRLGKQIHAYALRHENE 481
Query: 618 SEVLFVANCLIDMYSKSGDIDAAQAVFDNMKVRNAVSWTSLMTGYGMHGRGEEALHVFHQ 677
SEVL+VANCLIDMYSKSGDIDAAQ VFDNMKV+NAVSWTSLMTGYG+HGRGEEAL VF+Q
Sbjct: 482 SEVLYVANCLIDMYSKSGDIDAAQIVFDNMKVQNAVSWTSLMTGYGIHGRGEEALRVFNQ 541
Query: 678 MRQAGFVIDGVTFLVVLYACSHSGMVDQGMDYFHGMIKCFGVTPGAEHYACMVDLLGRAG 737
MR+ G +DGVTFLVVLYACSHSGMVDQGM+YFHGM+K FGV PGAEHYACMVDLLGRAG
Sbjct: 542 MREVGLSVDGVTFLVVLYACSHSGMVDQGMNYFHGMVKYFGVAPGAEHYACMVDLLGRAG 601
Query: 738 RFNEAMELIKSMPMEPTAVVWVALLSASRIHANIELGEYAASRLLESGAENDGSYTLLSN 797
R NEAMELIKSMPMEPT VVWVALLSASR HAN+ELGEYAAS+L+ESGAENDGSYTLLSN
Sbjct: 602 RLNEAMELIKSMPMEPTPVVWVALLSASRTHANVELGEYAASKLIESGAENDGSYTLLSN 661
Query: 798 LYANARRWKDVARIRSLMKNTGIKKRPGCSWIQGKKTTTTFFVGDRSHPESDQIYNLLSE 857
LYANARRWKDVARIR LMK+TGIKKRPGCSW+QGKK+TTTFFVGD+SHP+SDQIYN+L++
Sbjct: 662 LYANARRWKDVARIRRLMKHTGIKKRPGCSWVQGKKSTTTFFVGDKSHPQSDQIYNILAD 721
Query: 858 LIKQIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLRI 917
LI++IKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLRI
Sbjct: 722 LIQRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLRI 781
Query: 918 CGDCHSALTYISMIIDHEIILRDSSRFHHFKKGSCSCRSYW 959
CGDCHSALTYISMII+HEIILRDSSRFHHFKKGSCSCR YW
Sbjct: 782 CGDCHSALTYISMIIEHEIILRDSSRFHHFKKGSCSCRGYW 822
BLAST of HG10006016 vs. TAIR 10
Match:
AT5G16860.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 1034.2 bits (2673), Expect = 6.4e-302
Identity = 498/834 (59.71%), Postives = 630/834 (75.54%), Query Frame = 0
Query: 127 STTSPPTIPFTSLLRQCRTLINAKLAHQQIFVNGF--TEMATYAVGAYIECGAFAEAVSL 186
ST++P P + +C+T+ KL HQ++ G + ++ + YI G + AVSL
Sbjct: 24 STSAPEITP--PFIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSL 83
Query: 187 LQRLIPSHSTVFWWNALIRRSVRLGFLDDALGFYCQMQRLGWLPDHYTFPFVLKACGEIP 246
L+R PS + V+ WN+LIR G + L + M L W PD+YTFPFV KACGEI
Sbjct: 84 LRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEIS 143
Query: 247 SFRRGASVHAIVCANGFESNVFICNSIVAMYGRCGALDDARQVFNEVLERKIEDIVSWNS 306
S R G S HA+ GF SNVF+ N++VAMY RC +L DAR+VF+E+ + D+VSWNS
Sbjct: 144 SVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM---SVWDVVSWNS 203
Query: 307 ILAAYVQGGESRTALRVALRMANHYSSKLRPDAITLVNILPACASAFAPQHGKQVHGFSV 366
I+ +Y + G+ + AL + RM N + RPD ITLVN+LP CAS GKQ+H F+V
Sbjct: 204 IIESYAKLGKPKVALEMFSRMTNEFG--CRPDNITLVNVLPPCASLGTHSLGKQLHCFAV 263
Query: 367 RSGLVDDVFVGNALVDMYAKCSKMNEANKVFERMKEKDVVSWNAMVTGYSQIGSFDSALS 426
S ++ ++FVGN LVDMYAKC M+EAN VF M KDVVSWNAMV GYSQIG F+ A+
Sbjct: 264 TSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVR 323
Query: 427 LFKRMQEEDIELNVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGWEPNVVTLVSLLSGCA 486
LF++MQEE I+++VVTWSA I+GYAQRG G+EAL V RQM G +PN VTL+S+LSGCA
Sbjct: 324 LFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA 383
Query: 487 SVGALLHGKQTHAYAIKNILNLDWSDPGGDLMVLNGLIDMYAKCKSYKVARNIFDLIAGK 546
SVGAL+HGK+ H YAIK ++L + G + MV+N LIDMYAKCK AR +FD ++ K
Sbjct: 384 SVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPK 443
Query: 547 DKNVVTWTVLIGGYAQHGEANDALELFAQIFKQETSLKPNAFTLSCALMACARLGALRLG 606
+++VVTWTV+IGGY+QHG+AN ALEL +++F+++ +PNAFT+SCAL+ACA L ALR+G
Sbjct: 444 ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIG 503
Query: 607 RQLHAYALRHENGSEVLFVANCLIDMYSKSGDIDAAQAVFDNMKVRNAVSWTSLMTGYGM 666
+Q+HAYALR++ + LFV+NCLIDMY+K G I A+ VFDNM +N V+WTSLMTGYGM
Sbjct: 504 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGM 563
Query: 667 HGRGEEALHVFHQMRQAGFVIDGVTFLVVLYACSHSGMVDQGMDYFHGMIKCFGVTPGAE 726
HG GEEAL +F +MR+ GF +DGVT LVVLYACSHSGM+DQGM+YF+ M FGV+PG E
Sbjct: 564 HGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPE 623
Query: 727 HYACMVDLLGRAGRFNEAMELIKSMPMEPTAVVWVALLSASRIHANIELGEYAASRLLES 786
HYAC+VDLLGRAGR N A+ LI+ MPMEP VVWVA LS RIH +ELGEYAA ++ E
Sbjct: 624 HYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITEL 683
Query: 787 GAENDGSYTLLSNLYANARRWKDVARIRSLMKNTGIKKRPGCSWIQGKKTTTTFFVGDRS 846
+ +DGSYTLLSNLYANA RWKDV RIRSLM++ G+KKRPGCSW++G K TTTFFVGD++
Sbjct: 684 ASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKT 743
Query: 847 HPESDQIYNLLSELIKQIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSA 906
HP + +IY +L + +++IKD+GYVP+T FALHDVDDEEK DLLFEHSEKLA+AYGILT+
Sbjct: 744 HPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTP 803
Query: 907 PGQPIRINKNLRICGDCHSALTYISMIIDHEIILRDSSRFHHFKKGSCSCRSYW 959
G IRI KNLR+CGDCH+A TY+S IIDH+IILRDSSRFHHFK GSCSC+ YW
Sbjct: 804 QGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
BLAST of HG10006016 vs. TAIR 10
Match:
AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 550.4 bits (1417), Expect = 2.8e-156
Identity = 302/827 (36.52%), Postives = 460/827 (55.62%), Query Frame = 0
Query: 138 SLLRQC---RTLINAKLAHQQIFVNGF---TEMATYAVGAYIECGAFAEAVSLLQRLIPS 197
S+L+ C ++L + K I NGF + + + Y CG EA + +
Sbjct: 99 SVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV--K 158
Query: 198 HSTVFWWNALIRRSVRLGFLDDALGFYCQMQRLGWLPDHYTFPFVLKACGEIPSFRRGAS 257
+WN L+ + G ++G + +M G D YTF V K+ + S G
Sbjct: 159 IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQ 218
Query: 258 VHAIVCANGFESNVFICNSIVAMYGRCGALDDARQVFNEVLERKIEDIVSWNSILAAYVQ 317
+H + +GF + NS+VA Y + +D AR+VF+E+ ER D++SWNSI+ YV
Sbjct: 219 LHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER---DVISWNSIINGYVS 278
Query: 318 GGESRTALRVALRMANHYSSKLRPDAITLVNILPACASAFAPQHGKQVHGFSVRSGLVDD 377
G + L V ++M S + D T+V++ CA + G+ VH V++ +
Sbjct: 279 NGLAEKGLSVFVQM---LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 338
Query: 378 VFVGNALVDMYAKCSKMNEANKVFERMKEKDVVSWNAMVTGYSQIGSFDSALSLFKRMQE 437
N L+DMY+KC ++ A VF M ++ VVS+ +M+ GY++ G A+ LF+ M+E
Sbjct: 339 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 398
Query: 438 EDIELNVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGWEPNVVTLVSLLSGCASVGALLH 497
E G P+V T+ ++L+ CA L
Sbjct: 399 E-----------------------------------GISPDVYTVTAVLNCCARYRLLDE 458
Query: 498 GKQTHAYAIKNILNLDWSDPGGDLMVLNGLIDMYAKCKSYKVARNIFDLIAGKDKNVVTW 557
GK+ H + +N D G D+ V N L+DMYAKC S + A +F + KD +++W
Sbjct: 459 GKRVHEWIKEN-------DLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKD--IISW 518
Query: 558 TVLIGGYAQHGEANDALELFAQIFKQETSLKPNAFTLSCALMACARLGALRLGRQLHAYA 617
