HG10005901 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005901
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	50S ribosomal protein L18-like
Location	Chr07: 7956699 .. 7956944 (+)
RNA-Seq Expression	HG10005901
Synteny	HG10005901

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATAGAGGAACTAGCAAAGTGATATCAGTGGCGACAACAAATGCAAAAGATCTTAGAAACAGTCTACCATCACTTACAGATCACAATGCATGTAGAGTAATAGGGAAGCTTATTGCAGAGAGATCAAAGGAAGCAGATGTATATGCAATTTCATATGAGCCTAGGAAGGATGAAAGAATTGAAGGTAAACTTGGTATTGTTATTGATACCATTAAGGAGAATGGGATCATGTTTGTACCTTGA

mRNA sequence

ATGCATAGAGGAACTAGCAAAGTGATATCAGTGGCGACAACAAATGCAAAAGATCTTAGAAACAGTCTACCATCACTTACAGATCACAATGCATGTAGAGTAATAGGGAAGCTTATTGCAGAGAGATCAAAGGAAGCAGATGTATATGCAATTTCATATGAGCCTAGGAAGGATGAAAGAATTGAAGGTAAACTTGGTATTGTTATTGATACCATTAAGGAGAATGGGATCATGTTTGTACCTTGA

Coding sequence (CDS)

ATGCATAGAGGAACTAGCAAAGTGATATCAGTGGCGACAACAAATGCAAAAGATCTTAGAAACAGTCTACCATCACTTACAGATCACAATGCATGTAGAGTAATAGGGAAGCTTATTGCAGAGAGATCAAAGGAAGCAGATGTATATGCAATTTCATATGAGCCTAGGAAGGATGAAAGAATTGAAGGTAAACTTGGTATTGTTATTGATACCATTAAGGAGAATGGGATCATGTTTGTACCTTGA

Protein sequence

MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERIEGKLGIVIDTIKENGIMFVP

Homology

[Close]

BLAST of HG10005901 vs. NCBI nr
Match: XP_022993255.1 (uncharacterized protein LOC111489327 [Cucurbita maxima])

HSP 1 Score: 160.6 bits (405), Expect = 5.6e-36
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1   MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDER 60
           MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYA+SYEPRKDER
Sbjct: 116 MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDER 175

Query: 61  IEGKLGIVIDTIKENGIMFVP 82
           IEGKLGIVIDTIKENGIMFVP
Sbjct: 176 IEGKLGIVIDTIKENGIMFVP 196

[Close]

BLAST of HG10005901 vs. NCBI nr
Match: XP_023521951.1 (uncharacterized protein LOC111785799 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 160.6 bits (405), Expect = 5.6e-36
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1   MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDER 60
           MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYA+SYEPRKDER
Sbjct: 116 MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDER 175

Query: 61  IEGKLGIVIDTIKENGIMFVP 82
           IEGKLGIVIDTIKENGIMFVP
Sbjct: 176 IEGKLGIVIDTIKENGIMFVP 196

[Close]

BLAST of HG10005901 vs. NCBI nr
Match: XP_022990182.1 (uncharacterized protein LOC111487153 [Cucurbita maxima])

HSP 1 Score: 160.6 bits (405), Expect = 5.6e-36
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1   MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDER 60
           MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYA+SYEPRKDER
Sbjct: 115 MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDER 174

Query: 61  IEGKLGIVIDTIKENGIMFVP 82
           IEGKLGIVIDTIKENGIMFVP
Sbjct: 175 IEGKLGIVIDTIKENGIMFVP 195

[Close]

BLAST of HG10005901 vs. NCBI nr
Match: XP_008441144.1 (PREDICTED: 50S ribosomal protein L18-like [Cucumis melo])

HSP 1 Score: 160.6 bits (405), Expect = 5.6e-36
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1   MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDER 60
           MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDE+
Sbjct: 110 MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDEK 169

Query: 61  IEGKLGIVIDTIKENGIMFVP 82
           IEGKLGIVIDTIKENGIMFVP
Sbjct: 170 IEGKLGIVIDTIKENGIMFVP 190

[Close]

BLAST of HG10005901 vs. NCBI nr
Match: XP_022152485.1 (uncharacterized protein LOC111020202 [Momordica charantia])

HSP 1 Score: 160.2 bits (404), Expect = 7.4e-36
Identity = 79/81 (97.53%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1   MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDER 60
           MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYA+SYEPRKDER
Sbjct: 122 MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDER 181

Query: 61  IEGKLGIVIDTIKENGIMFVP 82
           +EGKLGIVIDTIKENGIMFVP
Sbjct: 182 VEGKLGIVIDTIKENGIMFVP 202

[Close]

BLAST of HG10005901 vs. ExPASy Swiss-Prot
Match: Q5P316 (50S ribosomal protein L18 OS=Aromatoleum aromaticum (strain EbN1) OX=76114 GN=rplR PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.1e-05
Identity = 26/74 (35.14%), Postives = 48/74 (64.86%), Query Frame = 0


Query: 6   SKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERIEGKL 65
           S+V++ A+T   D+R+ LP+  +  A +V+GKLIAER+K A V A++++ R   +  G++
Sbjct: 45  SRVLAAASTVEADVRSQLPNGGNKQAAQVVGKLIAERAKAAGVEAVAFD-RAGFQYHGRV 104

Query: 66  GIVIDTIKENGIMF 80
             + +  +E G+ F
Sbjct: 105 KALAEAAREGGLKF 117

[Close]

BLAST of HG10005901 vs. ExPASy Swiss-Prot
Match: Q8PNR1 (50S ribosomal protein L18 OS=Xanthomonas axonopodis pv. citri (strain 306) OX=190486 GN=rplR PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 7.0e-05
Identity = 25/74 (33.78%), Postives = 44/74 (59.46%), Query Frame = 0


Query: 6   SKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERIEGKL 65
           SKVI+ A T   D+++ L +  + +A   +GKLIAER+K A +  ++++ R   R  G++
Sbjct: 47  SKVIAAANTLQADVKDGLKNGKNSDAAAKVGKLIAERAKAAGIEKVAFD-RSGYRYHGRI 106

Query: 66  GIVIDTIKENGIMF 80
             + D  +E G+ F
Sbjct: 107 KALADAAREGGLQF 119

[Close]

BLAST of HG10005901 vs. ExPASy Swiss-Prot
Match: Q3BWW7 (50S ribosomal protein L18 OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) OX=316273 GN=rplR PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 7.0e-05
Identity = 25/74 (33.78%), Postives = 44/74 (59.46%), Query Frame = 0


Query: 6   SKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERIEGKL 65
           SKVI+ A T   D+++ L +  + +A   +GKLIAER+K A +  ++++ R   R  G++
Sbjct: 47  SKVIAAANTLQADVKDGLKNGKNSDAAAKVGKLIAERAKAAGIEKVAFD-RSGYRYHGRI 106

Query: 66  GIVIDTIKENGIMF 80
             + D  +E G+ F
Sbjct: 107 KALADAAREGGLQF 119

[Close]

BLAST of HG10005901 vs. ExPASy Swiss-Prot
Match: B1XSR7 (50S ribosomal protein L18 OS=Polynucleobacter necessarius subsp. necessarius (strain STIR1) OX=452638 GN=rplR PE=3 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.2e-04
Identity = 24/74 (32.43%), Postives = 46/74 (62.16%), Query Frame = 0


Query: 6   SKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERIEGKL 65
           +KV++ A+T  KDLR ++ + +   A + IGKL+AER+ +A V  ++++ R   R  G++
Sbjct: 45  TKVVAAASTMEKDLRQAIKNGSYAEAAKQIGKLVAERAVKAGVVDVAFD-RSGHRYHGRI 104

Query: 66  GIVIDTIKENGIMF 80
             + +  +E G+ F
Sbjct: 105 KALAEAAREAGLKF 117

[Close]

BLAST of HG10005901 vs. ExPASy Swiss-Prot
Match: Q4URF5 (50S ribosomal protein L18 OS=Xanthomonas campestris pv. campestris (strain 8004) OX=314565 GN=rplR PE=3 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.2e-04
Identity = 25/74 (33.78%), Postives = 44/74 (59.46%), Query Frame = 0


Query: 6   SKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERIEGKL 65
           SKVI+ A T   D+++ L +  + +A   +GKLIAER+K A +  ++++ R   R  G++
Sbjct: 47  SKVIAAANTLQADVKDGLKNGKNSDAAVKVGKLIAERAKAAGIEKVAFD-RSGYRYHGRI 106

Query: 66  GIVIDTIKENGIMF 80
             + D  +E G+ F
Sbjct: 107 KALADAAREGGLQF 119

[Close]

BLAST of HG10005901 vs. ExPASy TrEMBL
Match: A0A6J1JHY7 (uncharacterized protein LOC111487153 OS=Cucurbita maxima OX=3661 GN=LOC111487153 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.7e-36
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1   MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDER 60
           MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYA+SYEPRKDER
Sbjct: 115 MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDER 174

Query: 61  IEGKLGIVIDTIKENGIMFVP 82
           IEGKLGIVIDTIKENGIMFVP
Sbjct: 175 IEGKLGIVIDTIKENGIMFVP 195

[Close]

BLAST of HG10005901 vs. ExPASy TrEMBL
Match: A0A6J1JY30 (uncharacterized protein LOC111489327 OS=Cucurbita maxima OX=3661 GN=LOC111489327 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.7e-36
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1   MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDER 60
           MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYA+SYEPRKDER
Sbjct: 116 MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDER 175

Query: 61  IEGKLGIVIDTIKENGIMFVP 82
           IEGKLGIVIDTIKENGIMFVP
Sbjct: 176 IEGKLGIVIDTIKENGIMFVP 196

[Close]

BLAST of HG10005901 vs. ExPASy TrEMBL
Match: A0A1S3B2Q8 (50S ribosomal protein L18-like OS=Cucumis melo OX=3656 GN=LOC103485371 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.7e-36
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1   MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDER 60
           MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDE+
Sbjct: 110 MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDEK 169

Query: 61  IEGKLGIVIDTIKENGIMFVP 82
           IEGKLGIVIDTIKENGIMFVP
Sbjct: 170 IEGKLGIVIDTIKENGIMFVP 190

[Close]

BLAST of HG10005901 vs. ExPASy TrEMBL
Match: A0A6J1DE20 (uncharacterized protein LOC111020202 OS=Momordica charantia OX=3673 GN=LOC111020202 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.6e-36
Identity = 79/81 (97.53%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1   MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDER 60
           MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYA+SYEPRKDER
Sbjct: 122 MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDER 181

Query: 61  IEGKLGIVIDTIKENGIMFVP 82
           +EGKLGIVIDTIKENGIMFVP
Sbjct: 182 VEGKLGIVIDTIKENGIMFVP 202

[Close]

BLAST of HG10005901 vs. ExPASy TrEMBL
Match: A0A6J1FFK7 (uncharacterized protein LOC111445279 OS=Cucurbita moschata OX=3662 GN=LOC111445279 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 6.1e-36
Identity = 79/81 (97.53%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1   MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDER 60
           MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYA+SYEPRKDER
Sbjct: 118 MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDER 177

Query: 61  IEGKLGIVIDTIKENGIMFVP 82
           I+GKLGIVIDTIKENGIMFVP
Sbjct: 178 IDGKLGIVIDTIKENGIMFVP 198

[Close]

BLAST of HG10005901 vs. TAIR 10
Match: AT3G20230.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 135.6 bits (340), Expect = 1.8e-32
Identity = 66/81 (81.48%), Postives = 75/81 (92.59%), Query Frame = 0


Query: 1   MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDER 60
           MHR TSKVISVATTNA+D+R ++PSL D+ ACR+IGKLIAERS EADVYA+SYEPRK ER
Sbjct: 107 MHRPTSKVISVATTNARDIRTNIPSLVDNEACRLIGKLIAERSMEADVYAVSYEPRKGER 166

Query: 61  IEGKLGIVIDTIKENGIMFVP 82
           IEGKLGIVIDTIKE+GI+FVP
Sbjct: 167 IEGKLGIVIDTIKEHGIIFVP 187

[Close]

BLAST of HG10005901 vs. TAIR 10
Match: AT1G08845.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 74.7 bits (182), Expect = 3.8e-14
Identity = 35/76 (46.05%), Postives = 53/76 (69.74%), Query Frame = 0


Query: 2   HRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERI 61
           HR T + ++VA TN+KD++  L S  D  AC  IG++++ER+KEADVY  SY PR  ++ 
Sbjct: 107 HRVTCRQVAVAGTNSKDVKAVLRSRCDIPACMSIGRILSERAKEADVYTASYTPRDQDKF 166

Query: 62  EGKLGIVIDTIKENGI 78
           EGK+  V+ ++ +NGI
Sbjct: 167 EGKIRAVVQSLIDNGI 182

[Close]

BLAST of HG10005901 vs. TAIR 10
Match: AT1G08845.2 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 74.7 bits (182), Expect = 3.8e-14
Identity = 35/76 (46.05%), Postives = 53/76 (69.74%), Query Frame = 0


Query: 2   HRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERI 61
           HR T + ++VA TN+KD++  L S  D  AC  IG++++ER+KEADVY  SY PR  ++ 
Sbjct: 152 HRVTCRQVAVAGTNSKDVKAVLRSRCDIPACMSIGRILSERAKEADVYTASYTPRDQDKF 211

Query: 62  EGKLGIVIDTIKENGI 78
           EGK+  V+ ++ +NGI
Sbjct: 212 EGKIRAVVQSLIDNGI 227

[Close]

BLAST of HG10005901 vs. TAIR 10
Match: AT3G22450.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 70.1 bits (170), Expect = 9.3e-13
Identity = 32/77 (41.56%), Postives = 54/77 (70.13%), Query Frame = 0


Query: 1   MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDER 60
           +HR TSKV++VA + +KD++  L S  +  AC  +G ++A+RS E D++ + Y PRK ++
Sbjct: 214 IHRVTSKVVTVAHSISKDMKFDLGSRRNVAACAAVGAVLAQRSLEDDIHDVIYTPRKGDK 273

Query: 61  IEGKLGIVIDTIKENGI 78
           IEGKL +V+  + +NG+
Sbjct: 274 IEGKLQVVLQALIDNGV 290

[Close]

BLAST of HG10005901 vs. TAIR 10
Match: AT5G27820.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 50.1 bits (118), Expect = 1.0e-06
Identity = 25/77 (32.47%), Postives = 45/77 (58.44%), Query Frame = 0


Query: 1   MHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDER 60
           +H  T+ V   A++  K LR ++    D  A   IGK++ ER    D+ A++ + +K++R
Sbjct: 35  IHSPTATVACSASSQEKALRETMDITRDVAAASKIGKILGERLLMKDIPAVTIQMKKEQR 94

Query: 61  IEGKLGIVIDTIKENGI 78
             GK+  VID+++E G+
Sbjct: 95  YHGKVKAVIDSVREAGV 111

The following BLAST results are available for this feature:

BLAST of HG10005901 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022993255.1	5.6e-36	98.77	uncharacterized protein LOC111489327 [Cucurbita maxima]	[more]
XP_023521951.1	5.6e-36	98.77	uncharacterized protein LOC111785799 [Cucurbita pepo subsp. pepo]	[more]
XP_022990182.1	5.6e-36	98.77	uncharacterized protein LOC111487153 [Cucurbita maxima]	[more]
XP_008441144.1	5.6e-36	98.77	PREDICTED: 50S ribosomal protein L18-like [Cucumis melo]	[more]
XP_022152485.1	7.4e-36	97.53	uncharacterized protein LOC111020202 [Momordica charantia]	[more]

BLAST of HG10005901 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5P316	1.1e-05	35.14	50S ribosomal protein L18 OS=Aromatoleum aromaticum (strain EbN1) OX=76114 GN=rp...	[more]
Q8PNR1	7.0e-05	33.78	50S ribosomal protein L18 OS=Xanthomonas axonopodis pv. citri (strain 306) OX=19...	[more]
Q3BWW7	7.0e-05	33.78	50S ribosomal protein L18 OS=Xanthomonas campestris pv. vesicatoria (strain 85-1...	[more]
B1XSR7	1.2e-04	32.43	50S ribosomal protein L18 OS=Polynucleobacter necessarius subsp. necessarius (st...	[more]
Q4URF5	1.2e-04	33.78	50S ribosomal protein L18 OS=Xanthomonas campestris pv. campestris (strain 8004)...	[more]

BLAST of HG10005901 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JHY7	2.7e-36	98.77	uncharacterized protein LOC111487153 OS=Cucurbita maxima OX=3661 GN=LOC111487153...	[more]
A0A6J1JY30	2.7e-36	98.77	uncharacterized protein LOC111489327 OS=Cucurbita maxima OX=3661 GN=LOC111489327...	[more]
A0A1S3B2Q8	2.7e-36	98.77	50S ribosomal protein L18-like OS=Cucumis melo OX=3656 GN=LOC103485371 PE=4 SV=1	[more]
A0A6J1DE20	3.6e-36	97.53	uncharacterized protein LOC111020202 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1FFK7	6.1e-36	97.53	uncharacterized protein LOC111445279 OS=Cucurbita moschata OX=3662 GN=LOC1114452...	[more]

BLAST of HG10005901 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20230.1	1.8e-32	81.48	Ribosomal L18p/L5e family protein	[more]
AT1G08845.1	3.8e-14	46.05	Ribosomal L18p/L5e family protein	[more]
AT1G08845.2	3.8e-14	46.05	Ribosomal L18p/L5e family protein	[more]
AT3G22450.1	9.3e-13	41.56	Ribosomal L18p/L5e family protein	[more]
AT5G27820.1	1.0e-06	32.47	Ribosomal L18p/L5e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036967	Ribosomal protein S11 superfamily	GENE3D	3.30.420.80	Ribosomal protein S11	coord: 1..80 e-value: 1.2E-11 score: 46.7
None	No IPR available	PANTHER	PTHR12899:SF16	OS02G0689700 PROTEIN	coord: 1..79
None	No IPR available	SUPERFAMILY	53137	Translational machinery components	coord: 2..77
IPR005484	Ribosomal protein L18	PANTHER	PTHR12899	39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL	coord: 1..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005901.1	HG10005901.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome