HG10005739 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005739
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Nuclear polyadenylated RNA-binding protein 3-like
Location	Chr07: 5280971 .. 5281531 (+)
RNA-Seq Expression	HG10005739
Synteny	HG10005739

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCCATTTCTGGATCATCATCATCTTCTTCTTCTTTGGAATTCGTGTTTTACGATGATTTTGAATACGAATTTGTTGAAGAAATCGAACGTCTTTCGAACTGGGAGTTGCTCGATGCTTTTGATGCTGATTCAGAAATGGACGGAAATGGAGGCGAAGAACAAGGGCAAAATTGCAGCGTTGTCGCTAGAGTTCATGAAGATCTTCGAGAAATGATTTCTCCTGTTCTTGCGGTGCCGATTTCGCTTGTGGAGGATCGAATCGACGGTTCTTTGGAAGATGTTTATTTCCTTCAGAATCAAGCGGAAGACGGTTTTGCGTACGGTTATAACGATGCGCAGGAGGAGGATGAAACCGATGATGATGATGATGAGTTCGATTTGGATGACGAACTCGTTCCGTGGTCTGTCAGTGATAAACTCGGACGGCAAAGGATGAGGAAATTGGGGAAAAGAGGTTTTACGAAGATGTATAATTCGAAGAGATCTCCGTTTTTGTTCACCAAGCCTGGATGTGTCCGCGGCAAGCACGGACTCGGATTGAAACACAGTTATTAG

mRNA sequence

ATGGCGGCCATTTCTGGATCATCATCATCTTCTTCTTCTTTGGAATTCGTGTTTTACGATGATTTTGAATACGAATTTGTTGAAGAAATCGAACGTCTTTCGAACTGGGAGTTGCTCGATGCTTTTGATGCTGATTCAGAAATGGACGGAAATGGAGGCGAAGAACAAGGGCAAAATTGCAGCGTTGTCGCTAGAGTTCATGAAGATCTTCGAGAAATGATTTCTCCTGTTCTTGCGGTGCCGATTTCGCTTGTGGAGGATCGAATCGACGGTTCTTTGGAAGATGTTTATTTCCTTCAGAATCAAGCGGAAGACGGTTTTGCGTACGGTTATAACGATGCGCAGGAGGAGGATGAAACCGATGATGATGATGATGAGTTCGATTTGGATGACGAACTCGTTCCGTGGTCTGTCAGTGATAAACTCGGACGGCAAAGGATGAGGAAATTGGGGAAAAGAGGTTTTACGAAGATGTATAATTCGAAGAGATCTCCGTTTTTGTTCACCAAGCCTGGATGTGTCCGCGGCAAGCACGGACTCGGATTGAAACACAGTTATTAG

Coding sequence (CDS)

ATGGCGGCCATTTCTGGATCATCATCATCTTCTTCTTCTTTGGAATTCGTGTTTTACGATGATTTTGAATACGAATTTGTTGAAGAAATCGAACGTCTTTCGAACTGGGAGTTGCTCGATGCTTTTGATGCTGATTCAGAAATGGACGGAAATGGAGGCGAAGAACAAGGGCAAAATTGCAGCGTTGTCGCTAGAGTTCATGAAGATCTTCGAGAAATGATTTCTCCTGTTCTTGCGGTGCCGATTTCGCTTGTGGAGGATCGAATCGACGGTTCTTTGGAAGATGTTTATTTCCTTCAGAATCAAGCGGAAGACGGTTTTGCGTACGGTTATAACGATGCGCAGGAGGAGGATGAAACCGATGATGATGATGATGAGTTCGATTTGGATGACGAACTCGTTCCGTGGTCTGTCAGTGATAAACTCGGACGGCAAAGGATGAGGAAATTGGGGAAAAGAGGTTTTACGAAGATGTATAATTCGAAGAGATCTCCGTTTTTGTTCACCAAGCCTGGATGTGTCCGCGGCAAGCACGGACTCGGATTGAAACACAGTTATTAG

Protein sequence

MAAISGSSSSSSSLEFVFYDDFEYEFVEEIERLSNWELLDAFDADSEMDGNGGEEQGQNCSVVARVHEDLREMISPVLAVPISLVEDRIDGSLEDVYFLQNQAEDGFAYGYNDAQEEDETDDDDDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

Homology

[Close]

BLAST of HG10005739 vs. NCBI nr
Match: XP_011658549.2 (uncharacterized protein LOC101212092 [Cucumis sativus] >KAE8645645.1 hypothetical protein Csa_020485 [Cucumis sativus])

HSP 1 Score: 330.1 bits (845), Expect = 1.2e-86
Identity = 170/187 (90.91%), Postives = 175/187 (93.58%), Query Frame = 0


Query: 1   MAAISG-SSSSSSSLEFVFYDDFEYEFVEEIERLSNWELLDAFDADSEMDGNGGEEQGQN 60
           M AISG SSSSSSS+EFVFYDDFEYEFVE+IERLSNWELLDAFDADSEM GNGGEEQG N
Sbjct: 37  MEAISGSSSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGGN 96

Query: 61  CSVVARVHEDLREMISPVLAVPISLVEDRIDGSLEDVYFLQNQAEDGFAYGYNDAQEEDE 120
           CSV   V +DLREMISPVLAVPISLVEDRID SLED YFL NQAEDGFAYGYNDA+EEDE
Sbjct: 97  CSVDDNVSQDLREMISPVLAVPISLVEDRIDCSLEDAYFLHNQAEDGFAYGYNDAEEEDE 156

Query: 121 TDDDDDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHG 180
            DDD+DEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHG
Sbjct: 157 VDDDEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHG 216

Query: 181 LGLKHSY 187
           LGLKHSY
Sbjct: 217 LGLKHSY 223

[Close]

BLAST of HG10005739 vs. NCBI nr
Match: KAA0033784.1 (nuclear polyadenylated RNA-binding protein 3-like [Cucumis melo var. makuwa] >TYK22350.1 nuclear polyadenylated RNA-binding protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 319.3 bits (817), Expect = 2.2e-83
Identity = 166/187 (88.77%), Postives = 174/187 (93.05%), Query Frame = 0


Query: 1   MAAISGSSSSSSSLEFVFYDDFEYEFVEEIERLSNWELLDAFDADSEMDGNGGEEQGQNC 60
           M A+SG SSSSSS+EFVFYDDFEYEFVE+IERLSNWELLDAFDADSEM GNGGEEQG+N 
Sbjct: 1   MEAVSG-SSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENY 60

Query: 61  SVVARVHEDLREMISPVLAVPISLVEDRIDGSLEDVYFLQNQAEDGFAYGYNDAQEEDET 120
           SV   V +DLREMISPVLAVPISLVEDRIDGSLED  FL NQAEDGFAYGY+DA+EEDE 
Sbjct: 61  SVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHNQAEDGFAYGYDDAEEEDEV 120

Query: 121 DDD-DDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHG 180
           DDD +DEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHG
Sbjct: 121 DDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHG 180

Query: 181 LGLKHSY 187
           LGLKHSY
Sbjct: 181 LGLKHSY 186

[Close]

BLAST of HG10005739 vs. NCBI nr
Match: XP_008448068.1 (PREDICTED: uncharacterized protein LOC103490356 [Cucumis melo])

HSP 1 Score: 317.0 bits (811), Expect = 1.1e-82
Identity = 163/183 (89.07%), Postives = 171/183 (93.44%), Query Frame = 0


Query: 5   SGSSSSSSSLEFVFYDDFEYEFVEEIERLSNWELLDAFDADSEMDGNGGEEQGQNCSVVA 64
           S SSSSSSS+EFVFYDDFEYEFVE+IERLSNWELLDAFDADSEM GNGGEEQG+N SV  
Sbjct: 12  SSSSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYSVDD 71

Query: 65  RVHEDLREMISPVLAVPISLVEDRIDGSLEDVYFLQNQAEDGFAYGYNDAQEEDETDD-D 124
            V +DLREMISPVLAVPISLVEDRIDGSLED  FL NQAEDGFAYGY+DA+EEDE DD +
Sbjct: 72  NVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHNQAEDGFAYGYDDAEEEDEVDDEE 131

Query: 125 DDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLK 184
           +DEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLK
Sbjct: 132 EDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLK 191

Query: 185 HSY 187
           HSY
Sbjct: 192 HSY 194

[Close]

BLAST of HG10005739 vs. NCBI nr
Match: XP_038886897.1 (uncharacterized protein LOC120077100 [Benincasa hispida])

HSP 1 Score: 305.8 bits (782), Expect = 2.5e-79
Identity = 163/190 (85.79%), Postives = 171/190 (90.00%), Query Frame = 0


Query: 1   MAAISGSSSSSS-SLEFVFYDDFEYEFVEEIERLSNWELLDAFDADSEMDGNGGEEQGQN 60
           M AISGSSSSSS S  FVF DDFEYEFVE+IERLSNWELLDAFDADSEMDGNG EEQG+N
Sbjct: 1   MEAISGSSSSSSISWGFVFCDDFEYEFVEDIERLSNWELLDAFDADSEMDGNGSEEQGEN 60

Query: 61  CSVVARVHEDLREMISPVLAVPISLVEDRIDGSLEDVYFLQNQAEDGFAYGYNDA---QE 120
           CSV  RV+EDLREMI     VPISLVEDRIDGSLED++FLQNQAED FAYGYND+   +E
Sbjct: 61  CSVDDRVYEDLREMI-----VPISLVEDRIDGSLEDIFFLQNQAEDTFAYGYNDSAEEEE 120

Query: 121 EDETDDDDDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRG 180
           E+E D DDDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRG
Sbjct: 121 EEEIDGDDDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRG 180

Query: 181 KHGLGLKHSY 187
           KHGLGLKHSY
Sbjct: 181 KHGLGLKHSY 185

[Close]

BLAST of HG10005739 vs. NCBI nr
Match: XP_023553634.1 (histone H2A.Z-specific chaperone CHZ1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.8 bits (774), Expect = 2.1e-78
Identity = 156/196 (79.59%), Postives = 172/196 (87.76%), Query Frame = 0


Query: 1   MAAISG-SSSSSSSLEFVFYDDFEYEFVEEIERLSNWELLDAFDADSEMDGNGGEEQGQN 60
           M A+SG SSSSSSS+EF FYDDFEYEFVE++ERLSNWE L+A DADSEMDGNGGE++G+N
Sbjct: 1   MEAMSGASSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKEGKN 60

Query: 61  CSVVARVHEDLREMISPVLAVPISLVEDRIDGSLEDVYFLQNQAEDGFAYGYNDAQE--- 120
           C VVAR+ EDLRE+ISPV+ VPISL EDRI   LEDVYFLQN AEDGFAYGYNDA+E   
Sbjct: 61  CCVVARIPEDLREIISPVVVVPISLAEDRIFDPLEDVYFLQNHAEDGFAYGYNDAEEDEP 120

Query: 121 ------EDETDDDDDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTK 180
                 +D+ DDD+DE DLDDELVPWSVSDKLGRQRMRKLGKRGFT+MYNSKRSPFLFTK
Sbjct: 121 DKDDDDDDDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTK 180

Query: 181 PGCVRGKHGLGLKHSY 187
           PGCVRGKHGLGLKHSY
Sbjct: 181 PGCVRGKHGLGLKHSY 196

[Close]

BLAST of HG10005739 vs. ExPASy TrEMBL
Match: A0A0A0K4F3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004150 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 6.0e-87
Identity = 170/187 (90.91%), Postives = 175/187 (93.58%), Query Frame = 0


Query: 1   MAAISG-SSSSSSSLEFVFYDDFEYEFVEEIERLSNWELLDAFDADSEMDGNGGEEQGQN 60
           M AISG SSSSSSS+EFVFYDDFEYEFVE+IERLSNWELLDAFDADSEM GNGGEEQG N
Sbjct: 1   MEAISGSSSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGGN 60

Query: 61  CSVVARVHEDLREMISPVLAVPISLVEDRIDGSLEDVYFLQNQAEDGFAYGYNDAQEEDE 120
           CSV   V +DLREMISPVLAVPISLVEDRID SLED YFL NQAEDGFAYGYNDA+EEDE
Sbjct: 61  CSVDDNVSQDLREMISPVLAVPISLVEDRIDCSLEDAYFLHNQAEDGFAYGYNDAEEEDE 120

Query: 121 TDDDDDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHG 180
            DDD+DEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHG
Sbjct: 121 VDDDEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHG 180

Query: 181 LGLKHSY 187
           LGLKHSY
Sbjct: 181 LGLKHSY 187

[Close]

BLAST of HG10005739 vs. ExPASy TrEMBL
Match: A0A5A7SRG7 (Nuclear polyadenylated RNA-binding protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00680 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.1e-83
Identity = 166/187 (88.77%), Postives = 174/187 (93.05%), Query Frame = 0


Query: 1   MAAISGSSSSSSSLEFVFYDDFEYEFVEEIERLSNWELLDAFDADSEMDGNGGEEQGQNC 60
           M A+SG SSSSSS+EFVFYDDFEYEFVE+IERLSNWELLDAFDADSEM GNGGEEQG+N 
Sbjct: 1   MEAVSG-SSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENY 60

Query: 61  SVVARVHEDLREMISPVLAVPISLVEDRIDGSLEDVYFLQNQAEDGFAYGYNDAQEEDET 120
           SV   V +DLREMISPVLAVPISLVEDRIDGSLED  FL NQAEDGFAYGY+DA+EEDE 
Sbjct: 61  SVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHNQAEDGFAYGYDDAEEEDEV 120

Query: 121 DDD-DDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHG 180
           DDD +DEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHG
Sbjct: 121 DDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHG 180

Query: 181 LGLKHSY 187
           LGLKHSY
Sbjct: 181 LGLKHSY 186

[Close]

BLAST of HG10005739 vs. ExPASy TrEMBL
Match: A0A1S3BJG2 (uncharacterized protein LOC103490356 OS=Cucumis melo OX=3656 GN=LOC103490356 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 5.2e-83
Identity = 163/183 (89.07%), Postives = 171/183 (93.44%), Query Frame = 0


Query: 5   SGSSSSSSSLEFVFYDDFEYEFVEEIERLSNWELLDAFDADSEMDGNGGEEQGQNCSVVA 64
           S SSSSSSS+EFVFYDDFEYEFVE+IERLSNWELLDAFDADSEM GNGGEEQG+N SV  
Sbjct: 12  SSSSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYSVDD 71

Query: 65  RVHEDLREMISPVLAVPISLVEDRIDGSLEDVYFLQNQAEDGFAYGYNDAQEEDETDD-D 124
            V +DLREMISPVLAVPISLVEDRIDGSLED  FL NQAEDGFAYGY+DA+EEDE DD +
Sbjct: 72  NVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHNQAEDGFAYGYDDAEEEDEVDDEE 131

Query: 125 DDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLK 184
           +DEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLK
Sbjct: 132 EDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLK 191

Query: 185 HSY 187
           HSY
Sbjct: 192 HSY 194

[Close]

BLAST of HG10005739 vs. ExPASy TrEMBL
Match: A0A6J1I004 (uncharacterized protein LOC111468462 OS=Cucurbita maxima OX=3661 GN=LOC111468462 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.3e-78
Identity = 157/191 (82.20%), Postives = 168/191 (87.96%), Query Frame = 0


Query: 3   AISGSSSSSSSLEFVFYDDFEYEFVEEIERLSNWELLDAFDADSEMDGNGGEEQGQNCSV 62
           A S SSSSSSS+EF FYDDFEYEFVE++ERLSNWE L+A DADSEMDGNGGE++G+NC V
Sbjct: 7   ASSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKEGKNCCV 66

Query: 63  VARVHEDLREMISPVLAVPISLVEDRIDGSLEDVYFLQNQAEDGFAYGYNDAQEEDET-- 122
           VAR+ EDL EMISPV+ VPISL EDRI   LEDVYFLQN AEDGFAYGYNDA EEDET  
Sbjct: 67  VARIPEDLLEMISPVVVVPISLAEDRIFDPLEDVYFLQNHAEDGFAYGYNDA-EEDETDK 126

Query: 123 -----DDDDDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVR 182
                DDD+DE DLDDELVPWSVSDKLGRQRMRKLGKRGFT+MYNSKRSPFLFTKPGCVR
Sbjct: 127 DDGDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVR 186

Query: 183 GKHGLGLKHSY 187
           GKHGLGLKHSY
Sbjct: 187 GKHGLGLKHSY 196

[Close]

BLAST of HG10005739 vs. ExPASy TrEMBL
Match: A0A6J1I229 (NAD-dependent protein deacetylase HST1-like OS=Cucurbita maxima OX=3661 GN=LOC111470188 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 8.4e-65
Identity = 143/201 (71.14%), Postives = 161/201 (80.10%), Query Frame = 0


Query: 1   MAAISG---SSSSSSSLEFVFYDDFEYEFVEEIERLSNWELLDAFDADSEMDGNGG---- 60
           M A+SG   SSSSSSS+EFVF+DD EYEFVEE+ERLSNWELLDA DAD E+DGNG     
Sbjct: 1   MEALSGAASSSSSSSSVEFVFHDDLEYEFVEEVERLSNWELLDASDADFEIDGNGDEREE 60

Query: 61  --EEQGQNCSVVARVHEDLREMISPVLAVPI-SLVEDRIDGSLEDVYFLQNQAEDGFAYG 120
             EE+ +NCSV   V +DLR     V+A+PI SLVE+RIDG  +DVY LQNQ EDGFAYG
Sbjct: 61  EEEEEAENCSVDVLVPKDLRG--KRVVAMPISSLVEERIDGPFDDVYLLQNQVEDGFAYG 120

Query: 121 YNDAQEED------ETDDDDDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRS 180
            N+ +E++      + DDD DE DLDDELVPWSVSDKLGRQRMRKLGKRGFT+MYNSKRS
Sbjct: 121 CNNLEEDESDDDVVDDDDDGDECDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRS 180

Query: 181 PFLFTKPGCVRGKHGLGLKHS 186
           PFLFTKPGCVRGKHGLGLKHS
Sbjct: 181 PFLFTKPGCVRGKHGLGLKHS 199

[Close]

BLAST of HG10005739 vs. TAIR 10
Match: AT4G34630.1 (unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 86.3 bits (212), Expect = 2.9e-17
Identity = 48/78 (61.54%), Postives = 57/78 (73.08%), Query Frame = 0


Query: 106 GFAYGYNDAQEEDETDDDDDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSP 165
           G  YG +   + +E  + DD +DLD+ELVP SVS K+GRQRMRKLGKR   K+Y SK SP
Sbjct: 121 GITYGDSVNDDGEEDREYDDSYDLDEELVPRSVSKKVGRQRMRKLGKRAIAKVYASKISP 180

Query: 166 FLFTKPGCVRGKHGLGLK 184
           FL  KPG VRGKHGLG+K
Sbjct: 181 FL--KPGIVRGKHGLGMK 196

[Close]

BLAST of HG10005739 vs. TAIR 10
Match: AT5G48420.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 9.6e-05
Identity = 38/102 (37.25%), Postives = 51/102 (50.00%), Query Frame = 0


Query: 87  DRIDGS--LEDVYFLQNQAEDGFAYGYN-DAQEEDETDDDDDEFDLDDELVPWSVSDKLG 146
           DR+DG      +  L   +      G N D  + DE DD D   DLDD+       + + 
Sbjct: 44  DRVDGGCICSRMVSLCEDSRYSVKDGINRDGYDTDEEDDFDYYDDLDDD------HELVK 103

Query: 147 RQRMRKLGKRGFTKMYNSKRSPFLFT--KPGCVRGKHGLGLK 184
            QR+RK GKR F K    K+  + ++  KPGCV GKHGL +K
Sbjct: 104 IQRIRKTGKRTFWKNVTLKKKKYSYSQLKPGCVHGKHGLDIK 139

The following BLAST results are available for this feature:

BLAST of HG10005739 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658549.2	1.2e-86	90.91	uncharacterized protein LOC101212092 [Cucumis sativus] >KAE8645645.1 hypothetica...	[more]
KAA0033784.1	2.2e-83	88.77	nuclear polyadenylated RNA-binding protein 3-like [Cucumis melo var. makuwa] >TY...	[more]
XP_008448068.1	1.1e-82	89.07	PREDICTED: uncharacterized protein LOC103490356 [Cucumis melo]	[more]
XP_038886897.1	2.5e-79	85.79	uncharacterized protein LOC120077100 [Benincasa hispida]	[more]
XP_023553634.1	2.1e-78	79.59	histone H2A.Z-specific chaperone CHZ1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10005739 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10005739 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4F3	6.0e-87	90.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004150 PE=4 SV=1	[more]
A0A5A7SRG7	1.1e-83	88.77	Nuclear polyadenylated RNA-binding protein 3-like OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3BJG2	5.2e-83	89.07	uncharacterized protein LOC103490356 OS=Cucumis melo OX=3656 GN=LOC103490356 PE=...	[more]
A0A6J1I004	2.3e-78	82.20	uncharacterized protein LOC111468462 OS=Cucurbita maxima OX=3661 GN=LOC111468462...	[more]
A0A6J1I229	8.4e-65	71.14	NAD-dependent protein deacetylase HST1-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of HG10005739 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34630.1	2.9e-17	61.54	unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bac...	[more]
AT5G48420.1	9.6e-05	37.25	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR48213	VID27-LIKE PROTEIN	coord: 21..186

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005739.1	HG10005739.1	mRNA