+IGGY+++ AN+AL LF + +E P+ T++C L ACA L A GR++H Y
Sbjct: 519 NTIIGGYSKNCYANEALSLF-NLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYI 578
Query: 618 LRHENGSEVLFVANCLIDMYSKSGDIDAAQAVFDNMKVRNAVSWTSLMTGYGMHGRGEEA 677
+R+ S+ VAN L+DMY+K G + A +FD++ ++ VSWT ++ GYGMHG G+EA
Sbjct: 579 MRNGYFSD-RHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEA 638
Query: 678 LHVFHQMRQAGFVIDGVTFLVVLYACSHSGMVDQGMDYFHGMIKCFGVTPGAEHYACMVD 737
+ +F+QMRQAG D ++F+ +LYACSHSG+VD+G +F+ M + P EHYAC+VD
Sbjct: 639 IALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVD 698
Query: 738 LLGRAGRFNEAMELIKSMPMEPTAVVWVALLSASRIHANIELGEYAASRLLESGAENDGS 797
+L R G +A I++MP+ P A +W ALL RIH +++L E A ++ E EN G
Sbjct: 699 MLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGY 758
Query: 798 YTLLSNLYANARRWKDVARIRSLMKNTGIKKRPGCSWIQGKKTTTTFFVGDRSHPESDQI 857
Y L++N+YA A +W+ V R+R + G++K PGCSWI+ K F GD S+PE++ I
Sbjct: 759 YVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENI 818
Query: 858 YNLLSELIKQIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRI 917
L ++ ++ + GY P T +AL D ++ EK + L HSEKLA+A GI++S G+ IR+
Sbjct: 819 EAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRV 871
Query: 918 NKNLRICGDCHSALTYISMIIDHEIILRDSSRFHHFKKGSCSCRSYW 959
KNLR+CGDCH ++S + EI+LRDS+RFH FK G CSCR +W
Sbjct: 879 TKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
BLAST of HG10006016 vs. TAIR 10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 541.6 bits (1394), Expect = 1.3e-153
Identity = 293/827 (35.43%), Postives = 461/827 (55.74%), Query Frame = 0
Query: 135 PFTSLLRQCRTLINAKLAHQQIFVNGFTE---MATYAVGAYIECGAFAEAVSLLQRLIPS 194
P LL +C +L + +F NG + T V + G+ EA + + +
Sbjct: 39 PAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSK 98
Query: 195 HSTVFWWNALIRRSVRLGFLDDALGFYCQMQRLGWLPDHYTFPFVLKACGEIPSFRRGAS 254
+ ++ + +++ ++ LD AL F+ +M+ P Y F ++LK CG+ R G
Sbjct: 99 LNVLY--HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKE 158
Query: 255 VHAIVCANGFESNVFICNSIVAMYGRCGALDDARQVFNEVLERKIEDIVSWNSILAAYVQ 314
+H ++ +GF ++F + MY +C +++AR+VF+ + ER D+VSWN+I+A Y Q
Sbjct: 159 IHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER---DLVSWNTIVAGYSQ 218
Query: 315 GGESRTALRVALRMANHYSSKLRPDAITLVNILPACASAFAPQHGKQVHGFSVRSGLVDD 374
G +R AL + M L+P IT+V++LPA ++ GK++HG+++RSG
Sbjct: 219 NGMARMALEMVKSMC---EENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSL 278
Query: 375 VFVGNALVDMYAKCSKMNEANKVFERMKEKDVVSWNAMVTGYSQIGSFDSALSLFKRMQE 434
V + ALVDMYAKC + A ++F+ M E++VVSWN+M+ Y Q + A+ +F++M +
Sbjct: 279 VNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD 338
Query: 435 EDIELNVVTWSAVIAGYAQRGHGFEALDVFRQMQLCGWEPNVVTLVSLLSGCASVGALLH 494
E G +P V+++ L CA +G L
Sbjct: 339 E-----------------------------------GVKPTDVSVMGALHACADLGDLER 398
Query: 495 GKQTHAYAIKNILNLDWSDPGGDLMVLNGLIDMYAKCKSYKVARNIFDLIAGKDKNVVTW 554
G+ H +++ L LD ++ V+N LI MY KCK A ++F + + + +V+W
Sbjct: 399 GRFIHKLSVE--LGLD-----RNVSVVNSLISMYCKCKEVDTAASMFGKL--QSRTLVSW 458
Query: 555 TVLIGGYAQHGEANDALELFAQIFKQETSLKPNAFTLSCALMACARLGALRLGRQLHAYA 614
