HG10005941 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005941
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	HTH myb-type domain-containing protein
Location	Chr07: 9224989 .. 9225540 (+)
RNA-Seq Expression	HG10005941
Synteny	HG10005941

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATATCAGAAGCTCTAGAAATGCAAATGGAAGTACAGAAGAGACTACAAGAGCAAATAGAGGTGCAAAGGCATTTGCAGCTGAGAATCGAAGCACAAGGCAAATATTTAAAGACAGTGTTAAGAAAGGCACAAGAGACAATTGCAGGGTACGGATGTTATTCTGAAGCACTTGAAGAGGCCAAAGCAGAGCTCTCTCAATTAGCTTCAATGGTGAGCTCTGGTTGTCAGAGCTCTTCTTTATCAGAATTGACTGACTCGACAGAACTGAATTTCAAAGGCATTGAAAGAGTGGGAAGAAGAATGTGTTCCATGGAAAGCTCTTTAACGTCTTCAGAGACCTCAGAGGAGGCCCCAATCACGAAGAAGAGAAAAGGAAAAGAAAAGGGAAAAGAACAGAGCCGCTCTGTTTCTGAGGGAGATTGTAAGAGATTAACAGTGCATAAAAGTGATGAGGAACACGAGGAATTCAGAATGATCGACTTGAATGATTCTCAATTTGAAGATACAGCAATTGGAATTGGATCACAGTTGATTGAGTTTCTTTAA

mRNA sequence

ATGAAGATATCAGAAGCTCTAGAAATGCAAATGGAAGTACAGAAGAGACTACAAGAGCAAATAGAGGTGCAAAGGCATTTGCAGCTGAGAATCGAAGCACAAGGCAAATATTTAAAGACAGTGTTAAGAAAGGCACAAGAGACAATTGCAGGGTACGGATGTTATTCTGAAGCACTTGAAGAGGCCAAAGCAGAGCTCTCTCAATTAGCTTCAATGGTGAGCTCTGGTTGTCAGAGCTCTTCTTTATCAGAATTGACTGACTCGACAGAACTGAATTTCAAAGGCATTGAAAGAGTGGGAAGAAGAATGTGTTCCATGGAAAGCTCTTTAACGTCTTCAGAGACCTCAGAGGAGGCCCCAATCACGAAGAAGAGAAAAGGAAAAGAAAAGGGAAAAGAACAGAGCCGCTCTGTTTCTGAGGGAGATTGTAAGAGATTAACAGTGCATAAAAGTGATGAGGAACACGAGGAATTCAGAATGATCGACTTGAATGATTCTCAATTTGAAGATACAGCAATTGGAATTGGATCACAGTTGATTGAGTTTCTTTAA

Coding sequence (CDS)

ATGAAGATATCAGAAGCTCTAGAAATGCAAATGGAAGTACAGAAGAGACTACAAGAGCAAATAGAGGTGCAAAGGCATTTGCAGCTGAGAATCGAAGCACAAGGCAAATATTTAAAGACAGTGTTAAGAAAGGCACAAGAGACAATTGCAGGGTACGGATGTTATTCTGAAGCACTTGAAGAGGCCAAAGCAGAGCTCTCTCAATTAGCTTCAATGGTGAGCTCTGGTTGTCAGAGCTCTTCTTTATCAGAATTGACTGACTCGACAGAACTGAATTTCAAAGGCATTGAAAGAGTGGGAAGAAGAATGTGTTCCATGGAAAGCTCTTTAACGTCTTCAGAGACCTCAGAGGAGGCCCCAATCACGAAGAAGAGAAAAGGAAAAGAAAAGGGAAAAGAACAGAGCCGCTCTGTTTCTGAGGGAGATTGTAAGAGATTAACAGTGCATAAAAGTGATGAGGAACACGAGGAATTCAGAATGATCGACTTGAATGATTCTCAATTTGAAGATACAGCAATTGGAATTGGATCACAGTTGATTGAGTTTCTTTAA

Protein sequence

MKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALEEAKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRRMCSMESSLTSSETSEEAPITKKRKGKEKGKEQSRSVSEGDCKRLTVHKSDEEHEEFRMIDLNDSQFEDTAIGIGSQLIEFL

