HG10006003 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006003
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RBR-type E3 ubiquitin transferase
Location	Chr07: 11254503 .. 11270933 (+)
RNA-Seq Expression	HG10006003
Synteny	HG10006003

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCGGAGGACGAGCTCGACATGCACGATGCCCATGACGACGACGACTCTGTTGACAATGAGGAGGACTTCTACAGTGGCGGCGACGACGATGCTGCCGCCATCGACAGCGACGATGCTGATGTCGGTGATTACGAGTTTGTTGATAATGATTCCGACGATTCCGACGACATGGTCTCCTATCGCCACCAGGTTCATATTGTTCCACTTTCCAACTTTTTGTGTTTCTCCATGGGCATTCATAATTTGTAGTTTTGCGAATGCTGCTGTTTCTCGATTGCTCTATTCTACTCTTTACCAATCTGAATTTCCAGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAATTTCTTTGTTTTTCTTCCCCTATTTGAGTATGAGATTGGGATTATTTTTTTGCCTCTTTCTAGAAATGCATAGCTAGGGAATTTTGATCATTCTCTTCATGCGAGTTTGTTTCGTTTTGATGGTTTAATTGGGTACTCAAGTGCAATTAAACTCTTGAAGTTTGTTAATTTTAGTTATATATATCTTGAAATGTGATATTTTCGGGAAGAACTAGACTGTTCCACGACTCCTCGAGGTTGAGTTAGAAGCATAATCGCTGGTTCGTTGTAGAGCCAGCAGTGGCTTATCTAACTTTTAAAAAATTGTATTAATAACAAGAGAGAACCAAGAGCATATTTGTTTTCTGCCAAGCAATGCTTCCTTTGTGGTTTAAGCTTTTGGAAGCTTTCCTTCTGTCCAGGACTTGTTCTGGATTAGTTTTGCTGGTAATCTGGTGGTTTAGGCGATTGTAGGGCCAAGGTTCAGGAACTGTTGGAGGGTTTTGTGGACTAATGCTTGTGGTGCTCTCCTCTAGAACATTTGCTAGTAGGAACGAGAGAGAAAAGAAAAAGAAATGAGGGTGGGTGGTTAGACAGGAGAGAGTGACTTTGGGTAGTTATTATTGCCTTATTTCTTCAAATAGATAGAGGGATTCCTTGATCTCATTCTTTGAATCAAAGGCTTCGGCACCAAGTGGAGAAGATGACTCCATGGCTACATTTCCTCATCCAATTCCTCCAATATTATAACTGGCAATTCTCGTGGGAAGATTATAGCCTCAAGGGGTCTTTTGAAAAGGGATCCTGATTATAGCCTCAAGGGGTCTTTCGAAGGATGATCCTTACTTTTTTCATTCTTATCATGGATTGTCTTAGTAGGGTTTTAAATAAAGCGGAAAGTGATGGATTGATTAAAGGTTTTGTTGTGTGCTCCTTAACTATTATGCATCTTCAATTTGCAGATGATACCATGTTATTCTCATCCCCCAAAGTCACACACCTTGACAATCTATTACATCCATTAATGATGTAGTAGGATTAGGGTATTATAGGCAAAACTTTAATTTATTAGGATTAGGATTAGTTTCTTTAATTTATTAGGATTAGTTTCTTTAATTTATTAGGATTAGGTTAGTTTCTTTAATTAATTAGTATTAGGATTAGTTTCTTTGATTTATTAGGATTAGGATTAGGATTAGGATTAGTTTCTTTAATTAATTAGGATTAGGATTAGTTTGCTTTCCAGTTCTCTATAAATAGATTGAATGCCTTCTTGTTTTGGCAAGTTTTAATTGATTTGAATAAAATTCTCTCTTGTCTTGTGTCTTCGAATTATTAATAAGAGAGAATTTTATTCAAATCAATTTAAATTTTATTCAATCCTAATTAGTTAAATCCTGAAGATAGTAGAGAGGGAAGGCGAATCCGATGAAACCCGTGAGAACGGCAAAGAGATAAAATTGATGGAAACAAAAGAAAAGAAGGGAGGTGATGATGGGTTCCAAGGCAGAGGAGAAAAAGAAAAAAAGGATGGTGACTCGAAGATGGAGGAATCAGAGGAAAATGGTCAGGAAGAAGATGGAAGGAAGAAGCATCACCTTCTTCTTTTGTTCAATGTTGTAGCTTTGGTATCTATTGTTCACTGGGCTAAGTTTTGGCCTCAGTTTGTAGTGGAGTTAGTTTTTGCTCTGTTTGGATATGATGAGGGTGCTAAGGGGGTGTGCGAGGTATGTTGAGCCCGACGCCATCCAATTCAAGCCCTGTTCAGCAAGATTTTGATATTGAATCAATTGTTAGTGCAAGCAGTGAAGAAGTGGATAGAATTGATGTAGATGATGACCAGGATAAGACAAAATTTGAAGATTCATTTGGCAAAGATATTGGTAAATTGTTCCAGACGGAAGAAGTCATCGAAAAGCTTCATGAAATTTCCTTTAAAACTCTCCCAAAATTTAATGAAAAATTCTGCCGTAAACCCATTTGGTCTAGGTGCTTTATTTTTCCCCAAGGCCTTCCATGCTTTTCAGATTTCATCTAAGGTAAACCGTGATATCAGCCAGCTGTTTTGAGCCTCAAATACAATGTTCCATTCCAAAAGAATGGGTATAGACCCTGCACTAGGAAACTTTAAGTAGAGAGAATTATAGAAGCTCAAAATAAAGTCTTCAATTTCATGAAAGGATCTAGTCGGGGAGTCTTGGTCATTTAATAATTCTGCTATCAAGTTCTTCCTTTTCTTTGCTGCTAGAAATTTGTGGAAAAAACTCGAATTCTCATCCCCCAATCTAGGCCAATTAAGCTTACTTTTTTGAATCAAATTTCTTTCCCCCACTCTATAAATTGCCATCAAATTTGCCTTTAGTGACAGTCTCATGTCCAATTCTAACACGGAGTCTGAATTTTCTGCAAGGATTTCACTTCTACCAATTTCATCAATCAAACTCTCTTCCAGACTTCTTTGTTTTCCTTTGAAATCTTTATGCCATTCTTTTAAAACCACCTTTAAGCTTCTCAATTTTGATGAAATCACATAACCTGCCCATCCTTGATGTCTGCAGCTGTTCAAAGTTCTTTCAATGAGTCGGCAACAATTCTTATTTAGCAACCAGCTGTTACAAAATCTGAAAGGTGAAGGACCCCACTCAAAGGATCCAGCTTCTAACAAAAGGGGAAAGCGATCTGATGCTACCCGAACTTGTCTCATCACTCTAGTGTCCTCAAATGCCTCATCCCAATCATTTGTAACCAAAAATCTGTCCAGGAGTGATCTAGAAATAACTCTTCCTTCTCTAGACCAAGAATATCTTCCATTGAAAAGAGGAATTTCTAACAAATTTGCTTCAGCAATGAATTTATTGAATTTCCTCATTCCTTTAGTTACTCTTCCCATTGGAAAACGCTCCTTTGCTCTTTGAGTTATATTAAAGTCTCCACCTATACACCAAGATCCAATACAATATACCGAAAGGGAAAAGAGTTCAGGCCAGATGTACCTTCTTTCTTTGTAATCCGTAGTACCATAAACATTCGTCACCCAACAAACCTTTTTATAAAGAGTTATACATTTAACTGATAACGAGTATCCTCCTTTAAGCACTTATGATATCGAGACTTTGGTTTCATCCCACATTGTTAACATGCCTCCTGATTTGCCATAAGCTTCCACAAAGACCCAATCCACTTCTTTTGAACTCCACAAAGCTTTGATAAATTTAATATCAAAAGTATCCCTTTTTGTTTCTTGAATAAAAACAATATCTGGGTTTACTTTCTTGAGAAGACGCTTAAGTGCCAATTGTTTAGATGGATCACTTAATCCCCTTGTATTCCACGTAATTATCTTCATAGTACAAAACACGAACTAACCTTCCTTTGCCTTTTAACCCTGATCATTAACCAAAAGTGATGTCACAATCATCAATTAAGGAAATCAAATGCTGAGGAATTTCCTTCTTATTCTTTGGAGAGAAATTGGAAACTTCAATCTTACCTGTTGGCTGGTTGATATCTGAGTGAAATAATTTGAGAAGATCATTATTGACCGCTTCATCATCTACTGCCTCATCTAGTACTTCTTCTGTTTCAAAACAATCAAGCTCTTCACTGCTGGCACTTACAATTGATTCACCATCTGAGACTTGCAACTTTGAACTTGATTTTGATGAAGATGAACTCAAAATCCCTCGAACAAATTATACATTAGAACCTGGGATTATGAAAGTTGATTGTTGAAAATTGAAAGCGGAAGATGAAGACTGAGCTAACCTATTGGAAAATACACCAGGCACTTGACTTCTAACACAACATTCTTCAAGCAAATCTGAATTTACCAGTGCAGACCAAGAGTTAAGAAAGGAGGTTCTTTTTCTTGCAAAGTGTCTTGGGAATGGCTTAAACAAATGTGGGCGCTTCTTTGTAACAACCGAAGGGGACTGTTTGGTTGAATCTATCTTCTCATTATTACTTTGCAAACGAACATTACAACTCTTTGAAGAGTTTTCAGAATTTAATGAGGCTGTTTGCAAGACTAAAATATTTTCTGACTTAGCATCTAAGTTAGAATGTGGAGAGAATGTAAACTCTTGAATGACGGGGCAAACTGACCTTTGATTTTCCATCAGAACAACATTAATAGACTTGGCCGTTTTAGCAATCAAAGCTTCGTTGGAAGGGGAACCGATTCTGGAGATTTCATTGTTCCCACTTAAAGAGCTGACAACGTCTTTCTCTTTCCTCATTAAACTCACCCCTTCGACTCCTTCTAACTGGTTTAAATTTTTTGCGTTCACATCTGAATTGCTAACCTTCAACTTGGGGCTGGAAACGAAGGCCTGAAACTCCATTTTTTCCAGTGAAGGACTCTTACTTTCTGACGAAGACTTAAAAGCTTGGGAATTTCCTTTTTCTAATGTCTGCGAATGGATCTCTGATATAGCTCGGCTTGTTCTGATTGAGAAAGTTCCACTCTTGAACAGAAAGATTGAAATTCAGACCTTCATCCTGTGCTACCTGATTCAAACGTACTAAATCGAGTGGATTAGTAAATTTTTTTAAGAATAAGGCTCCTTCAATTAATCTTTGTTCTTCAATAACTTCAATGTCACCGAAGTTCAAGAAAATATTGCCTCTTTTTTCATCCTTAATCTCTATAGTTGCAGGCATATCCACATAATTTTTTCTTAACTTGTATCTTGGCTTCTGAGCAGTTCAAAAGGTTGAGAGTTTGATAAGCAATATTCTCCAATCCTCTAAAATGAGCTCCAATGGCTTCGAAAGTGCTCCTGCTCCAATATTCCAATGGTAGATTTTTTATAGATAACTGTCCTCTGTAACCTTTTATAAACAAAGGTCTGCTATGTTTCAATGTGTTCCATTTCTCAAATAGCAGATGTCACTGGCCATAATCCTGCCATTTCCCCAGAGCTTCTATCAAATCTTCTAATTGATCATGATCAAATTTAATCAAAGCTTTATCTGCAAACAGGGGATTAACTATGGCTTTAACATTGAAGAGTTCTTCCAGGAATTTTGCAATATCTTTCCAATCATTAAACACAAACAGTTTTGAAATAACCCAAAGGTTATTAAAATCTTCCTTGAATACTTCATTGTTCTTTTGAATCCAATCATTACTCTGATTTTCTACACTCTAATAGACGATTTTGACTGATTGAGATTCAATGAGTTGTCCATGCTCTGTTTTGATGGGTTAAAAACAGGGGCCGAAGAGCTTCTTGAAATCTTCACAATGTCCGCATAACTCGATTTGTTATTCTTTGGGGGAGAATACTCTGTAGAATAAAATTCTACTGAAGAATTCTCTGCCTTCTCTTTTCTTTCGAGCTGCCTTGTTTTAATCTCGCTTTTCTTGAAGAAATCCTTCAACATTCTCCAAACGGACTTCCATCCTTCCCGGGCTAGCCCCATTGCTACATGAAGAAAGTAACGACCTTGGCCAAACAACACATCTCAGAACCCATTCGGAATGTGCTCTGAATTTCAACAATCTTGTCACCCCAGATGAATCTCGTCCGTTTCTTAAGAAAAAATGGTTACTTGGGCCTTAAAGTAATTTTGATATTTGATCGATGAACCAATGGAGTTGGGACTTGGATAAAGGAATGAATTTACCAGCTTCCATGTCTTCAACATGAAACCTTCCCAAGTTGAGCCAAATACAGTAATAATCACCATTTATCTTGCAGCTTGACACTTCCATACTGACTTCTTAAGGACCTTCATCCTTCGGGGAGAATCGAACACAAGGTGATCGAAGCCTCGTCGGGCGAGAAAGAGAAGGAGAAGGTTGACGATCCAAAGAGACTTATGAAGACGTTAGGTGAAGATGGAATCTTCAGCGGCGACGTTAGGTGAAGATGGAATCTTCAGCGGCGACGTGAGATGTAGACTGAATCTTCGATGGCAACGTGAGATGTAGACGGAGTCTTCGCCGGCGATGAGAATTTCGGCAAGAAAGGGAGGAGCATCAAAAGAGAGGGAGGAGAGAGGAGAGAGGAGAGAGAAGAGAGAATACTCATTTGGTAGTGAATATCCTGCTGTGTTGTGCAAACTGATTGTGAAGACTCTAGATATGGAACCTCGATAAAGATGGTATCTTCACCTCTAAATCTTTGTCTATGTCATTGGCTTCCCGTGGCATCCAATGAAAAGATCTTTAAAGTGCCATTTGGGGTGGGAGATTCTCTAAAAAAAGATAGGCTTTTTATTTGGACTCTAAAAAAAGAAGTTGCCATCTCTAAATTGTGGAATAGTGAAACATCAACATGGAAGGTTTGGCCAAGGAGAAGTGTTAATGAAGTCAAAATTGGTGAATGGGCTATGCTTTCGGATGCCCTTTCCCCAGTTGTATCGTGAAAACTCATTGTATGGAACCTCAACATAGATAGTATCTTCACCTCTAAATCATCGTCTAGGTCTTTGGCTTCAAGTGGCATCCAAGAAAATGTTCATCTTTACCGAGCCATTTGGGGTGGCAGATTCCCTAAAAATGTTTTTTATTTTTTTATTTTTTTTATTTGGACAGGACTCTAAAAAAAGAAGCTGCCATCTCTGAATTGTGGAATAGTGAAGTAGCAACCTGGAATATTTGGTCAAGGAGAAATCTTAGTGAAGTAAAAATTGGCGATGGGCTATGCTTTTCAATGCCCTTTCCCAGTTGTGCTATCAGCTCTTGAAGACTCAAGGCTGAGATGGTATCTTCACTTAGGTCTTTGGCTTCCATACATCCAATGAAAATAACATCTTTGCTGAGCCATTCGGGGTGGAAGATTCCCTAAAAGCGTTAAGTTTTTTATTTGGGAATTTAGCAAACACCCAAGTCAAGCTTCAACAAAGGCTCATAACCATCTCTTTAGCTTTTGTGCTTTTGCCAGATCGTTTTGGGATTTCATCTATGGCTTTTGGTTGGTTGTTGGCTCTTCTGTTAGAGGTTTAGTCTCCCCTCTCTTTCTCTCTCATTGGGCTCGCTTTAATGAGAAGAAAACACCGTGAATGAATTTCATTAGGGTATTTTATTGGTCTACTTGGTTGGAAAGGAATTCACTTACTTTCTTCGACAAGGAACGTGATTTTAATTCGTTCATATCTTGTCTTACTTAGCTCTCATTTGGCATCGTTTTAATGAGAAGAAAACATCTTGACTGAATTTCATTAGGGCGTTCTATTTGTCTACTTGGTTGGAAAGGAATTCTCTTACTTTCTTCGACAATGAACGTGATTTTGATTTGTTCATATCTTGTCTTACTTAGCTCTCGCTTGGTGTAAATTGACTCCCTTGTAATTATGGTCTAACTTCATTTATTATCCATTTGAAATGTTTTTGTAATCCTTTGGATAGGAGCCTCCATTTGTAATTTCGTTTGTTTCCTATAAAAAGTGTCTCACAATTATTTATCTTTATAAATTTTCAGCAAAACTATATAATCTTGGCCGAGGCAGATATACAACAGCGACAGGAGGAAGACATCATGAGAGTATCCACTGTTCTTTCTATTTCAAAAGTAGCCGCTAGCATCTTGCTCCGATATTACAACTGGTATAAATTTATGACCTGTATGTCAAGTACTTGAACACAGATGATTGAGATGATGAACCCTATTAATGCGAAGCATGTGTCTTGACGTTTCTTATTACATAGCATTGTAGATTTAGTTATTACACCACAATATTAATGCATTCACTTCATGTTTTCTCCACTTTATAAATATCGTAGGCCCAGTTTCATGTTCTAAATTTTGGGGATTCTACAACGATCTTGCTTTGCAGGAGTGTTAGTAAAGTGCATGATGAATGGTTTGCAGATGAAGAAAAGGTCCGTAGATCTGTTGGCTTACTAGAAAAACCAGTTTTGCGACATTCAAATGAACTAGAAGTAAGCAATCTCATTTATTCTTAGTTTTATTAAGCTTCTGTTAATTATTTTTGCATTAACAATTGCTTGGTCAAATTGAGCATGTAAACAGTATTATGATATACCTTATTTTTATGCAGCTACCTTGTGGTATATGTTTTGAAATCTATTCACGTGATAAGATCCAGTCTGCTTCTTGTGGCCATCCATTCTGCAATGCATGTTGGACAGGTTTGCCAACTCATAGCAAGCCATTTTTGTTAACTGTTCTGTTATATTTGCTTGGTTCTAGCCTTTTTTTTTTTTCTTTTCATAAGAAACATTAACGGAGGATATATTCTAAAAGATGAAGCAGAACAGCCTAATGCCCCCCCCCCCCAAAAAAAAAAAAAAAAACACACACGCACACAACAAGAAGAAGCAGCTACACAAAAAGAATTTCCTTTGTAAAACTTCCCACCAAGGGATGATTTGTACAAAATTGCAAAAAGAATCGAAGTGTAATGACTTGGGAGCTTGTTCTCCTCCTTGATTAAAAAGAATAAGTTGAAAGAAGGCCATAGAATAAGATATTTGTCTGAACTATGATATTTTGCCATATAAATGATCGTACAAGGTGAAAGAAGTGCAAAATAGTGCTTCACCTTTCATGGGAATTAGGAAGGAATACCTCCATCGTTTATAGAAGCAAAAGAACAAGATAAAAGATGTGATTGATCATTACTCAGGGAAGCGAAGTTAGTTGGAGGAGGATGGGAAGATTGTGTCATGAAAAGTGATGAATGCAAGAAAAATGTGTAACAAAAGTTTGAATGAATTTTTGGAGATATCAAAATCAAGAGACGTGAGCTTTTGGCTAAGATTTTGAGATTGATGAGTTGGAAGCTGAGGGCAAGCTCGATGTTACAATGAAAGAGGTTTGAGACTCTCTTAAGTTAGATGTGATTAGGAAGGAATCTAGTAGTAGTTGGAGGTGAAAAGCCAACGTCAAATGGGCTAAGGAAGGAGATTGCAACACTTTCTTTTTTCATTGAGTGGCAAGTGGTCGAAAAGGTAGGAACACTATGGGCCTTTTGATCAAAGTTTCTTATATATATATATACATATATATATATTTTGGAAAGAGAAACAACTTCATTGATAAATGAAATAAGGAGAAAGCTTGGAACACCAATAGGTGAATTACAAAAATAGCCTCCAATTGGAGATTAAGTAAGAAGAACTATAAAGAGTAAATGGGTGTGTATTTATACACACAAACTCACACAAAAAAAGCATTAGAGATTACAAGTTCCAAAATAATGATCAAAATTAAAGGAAACTTCCCCAAAAAAACAACCATTCCTAGCACCCAAAGAGTTAAAAAAAAAAGCGCGACTGAAAGCAAGCCAAAGGGCCTCTTTTAATACCATGAAAAAAGGGTGGAACTGCATCCTAATTCTCGTATTTGGAGCTTAGATTCTTCTGGAAGATTTTCGGTCAAATCCTTATCTAAACACTTGGCCGCTTTTGAAGAAATTGATAAATTTGTTTATAAGAGCTTGTGGAAAACAATCTTTGAGCATTAGTCTCTTTTCATTTTATCAATGGAAAACAAATAGTCCTAAGAGAGTTAGTATTCTCTCTTGGACTATGATTTTTGGGACTTTAAACTACTCCGCTGTTCTTCAAAGAAAACTTCCAGCTCACTGCCTCAGTCCCACCATGGGTCCTTCGTGCTTGAATGCAAGTGAAGACCAACACATGTTTTTTGATTGCAGTTATTCATTGGAGTGTTGGAAGAAGCTGTTTTCCGTTTTCCAACTTCAGTGGGTAATGAGACATTTAAAGAAAATGTTATTTAAGTACTAGTTGGACCTTCGTTGAAGCCTCAGTCTCATTTGCTCTGGGCTAATGCTATCATAACACTTCTTTTAGAAATTTGGTTTGAAAGAAACAAAAGGGTTTTTCATGATAAACCTCTCCTATGGGTGGAGTGTTTTGAAGTGGCACGGTTAAATGCATCCTCATGGTGTTCACTTTCTAAGCTATTTGTTATGTTTGGATAGGGGAGCATTTGTTTTCTCAAAATAGTCATAGTTATAATGTTGGTTTAGTCTTGATTTGATCTATTTAAAGTTCTCCTTGTTTTTTCATATATATACTTGTATTTTGTATCCTTGTATTTGGAGCATTACTCTTTTCATTTCATCAATAAAATTTTTTGTTTTCTTTCCTTCAAAAAAAAAAAAAAAAAAAAAGAAATGGATGACCTGCCAAAATAACGGAAAGGAGCTATAATGAATCGTTTGGGAAAGACAAGGACCAACCAAAAGCCCCCATCATAGTAGTCCAAAAACAATAAGCAAACAAACAATGCATGAAAATATGGCACGAAGTTTCCACACTGGGTTTACACATGAAACAACAAGAAGGAGATAAAACCATATAAGGCATTCACCTTTGTAAATGATCAATCGTATTGGTATCTCCAAGGCTAAGCTCCCAAAGAAAAAAAATTAATCTTCTTTGGATACTTATCCTTCCAAATTGCAATATAAAGGTCTTTAAAAGAGGATCAACAGTGCCCACCAAGTCATCCATGAAGGATTTAATGGTAAAAGAGCTTGAAGGTAATAAAGGCAAAATCCAAATATCTTTTTGGGGAGATCATTAGGAAGGTTGAGGAGATCGAGGAACAGGTTATGTCTTTTTTTCTCGAATCTTTATGGCCACAATGTGTCCCCTAAACCTCTTGTTCAATGGATTGATTGGAGCCCTATTTTTGAGAAGGTGGGGGAAGATCTGATAGGTCCCTTCACTATAGAAGAAATTAAAAGCGTCTTTGGGAGTGATAGGTCGTCCCTTGGGCCGGATGGCTTCTCTTTGGCCTTTATTAAGAAAACTAGGTTTATTAAAGGGGAACCTGGAAAAAGTTTTCAAGTAATTTTCTGGGAGGGACATTTTGAACAGTGTTATGACAAACTTTTGTTTTCCTCATTCTGAAATAGGAGCATGCGAATAAGGTAAGGTTAAGGACTTCAGGCTGATTAGTCTTGTCACTAGTATCTACAAAATTCTCGCCAAAGTTCTCGCTAATCAATTGTAAAGAGTGCTTTCGTCTACAATTTTTGGAGTTGCAAGGGGCTTTTATATCTTGGAGACAGATTTTGGATCAAGCTTTTATTGCTAATGAAGCAATTGAAGATTATAGAGCTTCAACCTAGTTGAGATAGTCGGGTGCGCCTACTGATCCCCGTTCTCTTAGTTTCATTTACCTCTTATGTATCATTGTAATTCGAGCATTAGCCTCTTTTCATTTCATCAATGAAAAGTACTGTTTTTGTTTCACAAAAAATAAAAAAATGAAGATTACAGAGTTACAAATGGAGTGATTTTCAAGATTGACTTTGAGGAAGCTTATGACCATGTGGATCGGGATTTCTCGATTGAGGTGATGGATAAGAAGGGTTTTGGATACAAGTGGAAAATGTGGATGTGGAGTTGTATGAGAACTGTGACTTACTCTTTTCTCATTAATGGGAGTCCTAAATGCAAAGTTTGAGGCTACAAGAGGTCTTAAACAAGGTGATCCTTTATCCCCCTTCTTATTTCTCCTTGTGGTGGTTGTTCTTATAGATTTTTTTTTTCGAAAAGAAAACATGCTTTTCATTGATGTAATAAAAAGAGACTAATGGGTATTTGAACTGTGCCTCGATTCTACAAAGGAAGCTGCCAGCGCAGTGCCTCTCGCCCATCATTTGCTTCCTCTGTTTGGCTGAATCTGAAGATTTACAGCATCTGTTTTTTGAATGTGTTTATGCTAAATGTTGCTGGTTTAGTTTATTCTTCTTCTTCAATCTTTGTTGGGTGTTTGGGAATTTGTTCAGGGATAATATTTTGCAGCTTTTGATGGGTCCAAAGCTTAAGTCAGCCCCTAAAATTTTGTGGAATAATGCGGTCAAAGCAATGCTTTTGGAACTATGGTTCGAAAGGAATCAAAGAGTGTTCCACGACAAAGCTACTCTGTGGGCCAACCGTTTTGAGATTGCCAGGATAAATGCCTCATCATGGAGCACTCTTGCAAAAGATTATGTTGATTACTCCATCCAAGACTTGTGCCTAAATTGGAAAGTGTTTATTTTTCCAGCACCTTAGAGTTTAGTTTGATTCTTAAGGGATTTTATATAATGTATTTCTTTGCCGTTTCTTGTCTTTTAGTTCTTTTGTCTTTGACCCATGTATTCGGGTTTTCCATTTCACGAGTTAGTAGTGGTTATTGGTTTCTTATTTCGTTTACAATTAAATTGGATATGATGAGAGTGCTAAGGAGGTGTCAACCTAGTTGAGATGTCCGGGTGCATTCCCTGGTCCTTAGGCTACTTGTAGGATGTTTCCTAATGATGTACTTCGAGCTTTTGTCTCAATTCATTTTATCAATGAAAGAGACTCGTTTCCTTTTAAAAAAAAAATAAAAAGAGACTAATGCGCAAGATTACAATGAGATAAAAAAAGGAAAAAGCAACTAAAAACAAATACAACCAAAAAGACCAAAGCTGGACAAGTCTGGAAAAACAAAAACAACCAGATACAGCCAAAAAACCAAATCCAAACAATTCCGAAAGAACAATTAGAGACAAATAAGAACAAATCCAAACAATGAGTCTCGCCCATCATTTGCTTCCTCTATTTGGCTGGATCTGAAGATTTACAGCATCTGTTTTTTGAATGTGTTTATGCTAAATGTTGCTGGTTTAGTTTATTCTCCTTCTTCAATCTTTGTTGGGTGTTTGGGAATTCGTTCAGGGATAATATTTTGCAGCTTTTGGTGGGTCCAAAGCTTAAGTCAGCCCCTAAAATTTTGTGGAATAATGCGGTCAAAGCATTGCTTGTGGAATTATGGTTCGAAAGGAATCAAAGGGTGTTCCACGACAAAGCTACTCCGTGGGCCAACCGGTTAGAGATTGCCAGGATAAATGCCTCATCATGGAGCACTCTTGCAAAAGATTACGTTGATTTCTCCATACAAGACTTATGCCTAAATTGGAAAGCGTTTATTTTTCCAGCACCTTAGAGTTCAGTTTGATTCTTAAGGGATTTTATATAATGTATTTCCTTTCAGTCTCTTGTATTTTAGTTCTTTTGTCTTTGAGCCATGTATTTGGGTTTTCCATTTCACTGGATTGAGCTAGTAGTGGTTATTGGCTTCTTATTTCGTTTACAATTATATTGGATATGATGAGAGTGCTAAGGAGGTGTCAACTAGTTGAGATTTCCGAGTGCATTCCCTGATCCTTAGGCTACTTGTAGGATGTTTCCCAATGATGTACTTTGAGCCTTTGTCTCAATTCATTTTATCAATGAAAGAGACTTGTTTCCTTTTAAAAAAAAATTCGACCCGAAACGAAATAAATTGACTTTTTACAACAAGCCCTAGAAACCACCAACTCAAAATTAACGGAACAAATCAACACTATGATGGGGACAACTAGTAGAATAAACTCCAAGGGAGAGGAAGCCTGATTCAACTTTCGCAAGTCTGTAAAACAAATCAAATTAGACCACAGACCAAATCCACAAGACTGAGTTCAAAGTGAGGCCGCCTAAAGCTGATGAAGAAACCCGCCACCTTTGATCGAGACAACTTGGAACCAGCGTATTTACCATATAATTCAACAAACTCCCATCCTATTTCCTTTGTTCTCCCAAAGGCGCTTAAGTCCCTATGTGAACCAAGAAACAAATTTCATATTAAAACTGTGACAAATTCCACAGCCAGACTGATTGAGAGGGGTCGGATTATCCTATAACAAGTCCACACTATGCAATTATGGACTTTAAATGTGCAGGAATATCCGACTGAGGCAGTGGCTTAAGGCAAGAGTTCCAACCCTCTTCTGTTTGCTGCCCTTCAATTTGAAATATAGAATTGGCCTACGACAATTCTTAGTAGAATTAAATGTGCAGGAATATCCGACTGAGATGTTCTTAGTAGAATTGTAACTGAATATGTAGGTGGCAACTTTTTTTAGCCCTTTGAGGTGGGGAAGGATAGGGTGGCCCTTTCCCAACTGCAATTGGCCTATGACAAGATCTTTTTCTGTTCTGGAAATGATGATTCGTTCTTAATTTTGATCACATTTTGACTTTTTTCAAAGATATGTCTGGGCATAGGAGTGAATGCTTTGTTATGTGGCTAAATTGTTTTATTTGGACAAGAGACAATTTCATTGATAAATGAAATATCCGAAGATATCCAAGACTACAAAGGAACCATTCATATGGTATTTAAAAAGTGTTTCTAATTAGCAATAAGGAAAGAAAAACTATGTCATTTTAAAATTGATATAACTTGACAAAAAAAAAAAGCATTAAATATGGCAGAGTCGAAGATGTCTTTTGAAGTCTTGTATTTCTCCGAGAAGATACGAGCATATCTTTCATCCCATATCTTACACAAAACTGCAGAAATAATGCAATTACTTTCATCCCATATCTTACACAAAACTGCAGAAATAATGCACTTCCATAATTGCTCTTTAGATGCTCTGAAAGGAAGATCAATGAACAATAATCTGAACCAACTAAGTGTGTCATTTGGTAAGACCAAATGAAAAAACAATTGAAGAACAAATCAAAAGCTGTAAAAACTTCCAATCAAAAGCTGTAAAAATTTCCGAGCAAATCTCTGTTGTGAAGGAGCAATTGAAGAACAAGTGCAAGGTGGATTCATTGTTGGATTGACAAAGACTGCACTGGGAAGGAGAAACTTGGATCCAGGGGCAGCGATATTGAAGACAGTCCATTGTATTAAGGCAAGAATTAACAATTTCCCACAATAGGAAATTAACACGGTTTGGGCAAGGGCACTTCCAAACTTTCTGGAATAAATCTGTATCAAAAGAAAGTCCATGTGGACTAATGCTTCTGTACAAAGATTTGGTGGAGAAATCAACTTTGTCAAGCTTCCATGACCATGAATCACTATTGTCCGAAAGATCAATGATGGGCATGCAATGAGTGAAATCAGCCCATTCAATAATCTCTTCCTCGGTAAAAAGCCTTATGAAATTAATGTTCCATGAACATAGGTTTGAATCTCAAACCTCAGCCACAGGTGCTCCTTTATCTCTTGCAAGATGGTAGAGTTCGGGTTATTTCTGCTTAAGGGTGCCATCAGCAGTCCAGAAATCATGCCCAAAGGCAGTAGCCTCACCATTGCCGATGTTGCATTGAGTATTCTCATAGATGAGGTCTTTCTGTTTCATAATGTGATTCCATGGGCTTCTCAAAAATCAGCTGAGAATGCGAACACTAGGTGCTTAAGAAAACAACAAAGTAAAATCTCGAAGAAGCTTGGTTAAGTGTTTACTCAAGAATATTCTCCTCTTTGCAACTTTCAAGCCTATTCCTCGAGTTCTTATGCCGTTATTATTATACAGTATAATTAAACTTGAAAATTATATGAGAGAGCTGAAAGGACAGTGGAGATTACAAGAAATCATCCGGATGGTGTAAATGTTCCAATGCTTTACTTTCAGGGATGTTTGCATTTCAATTATGTAGCAAATGATCCCATGCTTTACCTTCACGTATGCATAAAATGGACCAAGGGATGGATACTAATGAGTTATTTCTTCAGTGGGAAGATCTATAATGTATTTTCTAACCCAGAAGCCAAAGAAGCCCTTCAATCATATAAATCCATTGAACCAAGAAACAAGTTTTGCTTTCATGGGTTATAGACCAGAAAAGAAAAAAGGACTTCTTACAAAAGCTTTAGAGTTTAAATTCTCTTTTCGCTTGTGATATTCTTATCACCCCCCCCCCCCCCCCCCCCCCCCAACAAAAAAAAAAAAAAGAAAAAGATAATGTTAACTTTTTATTGATTGCACTCTCTCTTGGTGTATGATATAGGTTATATTAGCACATCTATCAATGATGGCCCAGGATGTCTAATGTTGCGATGTCCAGATCCATCTTGTGGTGCTGCTGTTGGTCAAGATATGATAAATTTATTAGCTTCTGATGATGACAAAAAGAAGTACTTCCGCTATTTTGTTCGATCCTATGTTGAAGACAATAGGAAGGTATTTTGCAATTTGAACTCTTATGCATACAAATACTTTTCATTGTAATACACATGAATAACTTAAATAATCACAAGTCATGCATTGAAATGTAGGATGTTCTGTGGTTCATAACCACATTTGAGGAATATACATTTGTTTCTTAA