+I G+AQ+G DAL F+Q+ + ++KP+ FT + A A L + +H
Sbjct: 459 NAMILGFAQNGRPIDALNYFSQM--RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVV 518
Query: 615 LRHENGSEVLFVANCLIDMYSKSGDIDAAQAVFDNMKVRNAVSWTSLMTGYGMHGRGEEA 674
+R V FV L+DMY+K G I A+ +FD M R+ +W +++ GYG HG G+ A
Sbjct: 519 MRSCLDKNV-FVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAA 578
Query: 675 LHVFHQMRQAGFVIDGVTFLVVLYACSHSGMVDQGMDYFHGMIKCFGVTPGAEHYACMVD 734
L +F +M++ +GVTFL V+ ACSHSG+V+ G+ F+ M + + + +HY MVD
Sbjct: 579 LELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVD 638
Query: 735 LLGRAGRFNEAMELIKSMPMEPTAVVWVALLSASRIHANIELGEYAASRLLESGAENDGS 794
LLGRAGR NEA + I MP++P V+ A+L A +IH N+ E AA RL E ++ G
Sbjct: 639 LLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGY 698
Query: 795 YTLLSNLYANARRWKDVARIRSLMKNTGIKKRPGCSWIQGKKTTTTFFVGDRSHPESDQI 854
+ LL+N+Y A W+ V ++R M G++K PGCS ++ K +FF G +HP+S +I
Sbjct: 699 HVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKI 758
Query: 855 YNLLSELIKQIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRI 914
Y L +LI IK+ GYVP T+ L V+++ K LL HSEKLA+++G+L + G I +
Sbjct: 759 YAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHV 809
Query: 915 NKNLRICGDCHSALTYISMIIDHEIILRDSSRFHHFKKGSCSCRSYW 959
KNLR+C DCH+A YIS++ EI++RD RFHHFK G+CSC YW
Sbjct: 819 RKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
BLAST of HG10006016 vs. TAIR 10
Match:
AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 536.2 bits (1380), Expect = 5.4e-152
Identity = 283/726 (38.98%), Postives = 426/726 (58.68%), Query Frame = 0
Query: 266 FICNSIVAMYGRCGALDDARQVFNEVLERKIEDIVSWNSILAAYVQGGESRTALRVALRM 325
F N++++ Y + G +D + F+++ +R D VSW +++ Y G+ A+RV M
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQR---DSVSWTTMIVGYKNIGQYHKAIRV---M 140
Query: 326 ANHYSSKLRPDAITLVNILPACASAFAPQHGKQVHGFSVRSGLVDDVFVGNALVDMYAKC 385
+ + P TL N+L + A+ + GK+VH F V+ GL +V V N+L++MYAKC
Sbjct: 141 GDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKC 200
Query: 386 SKMNEANKVFERMKEKDVVSWNAMVTGYSQIGSFDSALSLFKRMQEEDIELNVVTWSAVI 445
A VF+RM +D+ SWNAM+ + Q+G D A++ F++M E DI VTW+++I
Sbjct: 201 GDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI----VTWNSMI 260
Query: 446 AGYAQRGHGFEALDVFRQMQLCG-WEPNVVTLVSLLSGCASVGALLHGKQTHAYAIKNIL 505
+G+ QRG+ ALD+F +M P+ TL S+LS CA++ L GKQ H++ +
Sbjct: 261 SGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGF 320
Query: 506 NLDWSDPGGDLMVLNGLIDMYAKCKSYKVARNIFD------------------------- 565
++ +VLN LI MY++C + AR + +
Sbjct: 321 DISG-------IVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDM 380
Query: 566 ------LIAGKDKNVVTWTVLIGGYAQHGEANDALELFAQIFKQETSLKPNAFTLSCALM 625
++ KD++VV WT +I GY QHG +A+ LF + +PN++TL+ L
Sbjct: 381 NQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV--GGGQRPNSYTLAAMLS 440
Query: 626 ACARLGALRLGRQLHAYALRHENGSEVLFVANCLIDMYSKSGDIDAAQAVFDNMKV-RNA 685
+ L +L G+Q+H A++ V V+N LI MY+K+G+I +A FD ++ R+
Sbjct: 441 VASSLASLSHGKQIHGSAVKSGEIYSV-SVSNALITMYAKAGNITSASRAFDLIRCERDT 500
Query: 686 VSWTSLMTGYGMHGRGEEALHVFHQMRQAGFVIDGVTFLVVLYACSHSGMVDQGMDYFHG 745
VSWTS++ HG EEAL +F M G D +T++ V AC+H+G+V+QG YF
Sbjct: 501 VSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDM 560
Query: 746 MIKCFGVTPGAEHYACMVDLLGRAGRFNEAMELIKSMPMEPTAVVWVALLSASRIHANIE 805
M + P HYACMVDL GRAG EA E I+ MP+EP V W +LLSA R+H NI+
Sbjct: 561 MKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNID 620
Query: 806 LGEYAASRLLESGAENDGSYTLLSNLYANARRWKDVARIRSLMKNTGIKKRPGCSWIQGK 865
LG+ AA RLL EN G+Y+ L+NLY+ +W++ A+IR MK+ +KK G SWI+ K
Sbjct: 621 LGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVK 680
Query: 866 KTTTTFFVGDRSHPESDQIYNLLSELIKQIKDMGYVPQTSFALHDVDDEEKGDLLFEHSE 925
F V D +HPE ++IY + ++ +IK MGYVP T+ LHD+++E K +L HSE
Sbjct: 681 HKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSE 740
Query: 926 KLAVAYGILTSAPGQPIRINKNLRICGDCHSALTYISMIIDHEIILRDSSRFHHFKKGSC 959
KLA+A+G++++ +RI KNLR+C DCH+A+ +IS ++ EII+RD++RFHHFK G C
Sbjct: 741 KLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFC 786
BLAST of HG10006016 vs. TAIR 10
Match:
AT1G18485.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 534.3 bits (1375), Expect = 2.1e-151
Identity = 302/866 (34.87%), Postives = 465/866 (53.70%), Query Frame = 0
Query: 164 MATYAVGAYIECGAFAEAVSLLQRLIPSHSTVFWWNALIRRSVRLGFLDDALGFYCQM-Q 223
+ T + Y CG+ ++ + L +F WNA+I R D+ L + +M
Sbjct: 122 LCTRIITMYAMCGSPDDSRFVFDAL--RSKNLFQWNAVISSYSRNELYDEVLETFIEMIS 181
Query: 224 RLGWLPDHYTFPFVLKACGEIPSFRRGASVHAIVCANGFESNVFICNSIVAMYGRCGALD 283
LPDH+T+P V+KAC + G +VH +V G +VF+ N++V+ YG G +
Sbjct: 182 TTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVT 241
Query: 284 DARQVFNEVLERKIEDIVSWNSILAAYVQGGESRTA-LRVALRMANHYSSKLRPDAITLV 343
DA Q+F+ + ER ++VSWNS++ + G S + L + M + PD TLV
Sbjct: 242 DALQLFDIMPER---NLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLV 301
Query: 344 NILPACASAFAPQHGKQVHGFSVRSGLVDDVFVGNALVDMYAKCSKMNEANKVFERMKEK 403
+LP CA GK VHG++V+ L ++ + NAL+DMY+KC + A +F+ K
Sbjct: 302 TVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 361
Query: 404 DVVSWNAMVTGYSQIGSFDSALSLFKRMQE--EDIELNVVT------------------- 463
+VVSWN MV G+S G + ++M ED++ + VT
Sbjct: 362 NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKE 421
Query: 464 -----------------------------------------------WSAVIAGYAQRGH 523
W+A+I G+AQ
Sbjct: 422 LHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND 481
Query: 524 GFEALDVFRQMQLCGWEPNVVTLVSLLSGCASVGALLHGKQTHAYAIKNILNLDWSDPGG 583
+LD QM++ G P+ T+ SLLS C+ + +L GK+ H + I+N L
Sbjct: 482 PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLE-------R 541
Query: 584 DLMVLNGLIDMYAKCKSYKVARNIFDLIAGKDKNVVTWTVLIGGYAQHGEANDALELFAQ 643
DL V ++ +Y C + +FD A +DK++V+W +I GY Q+G + AL +F Q
Sbjct: 542 DLFVYLSVLSLYIHCGELCTVQALFD--AMEDKSLVSWNTVITGYLQNGFPDRALGVFRQ 601
Query: 644 IFKQETSLKPNAFTLSCALMACARLGALRLGRQLHAYALRHENGSEVLFVANCLIDMYSK 703
+ L ++ AC+ L +LRLGR+ HAYAL+H + F+A LIDMY+K
Sbjct: 602 MVLYGIQL--CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDA-FIACSLIDMYAK 661
Query: 704 SGDIDAAQAVFDNMKVRNAVSWTSLMTGYGMHGRGEEALHVFHQMRQAGFVIDGVTFLVV 763
+G I + VF+ +K ++ SW +++ GYG+HG +EA+ +F +M++ G D +TFL V
