HG10005686 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATTTCGTCATCTTCTCCGACGGTCTTCAGTTCCGAAGGGCTATTGTGCAGTCTATGTTGGAGAGAATCAAAAGAAGCGGTTCGTGATTCCAGTAACTTACTTAAATCAACCATGTATACAAGATTTGCTTAGTCAAGTTACAGAAGAATTTGATTACTATCATCCAATGGGTGGTCTCACATTTCACTGCAAAGATGATATCTTCACTGATCTAATCTCTCAGTTAAACCAACAACTATGA ATGGGATTTCGTCATCTTCTCCGACGGTCTTCAGTTCCGAAGGGCTATTGTGCAGTCTATGTTGGAGAGAATCAAAAGAAGCGGTTCGTGATTCCAGTAACTTACTTAAATCAACCATGTATACAAGATTTGCTTAGTCAAGTTACAGAAGAATTTGATTACTATCATCCAATGGGTGGTCTCACATTTCACTGCAAAGATGATATCTTCACTGATCTAATCTCTCAGTTAAACCAACAACTATGA ATGGGATTTCGTCATCTTCTCCGACGGTCTTCAGTTCCGAAGGGCTATTGTGCAGTCTATGTTGGAGAGAATCAAAAGAAGCGGTTCGTGATTCCAGTAACTTACTTAAATCAACCATGTATACAAGATTTGCTTAGTCAAGTTACAGAAGAATTTGATTACTATCATCCAATGGGTGGTCTCACATTTCACTGCAAAGATGATATCTTCACTGATCTAATCTCTCAGTTAAACCAACAACTATGA MGFRHLLRRSSVPKGYCAVYVGENQKKRFVIPVTYLNQPCIQDLLSQVTEEFDYYHPMGGLTFHCKDDIFTDLISQLNQQL Homology
BLAST of HG10005686 vs. NCBI nr
Match: KAE8645661.1 (hypothetical protein Csa_020412 [Cucumis sativus]) HSP 1 Score: 143.7 bits (361), Expect = 7.1e-31 Identity = 64/78 (82.05%), Postives = 70/78 (89.74%), Query Frame = 0
BLAST of HG10005686 vs. NCBI nr
Match: XP_022136192.1 (auxin-responsive protein SAUR24-like [Momordica charantia]) HSP 1 Score: 136.7 bits (343), Expect = 8.7e-29 Identity = 62/82 (75.61%), Postives = 70/82 (85.37%), Query Frame = 0
BLAST of HG10005686 vs. NCBI nr
Match: XP_011658582.1 (auxin-responsive protein SAUR24 [Cucumis sativus]) HSP 1 Score: 130.2 bits (326), Expect = 8.1e-27 Identity = 58/78 (74.36%), Postives = 68/78 (87.18%), Query Frame = 0
BLAST of HG10005686 vs. NCBI nr
Match: KAE8645660.1 (hypothetical protein Csa_020551 [Cucumis sativus]) HSP 1 Score: 129.4 bits (324), Expect = 1.4e-26 Identity = 58/80 (72.50%), Postives = 68/80 (85.00%), Query Frame = 0
BLAST of HG10005686 vs. NCBI nr
Match: KAG6572089.1 (Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 127.9 bits (320), Expect = 4.0e-26 Identity = 62/88 (70.45%), Postives = 67/88 (76.14%), Query Frame = 0
BLAST of HG10005686 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.0e-19 Identity = 47/77 (61.04%), Postives = 54/77 (70.13%), Query Frame = 0
BLAST of HG10005686 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 6.5e-19 Identity = 45/68 (66.18%), Postives = 51/68 (75.00%), Query Frame = 0
BLAST of HG10005686 vs. ExPASy Swiss-Prot
Match: Q41220 (Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 1.9e-18 Identity = 44/81 (54.32%), Postives = 59/81 (72.84%), Query Frame = 0
BLAST of HG10005686 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 2.5e-18 Identity = 43/82 (52.44%), Postives = 59/82 (71.95%), Query Frame = 0
BLAST of HG10005686 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 5.5e-18 Identity = 41/84 (48.81%), Postives = 59/84 (70.24%), Query Frame = 0
BLAST of HG10005686 vs. ExPASy TrEMBL
Match: A0A0A0K5V1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009120 PE=3 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 4.8e-33 Identity = 70/90 (77.78%), Postives = 74/90 (82.22%), Query Frame = 0
BLAST of HG10005686 vs. ExPASy TrEMBL
Match: A0A6J1C4W2 (auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111007947 PE=3 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 4.2e-29 Identity = 62/82 (75.61%), Postives = 70/82 (85.37%), Query Frame = 0
BLAST of HG10005686 vs. ExPASy TrEMBL
Match: A0A0A0K4K1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009080 PE=3 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 4.7e-28 Identity = 60/82 (73.17%), Postives = 68/82 (82.93%), Query Frame = 0
BLAST of HG10005686 vs. ExPASy TrEMBL
Match: A0A0A0K5U4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009070 PE=3 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 3.9e-27 Identity = 58/78 (74.36%), Postives = 68/78 (87.18%), Query Frame = 0
BLAST of HG10005686 vs. ExPASy TrEMBL
Match: A0A5D3CL76 (Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001100 PE=3 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 2.6e-26 Identity = 62/85 (72.94%), Postives = 67/85 (78.82%), Query Frame = 0
BLAST of HG10005686 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 95.1 bits (235), Expect = 2.7e-20 Identity = 42/67 (62.69%), Postives = 50/67 (74.63%), Query Frame = 0
BLAST of HG10005686 vs. TAIR 10
Match: AT4G38850.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 92.8 bits (229), Expect = 1.3e-19 Identity = 44/81 (54.32%), Postives = 59/81 (72.84%), Query Frame = 0
BLAST of HG10005686 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 92.4 bits (228), Expect = 1.8e-19 Identity = 43/82 (52.44%), Postives = 59/82 (71.95%), Query Frame = 0
BLAST of HG10005686 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 91.3 bits (225), Expect = 3.9e-19 Identity = 42/75 (56.00%), Postives = 53/75 (70.67%), Query Frame = 0
BLAST of HG10005686 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 91.3 bits (225), Expect = 3.9e-19 Identity = 41/84 (48.81%), Postives = 59/84 (70.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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