mRNA sequence

ATGGAATCGGAGGACGAGCTCGACATGCACGATGCCCATGACGACGACGACTCTGTTGACAATGAGGAGGACTTCTACAGTGGCGGCGACGACGATGCTGCCGCCATCGACAGCGACGATGCTGATGTCGGTGATTACGAGTTTGTTGATAATGATTCCGACGATTCCGACGACATGGTCTCCTATCGCCACCAGATAGTAGAGAGGGAAGGCGAATCCGATGAAACCCGTGAGAACGGCAAAGAGATAAAATTGATGGAAACAAAAGAAAAGAAGGGAGGTGATGATGGGTTCCAAGGCAGAGGAGAAAAAGAAAAAAAGGATGGTGACTCGAAGATGGAGGAATCAGAGGAAAATGGTCAGGAAGAAGATGGAAGGAAGAAGCATCACCTTCTTCTTTTGTTCAATGTTGTAGCTTTGGTATCTATTGTTCACTGGGCTAAGTTTTGGCCTCAGTTTGTAGTGGAGTTAGTTTTTGCTCTGTTTGGATATGATGAGGGTGCTAAGGGGGTGTGCGAGGACCTTCATCCTTCGGGGAGAATCGAACACAAGGTGATCGAAGCCTCGTCGGGCGAGAAAGAGAAGGAGAAGGTTGACGATCCAAAGAGACTTATGAAGACGTTAGGTGAAGATGGAATCTTCAGCGGCGACGTTAGGAGTGTTAGTAAAGTGCATGATGAATGGTTTGCAGATGAAGAAAAGGTCCGTAGATCTGTTGGCTTACTAGAAAAACCAGTTTTGCGACATTCAAATGAACTAGAACTACCTTGTGGTATATGTTTTGAAATCTATTCACGTGATAAGATCCAGTCTGCTTCTTGTGGCCATCCATTCTGCAATGCATGTTGGACAGGAAGGAATCTAGTAGTAGTTGGAGGTGAAAAGCCAACGTCAAATGGGCTAAGGAAGGAGATTGCAACACTTTCTTTTTTCATTGAGTGGCAAGTGGTCGAAAAGGGTGCCATCAGCAGTCCAGAAATCATGCCCAAAGGCAGTAGCCTCACCATTGCCGATGTTGCATTGAGTATTCTCATAGATGAGGTCTTTCTGTTTCATAATGTGATTCCATGGGCTTCTCAAAAATCAGCTGAGAATGCGAACACTAGGTGCTTAAGAAAACAACAAAGTTATATTAGCACATCTATCAATGATGGCCCAGGATGTCTAATGTTGCGATGTCCAGATCCATCTTGTGGTGCTGCTGTTGGTCAAGATATGATAAATTTATTAGCTTCTGATGATGACAAAAAGAAGTACTTCCGCTATTTTGTTCGATCCTATGTTGAAGACAATAGGAAGGATGTTCTGTGGTTCATAACCACATTTGAGGAATATACATTTGTTTCTTAA

Coding sequence (CDS)

ATGGAATCGGAGGACGAGCTCGACATGCACGATGCCCATGACGACGACGACTCTGTTGACAATGAGGAGGACTTCTACAGTGGCGGCGACGACGATGCTGCCGCCATCGACAGCGACGATGCTGATGTCGGTGATTACGAGTTTGTTGATAATGATTCCGACGATTCCGACGACATGGTCTCCTATCGCCACCAGATAGTAGAGAGGGAAGGCGAATCCGATGAAACCCGTGAGAACGGCAAAGAGATAAAATTGATGGAAACAAAAGAAAAGAAGGGAGGTGATGATGGGTTCCAAGGCAGAGGAGAAAAAGAAAAAAAGGATGGTGACTCGAAGATGGAGGAATCAGAGGAAAATGGTCAGGAAGAAGATGGAAGGAAGAAGCATCACCTTCTTCTTTTGTTCAATGTTGTAGCTTTGGTATCTATTGTTCACTGGGCTAAGTTTTGGCCTCAGTTTGTAGTGGAGTTAGTTTTTGCTCTGTTTGGATATGATGAGGGTGCTAAGGGGGTGTGCGAGGACCTTCATCCTTCGGGGAGAATCGAACACAAGGTGATCGAAGCCTCGTCGGGCGAGAAAGAGAAGGAGAAGGTTGACGATCCAAAGAGACTTATGAAGACGTTAGGTGAAGATGGAATCTTCAGCGGCGACGTTAGGAGTGTTAGTAAAGTGCATGATGAATGGTTTGCAGATGAAGAAAAGGTCCGTAGATCTGTTGGCTTACTAGAAAAACCAGTTTTGCGACATTCAAATGAACTAGAACTACCTTGTGGTATATGTTTTGAAATCTATTCACGTGATAAGATCCAGTCTGCTTCTTGTGGCCATCCATTCTGCAATGCATGTTGGACAGGAAGGAATCTAGTAGTAGTTGGAGGTGAAAAGCCAACGTCAAATGGGCTAAGGAAGGAGATTGCAACACTTTCTTTTTTCATTGAGTGGCAAGTGGTCGAAAAGGGTGCCATCAGCAGTCCAGAAATCATGCCCAAAGGCAGTAGCCTCACCATTGCCGATGTTGCATTGAGTATTCTCATAGATGAGGTCTTTCTGTTTCATAATGTGATTCCATGGGCTTCTCAAAAATCAGCTGAGAATGCGAACACTAGGTGCTTAAGAAAACAACAAAGTTATATTAGCACATCTATCAATGATGGCCCAGGATGTCTAATGTTGCGATGTCCAGATCCATCTTGTGGTGCTGCTGTTGGTCAAGATATGATAAATTTATTAGCTTCTGATGATGACAAAAAGAAGTACTTCCGCTATTTTGTTCGATCCTATGTTGAAGACAATAGGAAGGATGTTCTGTGGTTCATAACCACATTTGAGGAATATACATTTGTTTCTTAA

Protein sequence

MESEDELDMHDAHDDDDSVDNEEDFYSGGDDDAAAIDSDDADVGDYEFVDNDSDDSDDMVSYRHQIVEREGESDETRENGKEIKLMETKEKKGGDDGFQGRGEKEKKDGDSKMEESEENGQEEDGRKKHHLLLLFNVVALVSIVHWAKFWPQFVVELVFALFGYDEGAKGVCEDLHPSGRIEHKVIEASSGEKEKEKVDDPKRLMKTLGEDGIFSGDVRSVSKVHDEWFADEEKVRRSVGLLEKPVLRHSNELELPCGICFEIYSRDKIQSASCGHPFCNACWTGRNLVVVGGEKPTSNGLRKEIATLSFFIEWQVVEKGAISSPEIMPKGSSLTIADVALSILIDEVFLFHNVIPWASQKSAENANTRCLRKQQSYISTSINDGPGCLMLRCPDPSCGAAVGQDMINLLASDDDKKKYFRYFVRSYVEDNRKDVLWFITTFEEYTFVS

Homology

[Close]

BLAST of HG10006003 vs. NCBI nr
Match: XP_038890077.1 (probable E3 ubiquitin-protein ligase ARI8 isoform X1 [Benincasa hispida])

HSP 1 Score: 282.3 bits (721), Expect = 7.1e-72
Identity = 194/434 (44.70%), Postives = 206/434 (47.47%), Query Frame = 0


Query: 1   MESEDELDMHDAH-DDDDSVDNEEDFYSGGDDDAAAIDSDDADVGDYEFVDNDSDDSDDM 60
           MESEDELDMHDAH DDDDSVDNEEDFYSGGDDDAAAIDSDDADVGDYEFVDNDSDDSDDM
Sbjct: 1   MESEDELDMHDAHDDDDDSVDNEEDFYSGGDDDAAAIDSDDADVGDYEFVDNDSDDSDDM 60

Query: 61  VSYRHQIVEREGESDETRENGKEIKLMETKEKKGGDDGFQGRGEKEKKDGDSKMEESEEN 120
           VSYRHQ                                         ++     E   + 
Sbjct: 61  VSYRHQ-----------------------------------------QNYVILAEADIQQ 120

Query: 121 GQEEDGRKKHHLLLLFNVVALVSIVHWAKFWPQFVVELVFALFGYDEGAKGVCEDLHPSG 180
            QEED  +   +L +  V A + + ++   W                             
Sbjct: 121 RQEEDIMRVSTVLSISKVAASILLRYYN--W----------------------------- 180

Query: 181 RIEHKVIEASSGEKEKEKVDDPKRLMKTLGEDGIFSGDVRSVSKVHDEWFADEEKVRRSV 240
                                                   SVSKVHDEWFADEEKVRRSV
Sbjct: 181 ----------------------------------------SVSKVHDEWFADEEKVRRSV 231

Query: 241 GLLEKPVLRHSNELELPCGICFEIYSRDKIQSASCGHPFCNACWTGRNLVVVGGEKPTSN 300
           GLLEKP+LRHSNE ELPCGICFEIYSRDKIQSA+CGHPFCNACWTG              
Sbjct: 241 GLLEKPILRHSNEAELPCGICFEIYSRDKIQSAACGHPFCNACWTG-------------- 231

Query: 301 GLRKEIATLSFFIEWQVVEKGAISSPEIMPKGSSLTIADVALSILIDEVFLFHNVIPWAS 360
                                                                       
Sbjct: 301 ------------------------------------------------------------ 231

Query: 361 QKSAENANTRCLRKQQSYISTSINDGPGCLMLRCPDPSCGAAVGQDMINLLASDDDKKKY 420
                            YISTSINDGPGCLMLRCPDPSCGAAVGQDMINLLASDDDKKKY
Sbjct: 361 -----------------YISTSINDGPGCLMLRCPDPSCGAAVGQDMINLLASDDDKKKY 231

Query: 421 FRYFVRSYVEDNRK 434
           FRYFVRSYVEDNRK
Sbjct: 421 FRYFVRSYVEDNRK 231

[Close]

BLAST of HG10006003 vs. NCBI nr
Match: XP_031736775.1 (probable E3 ubiquitin-protein ligase ARI8 isoform X4 [Cucumis sativus])

HSP 1 Score: 276.6 bits (706), Expect = 3.9e-70
Identity = 191/437 (43.71%), Postives = 204/437 (46.68%), Query Frame = 0


Query: 1   MESEDELDMHDAH-DDDDSVDNEEDFYSGGDDDAAAIDSDDADVGDYEFVDNDSDDSDDM 60
           MESEDELDMHDAH DDDDSVDNEEDFYSGGDDDAA IDSDDADVGDYEFVDNDSDDSDDM
Sbjct: 1   MESEDELDMHDAHDDDDDSVDNEEDFYSGGDDDAAGIDSDDADVGDYEFVDNDSDDSDDM 60

Query: 61  VSYRHQ---IVEREGESDETRENGKEIKLMETKEKKGGDDGFQGRGEKEKKDGDSKMEES 120
           VSYRHQ   I+  E +  +                                         
Sbjct: 61  VSYRHQQNYIILAEADIQQC---------------------------------------- 120

Query: 121 EENGQEEDGRKKHHLLLLFNVVALVSIVHWAKFWPQFVVELVFALFGYDEGAKGVCEDLH 180
               QEED  +   +L +  V A + + ++   W                          
Sbjct: 121 ----QEEDITRVSTVLSISKVAASILLRYYN--W-------------------------- 180

Query: 181 PSGRIEHKVIEASSGEKEKEKVDDPKRLMKTLGEDGIFSGDVRSVSKVHDEWFADEEKVR 240
                                                      SVSKVHDEWFADEEKVR
Sbjct: 181 -------------------------------------------SVSKVHDEWFADEEKVR 231

Query: 241 RSVGLLEKPVLRHSNELELPCGICFEIYSRDKIQSASCGHPFCNACWTGRNLVVVGGEKP 300
           RSVGLL+KPVLRHSNELELPCGICFEIY  DKIQSA+CGHPFCNACWTG           
Sbjct: 241 RSVGLLQKPVLRHSNELELPCGICFEIYPLDKIQSAACGHPFCNACWTG----------- 231

Query: 301 TSNGLRKEIATLSFFIEWQVVEKGAISSPEIMPKGSSLTIADVALSILIDEVFLFHNVIP 360
                                                                       
Sbjct: 301 ------------------------------------------------------------ 231

Query: 361 WASQKSAENANTRCLRKQQSYISTSINDGPGCLMLRCPDPSCGAAVGQDMINLLASDDDK 420
                               YISTSINDGPGCLMLRCPDPSCGAAVGQDMINLL SDD+K
Sbjct: 361 --------------------YISTSINDGPGCLMLRCPDPSCGAAVGQDMINLLVSDDEK 231

Query: 421 KKYFRYFVRSYVEDNRK 434
           KKYFRYFVRSYVEDNRK
Sbjct: 421 KKYFRYFVRSYVEDNRK 231

[Close]

BLAST of HG10006003 vs. NCBI nr
Match: XP_031736774.1 (probable E3 ubiquitin-protein ligase ARI8 isoform X3 [Cucumis sativus])

HSP 1 Score: 276.6 bits (706), Expect = 3.9e-70
Identity = 191/437 (43.71%), Postives = 204/437 (46.68%), Query Frame = 0


Query: 1   MESEDELDMHDAH-DDDDSVDNEEDFYSGGDDDAAAIDSDDADVGDYEFVDNDSDDSDDM 60
           MESEDELDMHDAH DDDDSVDNEEDFYSGGDDDAA IDSDDADVGDYEFVDNDSDDSDDM
Sbjct: 1   MESEDELDMHDAHDDDDDSVDNEEDFYSGGDDDAAGIDSDDADVGDYEFVDNDSDDSDDM 60

Query: 61  VSYRHQ---IVEREGESDETRENGKEIKLMETKEKKGGDDGFQGRGEKEKKDGDSKMEES 120
           VSYRHQ   I+  E +  +                                         
Sbjct: 61  VSYRHQQNYIILAEADIQQC---------------------------------------- 120

Query: 121 EENGQEEDGRKKHHLLLLFNVVALVSIVHWAKFWPQFVVELVFALFGYDEGAKGVCEDLH 180
               QEED  +   +L +  V A + + ++   W                          
Sbjct: 121 ----QEEDITRVSTVLSISKVAASILLRYYN--W-------------------------- 180

Query: 181 PSGRIEHKVIEASSGEKEKEKVDDPKRLMKTLGEDGIFSGDVRSVSKVHDEWFADEEKVR 240
                                                      SVSKVHDEWFADEEKVR
Sbjct: 181 -------------------------------------------SVSKVHDEWFADEEKVR 231

Query: 241 RSVGLLEKPVLRHSNELELPCGICFEIYSRDKIQSASCGHPFCNACWTGRNLVVVGGEKP 300
           RSVGLL+KPVLRHSNELELPCGICFEIY  DKIQSA+CGHPFCNACWTG           
Sbjct: 241 RSVGLLQKPVLRHSNELELPCGICFEIYPLDKIQSAACGHPFCNACWTG----------- 231

Query: 301 TSNGLRKEIATLSFFIEWQVVEKGAISSPEIMPKGSSLTIADVALSILIDEVFLFHNVIP 360
                                                                       
Sbjct: 301 ------------------------------------------------------------ 231

Query: 361 WASQKSAENANTRCLRKQQSYISTSINDGPGCLMLRCPDPSCGAAVGQDMINLLASDDDK 420
                               YISTSINDGPGCLMLRCPDPSCGAAVGQDMINLL SDD+K
Sbjct: 361 --------------------YISTSINDGPGCLMLRCPDPSCGAAVGQDMINLLVSDDEK 231

Query: 421 KKYFRYFVRSYVEDNRK 434
           KKYFRYFVRSYVEDNRK
Sbjct: 421 KKYFRYFVRSYVEDNRK 231

[Close]

BLAST of HG10006003 vs. NCBI nr
Match: XP_004138892.1 (probable E3 ubiquitin-protein ligase ARI8 isoform X2 [Cucumis sativus])

HSP 1 Score: 276.6 bits (706), Expect = 3.9e-70
Identity = 191/437 (43.71%), Postives = 204/437 (46.68%), Query Frame = 0


Query: 1   MESEDELDMHDAH-DDDDSVDNEEDFYSGGDDDAAAIDSDDADVGDYEFVDNDSDDSDDM 60
           MESEDELDMHDAH DDDDSVDNEEDFYSGGDDDAA IDSDDADVGDYEFVDNDSDDSDDM
Sbjct: 1   MESEDELDMHDAHDDDDDSVDNEEDFYSGGDDDAAGIDSDDADVGDYEFVDNDSDDSDDM 60

Query: 61  VSYRHQ---IVEREGESDETRENGKEIKLMETKEKKGGDDGFQGRGEKEKKDGDSKMEES 120
           VSYRHQ   I+  E +  +                                         
Sbjct: 61  VSYRHQQNYIILAEADIQQC---------------------------------------- 120

Query: 121 EENGQEEDGRKKHHLLLLFNVVALVSIVHWAKFWPQFVVELVFALFGYDEGAKGVCEDLH 180
               QEED  +   +L +  V A + + ++   W                          
Sbjct: 121 ----QEEDITRVSTVLSISKVAASILLRYYN--W-------------------------- 180

Query: 181 PSGRIEHKVIEASSGEKEKEKVDDPKRLMKTLGEDGIFSGDVRSVSKVHDEWFADEEKVR 240
                                                      SVSKVHDEWFADEEKVR
Sbjct: 181 -------------------------------------------SVSKVHDEWFADEEKVR 231

Query: 241 RSVGLLEKPVLRHSNELELPCGICFEIYSRDKIQSASCGHPFCNACWTGRNLVVVGGEKP 300
           RSVGLL+KPVLRHSNELELPCGICFEIY  DKIQSA+CGHPFCNACWTG           
Sbjct: 241 RSVGLLQKPVLRHSNELELPCGICFEIYPLDKIQSAACGHPFCNACWTG----------- 231

Query: 301 TSNGLRKEIATLSFFIEWQVVEKGAISSPEIMPKGSSLTIADVALSILIDEVFLFHNVIP 360
                                                                       
Sbjct: 301 ------------------------------------------------------------ 231

Query: 361 WASQKSAENANTRCLRKQQSYISTSINDGPGCLMLRCPDPSCGAAVGQDMINLLASDDDK 420
                               YISTSINDGPGCLMLRCPDPSCGAAVGQDMINLL SDD+K
Sbjct: 361 --------------------YISTSINDGPGCLMLRCPDPSCGAAVGQDMINLLVSDDEK 231

Query: 421 KKYFRYFVRSYVEDNRK 434
           KKYFRYFVRSYVEDNRK
Sbjct: 421 KKYFRYFVRSYVEDNRK 231

[Close]

BLAST of HG10006003 vs. NCBI nr
Match: XP_031736773.1 (probable E3 ubiquitin-protein ligase ARI8 isoform X1 [Cucumis sativus])

HSP 1 Score: 276.6 bits (706), Expect = 3.9e-70
Identity = 191/437 (43.71%), Postives = 204/437 (46.68%), Query Frame = 0


Query: 1   MESEDELDMHDAH-DDDDSVDNEEDFYSGGDDDAAAIDSDDADVGDYEFVDNDSDDSDDM 60
           MESEDELDMHDAH DDDDSVDNEEDFYSGGDDDAA IDSDDADVGDYEFVDNDSDDSDDM
Sbjct: 1   MESEDELDMHDAHDDDDDSVDNEEDFYSGGDDDAAGIDSDDADVGDYEFVDNDSDDSDDM 60

Query: 61  VSYRHQ---IVEREGESDETRENGKEIKLMETKEKKGGDDGFQGRGEKEKKDGDSKMEES 120
           VSYRHQ   I+  E +  +                                         
Sbjct: 61  VSYRHQQNYIILAEADIQQC---------------------------------------- 120

Query: 121 EENGQEEDGRKKHHLLLLFNVVALVSIVHWAKFWPQFVVELVFALFGYDEGAKGVCEDLH 180
               QEED  +   +L +  V A + + ++   W                          
Sbjct: 121 ----QEEDITRVSTVLSISKVAASILLRYYN--W-------------------------- 180

Query: 181 PSGRIEHKVIEASSGEKEKEKVDDPKRLMKTLGEDGIFSGDVRSVSKVHDEWFADEEKVR 240
                                                      SVSKVHDEWFADEEKVR
Sbjct: 181 -------------------------------------------SVSKVHDEWFADEEKVR 231

Query: 241 RSVGLLEKPVLRHSNELELPCGICFEIYSRDKIQSASCGHPFCNACWTGRNLVVVGGEKP 300
           RSVGLL+KPVLRHSNELELPCGICFEIY  DKIQSA+CGHPFCNACWTG           
Sbjct: 241 RSVGLLQKPVLRHSNELELPCGICFEIYPLDKIQSAACGHPFCNACWTG----------- 231

Query: 301 TSNGLRKEIATLSFFIEWQVVEKGAISSPEIMPKGSSLTIADVALSILIDEVFLFHNVIP 360
                                                                       
Sbjct: 301 ------------------------------------------------------------ 231

Query: 361 WASQKSAENANTRCLRKQQSYISTSINDGPGCLMLRCPDPSCGAAVGQDMINLLASDDDK 420
                               YISTSINDGPGCLMLRCPDPSCGAAVGQDMINLL SDD+K
Sbjct: 361 --------------------YISTSINDGPGCLMLRCPDPSCGAAVGQDMINLLVSDDEK 231

