HG10005870 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAGGATCCGTTGCTTCTTGGATATCAGTATTGGAGGTGATCTCGAGGGTAGAATTGTGGTGGAGCTTTACGACGATGTAGTGCCTAAAACAGCTGAGAATTTCAGGGCTCTTTGCACTGGCGAGAGGGGCATTGGTCCACATACTGGCGTTCCCCTTCATTTCAAGGTCATTGCTCTGTATATCTATGTTGTTTTGTACTTTGTATATGCATAATACAAACTGGGTTTCTTTGTATTTATGTGTATACCCTCTTTTTTTCCTTCCCTGTTTGGTATGACTTGTTTATTTTAGTAAGACGTTAGATTTCCTTTCCTTTATGGGTGTCAGTGGAATGATGATGTCTGTGTCCTTGACCAGTAAATATAACAGTGGTGTTCTTCTACTTACTTGATGATGTTTTAGCTGTTATTGCTTGGTTGTTTCGATGATGCTAGCAATTTGTTCCTTGAGGAGTTGGATTGATTTTATTTTTATATAAATATGGGTCTTCAAAATTTTGGGCTTTGTTTCTCTTGTTTGAAACCTGAGGATTTGGAACTTGTTTGTTTAGAATTAATTACCCTGAAGTGGGTATGTGGATGTTTATATGTTTATTTTGAATTATGAATTGTTCAGGGGTCATGTTTCCACCGTGTCATAAAAGGATTCATGGTACAAGGTGGAGATATTTCTGCTGGAGATGGTACTGGTGGAGAGTCTATATATGGCATGAAATTTGATGACGAAAATTTCGAGGTGAAACATGAAAGGAAAGGAATGTTGTCTATGGCTAATTCTGGTCCCAACACAAATGGTTCCCAATTTTTTATCACAACTACTCGCACTCCTCATTTAGATGGGAAACATGTAGTGTTTGGGAAGGTTCTGAAAGGAATGGGTGTTGTTCGTTCAATTGAGCATGTTACAACTGGTGACAATGCCCGCCCTACTGCTGATGTCATTATTGCGGATTGTGGAGAAATTCCTGAGGGAGCAGATGATGGAATTTCAAACTTTTTCAATGATGGGGATACTTTTCCTGATTGGCCAGCTGACCTAGAACAGAGCTCTGATGAACTTGAATGGTGGGTGAATGCAGTTGATTCTGTGAAGGTTTTTGGCAATGAGCATTACAAGGTATTGACATTAGATTCCATCTGACATGAATGTTTTTTGTTTATTTTGATGAAAGCTTTTTCTGCTGTATGAAATTATGCCCTCTGTACTGATGAGAAAGAAAGAGGAACCTTGGGTTCAGATTTTCCGTTGGCTTATCATTAAAACCTAGTGATAGATTTCTTTTTACTCCAATAACTTCTCCTTACAGAAGCAAGACTACAAGATGGCTCTCAGAAAGTACCGGAAGGCTTTACGCTACCTCGATATCTGCTGGGAAAAAGAAGGAATCGATGAAGGTACATCTTTCCTTTGACATAAAGTGGTACTTGGTAGTATCATGAAACTATATGATGAAAATATTTTACAATGAATATCTTAAGTATAAATGACTGCACTGACTTCGGCCTCCCGTCAATTTCTCCTCGTTTTTTTCCTTTGAGTCTGCAGAGAAGAGTTCATATCTTAGAAAAACCAAATCACAGATATTCACAAACAGTTCGGTAAGTGTCCTAGTTAGTGTCTTTCATTTTCTTTGTTTAGTTATTCGTGGAATTTTAGTATTTTTAATATATGTTGGTAAACTTATTTGACAGTCGTTTGGGAGGTGGTAATCGATCGACACATCTTATCCCCATCTCCACCATCTTTTCCATTTATCTTTTGTTCTTTTACACTTTTACCCTTTTCTAGGCCCCAGCATCAATTCAAATTTGCTTCTCCTTCCAAACATTTCGCGAACAATAGTAATTATGTTTCTCAATCCAAAATAATTGAAGTGAATGTAATACTTCAAAACCTTATTCCCATTTTTACAATTGTTGTTTGGACAGATTGTCATTACAATTCTTCATCAAACTTATCCATTTTTTGTAAAAGTTGCCTATGACTGAATGAAAAAGAAAACAGTTTGCACATGCAAACACACCAACAAATTAAAGCCTTCTTGGTTTTGCATAACATTAAAACACAGAGATAATTTGTTATAAGAAATTGAGCTTTAATCAAGAAACAGTGAGGTAAATGAGCAACTTCAAACTTTTTTCATGAGTAAAGATTGCTAAAATACATAATGTGGTTTGATGTGTAGGACCTAAAACAATACTAAAATCATGTAAATTTGCTTGAATAGAAAACTTTAAACTGTGGTAGGAATCTTTCAATGTTTTTACAATAGAATATTCTGGATCTAACAGAATTTGGCATATCTAGTTTCGTGAATTACAAAATGTACATAAAAGTCCCTGAAATAGGAAAGTTGCTAATTTAGACAAATGCTAAATGGTTGTGGTGGAACCCTTAAGGAAAGCCTAGTTCACAAAGGGGAGATGATTTGGTGAGAACGGTCTAGCTACAATGGGCATATATATTTCAGATTTCTTGCAATGATGTATCTCTCTTTCAGCTCTATGATTATATGTTCTGGTTCACTGTGCACATTATCTTTTGAAGAATTATTTAGTTGGAGTGCCAACCATATTCTTTCATTGTATGGATGCTGTCCTTGCTTGCAATGGTTGATTCATTTTCATTAATTACCACTTAAGTAACAAGTGATTTTATTATTCCTTTTGAATTTTTCAGCAGATTAAACTTTACTATAGTCAGTCTAATGATCACCTGGTTGTTTTTTTTATGTAGGCTTGTAAATTGAAGTTAGGGGATCTAAAAGGAGCATTGTTAGACACTGATTTTGCAATGCGTGATGGAGACAACAATGTTAAGGCTTTGTTTCGCCAAGGTCAGGTTGGTATTTCTTGTGGCAAAGATGGCGATGACTCAAAGGGTTGGATGGAGCTCTGCTTTCCTGGATAATATGTGATTCTTTGTCATTTTCTCTTTAAAATTTCTAGAATTTGTGTTAATTCCCAGTTTTTCTTTTCAATTTTATCATACATCATAAGTCCATGATTTCTTTTATAAAATAACTTTATAACTTTACATAAAAGAAATGGACAGTGGACAACCACAATGGTTTGAAAATTTGGGAGAATGGGTTTTTATCCCATGGTGCATTTGGATATTAAAAATTTACGAGTTTCCTAACAACTAAATGGATCTGACTCGGACTGTTGCTTCATGAGATTAGTTAAAGTGTTCATAAGTATGCTTATACATTCATTGATTTAAAAACAATGCTAAAGAAATGAGCTTATATGTAAGCTACTACAAGTCAATTTATTTGCAAGTTATAATCATTTTTTCTCTTTTGCTTCATGCTTTCCCATTCTTTGTATTCATGATTCTGTATGTTAGCCTCCTTTTACATGCTTGTTTGCAACCATTTGCAAATGTACCCCCTATTGCTGTAGCTTACTGATTATTGCAATCAATTCATATCCAGGCATACATGGCTCTTAATGACATTGATTCTGCTGTCGAAAGTTTCAAGAAGGCATCGGATTTGGAGCCAAATGATGGTAATAGTTTTTTTATTAGGCTGCTGTTGTACTTATTTCAAATATTTTATTCTATATATTTAGAAAACATCTTGATATATTTCATGATGATTTAGAAGCTAGATGTTTAGAATTTTAAAACTAGCCACCTCATATCTCACTAGAGTGGATCGGTGTTCATTTGCTTCTCTGATGTCTGAAATTGGAAGTGTCATTTTCTTATTAATCGATGTTGGTTGGAGAAAATCAGAAAATGAAGTAACAGCGCTGGAAAATTCTGGGAGAGAACCCAACTTAAAATCTAGATTGGGTGGATATTTCTTCCTATTATTATTGGAGTATTGCCATGAAATGTTGTCTAGATCACTACATGCCCATTTTCTTGGTCTTGAGAAGGTGCTGACAAAACATAAGATATATAGAGAAACCCACTGAAGTAGGAGATTGAAGAAGAAGAAGAAGATCTTCCTTTAGAATTTTGGACAGAAGAACGAAAATCGAGACCTAGAATAGTGTAGCAATCTAATTTTTTGTTCTAGATTGCTGCTACACTATTTTAGGTCTCTAATTTTTATCTGAAATTCTAAAGAATTTCTACTGCAGTTTTGCAGTTTTGAAATATTGATGAAAGATCAAGTATTGTAACTTTTGAAAGAATAGAGGTATTTTTTGAAACAAAATACAAAATTCGTGGCTATTTCATATCATTTAACCTTTTATTATAGGAAAGCCTTCTATCTTGAAAGTAAAAAAAAAGAAAGAAAGAAAAAAAAGTAAGATAACTGCACATCTTTGTTTTCTAGATATGAGTTTTCTTGTTGTTCCTACTGATGTTTATACTTAACCATTGGAAGAGTGCAAGACTGTACTGCTTTGTGCTAGCCGTTTATTTATCTCACTCCATAGCTGTTCATATTCAACTTGTGTGATGTATATCAATTCCTCTTTTGTGTCTGGAACTTGCTTATCACTTTCAACTCTTTCGAGTTTCAGCTGTCATAAAGAAAGAGCTTGCTGCCGCGAGGAAAAAGGTAATTAAAGTAAATTCTTTGCACCAAGATGACACGTATCGTTAACTGATCGATTATGGTATTAATGCAGATTGCTGACAGACGTAATCAAGAAAGAAAGGCATATAGCAAGATGTTCCAGTAGCCCCTGATTGGTATGTTGCGGGGTTCACATTATTGTATGGAACTGATCTTTGCTTGTTCATTCTGTCATGTTCCATGGCTGATAGTCTTTTGTTTTTTGTTTTTTTTTTTTTTTTTCCATGTTTAATCAAGGTTTATGGAGTAGAGAGCTAGATTCCATACATGATGAGTTTCACCTGCACGAAATCGATCGATATTTGATGACTGGGGTTGGTACTGCACTGGTGCTTTTAACTGGAAGATGTTAA ATGGGGAGGATCCGTTGCTTCTTGGATATCAGTATTGGAGGTGATCTCGAGGGTAGAATTGTGGTGGAGCTTTACGACGATGTAGTGCCTAAAACAGCTGAGAATTTCAGGGCTCTTTGCACTGGCGAGAGGGGCATTGGTCCACATACTGGCGTTCCCCTTCATTTCAAGGGGTCATGTTTCCACCGTGTCATAAAAGGATTCATGGTACAAGGTGGAGATATTTCTGCTGGAGATGGTACTGGTGGAGAGTCTATATATGGCATGAAATTTGATGACGAAAATTTCGAGGTGAAACATGAAAGGAAAGGAATGTTGTCTATGGCTAATTCTGGTCCCAACACAAATGGTTCCCAATTTTTTATCACAACTACTCGCACTCCTCATTTAGATGGGAAACATGTAGTGTTTGGGAAGGTTCTGAAAGGAATGGGTGTTGTTCGTTCAATTGAGCATGTTACAACTGGTGACAATGCCCGCCCTACTGCTGATGTCATTATTGCGGATTGTGGAGAAATTCCTGAGGGAGCAGATGATGGAATTTCAAACTTTTTCAATGATGGGGATACTTTTCCTGATTGGCCAGCTGACCTAGAACAGAGCTCTGATGAACTTGAATGGTGGGTGAATGCAGTTGATTCTGTGAAGGTTTTTGGCAATGAGCATTACAAGAAGCAAGACTACAAGATGGCTCTCAGAAAGTACCGGAAGGCTTTACGCTACCTCGATATCTGCTGGGAAAAAGAAGGAATCGATGAAGAGAAGAGTTCATATCTTAGAAAAACCAAATCACAGATATTCACAAACAGTTCGGCTTGTAAATTGAAGTTAGGGGATCTAAAAGGAGCATTGTTAGACACTGATTTTGCAATGCGTGATGGAGACAACAATGTTAAGGCTTTGTTTCGCCAAGGTCAGGCATACATGGCTCTTAATGACATTGATTCTGCTGTCGAAAGTTTCAAGAAGGCATCGGATTTGGAGCCAAATGATGGTTTATGGAGTAGAGAGCTAGATTCCATACATGATGAGTTTCACCTGCACGAAATCGATCGATATTTGATGACTGGGGTTGGTACTGCACTGGTGCTTTTAACTGGAAGATGTTAA ATGGGGAGGATCCGTTGCTTCTTGGATATCAGTATTGGAGGTGATCTCGAGGGTAGAATTGTGGTGGAGCTTTACGACGATGTAGTGCCTAAAACAGCTGAGAATTTCAGGGCTCTTTGCACTGGCGAGAGGGGCATTGGTCCACATACTGGCGTTCCCCTTCATTTCAAGGGGTCATGTTTCCACCGTGTCATAAAAGGATTCATGGTACAAGGTGGAGATATTTCTGCTGGAGATGGTACTGGTGGAGAGTCTATATATGGCATGAAATTTGATGACGAAAATTTCGAGGTGAAACATGAAAGGAAAGGAATGTTGTCTATGGCTAATTCTGGTCCCAACACAAATGGTTCCCAATTTTTTATCACAACTACTCGCACTCCTCATTTAGATGGGAAACATGTAGTGTTTGGGAAGGTTCTGAAAGGAATGGGTGTTGTTCGTTCAATTGAGCATGTTACAACTGGTGACAATGCCCGCCCTACTGCTGATGTCATTATTGCGGATTGTGGAGAAATTCCTGAGGGAGCAGATGATGGAATTTCAAACTTTTTCAATGATGGGGATACTTTTCCTGATTGGCCAGCTGACCTAGAACAGAGCTCTGATGAACTTGAATGGTGGGTGAATGCAGTTGATTCTGTGAAGGTTTTTGGCAATGAGCATTACAAGAAGCAAGACTACAAGATGGCTCTCAGAAAGTACCGGAAGGCTTTACGCTACCTCGATATCTGCTGGGAAAAAGAAGGAATCGATGAAGAGAAGAGTTCATATCTTAGAAAAACCAAATCACAGATATTCACAAACAGTTCGGCTTGTAAATTGAAGTTAGGGGATCTAAAAGGAGCATTGTTAGACACTGATTTTGCAATGCGTGATGGAGACAACAATGTTAAGGCTTTGTTTCGCCAAGGTCAGGCATACATGGCTCTTAATGACATTGATTCTGCTGTCGAAAGTTTCAAGAAGGCATCGGATTTGGAGCCAAATGATGGTTTATGGAGTAGAGAGCTAGATTCCATACATGATGAGTTTCACCTGCACGAAATCGATCGATATTTGATGACTGGGGTTGGTACTGCACTGGTGCTTTTAACTGGAAGATGTTAA MGRIRCFLDISIGGDLEGRIVVELYDDVVPKTAENFRALCTGERGIGPHTGVPLHFKGSCFHRVIKGFMVQGGDISAGDGTGGESIYGMKFDDENFEVKHERKGMLSMANSGPNTNGSQFFITTTRTPHLDGKHVVFGKVLKGMGVVRSIEHVTTGDNARPTADVIIADCGEIPEGADDGISNFFNDGDTFPDWPADLEQSSDELEWWVNAVDSVKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEEKSSYLRKTKSQIFTNSSACKLKLGDLKGALLDTDFAMRDGDNNVKALFRQGQAYMALNDIDSAVESFKKASDLEPNDGLWSRELDSIHDEFHLHEIDRYLMTGVGTALVLLTGRC Homology
BLAST of HG10005870 vs. NCBI nr
Match: XP_038887921.1 (peptidyl-prolyl cis-trans isomerase CYP40-like [Benincasa hispida] >XP_038887922.1 peptidyl-prolyl cis-trans isomerase CYP40-like [Benincasa hispida] >XP_038887923.1 peptidyl-prolyl cis-trans isomerase CYP40-like [Benincasa hispida]) HSP 1 Score: 671.4 bits (1731), Expect = 4.5e-189 Identity = 325/338 (96.15%), Postives = 329/338 (97.34%), Query Frame = 0
BLAST of HG10005870 vs. NCBI nr
Match: XP_022927819.1 (peptidyl-prolyl cis-trans isomerase CYP40-like [Cucurbita moschata] >XP_023530109.1 peptidyl-prolyl cis-trans isomerase CYP40-like [Cucurbita pepo subsp. pepo] >KAG6588647.1 Peptidyl-prolyl cis-trans isomerase CYP40, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 662.9 bits (1709), Expect = 1.6e-186 Identity = 320/338 (94.67%), Postives = 327/338 (96.75%), Query Frame = 0
BLAST of HG10005870 vs. NCBI nr
Match: XP_004136993.1 (peptidyl-prolyl cis-trans isomerase CYP40 [Cucumis sativus] >KGN43950.1 hypothetical protein Csa_017310 [Cucumis sativus]) HSP 1 Score: 662.1 bits (1707), Expect = 2.7e-186 Identity = 320/338 (94.67%), Postives = 329/338 (97.34%), Query Frame = 0
BLAST of HG10005870 vs. NCBI nr
Match: XP_008454915.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP40-like [Cucumis melo] >KAA0031281.1 peptidyl-prolyl cis-trans isomerase CYP40-like [Cucumis melo var. makuwa] >TYK06733.1 peptidyl-prolyl cis-trans isomerase CYP40-like [Cucumis melo var. makuwa]) HSP 1 Score: 660.6 bits (1703), Expect = 7.9e-186 Identity = 318/338 (94.08%), Postives = 330/338 (97.63%), Query Frame = 0
BLAST of HG10005870 vs. NCBI nr
Match: XP_022988828.1 (peptidyl-prolyl cis-trans isomerase CYP40-like [Cucurbita maxima]) HSP 1 Score: 658.3 bits (1697), Expect = 3.9e-185 Identity = 317/338 (93.79%), Postives = 325/338 (96.15%), Query Frame = 0
BLAST of HG10005870 vs. ExPASy Swiss-Prot
Match: Q9C566 (Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabidopsis thaliana OX=3702 GN=CYP40 PE=2 SV=1) HSP 1 Score: 566.2 bits (1458), Expect = 2.7e-160 Identity = 267/341 (78.30%), Postives = 300/341 (87.98%), Query Frame = 0
BLAST of HG10005870 vs. ExPASy Swiss-Prot
Match: Q6DGG0 (Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3) HSP 1 Score: 330.5 bits (846), Expect = 2.5e-89 Identity = 168/334 (50.30%), Postives = 224/334 (67.07%), Query Frame = 0
BLAST of HG10005870 vs. ExPASy Swiss-Prot
Match: Q9CR16 (Peptidyl-prolyl cis-trans isomerase D OS=Mus musculus OX=10090 GN=Ppid PE=1 SV=3) HSP 1 Score: 328.9 bits (842), Expect = 7.1e-89 Identity = 167/334 (50.00%), Postives = 224/334 (67.07%), Query Frame = 0
BLAST of HG10005870 vs. ExPASy Swiss-Prot
Match: P26882 (Peptidyl-prolyl cis-trans isomerase D OS=Bos taurus OX=9913 GN=PPID PE=1 SV=6) HSP 1 Score: 326.2 bits (835), Expect = 4.6e-88 Identity = 164/334 (49.10%), Postives = 222/334 (66.47%), Query Frame = 0
BLAST of HG10005870 vs. ExPASy Swiss-Prot
Match: Q08752 (Peptidyl-prolyl cis-trans isomerase D OS=Homo sapiens OX=9606 GN=PPID PE=1 SV=3) HSP 1 Score: 321.6 bits (823), Expect = 1.1e-86 Identity = 165/334 (49.40%), Postives = 220/334 (65.87%), Query Frame = 0
BLAST of HG10005870 vs. ExPASy TrEMBL
Match: A0A6J1EJ25 (peptidyl-prolyl cis-trans isomerase CYP40-like OS=Cucurbita moschata OX=3662 GN=LOC111434595 PE=4 SV=1) HSP 1 Score: 662.9 bits (1709), Expect = 7.7e-187 Identity = 320/338 (94.67%), Postives = 327/338 (96.75%), Query Frame = 0
BLAST of HG10005870 vs. ExPASy TrEMBL
Match: A0A0A0K2Q8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G074830 PE=4 SV=1) HSP 1 Score: 662.1 bits (1707), Expect = 1.3e-186 Identity = 320/338 (94.67%), Postives = 329/338 (97.34%), Query Frame = 0
BLAST of HG10005870 vs. ExPASy TrEMBL
Match: A0A5A7SNU9 (Peptidyl-prolyl cis-trans isomerase CYP40-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00340 PE=4 SV=1) HSP 1 Score: 660.6 bits (1703), Expect = 3.8e-186 Identity = 318/338 (94.08%), Postives = 330/338 (97.63%), Query Frame = 0
BLAST of HG10005870 vs. ExPASy TrEMBL
Match: A0A1S3BZN4 (peptidyl-prolyl cis-trans isomerase CYP40-like OS=Cucumis melo OX=3656 GN=LOC103495218 PE=4 SV=1) HSP 1 Score: 660.6 bits (1703), Expect = 3.8e-186 Identity = 318/338 (94.08%), Postives = 330/338 (97.63%), Query Frame = 0
BLAST of HG10005870 vs. ExPASy TrEMBL
Match: A0A6J1JNG4 (peptidyl-prolyl cis-trans isomerase CYP40-like OS=Cucurbita maxima OX=3661 GN=LOC111486058 PE=4 SV=1) HSP 1 Score: 658.3 bits (1697), Expect = 1.9e-185 Identity = 317/338 (93.79%), Postives = 325/338 (96.15%), Query Frame = 0
BLAST of HG10005870 vs. TAIR 10
Match: AT2G15790.1 (peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase ) HSP 1 Score: 566.2 bits (1458), Expect = 1.9e-161 Identity = 267/341 (78.30%), Postives = 300/341 (87.98%), Query Frame = 0
BLAST of HG10005870 vs. TAIR 10
Match: AT3G63400.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 243.4 bits (620), Expect = 2.8e-64 Identity = 118/166 (71.08%), Postives = 133/166 (80.12%), Query Frame = 0
BLAST of HG10005870 vs. TAIR 10
Match: AT3G63400.2 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 243.4 bits (620), Expect = 2.8e-64 Identity = 118/166 (71.08%), Postives = 133/166 (80.12%), Query Frame = 0
BLAST of HG10005870 vs. TAIR 10
Match: AT3G63400.3 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 243.4 bits (620), Expect = 2.8e-64 Identity = 118/166 (71.08%), Postives = 133/166 (80.12%), Query Frame = 0
BLAST of HG10005870 vs. TAIR 10
Match: AT2G21130.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 226.5 bits (576), Expect = 3.5e-59 Identity = 109/169 (64.50%), Postives = 134/169 (79.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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