HG10005984 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005984
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Mitotic-spindle organizing protein 1
Location	Chr07: 10604866 .. 10605078 (-)
RNA-Seq Expression	HG10005984
Synteny	HG10005984

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCAGAGGCTGCACGAACCGCTCGAGAATCACTAGACCTTGCATTTCATATGTCTAACGTACTTGATGCTGGGATCGACCGCCACACCCTCTCTGTCCTCATTGCTCTTTGTGACATGGGTGTGAACCCTGAAGCACTGGCTGCTGTTGTCAAGGAACTACGCCGGGAGCCACCCTCATCGACCGTCGTCTCCAGTAACAAGTCATAA

mRNA sequence

ATGGATCCAGAGGCTGCACGAACCGCTCGAGAATCACTAGACCTTGCATTTCATATGTCTAACGTACTTGATGCTGGGATCGACCGCCACACCCTCTCTGTCCTCATTGCTCTTTGTGACATGGGTGTGAACCCTGAAGCACTGGCTGCTGTTGTCAAGGAACTACGCCGGGAGCCACCCTCATCGACCGTCGTCTCCAGTAACAAGTCATAA

Coding sequence (CDS)

ATGGATCCAGAGGCTGCACGAACCGCTCGAGAATCACTAGACCTTGCATTTCATATGTCTAACGTACTTGATGCTGGGATCGACCGCCACACCCTCTCTGTCCTCATTGCTCTTTGTGACATGGGTGTGAACCCTGAAGCACTGGCTGCTGTTGTCAAGGAACTACGCCGGGAGCCACCCTCATCGACCGTCGTCTCCAGTAACAAGTCATAA

Protein sequence

MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRREPPSSTVVSSNKS

Homology

[Close]

BLAST of HG10005984 vs. NCBI nr
Match: XP_038889535.1 (mitotic-spindle organizing protein 1B [Benincasa hispida] >XP_038889536.1 mitotic-spindle organizing protein 1B [Benincasa hispida])

HSP 1 Score: 129.8 bits (325), Expect = 9.2e-27
Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRREPP 60
          MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRREPP
Sbjct: 1  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRREPP 60

Query: 61 SS-TVVSSNK 70
          SS TVVSSNK
Sbjct: 61 SSETVVSSNK 70

[Close]

BLAST of HG10005984 vs. NCBI nr
Match: XP_011649034.1 (mitotic-spindle organizing protein 1A [Cucumis sativus])

HSP 1 Score: 127.9 bits (320), Expect = 3.5e-26
Identity = 68/71 (95.77%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 1  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRREPP 60
          MD EAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRREPP
Sbjct: 1  MDQEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRREPP 60

Query: 61 SS-TVVSSNKS 71
          SS T+VSSNKS
Sbjct: 61 SSDTIVSSNKS 71

[Close]

BLAST of HG10005984 vs. NCBI nr
Match: XP_022973921.1 (mitotic-spindle organizing protein 1B-like [Cucurbita maxima] >XP_022973922.1 mitotic-spindle organizing protein 1B-like [Cucurbita maxima])

HSP 1 Score: 125.6 bits (314), Expect = 1.7e-25
Identity = 66/71 (92.96%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 1  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRREPP 60
          MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKEL REPP
Sbjct: 1  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELSREPP 60

Query: 61 SS-TVVSSNKS 71
          SS T+ S NKS
Sbjct: 61 SSETITSGNKS 71

[Close]

BLAST of HG10005984 vs. NCBI nr
Match: KAG6598967.1 (ALBINO3-like protein 3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 124.8 bits (312), Expect = 3.0e-25
Identity = 65/71 (91.55%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 1   MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRREPP 60
           MDPEAARTARESLDLAFHM NVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKEL REPP
Sbjct: 163 MDPEAARTARESLDLAFHMCNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELSREPP 222

Query: 61  SS-TVVSSNKS 71
           SS T++S NKS
Sbjct: 223 SSETIISGNKS 233

[Close]

BLAST of HG10005984 vs. NCBI nr
Match: XP_008441751.1 (PREDICTED: mitotic-spindle organizing protein 1A-like [Cucumis melo] >XP_008441752.1 PREDICTED: mitotic-spindle organizing protein 1A-like [Cucumis melo] >XP_008441753.1 PREDICTED: mitotic-spindle organizing protein 1A-like [Cucumis melo] >XP_008441755.1 PREDICTED: mitotic-spindle organizing protein 1A-like [Cucumis melo] >XP_008441756.1 PREDICTED: mitotic-spindle organizing protein 1A-like [Cucumis melo] >XP_008441757.1 PREDICTED: mitotic-spindle organizing protein 1A-like [Cucumis melo])

HSP 1 Score: 124.4 bits (311), Expect = 3.9e-25
Identity = 67/71 (94.37%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 1  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRREPP 60
          MD EAARTARESLDLAFHMSNVLD+GIDRHTLSVLIALCDMGVNPEALAAVVKELRREPP
Sbjct: 1  MDQEAARTARESLDLAFHMSNVLDSGIDRHTLSVLIALCDMGVNPEALAAVVKELRREPP 60

Query: 61 SS-TVVSSNKS 71
          SS T VSSNKS
Sbjct: 61 SSETNVSSNKS 71

[Close]

BLAST of HG10005984 vs. ExPASy Swiss-Prot
Match: Q9M0N8 (Mitotic-spindle organizing protein 1B OS=Arabidopsis thaliana OX=3702 GN=GIP1 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 2.3e-20
Identity = 52/69 (75.36%), Postives = 57/69 (82.61%), Query Frame = 0


Query: 1  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRE-- 60
          MD EA+RTARESL+L F MSN+LD G+DRHTLSVLIALCD+GVNPEALA VVKELRRE  
Sbjct: 1  MDEEASRTARESLELVFRMSNILDTGLDRHTLSVLIALCDLGVNPEALATVVKELRRESI 60

Query: 61 PPSSTVVSS 68
          P S T   S
Sbjct: 61 PDSVTTTPS 69

[Close]

BLAST of HG10005984 vs. ExPASy Swiss-Prot
Match: Q9C9T3 (Mitotic-spindle organizing protein 1A OS=Arabidopsis thaliana OX=3702 GN=GIP2 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 2.8e-18
Identity = 44/63 (69.84%), Postives = 55/63 (87.30%), Query Frame = 0


Query: 1  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRREPP 60
          M+ EAA TARESL+L F MSN+L+ G+DRHTLSVLIALCD+G+NPEALA +VKELRR+  
Sbjct: 1  MNQEAAETARESLELVFRMSNILETGLDRHTLSVLIALCDIGLNPEALATLVKELRRDSA 60

Query: 61 SST 64
          ++T
Sbjct: 61 TTT 63

[Close]

BLAST of HG10005984 vs. ExPASy Swiss-Prot
Match: A9NKD9 (Mitotic-spindle organizing protein 1 OS=Picea sitchensis OX=3332 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.8e-17
Identity = 45/58 (77.59%), Postives = 50/58 (86.21%), Query Frame = 0


Query: 1  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRE 59
          MD  AA+ ARESLDLAF +SN L  G+DRHTLS+LIALC+ GVNPEALAAVVKELRRE
Sbjct: 1  MDRTAAQNARESLDLAFSISNFLQTGLDRHTLSILIALCEHGVNPEALAAVVKELRRE 58

[Close]

BLAST of HG10005984 vs. ExPASy Swiss-Prot
Match: B5FXZ4 (Mitotic-spindle organizing protein 1 OS=Taeniopygia guttata OX=59729 GN=mzt1 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 5.3e-09
Identity = 24/48 (50.00%), Postives = 39/48 (81.25%), Query Frame = 0


Query: 10 RESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRR 58
          RE++D+ F +S +L+ G+D  TLS+ + LC+ G+NPEAL++V+KELR+
Sbjct: 12 RETMDVLFEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRK 59

[Close]

BLAST of HG10005984 vs. ExPASy Swiss-Prot
Match: Q8BUR9 (Mitotic-spindle organizing protein 1 OS=Mus musculus OX=10090 GN=Mzt1 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.0e-08
Identity = 27/60 (45.00%), Postives = 43/60 (71.67%), Query Frame = 0


Query: 3  PEAARTA-----RESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRR 58
          P AA +A     RE++D+   +S +L+ G+D  TLS+ + LC+ G+NPEAL++V+KELR+
Sbjct: 7  PGAAASANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRK 66

[Close]

BLAST of HG10005984 vs. ExPASy TrEMBL
Match: A0A0A0LMZ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G094370 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.7e-26
Identity = 68/71 (95.77%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 1  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRREPP 60
          MD EAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRREPP
Sbjct: 1  MDQEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRREPP 60

Query: 61 SS-TVVSSNKS 71
          SS T+VSSNKS
Sbjct: 61 SSDTIVSSNKS 71

[Close]

BLAST of HG10005984 vs. ExPASy TrEMBL
Match: A0A6J1I8U7 (mitotic-spindle organizing protein 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111472550 PE=3 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 8.4e-26
Identity = 66/71 (92.96%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 1  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRREPP 60
          MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKEL REPP
Sbjct: 1  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELSREPP 60

Query: 61 SS-TVVSSNKS 71
          SS T+ S NKS
Sbjct: 61 SSETITSGNKS 71

[Close]

BLAST of HG10005984 vs. ExPASy TrEMBL
Match: A0A1S3B468 (mitotic-spindle organizing protein 1A-like OS=Cucumis melo OX=3656 GN=LOC103485818 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.9e-25
Identity = 67/71 (94.37%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 1  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRREPP 60
          MD EAARTARESLDLAFHMSNVLD+GIDRHTLSVLIALCDMGVNPEALAAVVKELRREPP
Sbjct: 1  MDQEAARTARESLDLAFHMSNVLDSGIDRHTLSVLIALCDMGVNPEALAAVVKELRREPP 60

Query: 61 SS-TVVSSNKS 71
          SS T VSSNKS
Sbjct: 61 SSETNVSSNKS 71

[Close]

BLAST of HG10005984 vs. ExPASy TrEMBL
Match: A0A7J8QTM5 (Uncharacterized protein OS=Gossypium davidsonii OX=34287 GN=Godav_017553 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.7e-24
Identity = 58/70 (82.86%), Postives = 67/70 (95.71%), Query Frame = 0


Query: 1  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRREPP 60
          MDPEAARTARESLDLAFHMSN+LD G+DRHTLSVL+ALCD+G+NPEALAAVVKEL+REPP
Sbjct: 1  MDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLVALCDLGLNPEALAAVVKELQREPP 60

Query: 61 SSTVVSSNKS 71
          +ST +SS+ S
Sbjct: 61 TSTPLSSSSS 70

[Close]

BLAST of HG10005984 vs. ExPASy TrEMBL
Match: A0A7J9LW57 (Uncharacterized protein (Fragment) OS=Gossypium schwendimanii OX=34291 GN=Goshw_013297 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.5e-24
Identity = 59/70 (84.29%), Postives = 66/70 (94.29%), Query Frame = 0


Query: 1  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRREPP 60
          MDPEAARTARESLDLAFHMSN+LD G+DRHTLSVLIALCD+G+NPEALAAVVKEL+REPP
Sbjct: 1  MDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGLNPEALAAVVKELQREPP 60

Query: 61 SSTVVSSNKS 71
           ST +SS+ S
Sbjct: 61 PSTPLSSSSS 70

[Close]

BLAST of HG10005984 vs. TAIR 10
Match: AT4G09550.1 (AtGCP3 interacting protein 1 )

HSP 1 Score: 99.0 bits (245), Expect = 1.6e-21
Identity = 52/69 (75.36%), Postives = 57/69 (82.61%), Query Frame = 0


Query: 1  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRRE-- 60
          MD EA+RTARESL+L F MSN+LD G+DRHTLSVLIALCD+GVNPEALA VVKELRRE  
Sbjct: 1  MDEEASRTARESLELVFRMSNILDTGLDRHTLSVLIALCDLGVNPEALATVVKELRRESI 60

Query: 61 PPSSTVVSS 68
          P S T   S
Sbjct: 61 PDSVTTTPS 69

[Close]

BLAST of HG10005984 vs. TAIR 10
Match: AT1G73790.1 (Protein of unknown function (DUF3743) )

HSP 1 Score: 92.0 bits (227), Expect = 2.0e-19
Identity = 44/63 (69.84%), Postives = 55/63 (87.30%), Query Frame = 0


Query: 1  MDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRREPP 60
          M+ EAA TARESL+L F MSN+L+ G+DRHTLSVLIALCD+G+NPEALA +VKELRR+  
Sbjct: 1  MNQEAAETARESLELVFRMSNILETGLDRHTLSVLIALCDIGLNPEALATLVKELRRDSA 60

Query: 61 SST 64
          ++T
Sbjct: 61 TTT 63

The following BLAST results are available for this feature:

BLAST of HG10005984 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889535.1	9.2e-27	98.57	mitotic-spindle organizing protein 1B [Benincasa hispida] >XP_038889536.1 mitoti...	[more]
XP_011649034.1	3.5e-26	95.77	mitotic-spindle organizing protein 1A [Cucumis sativus]	[more]
XP_022973921.1	1.7e-25	92.96	mitotic-spindle organizing protein 1B-like [Cucurbita maxima] >XP_022973922.1 mi...	[more]
KAG6598967.1	3.0e-25	91.55	ALBINO3-like protein 3, mitochondrial, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_008441751.1	3.9e-25	94.37	PREDICTED: mitotic-spindle organizing protein 1A-like [Cucumis melo] >XP_0084417...	[more]

BLAST of HG10005984 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M0N8	2.3e-20	75.36	Mitotic-spindle organizing protein 1B OS=Arabidopsis thaliana OX=3702 GN=GIP1 PE...	[more]
Q9C9T3	2.8e-18	69.84	Mitotic-spindle organizing protein 1A OS=Arabidopsis thaliana OX=3702 GN=GIP2 PE...	[more]
A9NKD9	1.8e-17	77.59	Mitotic-spindle organizing protein 1 OS=Picea sitchensis OX=3332 PE=3 SV=1	[more]
B5FXZ4	5.3e-09	50.00	Mitotic-spindle organizing protein 1 OS=Taeniopygia guttata OX=59729 GN=mzt1 PE=...	[more]
Q8BUR9	2.0e-08	45.00	Mitotic-spindle organizing protein 1 OS=Mus musculus OX=10090 GN=Mzt1 PE=1 SV=1	[more]

BLAST of HG10005984 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMZ6	1.7e-26	95.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G094370 PE=3 SV=1	[more]
A0A6J1I8U7	8.4e-26	92.96	mitotic-spindle organizing protein 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A1S3B468	1.9e-25	94.37	mitotic-spindle organizing protein 1A-like OS=Cucumis melo OX=3656 GN=LOC1034858...	[more]
A0A7J8QTM5	2.7e-24	82.86	Uncharacterized protein OS=Gossypium davidsonii OX=34287 GN=Godav_017553 PE=3 SV...	[more]
A0A7J9LW57	3.5e-24	84.29	Uncharacterized protein (Fragment) OS=Gossypium schwendimanii OX=34291 GN=Goshw_...	[more]

BLAST of HG10005984 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G09550.1	1.6e-21	75.36	AtGCP3 interacting protein 1	[more]
AT1G73790.1	2.0e-19	69.84	Protein of unknown function (DUF3743)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022214	Mitotic-spindle organizing protein 1	PFAM	PF12554	MOZART1	coord: 10..56 e-value: 2.0E-20 score: 72.3
IPR022214	Mitotic-spindle organizing protein 1	PANTHER	PTHR28520	MITOTIC-SPINDLE ORGANIZING PROTEIN 1	coord: 1..67
None	No IPR available	PANTHER	PTHR28520:SF10	MITOTIC-SPINDLE ORGANIZING PROTEIN 1A-LIKE	coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005984.1	HG10005984.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0033566	gamma-tubulin complex localization
biological_process	GO:0051415	microtubule nucleation by interphase microtubule organizing center
biological_process	GO:0090307	mitotic spindle assembly
cellular_component	GO:0000931	gamma-tubulin large complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031021	interphase microtubule organizing center
cellular_component	GO:0005819	spindle