Query: 421 KKYFRYFVRSYVEDNRK 434
           KKYFRYFVRSYVEDNRK
Sbjct: 421 KKYFRYFVRSYVEDNRK 231

[Close]

BLAST of HG10006003 vs. ExPASy Swiss-Prot
Match: Q8W468 (Probable E3 ubiquitin-protein ligase ARI8 OS=Arabidopsis thaliana OX=3702 GN=ARI8 PE=2 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 2.2e-39
Identity = 91/213 (42.72%), Postives = 104/213 (48.83%), Query Frame = 0


Query: 221 VSKVHDEWFADEEKVRRSVGLLEKPVLRHSNELELPCGICFEIYSRDKIQSASCGHPFCN 280
           VS+VHDEWFADEEKVR +VGLLEKPV+    + EL CGICFE +  DK+ +A+CGHPFC+
Sbjct: 92  VSRVHDEWFADEEKVRDAVGLLEKPVVDFPTDGELDCGICFETFLSDKLHAAACGHPFCD 151

Query: 281 ACWTGRNLVVVGGEKPTSNGLRKEIATLSFFIEWQVVEKGAISSPEIMPKGSSLTIADVA 340
           +CW G                                                       
Sbjct: 152 SCWEG------------------------------------------------------- 211

Query: 341 LSILIDEVFLFHNVIPWASQKSAENANTRCLRKQQSYISTSINDGPGCLMLRCPDPSCGA 400
                                               YI+T+INDGPGCL LRCPDPSC A
Sbjct: 212 ------------------------------------YITTAINDGPGCLTLRCPDPSCRA 213

Query: 401 AVGQDMINLLASDDDKKKYFRYFVRSYVEDNRK 434
           AVGQDMINLLA D DK+KY  YFVRSYVEDNRK
Sbjct: 272 AVGQDMINLLAPDKDKQKYTSYFVRSYVEDNRK 213

[Close]

BLAST of HG10006003 vs. ExPASy Swiss-Prot
Match: Q8L829 (Probable E3 ubiquitin-protein ligase ARI5 OS=Arabidopsis thaliana OX=3702 GN=ARI5 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.2e-36
Identity = 85/214 (39.72%), Postives = 105/214 (49.07%), Query Frame = 0


Query: 220 SVSKVHDEWFADEEKVRRSVGLLEKPVLRHSNELELPCGICFEIYSRDKIQSASCGHPFC 279
           SVSKV+DEWFADEE+VRR+VG+LE PV+   +  E  CGICF+ Y+ ++I S SCGHPFC
Sbjct: 95  SVSKVNDEWFADEERVRRTVGILEGPVVTTPDGREFTCGICFDSYTLEEIVSVSCGHPFC 154

Query: 280 NACWTGRNLVVVGGEKPTSNGLRKEIATLSFFIEWQVVEKGAISSPEIMPKGSSLTIADV 339
             CWTG                                                      
Sbjct: 155 ATCWTG------------------------------------------------------ 214

Query: 340 ALSILIDEVFLFHNVIPWASQKSAENANTRCLRKQQSYISTSINDGPGCLMLRCPDPSCG 399
                                                YIST+INDGPGCLML+CPDPSC 
Sbjct: 215 -------------------------------------YISTTINDGPGCLMLKCPDPSCP 217

Query: 400 AAVGQDMINLLASDDDKKKYFRYFVRSYVEDNRK 434
           AA+G+DMI+ LAS +DK+KY+RYF+RSYVE NR+
Sbjct: 275 AAIGRDMIDKLASKEDKEKYYRYFLRSYVEVNRE 217

[Close]

BLAST of HG10006003 vs. ExPASy Swiss-Prot
Match: P0C8K8 (Putative E3 ubiquitin-protein ligase ARI6 OS=Arabidopsis thaliana OX=3702 GN=ARI6 PE=5 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.2e-31
Identity = 80/214 (37.38%), Postives = 98/214 (45.79%), Query Frame = 0


Query: 220 SVSKVHDEWFADEEKVRRSVGLLEKPVLRHSNELELPCGICFEIYSRDKIQSASCGHPFC 279
           SVSKV+DEWFADE++VRR+VG+LE P     +  E  CGICFE Y  ++  S SCGHPFC
Sbjct: 99  SVSKVNDEWFADEDRVRRTVGILEGPA---PDGREFTCGICFESYPLEETISVSCGHPFC 158

Query: 280 NACWTGRNLVVVGGEKPTSNGLRKEIATLSFFIEWQVVEKGAISSPEIMPKGSSLTIADV 339
             CWTG                                                      
Sbjct: 159 ATCWTG------------------------------------------------------ 218

Query: 340 ALSILIDEVFLFHNVIPWASQKSAENANTRCLRKQQSYISTSINDGPGCLMLRCPDPSCG 399
                                                YISTSINDGPGCLML+CP P C 
Sbjct: 219 -------------------------------------YISTSINDGPGCLMLKCPYPCCP 218

Query: 400 AAVGQDMINLLASDDDKKKYFRYFVRSYVEDNRK 434
           AA+G+DMI+ L S +DK++Y+RYF+RSYVE NR+
Sbjct: 279 AAIGRDMIDNLCSKEDKERYYRYFLRSYVEVNRE 218

[Close]

BLAST of HG10006003 vs. ExPASy Swiss-Prot
Match: Q9SKC4 (Probable E3 ubiquitin-protein ligase ARI10 OS=Arabidopsis thaliana OX=3702 GN=ARI10 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 6.3e-31
Identity = 73/214 (34.11%), Postives = 98/214 (45.79%), Query Frame = 0


Query: 221 VSKVHDEWFADEEKVRRSVGLLEKPVLR-HSNELELPCGICFEIYSRDKIQSASCGHPFC 280
           VSK+ DEWF DEE++R++VG+L++PV+  +  E+++ CGICFE Y+R +I S SCGHP+C
Sbjct: 84  VSKLEDEWFTDEERIRKTVGILKEPVVDVNGTEVDIQCGICFESYTRKEIASVSCGHPYC 143

Query: 281 NACWTGRNLVVVGGEKPTSNGLRKEIATLSFFIEWQVVEKGAISSPEIMPKGSSLTIADV 340
             CWTG                                                      
Sbjct: 144 KTCWTG------------------------------------------------------ 203

Query: 341 ALSILIDEVFLFHNVIPWASQKSAENANTRCLRKQQSYISTSINDGPGCLMLRCPDPSCG 400
                                                YI+T I DGPGCL ++CP+PSC 
Sbjct: 204 -------------------------------------YITTKIEDGPGCLRVKCPEPSCY 206

Query: 401 AAVGQDMINLLASDDDKKKYFRYFVRSYVEDNRK 434
           A VGQDMI+ +    DK KY+RYF+RSYVED +K
Sbjct: 264 AVVGQDMIDEVTEKKDKDKYYRYFLRSYVEDGKK 206

[Close]

BLAST of HG10006003 vs. ExPASy Swiss-Prot
Match: Q9SKC2 (Probable E3 ubiquitin-protein ligase ARI11 OS=Arabidopsis thaliana OX=3702 GN=ARI11 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 2.4e-30
Identity = 72/214 (33.64%), Postives = 97/214 (45.33%), Query Frame = 0


Query: 221 VSKVHDEWFADEEKVRRSVGLLEKPVLR-HSNELELPCGICFEIYSRDKIQSASCGHPFC 280
           VSK+ DEWF DEE++R++VG+L++PV+  +  E+++ CGICFE Y+R +I   SCGHP+C
Sbjct: 102 VSKLEDEWFTDEERIRKTVGILKEPVVDVNGTEVDIQCGICFESYTRKEIARVSCGHPYC 161

Query: 281 NACWTGRNLVVVGGEKPTSNGLRKEIATLSFFIEWQVVEKGAISSPEIMPKGSSLTIADV 340
             CWTG                                                      
Sbjct: 162 KTCWTG------------------------------------------------------ 221

Query: 341 ALSILIDEVFLFHNVIPWASQKSAENANTRCLRKQQSYISTSINDGPGCLMLRCPDPSCG 400
                                                YI+T I DGPGCL ++CP+PSC 
Sbjct: 222 -------------------------------------YITTKIEDGPGCLRVKCPEPSCY 224

Query: 401 AAVGQDMINLLASDDDKKKYFRYFVRSYVEDNRK 434
           A VGQDMI+ +    DK KY+RYF+RSYVED +K
Sbjct: 282 AVVGQDMIDEVTEKKDKDKYYRYFLRSYVEDGKK 224

[Close]

BLAST of HG10006003 vs. ExPASy TrEMBL
Match: A0A1S3B4Y9 (RBR-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103485827 PE=3 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 1.6e-69
Identity = 189/437 (43.25%), Postives = 203/437 (46.45%), Query Frame = 0


Query: 1   MESEDELDMHDAH-DDDDSVDNEEDFYSGGDDDAAAIDSDDADVGDYEFVDNDSDDSDDM 60
           MESEDELDMHDAH DDDDSVDNEEDFYSGGDDDAA IDSDDADVGDYEFVDNDSDDSDDM
Sbjct: 1   MESEDELDMHDAHDDDDDSVDNEEDFYSGGDDDAAGIDSDDADVGDYEFVDNDSDDSDDM 60

Query: 61  VSYRHQ---IVEREGESDETRENGKEIKLMETKEKKGGDDGFQGRGEKEKKDGDSKMEES 120
           VSYRHQ   I+  E +  +                                         
Sbjct: 61  VSYRHQQNYIILAEADIQQC---------------------------------------- 120

Query: 121 EENGQEEDGRKKHHLLLLFNVVALVSIVHWAKFWPQFVVELVFALFGYDEGAKGVCEDLH 180
               QEED  +   +L +  V A + + ++   W                          
Sbjct: 121 ----QEEDITRVSTVLSISKVAASILLRYYN--W-------------------------- 180

Query: 181 PSGRIEHKVIEASSGEKEKEKVDDPKRLMKTLGEDGIFSGDVRSVSKVHDEWFADEEKVR 240
                                                      SVSKVHDEWFADEEKVR
Sbjct: 181 -------------------------------------------SVSKVHDEWFADEEKVR 231

Query: 241 RSVGLLEKPVLRHSNELELPCGICFEIYSRDKIQSASCGHPFCNACWTGRNLVVVGGEKP 300
           RSVGLL+KPVLRHSNELELPCGICFEIY  DKIQSA+CGHPFCNACWTG           
Sbjct: 241 RSVGLLQKPVLRHSNELELPCGICFEIYPLDKIQSAACGHPFCNACWTG----------- 231

Query: 301 TSNGLRKEIATLSFFIEWQVVEKGAISSPEIMPKGSSLTIADVALSILIDEVFLFHNVIP 360
                                                                       
Sbjct: 301 ------------------------------------------------------------ 231

Query: 361 WASQKSAENANTRCLRKQQSYISTSINDGPGCLMLRCPDPSCGAAVGQDMINLLASDDDK 420
                               YISTSINDGPGCLMLRCPDPSCGAA+ QDMINLL S+DDK
Sbjct: 361 --------------------YISTSINDGPGCLMLRCPDPSCGAAIDQDMINLLVSEDDK 231

Query: 421 KKYFRYFVRSYVEDNRK 434
           KKYFRYFVRSYVEDNRK
Sbjct: 421 KKYFRYFVRSYVEDNRK 231

[Close]

BLAST of HG10006003 vs. ExPASy TrEMBL
Match: A0A1S3B4U8 (RBR-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103485827 PE=3 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 1.6e-69
Identity = 189/437 (43.25%), Postives = 203/437 (46.45%), Query Frame = 0


Query: 1   MESEDELDMHDAH-DDDDSVDNEEDFYSGGDDDAAAIDSDDADVGDYEFVDNDSDDSDDM 60
           MESEDELDMHDAH DDDDSVDNEEDFYSGGDDDAA IDSDDADVGDYEFVDNDSDDSDDM
Sbjct: 1   MESEDELDMHDAHDDDDDSVDNEEDFYSGGDDDAAGIDSDDADVGDYEFVDNDSDDSDDM 60

Query: 61  VSYRHQ---IVEREGESDETRENGKEIKLMETKEKKGGDDGFQGRGEKEKKDGDSKMEES 120
           VSYRHQ   I+  E +  +                                         
Sbjct: 61  VSYRHQQNYIILAEADIQQC---------------------------------------- 120

Query: 121 EENGQEEDGRKKHHLLLLFNVVALVSIVHWAKFWPQFVVELVFALFGYDEGAKGVCEDLH 180
               QEED  +   +L +  V A + + ++   W                          
Sbjct: 121 ----QEEDITRVSTVLSISKVAASILLRYYN--W-------------------------- 180

Query: 181 PSGRIEHKVIEASSGEKEKEKVDDPKRLMKTLGEDGIFSGDVRSVSKVHDEWFADEEKVR 240
                                                      SVSKVHDEWFADEEKVR
Sbjct: 181 -------------------------------------------SVSKVHDEWFADEEKVR 231

Query: 241 RSVGLLEKPVLRHSNELELPCGICFEIYSRDKIQSASCGHPFCNACWTGRNLVVVGGEKP 300
           RSVGLL+KPVLRHSNELELPCGICFEIY  DKIQSA+CGHPFCNACWTG           
Sbjct: 241 RSVGLLQKPVLRHSNELELPCGICFEIYPLDKIQSAACGHPFCNACWTG----------- 231

Query: 301 TSNGLRKEIATLSFFIEWQVVEKGAISSPEIMPKGSSLTIADVALSILIDEVFLFHNVIP 360
                                                                       
Sbjct: 301 ------------------------------------------------------------ 231

Query: 361 WASQKSAENANTRCLRKQQSYISTSINDGPGCLMLRCPDPSCGAAVGQDMINLLASDDDK 420
                               YISTSINDGPGCLMLRCPDPSCGAA+ QDMINLL S+DDK
Sbjct: 361 --------------------YISTSINDGPGCLMLRCPDPSCGAAIDQDMINLLVSEDDK 231

Query: 421 KKYFRYFVRSYVEDNRK 434
           KKYFRYFVRSYVEDNRK
Sbjct: 421 KKYFRYFVRSYVEDNRK 231

[Close]

BLAST of HG10006003 vs. ExPASy TrEMBL
Match: A0A6J1CRR9 (RBR-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111014168 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.0e-68
Identity = 187/433 (43.19%), Postives = 205/433 (47.34%), Query Frame = 0


Query: 1   MESEDELDMHDAHDDDDSVDNEEDFYSGGDDDAAAIDSDDADVGDYEFVDNDSDDSDDMV 60
           MESEDELDMHDAHDDDD  DNE+ FYSGGDDDAAAIDSDDADVGDYEF+DNDSDDSDDMV
Sbjct: 1   MESEDELDMHDAHDDDDE-DNEDAFYSGGDDDAAAIDSDDADVGDYEFIDNDSDDSDDMV 60

Query: 61  SYRHQIVEREGESDETRENGKEIKLMETKEKKGGDDGFQGRGEKEKKDGDSKMEESEENG 120
           SYRHQ            +N   +   + +++                             
Sbjct: 61  SYRHQ------------QNYIILAEADIRQR----------------------------- 120

Query: 121 QEEDGRKKHHLLLLFNVVALVSIVHWAKFWPQFVVELVFALFGYDEGAKGVCEDLHPSGR 180
           QEED  +   +L +  V A + + ++   W                              
Sbjct: 121 QEEDIMRVSTVLSISKVAASILLRYYN--W------------------------------ 180

Query: 181 IEHKVIEASSGEKEKEKVDDPKRLMKTLGEDGIFSGDVRSVSKVHDEWFADEEKVRRSVG 240
                                                  SVSKVHDEWFADEEKVRR+VG
Sbjct: 181 ---------------------------------------SVSKVHDEWFADEEKVRRAVG 229

Query: 241 LLEKPVLRHSNELELPCGICFEIYSRDKIQSASCGHPFCNACWTGRNLVVVGGEKPTSNG 300
           LLEKPVL+ SNELELPCGICFEIYSRDKIQSA+CGHPFCN CWTG               
Sbjct: 241 LLEKPVLQSSNELELPCGICFEIYSRDKIQSAACGHPFCNTCWTG--------------- 229

Query: 301 LRKEIATLSFFIEWQVVEKGAISSPEIMPKGSSLTIADVALSILIDEVFLFHNVIPWASQ 360
                                                                       
Sbjct: 301 ------------------------------------------------------------ 229

Query: 361 KSAENANTRCLRKQQSYISTSINDGPGCLMLRCPDPSCGAAVGQDMINLLASDDDKKKYF 420
                           YISTSINDGPGCLMLRCPDPSCGAAVGQDMINLLASDDDKKKYF
Sbjct: 361 ----------------YISTSINDGPGCLMLRCPDPSCGAAVGQDMINLLASDDDKKKYF 229

Query: 421 RYFVRSYVEDNRK 434
           RYFVRSYVEDNRK
Sbjct: 421 RYFVRSYVEDNRK 229

[Close]

BLAST of HG10006003 vs. ExPASy TrEMBL
Match: A0A6J1HPL6 (RBR-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111465486 PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 3.0e-68
Identity = 187/435 (42.99%), Postives = 204/435 (46.90%), Query Frame = 0


Query: 1   MESEDELDMHDAH--DDDDSVDNEEDFYSGGDDDAAAIDSDDADVGDYEFVDNDSDDSDD 60
           MESEDELDMHDAH  DDDDSVDNEEDFYSGG+DDAAAIDSDDADVGDYEFVDNDSDDSDD
Sbjct: 1   MESEDELDMHDAHDDDDDDSVDNEEDFYSGGEDDAAAIDSDDADVGDYEFVDNDSDDSDD 60

Query: 61  MVSYRHQIVEREGESDETRENGKEIKLMETKEKKGGDDGFQGRGEKEKKDGDSKMEESEE 120
           MVSYRHQ            +N   +   + +++                           
Sbjct: 61  MVSYRHQ------------QNYIILAEADIRQR--------------------------- 120

Query: 121 NGQEEDGRKKHHLLLLFNVVALVSIVHWAKFWPQFVVELVFALFGYDEGAKGVCEDLHPS 180
             QEED  +   +L +  V A + + ++   W                            
Sbjct: 121 --QEEDIMRVSTVLSISKVAASILLRYYN--W---------------------------- 180

Query: 181 GRIEHKVIEASSGEKEKEKVDDPKRLMKTLGEDGIFSGDVRSVSKVHDEWFADEEKVRRS 240
                                                    SVSKVHDEWFADEEKVRR+
Sbjct: 181 -----------------------------------------SVSKVHDEWFADEEKVRRA 232

Query: 241 VGLLEKPVLRHSNELELPCGICFEIYSRDKIQSASCGHPFCNACWTGRNLVVVGGEKPTS 300
           VG+LEKPVL HSN LELPCGICFEIYSRD IQSA+CGHPFCN CWTG             
Sbjct: 241 VGILEKPVLPHSNALELPCGICFEIYSRDNIQSAACGHPFCNTCWTG------------- 232

Query: 301 NGLRKEIATLSFFIEWQVVEKGAISSPEIMPKGSSLTIADVALSILIDEVFLFHNVIPWA 360
                                                                       
Sbjct: 301 ------------------------------------------------------------ 232

Query: 361 SQKSAENANTRCLRKQQSYISTSINDGPGCLMLRCPDPSCGAAVGQDMINLLASDDDKKK 420
                             YI TSINDGPGCLMLRCPDPSCGAAVGQDMINLLASDDDKKK
Sbjct: 361 ------------------YIRTSINDGPGCLMLRCPDPSCGAAVGQDMINLLASDDDKKK 232

Query: 421 YFRYFVRSYVEDNRK 434
           Y RYFVRSYVEDNRK
Sbjct: 421 YSRYFVRSYVEDNRK 232

[Close]

BLAST of HG10006003 vs. ExPASy TrEMBL
Match: A0A6J1FIK3 (RBR-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111444256 PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 6.7e-68
Identity = 187/434 (43.09%), Postives = 203/434 (46.77%), Query Frame = 0


Query: 1   MESEDELDMHDAH-DDDDSVDNEEDFYSGGDDDAAAIDSDDADVGDYEFVDNDSDDSDDM 60
           MESEDELDMHDAH DDDDSVDNEEDFYSGG+DDAAAIDSDDADVGDYEFVDNDSDDSDDM
Sbjct: 1   MESEDELDMHDAHDDDDDSVDNEEDFYSGGEDDAAAIDSDDADVGDYEFVDNDSDDSDDM 60

Query: 61  VSYRHQIVEREGESDETRENGKEIKLMETKEKKGGDDGFQGRGEKEKKDGDSKMEESEEN 120
           VSYRHQ            +N   +   + +++                            
Sbjct: 61  VSYRHQ------------QNYIILAEADIRQR---------------------------- 120

Query: 121 GQEEDGRKKHHLLLLFNVVALVSIVHWAKFWPQFVVELVFALFGYDEGAKGVCEDLHPSG 180
            QEED  +   +L +  V A + + H+   W                             
Sbjct: 121 -QEEDIMRVSTVLSISKVAASILLRHYN--W----------------------------- 180

Query: 181 RIEHKVIEASSGEKEKEKVDDPKRLMKTLGEDGIFSGDVRSVSKVHDEWFADEEKVRRSV 240
                                                   SVSKVHDEWFADEEKVRR+V
Sbjct: 181 ----------------------------------------SVSKVHDEWFADEEKVRRAV 231

Query: 241 GLLEKPVLRHSNELELPCGICFEIYSRDKIQSASCGHPFCNACWTGRNLVVVGGEKPTSN 300
           G+LEKPVL  SN LELPCGICFEIYSRD IQSA+CGHPFCN CWTG              
Sbjct: 241 GILEKPVLPPSNALELPCGICFEIYSRDNIQSAACGHPFCNTCWTG-------------- 231

Query: 301 GLRKEIATLSFFIEWQVVEKGAISSPEIMPKGSSLTIADVALSILIDEVFLFHNVIPWAS 360
                                                                       
Sbjct: 301 ------------------------------------------------------------ 231

Query: 361 QKSAENANTRCLRKQQSYISTSINDGPGCLMLRCPDPSCGAAVGQDMINLLASDDDKKKY 420
                            YI TSINDGPGCLMLRCPDPSCGAAVGQDMINLLASDDDKKKY
Sbjct: 361 -----------------YIRTSINDGPGCLMLRCPDPSCGAAVGQDMINLLASDDDKKKY 231

Query: 421 FRYFVRSYVEDNRK 434
            RYFVRSYVEDNRK
Sbjct: 421 SRYFVRSYVEDNRK 231

[Close]

BLAST of HG10006003 vs. TAIR 10
Match: AT1G65430.1 (IBR domain-containing protein )

HSP 1 Score: 164.9 bits (416), Expect = 1.5e-40
Identity = 91/213 (42.72%), Postives = 104/213 (48.83%), Query Frame = 0


Query: 221 VSKVHDEWFADEEKVRRSVGLLEKPVLRHSNELELPCGICFEIYSRDKIQSASCGHPFCN 280
           VS+VHDEWFADEEKVR +VGLLEKPV+    + EL CGICFE +  DK+ +A+CGHPFC+
Sbjct: 92  VSRVHDEWFADEEKVRDAVGLLEKPVVDFPTDGELDCGICFETFLSDKLHAAACGHPFCD 151

Query: 281 ACWTGRNLVVVGGEKPTSNGLRKEIATLSFFIEWQVVEKGAISSPEIMPKGSSLTIADVA 340
           +CW G                                                       
Sbjct: 152 SCWEG------------------------------------------------------- 211

Query: 341 LSILIDEVFLFHNVIPWASQKSAENANTRCLRKQQSYISTSINDGPGCLMLRCPDPSCGA 400
                                               YI+T+INDGPGCL LRCPDPSC A
Sbjct: 212 ------------------------------------YITTAINDGPGCLTLRCPDPSCRA 213

Query: 401 AVGQDMINLLASDDDKKKYFRYFVRSYVEDNRK 434
           AVGQDMINLLA D DK+KY  YFVRSYVEDNRK
Sbjct: 272 AVGQDMINLLAPDKDKQKYTSYFVRSYVEDNRK 213

[Close]

BLAST of HG10006003 vs. TAIR 10
Match: AT1G05890.1 (RING/U-box superfamily protein )

HSP 1 Score: 154.8 bits (390), Expect = 1.6e-37
Identity = 85/214 (39.72%), Postives = 105/214 (49.07%), Query Frame = 0


Query: 220 SVSKVHDEWFADEEKVRRSVGLLEKPVLRHSNELELPCGICFEIYSRDKIQSASCGHPFC 279
           SVSKV+DEWFADEE+VRR+VG+LE PV+   +  E  CGICF+ Y+ ++I S SCGHPFC
Sbjct: 95  SVSKVNDEWFADEERVRRTVGILEGPVVTTPDGREFTCGICFDSYTLEEIVSVSCGHPFC 154

Query: 280 NACWTGRNLVVVGGEKPTSNGLRKEIATLSFFIEWQVVEKGAISSPEIMPKGSSLTIADV 339
             CWTG                                                      
Sbjct: 155 ATCWTG------------------------------------------------------ 214

Query: 340 ALSILIDEVFLFHNVIPWASQKSAENANTRCLRKQQSYISTSINDGPGCLMLRCPDPSCG 399
                                                YIST+INDGPGCLML+CPDPSC 
Sbjct: 215 -------------------------------------YISTTINDGPGCLMLKCPDPSCP 217

Query: 400 AAVGQDMINLLASDDDKKKYFRYFVRSYVEDNRK 434
           AA+G+DMI+ LAS +DK+KY+RYF+RSYVE NR+
Sbjct: 275 AAIGRDMIDKLASKEDKEKYYRYFLRSYVEVNRE 217

[Close]

BLAST of HG10006003 vs. TAIR 10
Match: AT1G05890.2 (RING/U-box superfamily protein )

HSP 1 Score: 154.8 bits (390), Expect = 1.6e-37
Identity = 85/214 (39.72%), Postives = 105/214 (49.07%), Query Frame = 0


Query: 220 SVSKVHDEWFADEEKVRRSVGLLEKPVLRHSNELELPCGICFEIYSRDKIQSASCGHPFC 279
           SVSKV+DEWFADEE+VRR+VG+LE PV+   +  E  CGICF+ Y+ ++I S SCGHPFC
Sbjct: 137 SVSKVNDEWFADEERVRRTVGILEGPVVTTPDGREFTCGICFDSYTLEEIVSVSCGHPFC 196

Query: 280 NACWTGRNLVVVGGEKPTSNGLRKEIATLSFFIEWQVVEKGAISSPEIMPKGSSLTIADV 339
             CWTG                                                      
Sbjct: 197 ATCWTG------------------------------------------------------ 256

Query: 340 ALSILIDEVFLFHNVIPWASQKSAENANTRCLRKQQSYISTSINDGPGCLMLRCPDPSCG 399
                                                YIST+INDGPGCLML+CPDPSC 
Sbjct: 257 -------------------------------------YISTTINDGPGCLMLKCPDPSCP 259

Query: 400 AAVGQDMINLLASDDDKKKYFRYFVRSYVEDNRK 434
           AA+G+DMI+ LAS +DK+KY+RYF+RSYVE NR+
Sbjct: 317 AAIGRDMIDKLASKEDKEKYYRYFLRSYVEVNRE 259

[Close]

BLAST of HG10006003 vs. TAIR 10
Match: AT2G31760.1 (RING/U-box superfamily protein )

HSP 1 Score: 136.7 bits (343), Expect = 4.5e-32
Identity = 73/214 (34.11%), Postives = 98/214 (45.79%), Query Frame = 0


Query: 221 VSKVHDEWFADEEKVRRSVGLLEKPVLR-HSNELELPCGICFEIYSRDKIQSASCGHPFC 280
           VSK+ DEWF DEE++R++VG+L++PV+  +  E+++ CGICFE Y+R +I S SCGHP+C
Sbjct: 84  VSKLEDEWFTDEERIRKTVGILKEPVVDVNGTEVDIQCGICFESYTRKEIASVSCGHPYC 143

Query: 281 NACWTGRNLVVVGGEKPTSNGLRKEIATLSFFIEWQVVEKGAISSPEIMPKGSSLTIADV 340
             CWTG                                                      
Sbjct: 144 KTCWTG------------------------------------------------------ 203

Query: 341 ALSILIDEVFLFHNVIPWASQKSAENANTRCLRKQQSYISTSINDGPGCLMLRCPDPSCG 400
                                                YI+T I DGPGCL ++CP+PSC 
Sbjct: 204 -------------------------------------YITTKIEDGPGCLRVKCPEPSCY 206

Query: 401 AAVGQDMINLLASDDDKKKYFRYFVRSYVEDNRK 434
           A VGQDMI+ +    DK KY+RYF+RSYVED +K
Sbjct: 264 AVVGQDMIDEVTEKKDKDKYYRYFLRSYVEDGKK 206

[Close]

BLAST of HG10006003 vs. TAIR 10
Match: AT2G31780.1 (RING/U-box superfamily protein )

HSP 1 Score: 134.8 bits (338), Expect = 1.7e-31
Identity = 72/214 (33.64%), Postives = 97/214 (45.33%), Query Frame = 0


Query: 221 VSKVHDEWFADEEKVRRSVGLLEKPVLR-HSNELELPCGICFEIYSRDKIQSASCGHPFC 280
           VSK+ DEWF DEE++R++VG+L++PV+  +  E+++ CGICFE Y+R +I   SCGHP+C
Sbjct: 102 VSKLEDEWFTDEERIRKTVGILKEPVVDVNGTEVDIQCGICFESYTRKEIARVSCGHPYC 161

Query: 281 NACWTGRNLVVVGGEKPTSNGLRKEIATLSFFIEWQVVEKGAISSPEIMPKGSSLTIADV 340
             CWTG                                                      
Sbjct: 162 KTCWTG------------------------------------------------------ 221

Query: 341 ALSILIDEVFLFHNVIPWASQKSAENANTRCLRKQQSYISTSINDGPGCLMLRCPDPSCG 400
                                                YI+T I DGPGCL ++CP+PSC 
Sbjct: 222 -------------------------------------YITTKIEDGPGCLRVKCPEPSCY 224

Query: 401 AAVGQDMINLLASDDDKKKYFRYFVRSYVEDNRK 434
           A VGQDMI+ +    DK KY+RYF+RSYVED +K
Sbjct: 282 AVVGQDMIDEVTEKKDKDKYYRYFLRSYVEDGKK 224

The following BLAST results are available for this feature:

BLAST of HG10006003 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890077.1	7.1e-72	44.70	probable E3 ubiquitin-protein ligase ARI8 isoform X1 [Benincasa hispida]	[more]
XP_031736775.1	3.9e-70	43.71	probable E3 ubiquitin-protein ligase ARI8 isoform X4 [Cucumis sativus]	[more]
XP_031736774.1	3.9e-70	43.71	probable E3 ubiquitin-protein ligase ARI8 isoform X3 [Cucumis sativus]	[more]
XP_004138892.1	3.9e-70	43.71	probable E3 ubiquitin-protein ligase ARI8 isoform X2 [Cucumis sativus]	[more]
XP_031736773.1	3.9e-70	43.71	probable E3 ubiquitin-protein ligase ARI8 isoform X1 [Cucumis sativus]	[more]

BLAST of HG10006003 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W468	2.2e-39	42.72	Probable E3 ubiquitin-protein ligase ARI8 OS=Arabidopsis thaliana OX=3702 GN=ARI...	[more]
Q8L829	2.2e-36	39.72	Probable E3 ubiquitin-protein ligase ARI5 OS=Arabidopsis thaliana OX=3702 GN=ARI...	[more]
P0C8K8	2.2e-31	37.38	Putative E3 ubiquitin-protein ligase ARI6 OS=Arabidopsis thaliana OX=3702 GN=ARI...	[more]
Q9SKC4	6.3e-31	34.11	Probable E3 ubiquitin-protein ligase ARI10 OS=Arabidopsis thaliana OX=3702 GN=AR...	[more]
Q9SKC2	2.4e-30	33.64	Probable E3 ubiquitin-protein ligase ARI11 OS=Arabidopsis thaliana OX=3702 GN=AR...	[more]

BLAST of HG10006003 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B4Y9	1.6e-69	43.25	RBR-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103485827 PE=3 S...	[more]
A0A1S3B4U8	1.6e-69	43.25	RBR-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103485827 PE=3 S...	[more]
A0A6J1CRR9	1.0e-68	43.19	RBR-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111014168...	[more]
A0A6J1HPL6	3.0e-68	42.99	RBR-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111465486 PE...	[more]
A0A6J1FIK3	6.7e-68	43.09	RBR-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111444256 ...	[more]

BLAST of HG10006003 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65430.1	1.5e-40	42.72	IBR domain-containing protein	[more]
AT1G05890.1	1.6e-37	39.72	RING/U-box superfamily protein	[more]
AT1G05890.2	1.6e-37	39.72	RING/U-box superfamily protein	[more]
AT2G31760.1	4.5e-32	34.11	RING/U-box superfamily protein	[more]
AT2G31780.1	1.7e-31	33.64	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 242..298 e-value: 2.1E-5 score: 25.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..125
None	No IPR available	PANTHER	PTHR11685:SF296	RBR-TYPE E3 UBIQUITIN TRANSFERASE	coord: 362..445 coord: 220..285
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 375..429
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 254..286
IPR031127	E3 ubiquitin ligase RBR family	PANTHER	PTHR11685	RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING	coord: 362..445 coord: 220..285

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006003.1	HG10006003.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0004842	ubiquitin-protein transferase activity