HG10005763 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005763
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Protein RADIALIS-like 1
Location	Chr07: 5650912 .. 5651184 (-)
RNA-Seq Expression	HG10005763
Synteny	HG10005763

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTATGTCTTCCCATGGATCTGGTACATGGACTGCAAAGCAAAACAAGGCCTTTGAGAAGGCATTGGCAGTTTATGATCAAGACACACCTGACCGATGGCTCAATGTTGCAAAAGCTGTTGGTGGAAAAACAGCTGAGGAAGTCAAAAGGCATTATGCACTTCTTGTTGAGGATGTTAAGTTTATTGAGTCTGGCCAAGTTCCTTACCCTTATCGAACCTCCGGAGGCGGTAGCCAAGGTAATATAAGCTTTCTGATTTATTGGTGA

mRNA sequence

ATGGCTTCTATGTCTTCCCATGGATCTGGTACATGGACTGCAAAGCAAAACAAGGCCTTTGAGAAGGCATTGGCAGTTTATGATCAAGACACACCTGACCGATGGCTCAATGTTGCAAAAGCTGTTGGTGGAAAAACAGCTGAGGAAGTCAAAAGGCATTATGCACTTCTTGTTGAGGATGTTAAGTTTATTGAGTCTGGCCAAGTTCCTTACCCTTATCGAACCTCCGGAGGCGGTAGCCAAGGTAATATAAGCTTTCTGATTTATTGGTGA

Coding sequence (CDS)

ATGGCTTCTATGTCTTCCCATGGATCTGGTACATGGACTGCAAAGCAAAACAAGGCCTTTGAGAAGGCATTGGCAGTTTATGATCAAGACACACCTGACCGATGGCTCAATGTTGCAAAAGCTGTTGGTGGAAAAACAGCTGAGGAAGTCAAAAGGCATTATGCACTTCTTGTTGAGGATGTTAAGTTTATTGAGTCTGGCCAAGTTCCTTACCCTTATCGAACCTCCGGAGGCGGTAGCCAAGGTAATATAAGCTTTCTGATTTATTGGTGA

Protein sequence

MASMSSHGSGTWTAKQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVEDVKFIESGQVPYPYRTSGGGSQGNISFLIYW

Homology

[Close]

BLAST of HG10005763 vs. NCBI nr
Match: KAA0036150.1 (protein RADIALIS-like 1 [Cucumis melo var. makuwa] >TYK01768.1 protein RADIALIS-like 1 [Cucumis melo var. makuwa])

HSP 1 Score: 166.0 bits (419), Expect = 1.5e-37
Identity = 79/83 (95.18%), Postives = 81/83 (97.59%), Query Frame = 0


Query: 1  MASMSSHGSGTWTAKQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED 60
          MASMSSHGSGTWT KQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED
Sbjct: 1  MASMSSHGSGTWTVKQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED 60

Query: 61 VKFIESGQVPYPYRTSGGGSQGN 84
          VKFIESGQVP+PYRTSG G+QGN
Sbjct: 61 VKFIESGQVPFPYRTSGDGNQGN 83

[Close]

BLAST of HG10005763 vs. NCBI nr
Match: XP_004151125.2 (protein RADIALIS-like 1 [Cucumis sativus])

HSP 1 Score: 164.1 bits (414), Expect = 5.7e-37
Identity = 78/82 (95.12%), Postives = 80/82 (97.56%), Query Frame = 0


Query: 1  MASMSSHGSGTWTAKQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED 60
          MASMSSHGSGTWT  QNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED
Sbjct: 1  MASMSSHGSGTWTVTQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED 60

Query: 61 VKFIESGQVPYPYRTSGGGSQG 83
          VKFIESGQVP+PYRTSGGG+QG
Sbjct: 61 VKFIESGQVPFPYRTSGGGNQG 82

[Close]

BLAST of HG10005763 vs. NCBI nr
Match: XP_008447024.1 (PREDICTED: protein RADIALIS-like 1 [Cucumis melo])

HSP 1 Score: 163.7 bits (413), Expect = 7.4e-37
Identity = 78/82 (95.12%), Postives = 80/82 (97.56%), Query Frame = 0


Query: 1  MASMSSHGSGTWTAKQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED 60
          MASMSSHGSGTWT KQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED
Sbjct: 1  MASMSSHGSGTWTVKQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED 60

Query: 61 VKFIESGQVPYPYRTSGGGSQG 83
          VKFIESGQVP+PYRTSG G+QG
Sbjct: 61 VKFIESGQVPFPYRTSGDGNQG 82

[Close]

BLAST of HG10005763 vs. NCBI nr
Match: KAG7011712.1 (Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 162.9 bits (411), Expect = 1.3e-36
Identity = 80/89 (89.89%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1  MASMSSHGS-GTWTAKQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVE 60
          MASMSSHGS GTWT KQNKAFE+ALAVYDQDTPDRWLNVAKAV GKTAEEV+RHYALLVE
Sbjct: 1  MASMSSHGSAGTWTVKQNKAFEQALAVYDQDTPDRWLNVAKAVPGKTAEEVERHYALLVE 60

Query: 61 DVKFIESGQVPYPYRTSGGGSQGNISFLI 89
          DVKFIESGQVP+PYRTSGGG++GNISF I
Sbjct: 61 DVKFIESGQVPFPYRTSGGGTRGNISFWI 89

[Close]

BLAST of HG10005763 vs. NCBI nr
Match: KAE8645641.1 (hypothetical protein Csa_020418 [Cucumis sativus])

HSP 1 Score: 162.9 bits (411), Expect = 1.3e-36
Identity = 78/85 (91.76%), Postives = 81/85 (95.29%), Query Frame = 0


Query: 1  MASMSSHGSGTWTAKQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED 60
          MASMSSHGSGTWT  QNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED
Sbjct: 1  MASMSSHGSGTWTVTQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED 60

Query: 61 VKFIESGQVPYPYRTSGGGSQGNIS 86
          VKFIESGQVP+PYRTSGGG+Q  +S
Sbjct: 61 VKFIESGQVPFPYRTSGGGNQEEMS 85

[Close]

BLAST of HG10005763 vs. ExPASy Swiss-Prot
Match: F4JVB8 (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 4.5e-29
Identity = 61/85 (71.76%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 2  ASMSSHGSGTWTAKQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVEDV 61
          +SMSS  SG+WTAKQNKAFE+ALA YDQDTP+RW NVAK VGGKT EEVKRHY LLV+D+
Sbjct: 4  SSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDI 63

Query: 62 KFIESGQVPYP-YRTSGGGSQGNIS 86
            IE+G VP+P YRTSGG + G +S
Sbjct: 64 NSIENGHVPFPNYRTSGGCTNGRLS 88

[Close]

BLAST of HG10005763 vs. ExPASy Swiss-Prot
Match: Q9SIJ5 (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.6e-26
Identity = 57/79 (72.15%), Postives = 67/79 (84.81%), Query Frame = 0


Query: 3  SMSSHGSGTWTAKQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVEDVK 62
          SMSS+GSG+WT KQNKAFE+ALAVYDQDTPDRW NVA+AVGGKT EE KR Y LLV D++
Sbjct: 5  SMSSYGSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIE 64

Query: 63 FIESGQVPYP-YRTSGGGS 81
           IE+G VP+P Y+T+ G S
Sbjct: 65 SIENGHVPFPDYKTTTGNS 83

[Close]

BLAST of HG10005763 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 3.0e-25
Identity = 54/76 (71.05%), Postives = 68/76 (89.47%), Query Frame = 0


Query: 5  SSHGSG-TWTAKQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVEDVKF 64
          S+ GSG  W+AK+NKAFE+ALAVYD+DTPDRW NVA+AV G+T EEVK+HY +LVED+K+
Sbjct: 3  STRGSGRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKY 62

Query: 65 IESGQVPYP-YRTSGG 79
          IESG+VP+P YRT+GG
Sbjct: 63 IESGKVPFPNYRTTGG 78

[Close]

BLAST of HG10005763 vs. ExPASy Swiss-Prot
Match: Q6NNN0 (Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.2e-23
Identity = 52/78 (66.67%), Postives = 63/78 (80.77%), Query Frame = 0


Query: 1  MASMSSHGSGTWTAKQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED 60
          MAS S   S +WT K+NK FE+ALA YDQDTPDRW NVA+AVGGK+AEEV+RHY LL+ D
Sbjct: 1  MASNSMSSSASWTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRD 60

Query: 61 VKFIESGQVPYP-YRTSG 78
          V  IESG+ P+P YR++G
Sbjct: 61 VNDIESGRYPHPNYRSNG 78

[Close]

BLAST of HG10005763 vs. ExPASy Swiss-Prot
Match: Q8GW75 (Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.4e-22
Identity = 54/82 (65.85%), Postives = 63/82 (76.83%), Query Frame = 0


Query: 1  MASMSSHGSGTWTAKQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED 60
          MAS S   S +WT+KQNK FE+ALAVYD+DTPDRW NVAKAVG K+AEEVKRHY +LVED
Sbjct: 1  MASSSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVED 60

Query: 61 VKFIESGQVPYP-YRTSGGGSQ 82
          +  IE   VP P Y+T   GS+
Sbjct: 61 LMNIEQDLVPLPKYKTVDVGSK 82

[Close]

BLAST of HG10005763 vs. ExPASy TrEMBL
Match: A0A5A7SYK4 (Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1323G00110 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 7.2e-38
Identity = 79/83 (95.18%), Postives = 81/83 (97.59%), Query Frame = 0


Query: 1  MASMSSHGSGTWTAKQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED 60
          MASMSSHGSGTWT KQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED
Sbjct: 1  MASMSSHGSGTWTVKQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED 60

Query: 61 VKFIESGQVPYPYRTSGGGSQGN 84
          VKFIESGQVP+PYRTSG G+QGN
Sbjct: 61 VKFIESGQVPFPYRTSGDGNQGN 83

[Close]

BLAST of HG10005763 vs. ExPASy TrEMBL
Match: A0A0A0K348 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G170600 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.7e-37
Identity = 78/82 (95.12%), Postives = 80/82 (97.56%), Query Frame = 0


Query: 1  MASMSSHGSGTWTAKQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED 60
          MASMSSHGSGTWT  QNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED
Sbjct: 1  MASMSSHGSGTWTVTQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED 60

Query: 61 VKFIESGQVPYPYRTSGGGSQG 83
          VKFIESGQVP+PYRTSGGG+QG
Sbjct: 61 VKFIESGQVPFPYRTSGGGNQG 82

[Close]

BLAST of HG10005763 vs. ExPASy TrEMBL
Match: A0A1S3BFW6 (protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489573 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.6e-37
Identity = 78/82 (95.12%), Postives = 80/82 (97.56%), Query Frame = 0


Query: 1  MASMSSHGSGTWTAKQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED 60
          MASMSSHGSGTWT KQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED
Sbjct: 1  MASMSSHGSGTWTVKQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED 60

Query: 61 VKFIESGQVPYPYRTSGGGSQG 83
          VKFIESGQVP+PYRTSG G+QG
Sbjct: 61 VKFIESGQVPFPYRTSGDGNQG 82

[Close]

BLAST of HG10005763 vs. ExPASy TrEMBL
Match: A0A6J1C385 (protein RADIALIS-like 1 OS=Momordica charantia OX=3673 GN=LOC111007847 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 6.7e-36
Identity = 76/85 (89.41%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 1  MASMSSHGSGTWTAKQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED 60
          MASMSSHGS  WTAKQNKAFEKALAVYDQDTP+RWLNVAKAVGGKTAEEVKRHY LLVED
Sbjct: 1  MASMSSHGSSAWTAKQNKAFEKALAVYDQDTPERWLNVAKAVGGKTAEEVKRHYELLVED 60

Query: 61 VKFIESGQVPYPYRTSGGGSQGNIS 86
          VKFIESGQV +PYRTSGGGS GN++
Sbjct: 61 VKFIESGQVSFPYRTSGGGSHGNMT 85

[Close]

BLAST of HG10005763 vs. ExPASy TrEMBL
Match: A0A6J1GJE9 (protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111454834 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.8e-34
Identity = 75/83 (90.36%), Postives = 79/83 (95.18%), Query Frame = 0


Query: 1  MASMSSHGS-GTWTAKQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVE 60
          MASMSSHGS GTWT KQNKAFE+ALAVYDQDTPDRWLNVAKAV GKT EEV+RHYALLVE
Sbjct: 1  MASMSSHGSAGTWTVKQNKAFEQALAVYDQDTPDRWLNVAKAVPGKTVEEVERHYALLVE 60

Query: 61 DVKFIESGQVPYPYRTSGGGSQG 83
          DVKFIESGQVP+PYRTSGGG+QG
Sbjct: 61 DVKFIESGQVPFPYRTSGGGTQG 83

[Close]

BLAST of HG10005763 vs. TAIR 10
Match: AT4G39250.1 (RAD-like 1 )

HSP 1 Score: 128.3 bits (321), Expect = 3.2e-30
Identity = 61/85 (71.76%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 2  ASMSSHGSGTWTAKQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVEDV 61
          +SMSS  SG+WTAKQNKAFE+ALA YDQDTP+RW NVAK VGGKT EEVKRHY LLV+D+
Sbjct: 4  SSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDI 63

Query: 62 KFIESGQVPYP-YRTSGGGSQGNIS 86
            IE+G VP+P YRTSGG + G +S
Sbjct: 64 NSIENGHVPFPNYRTSGGCTNGRLS 88

[Close]

BLAST of HG10005763 vs. TAIR 10
Match: AT2G21650.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 119.8 bits (299), Expect = 1.1e-27
Identity = 57/79 (72.15%), Postives = 67/79 (84.81%), Query Frame = 0


Query: 3  SMSSHGSGTWTAKQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVEDVK 62
          SMSS+GSG+WT KQNKAFE+ALAVYDQDTPDRW NVA+AVGGKT EE KR Y LLV D++
Sbjct: 5  SMSSYGSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIE 64

Query: 63 FIESGQVPYP-YRTSGGGS 81
           IE+G VP+P Y+T+ G S
Sbjct: 65 SIENGHVPFPDYKTTTGNS 83

[Close]

BLAST of HG10005763 vs. TAIR 10
Match: AT1G19510.1 (RAD-like 5 )

HSP 1 Score: 106.7 bits (265), Expect = 1.0e-23
Identity = 54/82 (65.85%), Postives = 63/82 (76.83%), Query Frame = 0


Query: 1  MASMSSHGSGTWTAKQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED 60
          MAS S   S +WT+KQNK FE+ALAVYD+DTPDRW NVAKAVG K+AEEVKRHY +LVED
Sbjct: 1  MASSSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVED 60

Query: 61 VKFIESGQVPYP-YRTSGGGSQ 82
          +  IE   VP P Y+T   GS+
Sbjct: 61 LMNIEQDLVPLPKYKTVDVGSK 82

[Close]

BLAST of HG10005763 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 )

HSP 1 Score: 104.0 bits (258), Expect = 6.5e-23
Identity = 53/82 (64.63%), Postives = 61/82 (74.39%), Query Frame = 0


Query: 1  MASMSSHGSGTWTAKQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED 60
          MAS S      WT  QNK FE+ALAVYD+DTPDRW NVAKAVGGKT EEVKRHY +LVED
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 VKFIESGQVPYP-YRTSGGGSQ 82
          +  IE+G+VP P Y+T    S+
Sbjct: 61 LINIETGRVPLPNYKTFESNSR 82

[Close]

BLAST of HG10005763 vs. TAIR 10
Match: AT1G75250.2 (RAD-like 6 )

HSP 1 Score: 104.0 bits (258), Expect = 6.5e-23
Identity = 53/82 (64.63%), Postives = 61/82 (74.39%), Query Frame = 0


Query: 1  MASMSSHGSGTWTAKQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED 60
          MAS S      WT  QNK FE+ALAVYD+DTPDRW NVAKAVGGKT EEVKRHY +LVED
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 VKFIESGQVPYP-YRTSGGGSQ 82
          +  IE+G+VP P Y+T    S+
Sbjct: 61 LINIETGRVPLPNYKTFESNSR 82

The following BLAST results are available for this feature:

BLAST of HG10005763 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036150.1	1.5e-37	95.18	protein RADIALIS-like 1 [Cucumis melo var. makuwa] >TYK01768.1 protein RADIALIS-...	[more]
XP_004151125.2	5.7e-37	95.12	protein RADIALIS-like 1 [Cucumis sativus]	[more]
XP_008447024.1	7.4e-37	95.12	PREDICTED: protein RADIALIS-like 1 [Cucumis melo]	[more]
KAG7011712.1	1.3e-36	89.89	Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAE8645641.1	1.3e-36	91.76	hypothetical protein Csa_020418 [Cucumis sativus]	[more]

BLAST of HG10005763 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JVB8	4.5e-29	71.76	Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1	[more]
Q9SIJ5	1.6e-26	72.15	Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1	[more]
Q58FS3	3.0e-25	71.05	Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1	[more]
Q6NNN0	2.2e-23	66.67	Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1	[more]
Q8GW75	1.4e-22	65.85	Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1	[more]

BLAST of HG10005763 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SYK4	7.2e-38	95.18	Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0K348	2.7e-37	95.12	SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G170600 PE=4 S...	[more]
A0A1S3BFW6	3.6e-37	95.12	protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489573 PE=4 SV=1	[more]
A0A6J1C385	6.7e-36	89.41	protein RADIALIS-like 1 OS=Momordica charantia OX=3673 GN=LOC111007847 PE=4 SV=1	[more]
A0A6J1GJE9	2.8e-34	90.36	protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111454834 PE=4 SV=1	[more]

BLAST of HG10005763 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39250.1	3.2e-30	71.76	RAD-like 1	[more]
AT2G21650.1	1.1e-27	72.15	Homeodomain-like superfamily protein	[more]
AT1G19510.1	1.0e-23	65.85	RAD-like 5	[more]
AT1G75250.1	6.5e-23	64.63	RAD-like 6	[more]
AT1G75250.2	6.5e-23	64.63	RAD-like 6	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 8..60 e-value: 3.1E-7 score: 40.0
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 4..58 score: 6.10953
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 11..54 e-value: 5.57485E-7 score: 40.2514
None	No IPR available	GENE3D	1.10.10.60		coord: 3..71 e-value: 2.4E-23 score: 83.7
None	No IPR available	PANTHER	PTHR43952:SF73	PROTEIN RADIALIS-LIKE 1	coord: 1..79
IPR044636	Transcription factor RADIALIS-like	PANTHER	PTHR43952	MYB FAMILY TRANSCRIPTION FACTOR-RELATED	coord: 1..79
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 7..62 score: 9.502541
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 10..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005763.1	HG10005763.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity