
HG10005969 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCTTACCAAGCTTCATGATCAAGTCGAGGAAGGAGTGAGAGACAAACTATGTGGGCAAGTCATGTCCATTGGCTCATTATGGTATGTCATGGTTGAATTAATGCTTCAAACAACATTACATGACCCTCAAGAGACACGTTCACTTGATCTGACTTGGATCAGATGACCTTTTGAAGGCACAATTTGCTAAGCCATGTTGATAGGCTTCCCCCTATTTTGAAGGTGTTTGTAAGAGAGCAATTGAGGCTAGAGAGTGAGGCATGGTGTGGGGTCATCTGTGGGTTCAAGTTTTGTTTTGTTTGTGTTTTTTTTTTTTTTTTGTTTTGTTTTGTTTTTGTTTCTTTTTAGAAATGAAAACTTTCATTGGGATAAAAATGAAAGAATACAAGACCATACAAAAAACTACACACACAAAAGAAAGAAGGATCCCTCTAAAGGAAAGGACTCCAACTATACAAAATAGAACCTATAGAATAGTTACAAAAGATTTTCGAAAGCAAAGCCTAAAGAGATACATGATATCTAATAAGGGACCAAACATCAAAAGAAGCCCTCTCTGACCCCCGAAACATCTTGTTATTTTGTTCCCCCCATAGGACCCAAAGAGTAGCACACACCCGACCATCCATAAAAAACACCTCTTCTCCCGAAAAGGTAGATGGAGGAGGAACTCCCCAATCATATCATTAGTAACCCTATGACGAGCATCCAAGAATCCAAATGTTTGAAAGAAATAATCCCACACTATGCTTGTGAACTCACAACACTAAAGAAAATGATCCAAGTCTTCCTCCCACACCGTGGGTTCAAGTTAGGTAGGATGGGTATTTTAGGAAGTCTTTTGATTGTATATAGTCGAATGTAGTGTAGGGATATCTTTTTGGCTAGTTAATTGAGAAAGGAGTGCGGAGAAGTAGGCAACTCTCATATTCTCCCCTTGCCCTTGTAAACTCTCTCTGGTTATCAAGAACAAAAGTGGTTTCTATCACGTCTTACTGAGTAATCATTTGTCTTGGATCGTGCATAAAAAATATTGCCTATCATAGATAGCCTCCTCAGCTTGGGCTTGGTGTTTTTCTTGGCCTCGTTGAAGACACAACTCCACCACAGTTTATTATTTTTTATGACGACTTAAGACAGCATCTCCCAATAAGGAATATTTATCAGTCATTTATGTTTTTTGTTTTGTACGGTGTATAAACATTTGAATCTCATATATTTGTAAAGTATTTTGCAAAGTCCATATTAACAAACTGTTTTCTAACTTGCTTGGCGAACAAACAGAAATTACTTCGCAACCTATGCAGAAACTTGTTTTTCAAGTTTTGGTGATAGAGTAAAGAACTGGATTACAATTAATGAGCCTCTTCAAACTTCCGTGAATGGACATGGAATTGGTATCTTTGCTCCTGGAAGATGGGAAAATCCATCAGTTGAACAATATTTGACTGCACACCACCAGATCTTGGCACATTCAACTGCTGTATCCATTTATCGAAAGAAGTATAAGGTATAA ATGCTTCTTACCAAGCTTCATGATCAAGTCGAGGAAGGAGTGAGAGACAAACTATGTGGGCAAGTCATGTCCATTGGCTCATTATGTTTTGGTGATAGAGTAAAGAACTGGATTACAATTAATGAGCCTCTTCAAACTTCCGTGAATGGACATGGAATTGGTATCTTTGCTCCTGGAAGATGGGAAAATCCATCAGTTGAACAATATTTGACTGCACACCACCAGATCTTGGCACATTCAACTGCTGTATCCATTTATCGAAAGAAGTATAAGGTATAA ATGCTTCTTACCAAGCTTCATGATCAAGTCGAGGAAGGAGTGAGAGACAAACTATGTGGGCAAGTCATGTCCATTGGCTCATTATGTTTTGGTGATAGAGTAAAGAACTGGATTACAATTAATGAGCCTCTTCAAACTTCCGTGAATGGACATGGAATTGGTATCTTTGCTCCTGGAAGATGGGAAAATCCATCAGTTGAACAATATTTGACTGCACACCACCAGATCTTGGCACATTCAACTGCTGTATCCATTTATCGAAAGAAGTATAAGGTATAA MLLTKLHDQVEEGVRDKLCGQVMSIGSLCFGDRVKNWITINEPLQTSVNGHGIGIFAPGRWENPSVEQYLTAHHQILAHSTAVSIYRKKYKV Homology
BLAST of HG10005969 vs. NCBI nr
Match: XP_004138903.1 (beta-glucosidase 42 [Cucumis sativus] >KGN61355.1 hypothetical protein Csa_006425 [Cucumis sativus]) HSP 1 Score: 137.1 bits (344), Expect = 7.6e-29 Identity = 64/89 (71.91%), Postives = 71/89 (79.78%), Query Frame = 0
BLAST of HG10005969 vs. NCBI nr
Match: XP_008441738.1 (PREDICTED: beta-glucosidase 42 isoform X2 [Cucumis melo]) HSP 1 Score: 135.6 bits (340), Expect = 2.2e-28 Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0
BLAST of HG10005969 vs. NCBI nr
Match: KAA0051438.1 (beta-glucosidase 42 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 135.6 bits (340), Expect = 2.2e-28 Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0
BLAST of HG10005969 vs. NCBI nr
Match: XP_016899504.1 (PREDICTED: beta-glucosidase 42 isoform X1 [Cucumis melo]) HSP 1 Score: 135.6 bits (340), Expect = 2.2e-28 Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0
BLAST of HG10005969 vs. NCBI nr
Match: XP_038891025.1 (beta-glucosidase 42 [Benincasa hispida]) HSP 1 Score: 131.7 bits (330), Expect = 3.2e-27 Identity = 60/62 (96.77%), Postives = 60/62 (96.77%), Query Frame = 0
BLAST of HG10005969 vs. ExPASy Swiss-Prot
Match: Q9FIW4 (Beta-glucosidase 42 OS=Arabidopsis thaliana OX=3702 GN=BGLU42 PE=2 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 7.6e-24 Identity = 49/62 (79.03%), Postives = 55/62 (88.71%), Query Frame = 0
BLAST of HG10005969 vs. ExPASy Swiss-Prot
Match: Q5N863 (Beta-glucosidase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU4 PE=2 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 2.5e-19 Identity = 42/62 (67.74%), Postives = 51/62 (82.26%), Query Frame = 0
BLAST of HG10005969 vs. ExPASy Swiss-Prot
Match: Q9FZE0 (Beta-glucosidase 40 OS=Arabidopsis thaliana OX=3702 GN=BGLU40 PE=2 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 2.7e-13 Identity = 38/99 (38.38%), Postives = 53/99 (53.54%), Query Frame = 0
BLAST of HG10005969 vs. ExPASy Swiss-Prot
Match: Q8L7J2 (Beta-glucosidase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU6 PE=1 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 3.5e-13 Identity = 36/72 (50.00%), Postives = 44/72 (61.11%), Query Frame = 0
BLAST of HG10005969 vs. ExPASy Swiss-Prot
Match: P37702 (Myrosinase 1 OS=Arabidopsis thaliana OX=3702 GN=TGG1 PE=1 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 4.6e-13 Identity = 39/99 (39.39%), Postives = 50/99 (50.51%), Query Frame = 0
BLAST of HG10005969 vs. ExPASy TrEMBL
Match: A0A0A0LHE2 (Beta-glucosidase OS=Cucumis sativus OX=3659 GN=Csa_2G095930 PE=3 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 3.7e-29 Identity = 64/89 (71.91%), Postives = 71/89 (79.78%), Query Frame = 0
BLAST of HG10005969 vs. ExPASy TrEMBL
Match: A0A5A7U840 (Beta-glucosidase 42 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G001910 PE=3 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 1.1e-28 Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0
BLAST of HG10005969 vs. ExPASy TrEMBL
Match: A0A1S4DU36 (Beta-glucosidase OS=Cucumis melo OX=3656 GN=LOC103485810 PE=3 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 1.1e-28 Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0
BLAST of HG10005969 vs. ExPASy TrEMBL
Match: A0A1S3B454 (Beta-glucosidase OS=Cucumis melo OX=3656 GN=LOC103485810 PE=3 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 1.1e-28 Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0
BLAST of HG10005969 vs. ExPASy TrEMBL
Match: A0A6J1KHT3 (Beta-glucosidase OS=Cucurbita maxima OX=3661 GN=LOC111493363 PE=3 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 1.0e-26 Identity = 59/62 (95.16%), Postives = 61/62 (98.39%), Query Frame = 0
BLAST of HG10005969 vs. TAIR 10
Match: AT5G36890.1 (beta glucosidase 42 ) HSP 1 Score: 110.9 bits (276), Expect = 5.4e-25 Identity = 49/62 (79.03%), Postives = 55/62 (88.71%), Query Frame = 0
BLAST of HG10005969 vs. TAIR 10
Match: AT5G36890.2 (beta glucosidase 42 ) HSP 1 Score: 110.9 bits (276), Expect = 5.4e-25 Identity = 49/62 (79.03%), Postives = 55/62 (88.71%), Query Frame = 0
BLAST of HG10005969 vs. TAIR 10
Match: AT1G26560.1 (beta glucosidase 40 ) HSP 1 Score: 75.9 bits (185), Expect = 1.9e-14 Identity = 38/99 (38.38%), Postives = 53/99 (53.54%), Query Frame = 0
BLAST of HG10005969 vs. TAIR 10
Match: AT5G26000.2 (thioglucoside glucohydrolase 1 ) HSP 1 Score: 75.1 bits (183), Expect = 3.3e-14 Identity = 39/99 (39.39%), Postives = 50/99 (50.51%), Query Frame = 0
BLAST of HG10005969 vs. TAIR 10
Match: AT5G26000.1 (thioglucoside glucohydrolase 1 ) HSP 1 Score: 75.1 bits (183), Expect = 3.3e-14 Identity = 39/99 (39.39%), Postives = 50/99 (50.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|