Homology

[Close]

BLAST of HG10005941 vs. NCBI nr
Match: XP_038889648.1 (myb family transcription factor PHL8-like isoform X1 [Benincasa hispida])

HSP 1 Score: 305.4 bits (781), Expect = 3.2e-79
Identity = 167/183 (91.26%), Postives = 177/183 (96.72%), Query Frame = 0


Query: 1   MKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALE 60
           MKISEAL+MQ+EVQK+LQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGC SEALE
Sbjct: 113 MKISEALQMQLEVQKKLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCCSEALE 172

Query: 61  EAKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRRMCSMESSLTSSETSEEAP 120
           EAKAELSQLASMVSSGCQSSS+SELTDSTELNFKG ERVGRRMCS+ESSLTSSETSEEAP
Sbjct: 173 EAKAELSQLASMVSSGCQSSSISELTDSTELNFKGFERVGRRMCSIESSLTSSETSEEAP 232

Query: 121 ITKKRKGKEKGKEQSRSVSEGDCKRLTVHKSDEEHEEFRMIDLNDSQFEDTAIGIGSQLI 180
           IT+KRKGKEK KEQS SVSEGDCKRLT+HKSDEEH+EFRMIDLNDSQF++TAIGI S LI
Sbjct: 233 ITRKRKGKEKEKEQSSSVSEGDCKRLTMHKSDEEHDEFRMIDLNDSQFDNTAIGIASLLI 292

Query: 181 EFL 184
           EFL
Sbjct: 293 EFL 295

[Close]

BLAST of HG10005941 vs. NCBI nr
Match: XP_038889649.1 (myb family transcription factor PHL8-like isoform X2 [Benincasa hispida])

HSP 1 Score: 305.4 bits (781), Expect = 3.2e-79
Identity = 167/183 (91.26%), Postives = 177/183 (96.72%), Query Frame = 0


Query: 1   MKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALE 60
           MKISEAL+MQ+EVQK+LQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGC SEALE
Sbjct: 107 MKISEALQMQLEVQKKLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCCSEALE 166

Query: 61  EAKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRRMCSMESSLTSSETSEEAP 120
           EAKAELSQLASMVSSGCQSSS+SELTDSTELNFKG ERVGRRMCS+ESSLTSSETSEEAP
Sbjct: 167 EAKAELSQLASMVSSGCQSSSISELTDSTELNFKGFERVGRRMCSIESSLTSSETSEEAP 226

Query: 121 ITKKRKGKEKGKEQSRSVSEGDCKRLTVHKSDEEHEEFRMIDLNDSQFEDTAIGIGSQLI 180
           IT+KRKGKEK KEQS SVSEGDCKRLT+HKSDEEH+EFRMIDLNDSQF++TAIGI S LI
Sbjct: 227 ITRKRKGKEKEKEQSSSVSEGDCKRLTMHKSDEEHDEFRMIDLNDSQFDNTAIGIASLLI 286

Query: 181 EFL 184
           EFL
Sbjct: 287 EFL 289

[Close]

BLAST of HG10005941 vs. NCBI nr
Match: XP_004138915.1 (myb family transcription factor PHL8 [Cucumis sativus] >KGN61374.1 hypothetical protein Csa_006332 [Cucumis sativus])

HSP 1 Score: 238.0 bits (606), Expect = 6.3e-59
Identity = 144/183 (78.69%), Postives = 154/183 (84.15%), Query Frame = 0


Query: 1   MKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALE 60
           MKISEALEMQ++VQKRLQEQIEVQ+HLQL+IEAQGKYLK VLRKAQETIAGYGC SEALE
Sbjct: 114 MKISEALEMQLQVQKRLQEQIEVQKHLQLKIEAQGKYLKIVLRKAQETIAGYGCCSEALE 173

Query: 61  EAKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRRMCSMESSLTSSETSEEAP 120
           EAKAELSQLASMVSSGCQSS LSELTDSTELNFKGIERVGRRMCS+ESSLTSSETSEEAP
Sbjct: 174 EAKAELSQLASMVSSGCQSSCLSELTDSTELNFKGIERVGRRMCSIESSLTSSETSEEAP 233

Query: 121 ITKKRKGKEKGKEQSRSVSEGDCKRLTVHKSDEEHEEFRMIDLNDSQFEDTAIGIGSQLI 180
           ITKKRKGKE  KE+S SV              EE +E RM+DLN     DTAIG  S+LI
Sbjct: 234 ITKKRKGKE--KEESSSVC-------------EEDKELRMMDLN-----DTAIGFESKLI 276

Query: 181 EFL 184
           +FL
Sbjct: 294 QFL 276

[Close]

BLAST of HG10005941 vs. NCBI nr
Match: XP_008441712.1 (PREDICTED: myb family transcription factor APL [Cucumis melo])

HSP 1 Score: 236.1 bits (601), Expect = 2.4e-58
Identity = 145/187 (77.54%), Postives = 157/187 (83.96%), Query Frame = 0


Query: 1   MKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALE 60
           MKISEALEMQ++VQKRLQEQIEVQ+HLQL+IEAQGKYLK VLRKAQETIAGYGC SEALE
Sbjct: 118 MKISEALEMQLQVQKRLQEQIEVQKHLQLKIEAQGKYLKIVLRKAQETIAGYGCCSEALE 177

Query: 61  EAKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERV--GRRMCSMESSLTSSETSEE 120
           EAKAELSQLASMVSSGCQSS LSELTDSTEL+FKG ERV  GRRMCS+ESSLTSSETSEE
Sbjct: 178 EAKAELSQLASMVSSGCQSSCLSELTDSTELSFKGTERVGSGRRMCSIESSLTSSETSEE 237

Query: 121 APITKKRK--GKEKGKEQSRSVSEGDCKRLTVHKSDEEHEEFRMIDLNDSQFEDTAIGIG 180
           AP TKKRK  GKEK KE+S SV E         + +EE EE RM+DLN     DTAIG G
Sbjct: 238 APTTKKRKGNGKEKEKEESSSVCE---------EEEEEEEELRMMDLN-----DTAIGFG 290

Query: 181 SQLIEFL 184
           S+LI+FL
Sbjct: 298 SKLIQFL 290

[Close]

BLAST of HG10005941 vs. NCBI nr
Match: KAA0032252.1 (myb family transcription factor APL [Cucumis melo var. makuwa])

HSP 1 Score: 236.1 bits (601), Expect = 2.4e-58
Identity = 145/187 (77.54%), Postives = 157/187 (83.96%), Query Frame = 0


Query: 1   MKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALE 60
           MKISEALEMQ++VQKRLQEQIEVQ+HLQL+IEAQGKYLK VLRKAQETIAGYGC SEALE
Sbjct: 1   MKISEALEMQLQVQKRLQEQIEVQKHLQLKIEAQGKYLKIVLRKAQETIAGYGCCSEALE 60

Query: 61  EAKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERV--GRRMCSMESSLTSSETSEE 120
           EAKAELSQLASMVSSGCQSS LSELTDSTEL+FKG ERV  GRRMCS+ESSLTSSETSEE
Sbjct: 61  EAKAELSQLASMVSSGCQSSCLSELTDSTELSFKGTERVGSGRRMCSIESSLTSSETSEE 120

Query: 121 APITKKRK--GKEKGKEQSRSVSEGDCKRLTVHKSDEEHEEFRMIDLNDSQFEDTAIGIG 180
           AP TKKRK  GKEK KE+S SV E         + +EE EE RM+DLN     DTAIG G
Sbjct: 121 APTTKKRKGNGKEKEKEESSSVCE---------EEEEEEEELRMMDLN-----DTAIGFG 173

Query: 181 SQLIEFL 184
           S+LI+FL
Sbjct: 181 SKLIQFL 173

[Close]

BLAST of HG10005941 vs. ExPASy Swiss-Prot
Match: F4I274 (Myb family transcription factor PHL8 OS=Arabidopsis thaliana OX=3702 GN=PHL8 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.8e-25
Identity = 89/201 (44.28%), Postives = 122/201 (60.70%), Query Frame = 0


Query: 1   MKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALE 60
           ++I+EAL+MQMEVQK+L EQIEVQRHLQ++IEAQGKYL++VL KAQ+T+AGY   +  ++
Sbjct: 136 LQITEALQMQMEVQKKLHEQIEVQRHLQVKIEAQGKYLQSVLMKAQQTLAGYSSSNLGMD 195

Query: 61  EAKAELSQLASMVSSGCQSSSLSELTDSTE-----LNFKGIER--VGRRMCSMESSLTSS 120
            A+ ELS+LASMV+ GC S+S SELT   E     L +K  E   + +  CS+ESSLTSS
Sbjct: 196 FARTELSRLASMVNRGCPSTSFSELTQVEEEEEGFLWYKKPENRGISQLRCSVESSLTSS 255

Query: 121 ETSE-------------EAPITKKRKGKEKGKEQSRSVSEGDCKRLTVHK-----SDEEH 177
           ETSE             E P+ +      KGK+  RS+++  C    + K      D+EH
Sbjct: 256 ETSETKLDTDNNLNKSIELPLMEINSEVMKGKK--RSINDVVCVEQPLMKRAFGVDDDEH 315

[Close]

BLAST of HG10005941 vs. ExPASy Swiss-Prot
Match: Q9FK47 (Myb-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=MYR1 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 6.6e-19
Identity = 58/120 (48.33%), Postives = 84/120 (70.00%), Query Frame = 0


Query: 1   MKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALE 60
           + IS+AL+MQ+EVQ+RL EQ+EVQRHLQLRIEAQGKYL+++L KAQET+      +  +E
Sbjct: 145 LPISDALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSILEKAQETLGRQNLGAAGIE 204

Query: 61  EAKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRRMCSMESSLTSSETSEEAP 120
             KA+LS+L S VS+    SS  E  +   L+ + +++      S++S LTSSE +++AP
Sbjct: 205 ATKAQLSELVSKVSADYPDSSFLEPKELQNLHHQQMQKTYPPNSSLDSCLTSSEGTQKAP 264

[Close]

BLAST of HG10005941 vs. ExPASy Swiss-Prot
Match: Q9SQQ9 (Myb-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=MYR2 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 7.3e-18
Identity = 59/116 (50.86%), Postives = 80/116 (68.97%), Query Frame = 0


Query: 3   ISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALEEA 62
           I EAL+MQ+EVQ+RL EQ+EVQRHLQLRIEAQGKYL++VL KAQET+      +  +E A
Sbjct: 147 IGEALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGAAGIEAA 206

Query: 63  KAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRRMCSMESSLTSSETSEE 119
           K +LS+L S VS+   +SS  E  +   L  + ++      CS+ES LTSSE +++
Sbjct: 207 KVQLSELVSKVSAEYPNSSFLEPKELQNLCSQQMQTNYPPDCSLESCLTSSEGTQK 262

[Close]

BLAST of HG10005941 vs. ExPASy Swiss-Prot
Match: Q8LAJ7 (Protein PHR1-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=PHL3 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.7e-14
Identity = 58/134 (43.28%), Postives = 83/134 (61.94%), Query Frame = 0


Query: 2   KISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALEE 61
           +++EAL  QMEVQ+RL EQ+EVQR LQLRIEAQGKYL+++L KA + I         LE 
Sbjct: 135 QVTEALRAQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILEKACKAIEEQAVAFAGLEA 194

Query: 62  AKAELSQLA--SMVSSGCQSSSLSELTDSTELNFKGIERVG-----RRMCSMESSLTSSE 121
           A+ ELS+LA  + +++GCQ +  +   D+T++    +  +      +  CS ESSLTSS 
Sbjct: 195 AREELSELAIKASITNGCQGT--TSTFDTTKMMIPSLSELAVAIEHKNNCSAESSLTSST 254

Query: 122 TSE--EAPITKKRK 127
                 A + KKR+
Sbjct: 255 VGSPVSAALMKKRQ 266

[Close]

BLAST of HG10005941 vs. ExPASy Swiss-Prot
Match: Q94A57 (Protein PHR1-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=PHL2 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.7e-11
Identity = 54/142 (38.03%), Postives = 80/142 (56.34%), Query Frame = 0


Query: 2   KISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALEE 61
           +++EAL  QMEVQ+RL +Q+EVQR LQLRIEAQGKYL+++L KA +           LE 
Sbjct: 139 QVTEALRAQMEVQRRLHDQLEVQRRLQLRIEAQGKYLQSILEKACKAFDEQAATFAGLEA 198

Query: 62  AKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRRM---------CSMESSLTS 121
           A+ ELS+LA  VS+  Q +S+     +  +    +  +   +         CS+ESSLTS
Sbjct: 199 AREELSELAIKVSNSSQGTSVPYFDATKMMMMPSLSELAVAIDNKNNITTNCSVESSLTS 258

Query: 122 ---SETSEEAPITKKRKGKEKG 132
                +   A + K+++G   G
Sbjct: 259 ITHGSSISAASMKKRQRGDNLG 280

[Close]

BLAST of HG10005941 vs. ExPASy TrEMBL
Match: A0A0A0LJX4 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G100560 PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 3.0e-59
Identity = 144/183 (78.69%), Postives = 154/183 (84.15%), Query Frame = 0


Query: 1   MKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALE 60
           MKISEALEMQ++VQKRLQEQIEVQ+HLQL+IEAQGKYLK VLRKAQETIAGYGC SEALE
Sbjct: 114 MKISEALEMQLQVQKRLQEQIEVQKHLQLKIEAQGKYLKIVLRKAQETIAGYGCCSEALE 173

Query: 61  EAKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRRMCSMESSLTSSETSEEAP 120
           EAKAELSQLASMVSSGCQSS LSELTDSTELNFKGIERVGRRMCS+ESSLTSSETSEEAP
Sbjct: 174 EAKAELSQLASMVSSGCQSSCLSELTDSTELNFKGIERVGRRMCSIESSLTSSETSEEAP 233

Query: 121 ITKKRKGKEKGKEQSRSVSEGDCKRLTVHKSDEEHEEFRMIDLNDSQFEDTAIGIGSQLI 180
           ITKKRKGKE  KE+S SV              EE +E RM+DLN     DTAIG  S+LI
Sbjct: 234 ITKKRKGKE--KEESSSVC-------------EEDKELRMMDLN-----DTAIGFESKLI 276

Query: 181 EFL 184
           +FL
Sbjct: 294 QFL 276

[Close]

BLAST of HG10005941 vs. ExPASy TrEMBL
Match: A0A5A7SMI9 (Myb family transcription factor APL OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00840 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.2e-58
Identity = 145/187 (77.54%), Postives = 157/187 (83.96%), Query Frame = 0


Query: 1   MKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALE 60
           MKISEALEMQ++VQKRLQEQIEVQ+HLQL+IEAQGKYLK VLRKAQETIAGYGC SEALE
Sbjct: 1   MKISEALEMQLQVQKRLQEQIEVQKHLQLKIEAQGKYLKIVLRKAQETIAGYGCCSEALE 60

Query: 61  EAKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERV--GRRMCSMESSLTSSETSEE 120
           EAKAELSQLASMVSSGCQSS LSELTDSTEL+FKG ERV  GRRMCS+ESSLTSSETSEE
Sbjct: 61  EAKAELSQLASMVSSGCQSSCLSELTDSTELSFKGTERVGSGRRMCSIESSLTSSETSEE 120

Query: 121 APITKKRK--GKEKGKEQSRSVSEGDCKRLTVHKSDEEHEEFRMIDLNDSQFEDTAIGIG 180
           AP TKKRK  GKEK KE+S SV E         + +EE EE RM+DLN     DTAIG G
Sbjct: 121 APTTKKRKGNGKEKEKEESSSVCE---------EEEEEEEELRMMDLN-----DTAIGFG 173

Query: 181 SQLIEFL 184
           S+LI+FL
Sbjct: 181 SKLIQFL 173

[Close]

BLAST of HG10005941 vs. ExPASy TrEMBL
Match: A0A1S3B431 (myb family transcription factor APL OS=Cucumis melo OX=3656 GN=LOC103485789 PE=3 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.2e-58
Identity = 145/187 (77.54%), Postives = 157/187 (83.96%), Query Frame = 0


Query: 1   MKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALE 60
           MKISEALEMQ++VQKRLQEQIEVQ+HLQL+IEAQGKYLK VLRKAQETIAGYGC SEALE
Sbjct: 118 MKISEALEMQLQVQKRLQEQIEVQKHLQLKIEAQGKYLKIVLRKAQETIAGYGCCSEALE 177

Query: 61  EAKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERV--GRRMCSMESSLTSSETSEE 120
           EAKAELSQLASMVSSGCQSS LSELTDSTEL+FKG ERV  GRRMCS+ESSLTSSETSEE
Sbjct: 178 EAKAELSQLASMVSSGCQSSCLSELTDSTELSFKGTERVGSGRRMCSIESSLTSSETSEE 237

Query: 121 APITKKRK--GKEKGKEQSRSVSEGDCKRLTVHKSDEEHEEFRMIDLNDSQFEDTAIGIG 180
           AP TKKRK  GKEK KE+S SV E         + +EE EE RM+DLN     DTAIG G
Sbjct: 238 APTTKKRKGNGKEKEKEESSSVCE---------EEEEEEEELRMMDLN-----DTAIGFG 290

Query: 181 SQLIEFL 184
           S+LI+FL
Sbjct: 298 SKLIQFL 290

[Close]

BLAST of HG10005941 vs. ExPASy TrEMBL
Match: A0A6J1ICT3 (myb family transcription factor PHL8-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471368 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.4e-32
Identity = 104/183 (56.83%), Postives = 114/183 (62.30%), Query Frame = 0


Query: 2   KISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALEE 61
           KI + +EMQMEV+KRLQEQIEVQRHLQLRIEAQGKYLK VLRKA+ETIAGYGC SEALE 
Sbjct: 68  KIWDVMEMQMEVEKRLQEQIEVQRHLQLRIEAQGKYLKRVLRKAEETIAGYGCCSEALE- 127

Query: 62  AKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRRMCSMESSLTSSETSEEAPI 121
              ELSQLASMVSSGC+SS LS                                      
Sbjct: 128 ---ELSQLASMVSSGCESSCLS-------------------------------------- 187

Query: 122 TKKRKGKEKGKEQSRSVSEGDCKRLTVHKSDEEH-EEFRMIDLNDSQFEDTAIGIGSQLI 181
                      EQS SVSEGDCKRLT+ KS E + EEFRMIDLND+    +  GIGS+LI
Sbjct: 188 -----------EQSSSVSEGDCKRLTMQKSYENNQEEFRMIDLNDAA-TGSGSGIGSELI 196

Query: 182 EFL 184
           EFL
Sbjct: 248 EFL 196

[Close]

BLAST of HG10005941 vs. ExPASy TrEMBL
Match: A0A6J1IBC2 (myb family transcription factor PHL8-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471368 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.4e-32
Identity = 104/183 (56.83%), Postives = 114/183 (62.30%), Query Frame = 0


Query: 2   KISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALEE 61
           KI + +EMQMEV+KRLQEQIEVQRHLQLRIEAQGKYLK VLRKA+ETIAGYGC SEALE 
Sbjct: 115 KIWDVMEMQMEVEKRLQEQIEVQRHLQLRIEAQGKYLKRVLRKAEETIAGYGCCSEALE- 174

Query: 62  AKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRRMCSMESSLTSSETSEEAPI 121
              ELSQLASMVSSGC+SS LS                                      
Sbjct: 175 ---ELSQLASMVSSGCESSCLS-------------------------------------- 234

Query: 122 TKKRKGKEKGKEQSRSVSEGDCKRLTVHKSDEEH-EEFRMIDLNDSQFEDTAIGIGSQLI 181
                      EQS SVSEGDCKRLT+ KS E + EEFRMIDLND+    +  GIGS+LI
Sbjct: 235 -----------EQSSSVSEGDCKRLTMQKSYENNQEEFRMIDLNDAA-TGSGSGIGSELI 243

Query: 182 EFL 184
           EFL
Sbjct: 295 EFL 243

[Close]

BLAST of HG10005941 vs. TAIR 10
Match: AT1G69580.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 116.7 bits (291), Expect = 2.0e-26
Identity = 89/201 (44.28%), Postives = 122/201 (60.70%), Query Frame = 0


Query: 1   MKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALE 60
           ++I+EAL+MQMEVQK+L EQIEVQRHLQ++IEAQGKYL++VL KAQ+T+AGY   +  ++
Sbjct: 136 LQITEALQMQMEVQKKLHEQIEVQRHLQVKIEAQGKYLQSVLMKAQQTLAGYSSSNLGMD 195

Query: 61  EAKAELSQLASMVSSGCQSSSLSELTDSTE-----LNFKGIER--VGRRMCSMESSLTSS 120
            A+ ELS+LASMV+ GC S+S SELT   E     L +K  E   + +  CS+ESSLTSS
Sbjct: 196 FARTELSRLASMVNRGCPSTSFSELTQVEEEEEGFLWYKKPENRGISQLRCSVESSLTSS 255

Query: 121 ETSE-------------EAPITKKRKGKEKGKEQSRSVSEGDCKRLTVHK-----SDEEH 177
           ETSE             E P+ +      KGK+  RS+++  C    + K      D+EH
Sbjct: 256 ETSETKLDTDNNLNKSIELPLMEINSEVMKGKK--RSINDVVCVEQPLMKRAFGVDDDEH 315

[Close]

BLAST of HG10005941 vs. TAIR 10
Match: AT1G69580.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 116.7 bits (291), Expect = 2.0e-26
Identity = 89/201 (44.28%), Postives = 122/201 (60.70%), Query Frame = 0


Query: 1   MKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALE 60
           ++I+EAL+MQMEVQK+L EQIEVQRHLQ++IEAQGKYL++VL KAQ+T+AGY   +  ++
Sbjct: 137 LQITEALQMQMEVQKKLHEQIEVQRHLQVKIEAQGKYLQSVLMKAQQTLAGYSSSNLGMD 196

Query: 61  EAKAELSQLASMVSSGCQSSSLSELTDSTE-----LNFKGIER--VGRRMCSMESSLTSS 120
            A+ ELS+LASMV+ GC S+S SELT   E     L +K  E   + +  CS+ESSLTSS
Sbjct: 197 FARTELSRLASMVNRGCPSTSFSELTQVEEEEEGFLWYKKPENRGISQLRCSVESSLTSS 256

Query: 121 ETSE-------------EAPITKKRKGKEKGKEQSRSVSEGDCKRLTVHK-----SDEEH 177
           ETSE             E P+ +      KGK+  RS+++  C    + K      D+EH
Sbjct: 257 ETSETKLDTDNNLNKSIELPLMEINSEVMKGKK--RSINDVVCVEQPLMKRAFGVDDDEH 316

[Close]

BLAST of HG10005941 vs. TAIR 10
Match: AT5G18240.1 (myb-related protein 1 )

HSP 1 Score: 95.5 bits (236), Expect = 4.7e-20
Identity = 58/120 (48.33%), Postives = 84/120 (70.00%), Query Frame = 0


Query: 1   MKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALE 60
           + IS+AL+MQ+EVQ+RL EQ+EVQRHLQLRIEAQGKYL+++L KAQET+      +  +E
Sbjct: 145 LPISDALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSILEKAQETLGRQNLGAAGIE 204

Query: 61  EAKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRRMCSMESSLTSSETSEEAP 120
             KA+LS+L S VS+    SS  E  +   L+ + +++      S++S LTSSE +++AP
Sbjct: 205 ATKAQLSELVSKVSADYPDSSFLEPKELQNLHHQQMQKTYPPNSSLDSCLTSSEGTQKAP 264

[Close]

BLAST of HG10005941 vs. TAIR 10
Match: AT5G18240.4 (myb-related protein 1 )

HSP 1 Score: 95.5 bits (236), Expect = 4.7e-20
Identity = 58/120 (48.33%), Postives = 84/120 (70.00%), Query Frame = 0


Query: 1   MKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALE 60
           + IS+AL+MQ+EVQ+RL EQ+EVQRHLQLRIEAQGKYL+++L KAQET+      +  +E
Sbjct: 145 LPISDALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSILEKAQETLGRQNLGAAGIE 204

Query: 61  EAKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRRMCSMESSLTSSETSEEAP 120
             KA+LS+L S VS+    SS  E  +   L+ + +++      S++S LTSSE +++AP
Sbjct: 205 ATKAQLSELVSKVSADYPDSSFLEPKELQNLHHQQMQKTYPPNSSLDSCLTSSEGTQKAP 264

[Close]

BLAST of HG10005941 vs. TAIR 10
Match: AT3G04030.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 92.0 bits (227), Expect = 5.2e-19
Identity = 59/116 (50.86%), Postives = 80/116 (68.97%), Query Frame = 0


Query: 3   ISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALEEA 62
           I EAL+MQ+EVQ+RL EQ+EVQRHLQLRIEAQGKYL++VL KAQET+      +  +E A
Sbjct: 146 IGEALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGAAGIEAA 205

Query: 63  KAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRRMCSMESSLTSSETSEE 119
           K +LS+L S VS+   +SS  E  +   L  + ++      CS+ES LTSSE +++
Sbjct: 206 KVQLSELVSKVSAEYPNSSFLEPKELQNLCSQQMQTNYPPDCSLESCLTSSEGTQK 261

The following BLAST results are available for this feature:

BLAST of HG10005941 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889648.1	3.2e-79	91.26	myb family transcription factor PHL8-like isoform X1 [Benincasa hispida]	[more]
XP_038889649.1	3.2e-79	91.26	myb family transcription factor PHL8-like isoform X2 [Benincasa hispida]	[more]
XP_004138915.1	6.3e-59	78.69	myb family transcription factor PHL8 [Cucumis sativus] >KGN61374.1 hypothetical ...	[more]
XP_008441712.1	2.4e-58	77.54	PREDICTED: myb family transcription factor APL [Cucumis melo]	[more]
KAA0032252.1	2.4e-58	77.54	myb family transcription factor APL [Cucumis melo var. makuwa]	[more]

BLAST of HG10005941 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I274	2.8e-25	44.28	Myb family transcription factor PHL8 OS=Arabidopsis thaliana OX=3702 GN=PHL8 PE=...	[more]
Q9FK47	6.6e-19	48.33	Myb-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=MYR1 PE=1 SV=1	[more]
Q9SQQ9	7.3e-18	50.86	Myb-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=MYR2 PE=1 SV=1	[more]
Q8LAJ7	3.7e-14	43.28	Protein PHR1-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=PHL3 PE=1 SV=1	[more]
Q94A57	1.7e-11	38.03	Protein PHR1-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=PHL2 PE=1 SV=1	[more]

BLAST of HG10005941 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJX4	3.0e-59	78.69	HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G10056...	[more]
A0A5A7SMI9	1.2e-58	77.54	Myb family transcription factor APL OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3B431	1.2e-58	77.54	myb family transcription factor APL OS=Cucumis melo OX=3656 GN=LOC103485789 PE=3...	[more]
A0A6J1ICT3	1.4e-32	56.83	myb family transcription factor PHL8-like isoform X2 OS=Cucurbita maxima OX=3661...	[more]
A0A6J1IBC2	1.4e-32	56.83	myb family transcription factor PHL8-like isoform X1 OS=Cucurbita maxima OX=3661...	[more]

BLAST of HG10005941 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69580.1	2.0e-26	44.28	Homeodomain-like superfamily protein	[more]
AT1G69580.2	2.0e-26	44.28	Homeodomain-like superfamily protein	[more]
AT5G18240.1	4.7e-20	48.33	myb-related protein 1	[more]
AT5G18240.4	4.7e-20	48.33	myb-related protein 1	[more]
AT3G04030.2	5.2e-19	50.86	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain	PFAM	PF14379	Myb_CC_LHEQLE	coord: 1..48 e-value: 7.2E-23 score: 80.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..155
None	No IPR available	PANTHER	PTHR31499:SF11	MYB FAMILY TRANSCRIPTION FACTOR PHL8	coord: 1..170
IPR044848	PHR1-like	PANTHER	PTHR31499	MYB FAMILY TRANSCRIPTION FACTOR PHL11	coord: 1..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005941.1	HG10005941.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity