HG10005765 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10005765
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein RADIALIS-like 1
LocationChr07: 5687934 .. 5688179 (-)
RNA-Seq ExpressionHG10005765
SyntenyHG10005765
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCAATGTCAGCTCATGGTTCTGCAGGTCAATGGACTGCAAAGCAAAACAAAGCATTTGAAGAAGCTTTGGCAATGTATGATCAAGACACACCTGATAGATGGTTGAATGTTGCAAAGGCCATTGGTGGAAAAACTGAGGAGGAAGTTAAAAGGCATTACCAAGTTCTTGTGGAAGATGTTAAACATATTGAGTCTGGCAAAGTTCCTTTTCCTTACAGAAGTTCAAGAGCCAATAATTAG

mRNA sequence

ATGGCTTCAATGTCAGCTCATGGTTCTGCAGGTCAATGGACTGCAAAGCAAAACAAAGCATTTGAAGAAGCTTTGGCAATGTATGATCAAGACACACCTGATAGATGGTTGAATGTTGCAAAGGCCATTGGTGGAAAAACTGAGGAGGAAGTTAAAAGGCATTACCAAGTTCTTGTGGAAGATGTTAAACATATTGAGTCTGGCAAAGTTCCTTTTCCTTACAGAAGTTCAAGAGCCAATAATTAG

Coding sequence (CDS)

ATGGCTTCAATGTCAGCTCATGGTTCTGCAGGTCAATGGACTGCAAAGCAAAACAAAGCATTTGAAGAAGCTTTGGCAATGTATGATCAAGACACACCTGATAGATGGTTGAATGTTGCAAAGGCCATTGGTGGAAAAACTGAGGAGGAAGTTAAAAGGCATTACCAAGTTCTTGTGGAAGATGTTAAACATATTGAGTCTGGCAAAGTTCCTTTTCCTTACAGAAGTTCAAGAGCCAATAATTAG

Protein sequence

MASMSAHGSAGQWTAKQNKAFEEALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQVLVEDVKHIESGKVPFPYRSSRANN
Homology
[Close]
BLAST of HG10005765 vs. NCBI nr
Match: XP_022952073.1 (protein RADIALIS-like 1 [Cucurbita moschata] >XP_022972518.1 protein RADIALIS-like 1 [Cucurbita maxima] >XP_023554705.1 protein RADIALIS-like 1 [Cucurbita pepo subsp. pepo] >KAG6572043.1 Transcription factor RADIALIS, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 150.6 bits (379), Expect = 5.8e-33
Identity = 75/80 (93.75%), Postives = 76/80 (95.00%), Query Frame = 0 

Query: 1  MASMSAHGSAGQWTAKQNKAFEEALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQVLVE 60
          MASMSAHGS G WTAKQNKAFEEALAMYDQD PDRWLNVAKAIGGKTEEEVKRHYQVLVE
Sbjct: 1  MASMSAHGS-GVWTAKQNKAFEEALAMYDQDRPDRWLNVAKAIGGKTEEEVKRHYQVLVE 60

Query: 61 DVKHIESGKVPFPYRSSRAN 81
          DVKHIESGKVPFPYRSSR +
Sbjct: 61 DVKHIESGKVPFPYRSSRGS 79

[Close]
BLAST of HG10005765 vs. NCBI nr
Match: XP_004151116.1 (protein RADIALIS-like 1 [Cucumis sativus] >KGN44075.1 hypothetical protein Csa_020265 [Cucumis sativus])

HSP 1 Score: 150.2 bits (378), Expect = 7.6e-33
Identity = 73/80 (91.25%), Postives = 78/80 (97.50%), Query Frame = 0 

Query: 1  MASMSAHGSAGQWTAKQNKAFEEALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQVLVE 60
          MAS+SAHGS G WTAKQNKAFEEALAMYD+DTPDRWLNVAKAIGGKTEEEVKRHYQ+L+E
Sbjct: 1  MASLSAHGS-GVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLE 60

Query: 61 DVKHIESGKVPFPYRSSRAN 81
          DVKHIESGKVPFPYRSSR+N
Sbjct: 61 DVKHIESGKVPFPYRSSRSN 79

[Close]
BLAST of HG10005765 vs. NCBI nr
Match: KAA0036170.1 (protein RADIALIS-like 1 [Cucumis melo var. makuwa])

HSP 1 Score: 149.8 bits (377), Expect = 9.9e-33
Identity = 73/80 (91.25%), Postives = 77/80 (96.25%), Query Frame = 0 

Query: 1  MASMSAHGSAGQWTAKQNKAFEEALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQVLVE 60
          MASMSAHGS G WTAKQNKAFEEALAMYD+DTPDRWLNVAKAIGGKTEEEVKRHYQ+L+E
Sbjct: 1  MASMSAHGS-GVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLE 60

Query: 61 DVKHIESGKVPFPYRSSRAN 81
          DVKHIESGKVPFPYR+SR N
Sbjct: 61 DVKHIESGKVPFPYRTSRGN 79

[Close]
BLAST of HG10005765 vs. NCBI nr
Match: XP_008447025.1 (PREDICTED: protein RADIALIS-like 1 [Cucumis melo])

HSP 1 Score: 148.3 bits (373), Expect = 2.9e-32
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 0 

Query: 1  MASMSAHGSAGQWTAKQNKAFEEALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQVLVE 60
          MASMSAHGS G WTAKQNKAFE+ALAMYD+DTPDRWLNVAKAIGGKTEEEVKRHYQ+L+E
Sbjct: 1  MASMSAHGS-GVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLE 60

Query: 61 DVKHIESGKVPFPYRSSRAN 81
          DVKHIESGKVPFPYR+SR N
Sbjct: 61 DVKHIESGKVPFPYRTSRGN 79

[Close]
BLAST of HG10005765 vs. NCBI nr
Match: XP_022952074.1 (protein RADIALIS-like 1 [Cucurbita moschata] >XP_023511408.1 protein RADIALIS-like 1 [Cucurbita pepo subsp. pepo] >KAG6572044.1 Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011711.1 Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 141.4 bits (355), Expect = 3.5e-30
Identity = 67/78 (85.90%), Postives = 74/78 (94.87%), Query Frame = 0 

Query: 1  MASMSAHGSAGQWTAKQNKAFEEALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQVLVE 60
          MASMSAHGSAG WTAKQNKAFE+ALA+YDQDTP+RWLNVAKAIGGKTEEEVKRHYQ+L++
Sbjct: 1  MASMSAHGSAGSWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLLK 60

Query: 61 DVKHIESGKVPFPYRSSR 79
          DVK IESG+VPFPY  SR
Sbjct: 61 DVKQIESGEVPFPYGRSR 78

[Close]
BLAST of HG10005765 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.3e-24
Identity = 51/77 (66.23%), Postives = 65/77 (84.42%), Query Frame = 0 

Query: 5  SAHGSAGQWTAKQNKAFEEALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQVLVEDVKH 64
          S  GS   W+AK+NKAFE ALA+YD+DTPDRW NVA+A+ G+T EEVK+HY++LVED+K+
Sbjct: 3  STRGSGRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKY 62

Query: 65 IESGKVPFP-YRSSRAN 81
          IESGKVPFP YR++  N
Sbjct: 63 IESGKVPFPNYRTTGGN 79

[Close]
BLAST of HG10005765 vs. ExPASy Swiss-Prot
Match: F4JVB8 (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 5.1e-24
Identity = 54/77 (70.13%), Postives = 66/77 (85.71%), Query Frame = 0 

Query: 2  ASMSAHGSAGQWTAKQNKAFEEALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQVLVED 61
          +SMS+  S+G WTAKQNKAFE+ALA YDQDTP+RW NVAK +GGKT EEVKRHY++LV+D
Sbjct: 4  SSMSSQ-SSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQD 63

Query: 62 VKHIESGKVPFP-YRSS 78
          +  IE+G VPFP YR+S
Sbjct: 64 INSIENGHVPFPNYRTS 79

[Close]
BLAST of HG10005765 vs. ExPASy Swiss-Prot
Match: Q9SIJ5 (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 3.3e-23
Identity = 52/80 (65.00%), Postives = 65/80 (81.25%), Query Frame = 0 

Query: 3  SMSAHGSAGQWTAKQNKAFEEALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQVLVEDV 62
          SMS++GS G WT KQNKAFE ALA+YDQDTPDRW NVA+A+GGKT EE KR Y +LV D+
Sbjct: 5  SMSSYGS-GSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDI 64

Query: 63 KHIESGKVPFP-YRSSRANN 82
          + IE+G VPFP Y+++  N+
Sbjct: 65 ESIENGHVPFPDYKTTTGNS 83

[Close]
BLAST of HG10005765 vs. ExPASy Swiss-Prot
Match: Q6NNN0 (Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.1e-21
Identity = 50/81 (61.73%), Postives = 59/81 (72.84%), Query Frame = 0 

Query: 1  MASMSAHGSAGQWTAKQNKAFEEALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQVLVE 60
          MAS S   SA  WT K+NK FE ALA YDQDTPDRW NVA+A+GGK+ EEV+RHY++L+ 
Sbjct: 1  MASNSMSSSA-SWTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIR 60

Query: 61 DVKHIESGKVPFPYRSSRANN 82
          DV  IESG+ P P   S  NN
Sbjct: 61 DVNDIESGRYPHPNYRSNGNN 80

[Close]
BLAST of HG10005765 vs. ExPASy Swiss-Prot
Match: Q1A173 (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 6.9e-21
Identity = 50/82 (60.98%), Postives = 64/82 (78.05%), Query Frame = 0 

Query: 1  MASMSAHGSAGQWTAKQNKAFEEALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQVLVE 60
          MAS ++  S   WT  QNK FE ALA+YD+DTPDRW NVAKA+GGKT EEVKRHY +LVE
Sbjct: 1  MAS-NSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVE 60

Query: 61 DVKHIESGKVPFP-YRSSRANN 82
          D+ +IE+G+VP P Y++  +N+
Sbjct: 61 DLINIETGRVPLPNYKTFESNS 81

[Close]
BLAST of HG10005765 vs. ExPASy TrEMBL
Match: A0A6J1IA78 (protein RADIALIS-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111471063 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.8e-33
Identity = 75/80 (93.75%), Postives = 76/80 (95.00%), Query Frame = 0 

Query: 1  MASMSAHGSAGQWTAKQNKAFEEALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQVLVE 60
          MASMSAHGS G WTAKQNKAFEEALAMYDQD PDRWLNVAKAIGGKTEEEVKRHYQVLVE
Sbjct: 1  MASMSAHGS-GVWTAKQNKAFEEALAMYDQDRPDRWLNVAKAIGGKTEEEVKRHYQVLVE 60

Query: 61 DVKHIESGKVPFPYRSSRAN 81
          DVKHIESGKVPFPYRSSR +
Sbjct: 61 DVKHIESGKVPFPYRSSRGS 79

[Close]
BLAST of HG10005765 vs. ExPASy TrEMBL
Match: A0A6J1GJG0 (protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111454835 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.8e-33
Identity = 75/80 (93.75%), Postives = 76/80 (95.00%), Query Frame = 0 

Query: 1  MASMSAHGSAGQWTAKQNKAFEEALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQVLVE 60
          MASMSAHGS G WTAKQNKAFEEALAMYDQD PDRWLNVAKAIGGKTEEEVKRHYQVLVE
Sbjct: 1  MASMSAHGS-GVWTAKQNKAFEEALAMYDQDRPDRWLNVAKAIGGKTEEEVKRHYQVLVE 60

Query: 61 DVKHIESGKVPFPYRSSRAN 81
          DVKHIESGKVPFPYRSSR +
Sbjct: 61 DVKHIESGKVPFPYRSSRGS 79

[Close]
BLAST of HG10005765 vs. ExPASy TrEMBL
Match: A0A0A0K344 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G169070 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.7e-33
Identity = 73/80 (91.25%), Postives = 78/80 (97.50%), Query Frame = 0 

Query: 1  MASMSAHGSAGQWTAKQNKAFEEALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQVLVE 60
          MAS+SAHGS G WTAKQNKAFEEALAMYD+DTPDRWLNVAKAIGGKTEEEVKRHYQ+L+E
Sbjct: 1  MASLSAHGS-GVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLE 60

Query: 61 DVKHIESGKVPFPYRSSRAN 81
          DVKHIESGKVPFPYRSSR+N
Sbjct: 61 DVKHIESGKVPFPYRSSRSN 79

[Close]
BLAST of HG10005765 vs. ExPASy TrEMBL
Match: A0A5A7SYM4 (Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold69G00290 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.8e-33
Identity = 73/80 (91.25%), Postives = 77/80 (96.25%), Query Frame = 0 

Query: 1  MASMSAHGSAGQWTAKQNKAFEEALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQVLVE 60
          MASMSAHGS G WTAKQNKAFEEALAMYD+DTPDRWLNVAKAIGGKTEEEVKRHYQ+L+E
Sbjct: 1  MASMSAHGS-GVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLE 60

Query: 61 DVKHIESGKVPFPYRSSRAN 81
          DVKHIESGKVPFPYR+SR N
Sbjct: 61 DVKHIESGKVPFPYRTSRGN 79

[Close]
BLAST of HG10005765 vs. ExPASy TrEMBL
Match: A0A1S3BGF6 (protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489576 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.4e-32
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 0 

Query: 1  MASMSAHGSAGQWTAKQNKAFEEALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQVLVE 60
          MASMSAHGS G WTAKQNKAFE+ALAMYD+DTPDRWLNVAKAIGGKTEEEVKRHYQ+L+E
Sbjct: 1  MASMSAHGS-GVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLE 60

Query: 61 DVKHIESGKVPFPYRSSRAN 81
          DVKHIESGKVPFPYR+SR N
Sbjct: 61 DVKHIESGKVPFPYRTSRGN 79

[Close]
BLAST of HG10005765 vs. TAIR 10
Match: AT4G39250.1 (RAD-like 1 )

HSP 1 Score: 111.3 bits (277), Expect = 3.6e-25
Identity = 54/77 (70.13%), Postives = 66/77 (85.71%), Query Frame = 0 

Query: 2  ASMSAHGSAGQWTAKQNKAFEEALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQVLVED 61
          +SMS+  S+G WTAKQNKAFE+ALA YDQDTP+RW NVAK +GGKT EEVKRHY++LV+D
Sbjct: 4  SSMSSQ-SSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQD 63

Query: 62 VKHIESGKVPFP-YRSS 78
          +  IE+G VPFP YR+S
Sbjct: 64 INSIENGHVPFPNYRTS 79

[Close]
BLAST of HG10005765 vs. TAIR 10
Match: AT2G21650.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 108.6 bits (270), Expect = 2.4e-24
Identity = 52/80 (65.00%), Postives = 65/80 (81.25%), Query Frame = 0 

Query: 3  SMSAHGSAGQWTAKQNKAFEEALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQVLVEDV 62
          SMS++GS G WT KQNKAFE ALA+YDQDTPDRW NVA+A+GGKT EE KR Y +LV D+
Sbjct: 5  SMSSYGS-GSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDI 64

Query: 63 KHIESGKVPFP-YRSSRANN 82
          + IE+G VPFP Y+++  N+
Sbjct: 65 ESIENGHVPFPDYKTTTGNS 83

[Close]
BLAST of HG10005765 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 )

HSP 1 Score: 100.9 bits (250), Expect = 4.9e-22
Identity = 50/82 (60.98%), Postives = 64/82 (78.05%), Query Frame = 0 

Query: 1  MASMSAHGSAGQWTAKQNKAFEEALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQVLVE 60
          MAS ++  S   WT  QNK FE ALA+YD+DTPDRW NVAKA+GGKT EEVKRHY +LVE
Sbjct: 1  MAS-NSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVE 60

Query: 61 DVKHIESGKVPFP-YRSSRANN 82
          D+ +IE+G+VP P Y++  +N+
Sbjct: 61 DLINIETGRVPLPNYKTFESNS 81

[Close]
BLAST of HG10005765 vs. TAIR 10
Match: AT1G75250.2 (RAD-like 6 )

HSP 1 Score: 100.9 bits (250), Expect = 4.9e-22
Identity = 50/82 (60.98%), Postives = 64/82 (78.05%), Query Frame = 0 

Query: 1  MASMSAHGSAGQWTAKQNKAFEEALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQVLVE 60
          MAS ++  S   WT  QNK FE ALA+YD+DTPDRW NVAKA+GGKT EEVKRHY +LVE
Sbjct: 1  MAS-NSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVE 60

Query: 61 DVKHIESGKVPFP-YRSSRANN 82
          D+ +IE+G+VP P Y++  +N+
Sbjct: 61 DLINIETGRVPLPNYKTFESNS 81

[Close]
BLAST of HG10005765 vs. TAIR 10
Match: AT1G19510.1 (RAD-like 5 )

HSP 1 Score: 97.4 bits (241), Expect = 5.5e-21
Identity = 47/73 (64.38%), Postives = 57/73 (78.08%), Query Frame = 0 

Query: 1  MASMSAHGSAGQWTAKQNKAFEEALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQVLVE 60
          MAS S+  S+  WT+KQNK FE ALA+YD+DTPDRW NVAKA+G K+ EEVKRHY +LVE
Sbjct: 1  MAS-SSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVE 60

Query: 61 DVKHIESGKVPFP 74
          D+ +IE   VP P
Sbjct: 61 DLMNIEQDLVPLP 72

The following BLAST results are available for this feature:
BLAST of HG10005765 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022952073.15.8e-3393.75protein RADIALIS-like 1 [Cucurbita moschata] >XP_022972518.1 protein RADIALIS-li... [more]
XP_004151116.17.6e-3391.25protein RADIALIS-like 1 [Cucumis sativus] >KGN44075.1 hypothetical protein Csa_0... [more]
KAA0036170.19.9e-3391.25protein RADIALIS-like 1 [Cucumis melo var. makuwa][more]
XP_008447025.12.9e-3290.00PREDICTED: protein RADIALIS-like 1 [Cucumis melo][more]
XP_022952074.13.5e-3085.90protein RADIALIS-like 1 [Cucurbita moschata] >XP_023511408.1 protein RADIALIS-li... [more]
BLAST of HG10005765 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q58FS32.3e-2466.23Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1[more]
F4JVB85.1e-2470.13Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1[more]
Q9SIJ53.3e-2365.00Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1[more]
Q6NNN03.1e-2161.73Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1[more]
Q1A1736.9e-2160.98Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1[more]
BLAST of HG10005765 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IA782.8e-3393.75protein RADIALIS-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111471063 PE=4 SV=1[more]
A0A6J1GJG02.8e-3393.75protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111454835 PE=4 SV=1[more]
A0A0A0K3443.7e-3391.25SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G169070 PE=4 S... [more]
A0A5A7SYM44.8e-3391.25Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A1S3BGF61.4e-3290.00protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489576 PE=4 SV=1[more]
BLAST of HG10005765 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G39250.13.6e-2570.13RAD-like 1 [more]
AT2G21650.12.4e-2465.00Homeodomain-like superfamily protein [more]
AT1G75250.14.9e-2260.98RAD-like 6 [more]
AT1G75250.24.9e-2260.98RAD-like 6 [more]
AT1G19510.15.5e-2164.38RAD-like 5 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 9..61
e-value: 2.4E-7
score: 40.4
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 5..59
score: 6.492739
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 13..59
e-value: 5.95083E-7
score: 39.8662
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 11..58
e-value: 6.0E-7
score: 29.6
NoneNo IPR availableGENE3D1.10.10.60coord: 4..72
e-value: 2.0E-24
score: 87.1
NoneNo IPR availablePANTHERPTHR43952:SF68MYB FAMILY TRANSCRIPTION FACTOR-RELATEDcoord: 1..78
IPR044636Transcription factor RADIALIS-likePANTHERPTHR43952MYB FAMILY TRANSCRIPTION FACTOR-RELATEDcoord: 1..78
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 11..67

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10005765.1HG10005765.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003700 DNA-binding transcription factor activity