HG10005947 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGAGACTTTCTGTGCTGCCGATCGTCGCTGGTCATCTATTTCTTGCATTGTTCACCATCGCTTCAGCTCAGGATTCCCATCTCGGATCCGCTCGTGTAGTATTTCAGGTTCTTCATTGCCTTCTCTTTTAATCAAATTTGAATCCATGTAGAACTTCACGAGATAGTGTTAAGTGTTCGCTAACAGATCGAACTGCATTTTCGATTACCCAGACGAATTATGGAGATATCGAATTCGGTTTCTTCCCCAACGTAGCACCCAAAACCGTTGACCACATTTTCAAACTTGTTCGTCTCGGATGCTATAACACCAATCACTTCTTTCGGGTATTACAACTGCAGATCTTTTCTTTTTGTATGTTTCTGTGATTATGTGGGGAAAATTGTGCGTGAGATAAGTTCACATTGTCAGGTTGATAAAGGGTTTGTGGCGCAAGTGGCAGATGTAGTGGGGGGAAGATTAGCTCCCATGAACGAGGAACAAAGAGCGGAAGCTGAGAAGACTGTTGTTGGTGAATTTAGTGATGTTAAACACGTTAGAGGAATTCTTTCTATGGGGAGGTTAGTTCTTTATACACTACTCGCAAAGTTACTACTGCTTTCTTTTTTCTAGGACAATGGTCAGTAACTCATGTCCTGTCTATAATGTGTGATGTTAGGTCTGAATATTCTCAAAATCTTAGATGTTTTCCATATTTGAATGGAAACTCCCTTGCATTTGTAGATATGGAAGAAATGTAAAGTGCGCAGGCAGAATCTGTTCTGTTCGCATGTTACATGGTTGCTTATCCTGGGAGGTTAAACTGATTCTTTATGCTTCCGGTAAAAGGCCGTAGAATTGAGTAAGAATGTCATGAGTTCACAAGCTGTTGGTGCCACCCATTTCTCTCTAGTTCTAACCCCCTGCCTATTTTTTCTGACAGCTTTGTGTTTGGAAATTGACAAAAATGTCTAAATTTGAAGGAGTTAATAGGTTTTTAGCCCACTATTAATTAAAAATAATGGTGCGTTGATGTCACTTTTAACATTTAGGCCTTGATGATAACTTATTTGGTTTTTGGAAACTAAGCTTGTAAACACTAGTGCCACCTACCAATCCAACTTTGGTGCCAAAAGACTGATTCTAGATGTTTCTCGAGTTGCAAATGAACTAATTGATGAATGAAAAAGGAAATAAAGAGAAAGGGATGCTTATAAAGTTTGATATTGAGAAGGCTTTTGACATGGTTGTTTGAAATCTCTTAAATGATATTCTTTGAGCCATAAGCTTTGGAATCAAATGGTGAAGATGGACAAGGAGTGTATCTTGACAACAAATTTCTCTACTATCATTAATGGCAAGCCCCAAGGTTGTTTCATGCCACTAGGGGACTGAGACAAGGAGATTTCTTATCTCCCCTTCTTTTCATTATGGTGTTTGATTGATTAAGGAGGGTGCTTACTCTTGCTGAACCAGGAGGGTTGATCAATGGCTTCAAAGTATGTGAGGAACCCAATGAAACCCCCATCACTCATTTACAATTCGCCGATGATACTATTCTTTTCTCCACACACCATTGGCAACCTTGTTAGAATTAATAGACACTTTGAAGAAGTATCAGGCCTCAATATAAATTGCCAAACATCTGAATTTTTGGGCAACGGAATTAATTCACAGTTGCTGTCCCATCTTGCAAATTTGTTTAATTGTAAATTGGGAGTTTGGTCATGTGCTTATTTGGTTGCCTCTTAATGGAAAGCTAAACACATCATCTTTTTAGGAACCAGTTATTGAGAAAGTTGAAAAATGGCTCTTTATTCCTTGGGGATCATCTCATTTGTCTAAGGATGGCAGGCTTACTCTTATACAAGCTACTTTGAGAAATCCCCCTATTTACTACTTGTCTCTTTACAAGGCTTCCACAAAAGTGGCTAAACAATTAGAGAAGCTTGATAGAAACATCCTCTGGAGTGGTAGCAAGGAAAACAAAGGCCTTCATCTCCTTAAATGGAATACTGTCTAAGCCCCCTGGAGGATGGTGACCTTGGGACCTTGGGTATACAACAAAGGAATGATTTTCCAAATGTTGAAGTCTGGGCAATCATATTCAAGAAAAGAGTACTAAAGAAGAAGACAAATTGCCGGCTTCAGTTCCTTGCCAATTAAGGGAGAGAAGATCTAGGAAGATAGGACCCTGGACCCTTACCTAGTTCCAAGATTTTGTCAAGAACACAAAGTCAAGTAAGTACGAGGAAGAGTGGAGTGTAAGTAGCAACCTCAACTTCGGGTCATGACTTCAAGTTCAAGCCAAAAATAGACCTACATACTGCTAGGCCTCCTATTATTTTTCAGTATCAACATAAGGGTAAAAAAGGGAATATACATGTTAGTGAGATAAGAGAATAGTCTAACAGTTAATGGACGGTTACTTAGGTTGGGAATGTAGAGGTTATATGTAATGGGAAGTTAGTAGAGGAAGGTAGTCAGTTTTTTAGTTTGGAAGTCAGTTCTTCTCGAGAGTGGGAGGATGAGAACTTTGTACTTTGCCCACGGGCATGTTTCTTAATTTGAATAAGAATCACTATCTCGATTCCTATCAGATACATCTTCAATATAGTTGGAGACCAGCTAGAGGAAGATATTGTTGATAAAGAAGAATTAGAATGGATACTGACCATGGATACTAACCATGAGGGTTTTCTGAGATTAGAAGATCAAGAAGGGCGTCCTCCCTTTTGATGGATGATTGAACCTAGTTGGTTTCACATTATTTAGAGAAAATTGATGAATCTTCTTTTTCTAATATGGAGATCCCCCAGAAGAAAGAAGAAAAGCAAAATTACTTTTGTACACAAAATAAAGGCAGAAGTGGCAACTTGGTGGGATTATTAACAGCAAATAGAATGAGAATGAGGAAAACACATATCGAGCTGTAGGCAAAAATGAGAATGTTGTTGAAAGAAAGATTTATCTTTGGGAATTATGAACAACTGTACCTGGAATATCAAGATTATCGTCAAAGAACTTGATTTGTACCAGAATATGTATAGGAATAGGTGTTGCCCAAACACTTAAGTGATTTACTTGACTTAATGTCAGCAAGTGGTCCAATTTTTCACGGATAAAACAAGAAAATTCAAGACTGAATTTACCCTTTTCCCTTTCTTCTTATAGAAGCCAATGCCACAGGTTAGAGGATATAAATTCAAATGAAGAAAGAAGAAGAACAAAATAAAAGAGTACAGACTGTTCCTTTTTGTAGGCTCCTCCTTTCGTACTTTTTTTCAGTTAAGTCACGGTGTCCAAAGTTGGAGTCTGTGTTTTGTGATTGTGTTCATGCTCTTTTAATTTTTCTTGTGTTTTCTTTATCTATATATATTCATATGAAGTACCTTTACCTGTAGTGCAAGAACTTTAACAGCTACATATAGGATGTTTCTCATTTTTCCAGTTGAGTGTATCAGTGTATCACTTAGCTTCACTGTGAACACCAATTTGAAAGCTTACTCCTACCAGTATTCTCTTACAATGATATGTATGCAGCCGTGCTCATTTAGATGTTTAGCTTGCTACCTTCTGTGCTACATGATGCATCGTAGTCTAGCTGACTACTGACTTTATTTTGTTTTTTATATTCCCTATCAAGTCTTCTTTTTCGTATATGAAAAGTTTGGTCGTTCTTCCTTTTAAATGTACATGTGATCTGCGTAGATATGATGATCCAGACAGTGCTCAATCCTCTTTCTCTATGCTACTGGGAGATGCTCCTCACCTTGATGGAACAGTATGCAATTGCCATTTTAAACATCAGACTGAAAAATCAGTTTAGTTCAGATATTTGGAACAGAAGCTAATGAGTATGTTTGCTTCTACTTTCTCAGTATGCAATCTTTGGAAAAGTTACCAAAGGTGATGATACATTGAAAAAACTTGAAGAACTTCCTACTCGCCGTGAGGGTATATTCGTAATGGTAAACATAGTATCCTTTCTTTTAGTCCAGCAGTTGGATAATCAAGGCTTGATAAGCTATCATTTGCTTGTGACTTTTGAGAATTTGTTCAAGTTTGTGCTCTAACCTCTCATTAAGTGCATATATTTATACATAGCCATTTGCTAGAACTCCACCGTTTGTTTGCCTTCTTTTGGAACTTCCTGACATTTTCTTTGGCACTTGGCTTGTTCAGCCGTTCACATATCAATGTTGCATTCAAGTCGTTTTTGTTGTTTTTTTTATATTTTTCCATTTCTTCTGAACATGTTCACTCGACAACATTATTATGCTTTTCAGTTGACTTATTTGCATTTCCCCCTTAGTTCTTGGGATTGGGGTGTTGTGCTATACAATAATGAGATTAAAACGTATGGGTAGCAGGAGTATTTTAAACTCATTCCCCTCCCCTGTAAAATTAGTCATGAACTTTTATGTTAATTATTTTTCTAGGATAAATCGCCACGTTCATTGGTAGCAGGAGTATTTGAAACTCATTCCCCTCCCTTCATTACAAAGTACTTAATGCCCCATTATATTTTGAATAGAGGCTTAGATGGTTAATTTATAATGTGATAGAACCCAAACATATTGAAATACACAAGATACTAGAATTACAAGATAAACCAACTCCCAAACCCTAATTCACTCACCAAAATAATGTTTAACCCCTTCCTTCTTCATTCCCTCTATTTATTATAAAAATCCCCTAACAACTCCCTTCTCTACTTGCTACTATACCCTTAATACGTCAATAATATTCCTAATTCCACTCTAATAGCATTCCTATCATGATGTTCAAGTATTCATGCATGGGTGGAGTTACTCTAGCCAATAATCTTTACGTGGTTTGATTGATTTGGACGATGTAAACTCTGCTATTCTGTGACGATTGATGTTTCACTGAATATTTGTCCCCACTAAAAGTTTTTCTAGTTCAATGTTGCATTGATTACTATTATCATCTTTCTCATCACTGTTCTCCTTGTAAATTGATCATTAATCATGTTTTCTTTCAGCCAACTGAGCGCATAACAATACTATCATCATACTATTACGGTGAGAATATTAATCCTTCTATTGTACTCGTCTCTTGTTGGATTTAGGACTCATGTTTTACATAGGGAAATGTATATTGTCAATTATTCTGATTGTCGTAGCTCCTCCTAATCTTATGAGGTCCTCGACATCACTCCTTTGGTCTCTTTTGCATTTAGATACCAATTTGGAGAGTTGTGAAGAGGAGAGATCAACCTTGAAGCAAAGGCTTGCTGCATCCTTCGTCGAGATTGAAAGACAGGTAAGAACAGCCAAGTTTTAG ATGCAGAGACTTTCTGTGCTGCCGATCGTCGCTGGTCATCTATTTCTTGCATTGTTCACCATCGCTTCAGCTCAGGATTCCCATCTCGGATCCGCTCGTGTAGTATTTCAGACGAATTATGGAGATATCGAATTCGGTTTCTTCCCCAACGTAGCACCCAAAACCGTTGACCACATTTTCAAACTTGTTCGTCTCGGATGCTATAACACCAATCACTTCTTTCGGGTTGATAAAGGGTTTGTGGCGCAAGTGGCAGATGTAGTGGGGGGAAGATTAGCTCCCATGAACGAGGAACAAAGAGCGGAAGCTGAGAAGACTGTTGTTGGTGAATTTAGTGATGTTAAACACGTTAGAGGAATTCTTTCTATGGGGAGATATGATGATCCAGACAGTGCTCAATCCTCTTTCTCTATGCTACTGGGAGATGCTCCTCACCTTGATGGAACATATGCAATCTTTGGAAAAGTTACCAAAGGTGATGATACATTGAAAAAACTTGAAGAACTTCCTACTCGCCGTGAGGGTATATTCGTAATGCCAACTGAGCGCATAACAATACTATCATCATACTATTACGCTCCTCCTAATCTTATGAGGTCCTCGACATCACTCCTTTGGTCTCTTTTGCATTTAGATACCAATTTGGAGAGTTGTGAAGAGGAGAGATCAACCTTGAAGCAAAGGCTTGCTGCATCCTTCGTCGAGATTGAAAGACAGGTAAGAACAGCCAAGTTTTAG ATGCAGAGACTTTCTGTGCTGCCGATCGTCGCTGGTCATCTATTTCTTGCATTGTTCACCATCGCTTCAGCTCAGGATTCCCATCTCGGATCCGCTCGTGTAGTATTTCAGACGAATTATGGAGATATCGAATTCGGTTTCTTCCCCAACGTAGCACCCAAAACCGTTGACCACATTTTCAAACTTGTTCGTCTCGGATGCTATAACACCAATCACTTCTTTCGGGTTGATAAAGGGTTTGTGGCGCAAGTGGCAGATGTAGTGGGGGGAAGATTAGCTCCCATGAACGAGGAACAAAGAGCGGAAGCTGAGAAGACTGTTGTTGGTGAATTTAGTGATGTTAAACACGTTAGAGGAATTCTTTCTATGGGGAGATATGATGATCCAGACAGTGCTCAATCCTCTTTCTCTATGCTACTGGGAGATGCTCCTCACCTTGATGGAACATATGCAATCTTTGGAAAAGTTACCAAAGGTGATGATACATTGAAAAAACTTGAAGAACTTCCTACTCGCCGTGAGGGTATATTCGTAATGCCAACTGAGCGCATAACAATACTATCATCATACTATTACGCTCCTCCTAATCTTATGAGGTCCTCGACATCACTCCTTTGGTCTCTTTTGCATTTAGATACCAATTTGGAGAGTTGTGAAGAGGAGAGATCAACCTTGAAGCAAAGGCTTGCTGCATCCTTCGTCGAGATTGAAAGACAGGTAAGAACAGCCAAGTTTTAG MQRLSVLPIVAGHLFLALFTIASAQDSHLGSARVVFQTNYGDIEFGFFPNVAPKTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRLAPMNEEQRAEAEKTVVGEFSDVKHVRGILSMGRYDDPDSAQSSFSMLLGDAPHLDGTYAIFGKVTKGDDTLKKLEELPTRREGIFVMPTERITILSSYYYAPPNLMRSSTSLLWSLLHLDTNLESCEEERSTLKQRLAASFVEIERQVRTAKF Homology
BLAST of HG10005947 vs. NCBI nr
Match: XP_038889441.1 (peptidyl-prolyl cis-trans isomerase CYP23 [Benincasa hispida]) HSP 1 Score: 409.1 bits (1050), Expect = 2.7e-110 Identity = 210/239 (87.87%), Postives = 212/239 (88.70%), Query Frame = 0
BLAST of HG10005947 vs. NCBI nr
Match: XP_008441717.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP23 isoform X2 [Cucumis melo]) HSP 1 Score: 404.1 bits (1037), Expect = 8.8e-109 Identity = 208/239 (87.03%), Postives = 211/239 (88.28%), Query Frame = 0
BLAST of HG10005947 vs. NCBI nr
Match: XP_004138913.1 (peptidyl-prolyl cis-trans isomerase CYP23 [Cucumis sativus] >KAE8651746.1 hypothetical protein Csa_006100 [Cucumis sativus]) HSP 1 Score: 396.7 bits (1018), Expect = 1.4e-106 Identity = 204/239 (85.36%), Postives = 210/239 (87.87%), Query Frame = 0
BLAST of HG10005947 vs. NCBI nr
Match: XP_008441716.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Cucumis melo]) HSP 1 Score: 396.7 bits (1018), Expect = 1.4e-106 Identity = 208/247 (84.21%), Postives = 211/247 (85.43%), Query Frame = 0
BLAST of HG10005947 vs. NCBI nr
Match: XP_022144529.1 (peptidyl-prolyl cis-trans isomerase CYP23 [Momordica charantia]) HSP 1 Score: 386.3 bits (991), Expect = 1.9e-103 Identity = 199/239 (83.26%), Postives = 206/239 (86.19%), Query Frame = 0
BLAST of HG10005947 vs. ExPASy Swiss-Prot
Match: Q8LDR3 (Peptidyl-prolyl cis-trans isomerase CYP23 OS=Arabidopsis thaliana OX=3702 GN=CYP23 PE=2 SV=1) HSP 1 Score: 332.4 bits (851), Expect = 4.3e-90 Identity = 172/233 (73.82%), Postives = 188/233 (80.69%), Query Frame = 0
BLAST of HG10005947 vs. ExPASy Swiss-Prot
Match: Q2YPY5 (Probable peptidyl-prolyl cis-trans isomerase OS=Brucella abortus (strain 2308) OX=359391 GN=ppi PE=3 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.1e-16 Identity = 54/155 (34.84%), Postives = 76/155 (49.03%), Query Frame = 0
BLAST of HG10005947 vs. ExPASy Swiss-Prot
Match: Q57D43 (Probable peptidyl-prolyl cis-trans isomerase OS=Brucella abortus biovar 1 (strain 9-941) OX=262698 GN=ppi PE=3 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.1e-16 Identity = 54/155 (34.84%), Postives = 76/155 (49.03%), Query Frame = 0
BLAST of HG10005947 vs. ExPASy Swiss-Prot
Match: Q8YHB5 (Probable peptidyl-prolyl cis-trans isomerase OS=Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) OX=224914 GN=ppi PE=3 SV=2) HSP 1 Score: 88.6 bits (218), Expect = 1.1e-16 Identity = 54/155 (34.84%), Postives = 76/155 (49.03%), Query Frame = 0
BLAST of HG10005947 vs. ExPASy Swiss-Prot
Match: Q8G0J9 (Probable peptidyl-prolyl cis-trans isomerase OS=Brucella suis biovar 1 (strain 1330) OX=204722 GN=ppi PE=3 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.1e-16 Identity = 54/155 (34.84%), Postives = 76/155 (49.03%), Query Frame = 0
BLAST of HG10005947 vs. ExPASy TrEMBL
Match: A0A1S3B3L0 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103485795 PE=3 SV=1) HSP 1 Score: 404.1 bits (1037), Expect = 4.3e-109 Identity = 208/239 (87.03%), Postives = 211/239 (88.28%), Query Frame = 0
BLAST of HG10005947 vs. ExPASy TrEMBL
Match: A0A1S3B4U1 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103485795 PE=3 SV=1) HSP 1 Score: 396.7 bits (1018), Expect = 6.8e-107 Identity = 208/247 (84.21%), Postives = 211/247 (85.43%), Query Frame = 0
BLAST of HG10005947 vs. ExPASy TrEMBL
Match: A0A6J1CSJ8 (Peptidyl-prolyl cis-trans isomerase OS=Momordica charantia OX=3673 GN=LOC111014190 PE=3 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 9.2e-104 Identity = 199/239 (83.26%), Postives = 206/239 (86.19%), Query Frame = 0
BLAST of HG10005947 vs. ExPASy TrEMBL
Match: A0A6J1K609 (peptidyl-prolyl cis-trans isomerase CYP23 OS=Cucurbita maxima OX=3661 GN=LOC111492632 PE=4 SV=1) HSP 1 Score: 381.3 bits (978), Expect = 3.0e-102 Identity = 197/239 (82.43%), Postives = 204/239 (85.36%), Query Frame = 0
BLAST of HG10005947 vs. ExPASy TrEMBL
Match: A0A6J1G8S9 (peptidyl-prolyl cis-trans isomerase CYP23 OS=Cucurbita moschata OX=3662 GN=LOC111452012 PE=4 SV=1) HSP 1 Score: 381.3 bits (978), Expect = 3.0e-102 Identity = 197/239 (82.43%), Postives = 204/239 (85.36%), Query Frame = 0
BLAST of HG10005947 vs. TAIR 10
Match: AT1G26940.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 332.4 bits (851), Expect = 3.0e-91 Identity = 172/233 (73.82%), Postives = 188/233 (80.69%), Query Frame = 0
BLAST of HG10005947 vs. TAIR 10
Match: AT3G44600.1 (cyclophilin71 ) HSP 1 Score: 63.9 bits (154), Expect = 2.0e-10 Identity = 41/141 (29.08%), Postives = 65/141 (46.10%), Query Frame = 0
BLAST of HG10005947 vs. TAIR 10
Match: AT1G01940.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 62.8 bits (151), Expect = 4.5e-10 Identity = 46/142 (32.39%), Postives = 65/142 (45.77%), Query Frame = 0
BLAST of HG10005947 vs. TAIR 10
Match: AT2G36130.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 59.7 bits (143), Expect = 3.8e-09 Identity = 43/140 (30.71%), Postives = 66/140 (47.14%), Query Frame = 0
BLAST of HG10005947 vs. TAIR 10
Match: AT1G53720.1 (cyclophilin 59 ) HSP 1 Score: 56.2 bits (134), Expect = 4.2e-08 Identity = 39/141 (27.66%), Postives = 64/141 (45.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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