Sbjct: 662 NGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGV 721
Query: 764 LYACSHSGMVDQGMDYFHGMIKCFGVTPGAEHYACMVDLLGRAGRFNEAMELI-KSMPME 823
L AC+HSG++ +G+ Y M FG+ P +HYAC++D+LGRAG+ ++A+ ++ + M E
Sbjct: 722 LTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEE 781
Query: 824 PTAVVWVALLSASRIHANIELGEYAASRLLESGAENDGSYTLLSNLYANARRWKDVARIR 883
+W +LLS+ RIH N+E+GE A++L E E +Y LLSNLYA +W+DV ++R
Sbjct: 782 ADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVR 841
Query: 884 SLMKNTGIKKRPGCSWIQGKKTTTTFFVGDRSHPESDQIYNLLSELIKQIKDMGYVPQTS 943
M ++K GCSWI+ + +F VG+R ++I +L S L +I MGY P T
Sbjct: 842 QRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTM 901
Query: 944 FALHDVDDEEKGDLLFEHSEKLAVAYGILTSAPGQPIRINKNLRICGDCHSALTYISMII 959
HD+ +EEK + L HSEKLA+ YG++ ++ G IR+ KNLRIC DCH+A IS ++
Sbjct: 902 SVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVM 961
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038889862.1 | 0.0e+00 | 92.63 | pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_03... | [more] |
XP_008455181.1 | 0.0e+00 | 89.85 | PREDICTED: pentatricopeptide repeat-containing protein At5g16860 [Cucumis melo] ... | [more] |
XP_004137054.2 | 0.0e+00 | 89.03 | pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_0116... | [more] |
XP_022143067.1 | 0.0e+00 | 88.77 | pentatricopeptide repeat-containing protein At5g16860 isoform X1 [Momordica char... | [more] |
KAA0031472.1 | 0.0e+00 | 89.75 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK06925... | [more] |
Match Name | E-value | Identity | Description | |
Q9LFL5 | 8.9e-301 | 59.71 | Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX... | [more] |
Q9SN39 | 3.9e-155 | 36.52 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
Q3E6Q1 | 1.8e-152 | 35.43 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
Q9SHZ8 | 7.6e-151 | 38.98 | Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... | [more] |
Q0WN60 | 2.9e-150 | 34.87 | Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3C0G3 | 0.0e+00 | 89.85 | pentatricopeptide repeat-containing protein At5g16860 OS=Cucumis melo OX=3656 GN... | [more] |
A0A6J1CPQ5 | 0.0e+00 | 88.77 | pentatricopeptide repeat-containing protein At5g16860 isoform X1 OS=Momordica ch... | [more] |
A0A5A7SK77 | 0.0e+00 | 89.75 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A6J1H912 | 0.0e+00 | 88.67 | pentatricopeptide repeat-containing protein At5g16860 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1KUL7 | 0.0e+00 | 87.70 | pentatricopeptide repeat-containing protein At5g16860 OS=Cucurbita maxima OX=366... | [more] |
Match Name | E-value | Identity | Description | |
AT5G16860.1 | 6.4e-302 | 59.71 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G18750.1 | 2.8e-156 | 36.52 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G11290.1 | 1.3e-153 | 35.43 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G22070.1 | 5.4e-152 | 38.98 | pentatricopeptide (PPR) repeat-containing protein | [more] |
AT1G18485.1 | 2.1e-151 | 34.87 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |