HG10005965 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10005965
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr07: 10111457 .. 10111840 (-)
RNA-Seq ExpressionHG10005965
SyntenyHG10005965
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTCCGAGGCGAGGAGGTCACCCACTACACCACAAGACCCGAATTCGAGGTCACCCACCCTACCAATAGATCTGGATTCTAGGAGGTCACCCACTTTACCCCTAGATTCGAGTTATAGGAGGTCACCCACCCCACCTTGCAATCTGGATTCCAGGAGATCACTCATTCCACCTTGCGATTTGGAGACTAGAAGATCACCCACCCCACCACCACTTCTACTTTCGTCTCCACCCCAGTTTATTGAGGCTAGGAGGTCACCCCCACCCCTACATCCACTTCTGTCTCCACCTCGATCTATTGAGCCTAGGAGGTCATCTCCCTCACCCCCACCTCCACTTTCGTCTCCACTCCCATCTACTGCTATAGAGCTTCTGTTGTAG

mRNA sequence

ATGGTGTCCGAGGCGAGGAGGTCACCCACTACACCACAAGACCCGAATTCGAGGTCACCCACCCTACCAATAGATCTGGATTCTAGGAGGTCACCCACTTTACCCCTAGATTCGAGTTATAGGAGGTCACCCACCCCACCTTGCAATCTGGATTCCAGGAGATCACTCATTCCACCTTGCGATTTGGAGACTAGAAGATCACCCACCCCACCACCACTTCTACTTTCGTCTCCACCCCAGTTTATTGAGGCTAGGAGGTCACCCCCACCCCTACATCCACTTCTGTCTCCACCTCGATCTATTGAGCCTAGGAGGTCATCTCCCTCACCCCCACCTCCACTTTCGTCTCCACTCCCATCTACTGCTATAGAGCTTCTGTTGTAG

Coding sequence (CDS)

ATGGTGTCCGAGGCGAGGAGGTCACCCACTACACCACAAGACCCGAATTCGAGGTCACCCACCCTACCAATAGATCTGGATTCTAGGAGGTCACCCACTTTACCCCTAGATTCGAGTTATAGGAGGTCACCCACCCCACCTTGCAATCTGGATTCCAGGAGATCACTCATTCCACCTTGCGATTTGGAGACTAGAAGATCACCCACCCCACCACCACTTCTACTTTCGTCTCCACCCCAGTTTATTGAGGCTAGGAGGTCACCCCCACCCCTACATCCACTTCTGTCTCCACCTCGATCTATTGAGCCTAGGAGGTCATCTCCCTCACCCCCACCTCCACTTTCGTCTCCACTCCCATCTACTGCTATAGAGCTTCTGTTGTAG

Protein sequence

MVSEARRSPTTPQDPNSRSPTLPIDLDSRRSPTLPLDSSYRRSPTPPCNLDSRRSLIPPCDLETRRSPTPPPLLLSSPPQFIEARRSPPPLHPLLSPPRSIEPRRSSPSPPPPLSSPLPSTAIELLL
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..118

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10005965.1HG10005965.1mRNA