HG10005852 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGCCCTTGAGGAGTTCGATCAGACTTTCATCCAACGCCCAGAGCACCGCCTCAAGCTTGCCATCTCCGAAGCTGACGGAATCCCCACCATCGACCTCTCTCCGATCTTCAACTCCCCCGGCTGCAATTTTCCCAACGATGTGGTCCGACAAATCGCCTCTGCTTCCAAGGAGTGGGGATTCTTTCTGGTGGTCAATCACGGCGTCCCTCCCGAGAAGCAGCGCCGGATAGAGGTCGCTGCCCGAGAGTTTTTCGGGCAGAGTTTGGAAGAGAAGAGGAAAGTGAGGAGAAACGAAGGGGTGGTGACTGGCTATTTTGATACGGAGCTGACCAAGAACGTAAGAGATTGGAAGGAGGTGTTTGATTTCATGGTGGCGAATCATCCTGATGACGACAAGTTGATTCATGTAGGTCTCACAGTCACTGTCCAATTGTTTAAACTTTAG ATGGGAGCCCTTGAGGAGTTCGATCAGACTTTCATCCAACGCCCAGAGCACCGCCTCAAGCTTGCCATCTCCGAAGCTGACGGAATCCCCACCATCGACCTCTCTCCGATCTTCAACTCCCCCGGCTGCAATTTTCCCAACGATGTGGTCCGACAAATCGCCTCTGCTTCCAAGGAGTGGGGATTCTTTCTGGTGGTCAATCACGGCGTCCCTCCCGAGAAGCAGCGCCGGATAGAGGTCGCTGCCCGAGAGTTTTTCGGGCAGAGTTTGGAAGAGAAGAGGAAAGTGAGGAGAAACGAAGGGGTGGTGACTGGCTATTTTGATACGGAGCTGACCAAGAACGTAAGAGATTGGAAGGAGGTGTTTGATTTCATGGTGGCGAATCATCCTGATGACGACAAGTTGATTCATGTAGGTCTCACAGTCACTGTCCAATTGTTTAAACTTTAG ATGGGAGCCCTTGAGGAGTTCGATCAGACTTTCATCCAACGCCCAGAGCACCGCCTCAAGCTTGCCATCTCCGAAGCTGACGGAATCCCCACCATCGACCTCTCTCCGATCTTCAACTCCCCCGGCTGCAATTTTCCCAACGATGTGGTCCGACAAATCGCCTCTGCTTCCAAGGAGTGGGGATTCTTTCTGGTGGTCAATCACGGCGTCCCTCCCGAGAAGCAGCGCCGGATAGAGGTCGCTGCCCGAGAGTTTTTCGGGCAGAGTTTGGAAGAGAAGAGGAAAGTGAGGAGAAACGAAGGGGTGGTGACTGGCTATTTTGATACGGAGCTGACCAAGAACGTAAGAGATTGGAAGGAGGTGTTTGATTTCATGGTGGCGAATCATCCTGATGACGACAAGTTGATTCATGTAGGTCTCACAGTCACTGTCCAATTGTTTAAACTTTAG MGALEEFDQTFIQRPEHRLKLAISEADGIPTIDLSPIFNSPGCNFPNDVVRQIASASKEWGFFLVVNHGVPPEKQRRIEVAAREFFGQSLEEKRKVRRNEGVVTGYFDTELTKNVRDWKEVFDFMVANHPDDDKLIHVGLTVTVQLFKL Homology
BLAST of HG10005852 vs. NCBI nr
Match: XP_038887395.1 (protein DMR6-LIKE OXYGENASE 2-like [Benincasa hispida]) HSP 1 Score: 240.4 bits (612), Expect = 1.0e-59 Identity = 117/145 (80.69%), Postives = 127/145 (87.59%), Query Frame = 0
BLAST of HG10005852 vs. NCBI nr
Match: KAG7011675.1 (putative 2-oxoglutarate-dependent dioxygenase, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 223.0 bits (567), Expect = 1.7e-54 Identity = 108/145 (74.48%), Postives = 123/145 (84.83%), Query Frame = 0
BLAST of HG10005852 vs. NCBI nr
Match: KAA0031270.1 (protein DMR6-LIKE OXYGENASE 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 220.7 bits (561), Expect = 8.4e-54 Identity = 110/144 (76.39%), Postives = 122/144 (84.72%), Query Frame = 0
BLAST of HG10005852 vs. NCBI nr
Match: XP_008454901.1 (PREDICTED: protein DMR6-LIKE OXYGENASE 2-like [Cucumis melo] >TYK06722.1 protein DMR6-LIKE OXYGENASE 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 220.7 bits (561), Expect = 8.4e-54 Identity = 110/144 (76.39%), Postives = 122/144 (84.72%), Query Frame = 0
BLAST of HG10005852 vs. NCBI nr
Match: KAA0031269.1 (protein DMR6-LIKE OXYGENASE 2-like [Cucumis melo var. makuwa] >TYK06721.1 protein DMR6-LIKE OXYGENASE 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 220.3 bits (560), Expect = 1.1e-53 Identity = 108/144 (75.00%), Postives = 123/144 (85.42%), Query Frame = 0
BLAST of HG10005852 vs. ExPASy Swiss-Prot
Match: A0A023GS29 (Bi-functional coumaroyl CoA and feruloyl CoA ortho-hydroxylase Diox2 OS=Ruta graveolens OX=37565 GN=DIOX2 PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.3e-09 Identity = 39/104 (37.50%), Postives = 54/104 (51.92%), Query Frame = 0
BLAST of HG10005852 vs. ExPASy Swiss-Prot
Match: O80449 (Jasmonate-induced oxygenase 4 OS=Arabidopsis thaliana OX=3702 GN=JOX4 PE=1 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 3.9e-09 Identity = 35/96 (36.46%), Postives = 51/96 (53.12%), Query Frame = 0
BLAST of HG10005852 vs. ExPASy Swiss-Prot
Match: Q9LHN8 (Feruloyl CoA ortho-hydroxylase 1 OS=Arabidopsis thaliana OX=3702 GN=F6'H1 PE=1 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 6.6e-09 Identity = 38/137 (27.74%), Postives = 65/137 (47.45%), Query Frame = 0
BLAST of HG10005852 vs. ExPASy Swiss-Prot
Match: O04395 (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana OX=3724 PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 6.6e-09 Identity = 32/78 (41.03%), Postives = 41/78 (52.56%), Query Frame = 0
BLAST of HG10005852 vs. ExPASy Swiss-Prot
Match: A0A023GS28 (Bi-functional coumaroyl CoA and feruloyl CoA ortho-hydroxylase Diox1 OS=Ruta graveolens OX=37565 GN=DIOX1 PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 8.6e-09 Identity = 38/104 (36.54%), Postives = 53/104 (50.96%), Query Frame = 0
BLAST of HG10005852 vs. ExPASy TrEMBL
Match: A0A5A7SKK1 (Protein DMR6-LIKE OXYGENASE 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G00230 PE=3 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 4.1e-54 Identity = 110/144 (76.39%), Postives = 122/144 (84.72%), Query Frame = 0
BLAST of HG10005852 vs. ExPASy TrEMBL
Match: A0A5D3C5Z7 (Protein DMR6-LIKE OXYGENASE 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00230 PE=3 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 4.1e-54 Identity = 110/144 (76.39%), Postives = 122/144 (84.72%), Query Frame = 0
BLAST of HG10005852 vs. ExPASy TrEMBL
Match: A0A1S3BZ66 (protein DMR6-LIKE OXYGENASE 2-like OS=Cucumis melo OX=3656 GN=LOC103495206 PE=3 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 4.1e-54 Identity = 110/144 (76.39%), Postives = 122/144 (84.72%), Query Frame = 0
BLAST of HG10005852 vs. ExPASy TrEMBL
Match: A0A5A7SPM0 (Protein DMR6-LIKE OXYGENASE 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00220 PE=3 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 5.3e-54 Identity = 108/144 (75.00%), Postives = 123/144 (85.42%), Query Frame = 0
BLAST of HG10005852 vs. ExPASy TrEMBL
Match: A0A1S3BZR3 (LOW QUALITY PROTEIN: protein DMR6-LIKE OXYGENASE 2-like OS=Cucumis melo OX=3656 GN=LOC103495207 PE=3 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 5.3e-54 Identity = 108/144 (75.00%), Postives = 123/144 (85.42%), Query Frame = 0
BLAST of HG10005852 vs. TAIR 10
Match: AT3G19000.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 117.9 bits (294), Expect = 7.2e-27 Identity = 60/127 (47.24%), Postives = 80/127 (62.99%), Query Frame = 0
BLAST of HG10005852 vs. TAIR 10
Match: AT3G19000.2 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 117.9 bits (294), Expect = 7.2e-27 Identity = 60/127 (47.24%), Postives = 80/127 (62.99%), Query Frame = 0
BLAST of HG10005852 vs. TAIR 10
Match: AT3G19010.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 105.9 bits (263), Expect = 2.8e-23 Identity = 53/122 (43.44%), Postives = 77/122 (63.11%), Query Frame = 0
BLAST of HG10005852 vs. TAIR 10
Match: AT3G19010.2 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 105.9 bits (263), Expect = 2.8e-23 Identity = 53/122 (43.44%), Postives = 77/122 (63.11%), Query Frame = 0
BLAST of HG10005852 vs. TAIR 10
Match: AT3G19010.3 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 105.9 bits (263), Expect = 2.8e-23 Identity = 53/122 (43.44%), Postives = 77/122 (63.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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