HG10005607 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10005607
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr07: 4078244 .. 4079642 (-)
RNA-Seq ExpressionHG10005607
SyntenyHG10005607
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACCCTTCGCGAATCAAACGAAGTTATTGACTCCTTCAATCCTTTCCATGCGGATAAAGCCCTTATCACTGTTAAGGATGCTGATGAAGCTCGTTTGCTCTGTAAGAACAAAGGATGGGTCACGGTAGGAACACACACTGTAAAATTTGAAGAATGGTCTTATACAAAGCACTCAACACCTAAATTCATCCCCAGCTATGGCGGTTGGCTTCGTTTTAGAGGCATCCCCTTGATGGATTGGAATGAACACACTTTCTGAAAGATCGGTGAAGCGTGTGGAGGTTTCATATATGTTGGAGCAACTACATGGCTGAAGCTTGACCTAATCGAAGCTCACATAAAGGTCCGACAAAACTATTGTGGGTTTGTTCCAGCAGCCATACGTATCGATAACCAAGAGGAAAAAAATTTATAGTCCACACAGTAACGCCGAAAAATGAAAAATGGTTCACCGGAAAACATCCGATGATACATGGATCCTTCACCAGAGAGGCTACCATGCACTGTGATCTATCCAATCCTTTGTCAGAAGCATTATTTTTCCAAGAAAACATTGCTACTCCACCTGCACAAGAAAAAGAAAAATCTAGCAGCGATATGACAATACAAGAGAATGAAGAGAGAAATCGAAAAGGGAAGATGATAGCTGAAGATGATGAACAGAACATTCCTGAAAAGGTGCAACAGCTATCTGCCCTAATGCGAAAAAAGGTCAGTTTCCCCTCCCCAAAAATAAAGTATTATATTATAATACCAAATCTGCTCCAGCAAACATATTGACAGACAGACCCAACATTGAAAAGGTCGCGTCAGCCCAAAAAGAGTCCACTTTGCAAATTCATAAGCCCAACTGAAATGAGAAAAAGTTTTATGGAAGCAGCCCATTGAATTCGCAGCATACACACAACCCTAACAATAGCCCGAGTTGTAGGGACGGAAGGGATTCTCCTAACAAGCAAACTATAATGAAGGAAAAAGAAAAGACAACTGAAATTTTCAAAATAGGGAAAATTCAAATTACTACATCAACCACCAATGTGGAACAGGCCGTAGTTCATGAGATAGAGGAGCTATATGTCGATCTGGGGGACATCCCTCAAATTGCAGAAACGCTTGTATCCAGCCTAGAAGCATCTCCCAACTCAATGATGAATGACATAATTGAGGAGACTATGGAGAACAACAACACAAAAGATGTCGATGGAACTTGCCAACAGAAATTGTTCACAGAAAGTGAATGTGAAGGAAGGGATGCTATAAGAAGCGATGATATAGAACCAGAGCGGACGGATGCCAATAATCAGATTGAGAACTTTGAATCATTTAAAGATCAGCTTCACAAATGGCTTGCAGAAAAACAACTTTTGTATCATCATGATGCTAGACCGAAGTAA

mRNA sequence

ATGGAAACCCTTCGCGAATCAAACGAAGTTATTGACTCCTTCAATCCTTTCCATGCGGATAAAGCCCTTATCACTGTTAAGGATGCTGATGAAGCTCGTTTGCTCTTCCACACAGTAACGCCGAAAAATGAAAAATGGTTCACCGGAAAACATCCGATGATACATGGATCCTTCACCAGAGAGGCTACCATGCACTGTGATCTATCCAATCCTTTGTCAGAAGCATTATTTTTCCAAGAAAACATTGCTACTCCACCTGCACAAGAAAAAGAAAAATCTAGCAGCGATATGACAATACAAGAGAATGAAGAGAGAAATCGAAAAGGGAAGATGATAGCTGAAGATGATGAACAGAACATTCCTGAAAAGGTGCAACAGCTATCTGCCCTAATGCGAAAAAAGCATACACACAACCCTAACAATAGCCCGAGTTGTAGGGACGGAAGGGATTCTCCTAACAAGCAAACTATAATGAAGGAAAAAGAAAAGACAACTGAAATTTTCAAAATAGGGAAAATTCAAATTACTACATCAACCACCAATGTGGAACAGGCCGTAGTTCATGAGATAGAGGAGCTATATGTCGATCTGGGGGACATCCCTCAAATTGCAGAAACGCTTGTATCCAGCCTAGAAGCATCTCCCAACTCAATGATGAATGACATAATTGAGGAGACTATGGAGAACAACAACACAAAAGATGTCGATGGAACTTGCCAACAGAAATTGTTCACAGAAAGTGAATGTGAAGGAAGGGATGCTATAAGAAGCGATGATATAGAACCAGAGCGGACGGATGCCAATAATCAGATTGAGAACTTTGAATCATTTAAAGATCAGCTTCACAAATGGCTTGCAGAAAAACAACTTTTGTATCATCATGATGCTAGACCGAAGTAA

Coding sequence (CDS)

ATGGAAACCCTTCGCGAATCAAACGAAGTTATTGACTCCTTCAATCCTTTCCATGCGGATAAAGCCCTTATCACTGTTAAGGATGCTGATGAAGCTCGTTTGCTCTTCCACACAGTAACGCCGAAAAATGAAAAATGGTTCACCGGAAAACATCCGATGATACATGGATCCTTCACCAGAGAGGCTACCATGCACTGTGATCTATCCAATCCTTTGTCAGAAGCATTATTTTTCCAAGAAAACATTGCTACTCCACCTGCACAAGAAAAAGAAAAATCTAGCAGCGATATGACAATACAAGAGAATGAAGAGAGAAATCGAAAAGGGAAGATGATAGCTGAAGATGATGAACAGAACATTCCTGAAAAGGTGCAACAGCTATCTGCCCTAATGCGAAAAAAGCATACACACAACCCTAACAATAGCCCGAGTTGTAGGGACGGAAGGGATTCTCCTAACAAGCAAACTATAATGAAGGAAAAAGAAAAGACAACTGAAATTTTCAAAATAGGGAAAATTCAAATTACTACATCAACCACCAATGTGGAACAGGCCGTAGTTCATGAGATAGAGGAGCTATATGTCGATCTGGGGGACATCCCTCAAATTGCAGAAACGCTTGTATCCAGCCTAGAAGCATCTCCCAACTCAATGATGAATGACATAATTGAGGAGACTATGGAGAACAACAACACAAAAGATGTCGATGGAACTTGCCAACAGAAATTGTTCACAGAAAGTGAATGTGAAGGAAGGGATGCTATAAGAAGCGATGATATAGAACCAGAGCGGACGGATGCCAATAATCAGATTGAGAACTTTGAATCATTTAAAGATCAGCTTCACAAATGGCTTGCAGAAAAACAACTTTTGTATCATCATGATGCTAGACCGAAGTAA

Protein sequence

METLRESNEVIDSFNPFHADKALITVKDADEARLLFHTVTPKNEKWFTGKHPMIHGSFTREATMHCDLSNPLSEALFFQENIATPPAQEKEKSSSDMTIQENEERNRKGKMIAEDDEQNIPEKVQQLSALMRKKHTHNPNNSPSCRDGRDSPNKQTIMKEKEKTTEIFKIGKIQITTSTTNVEQAVVHEIEELYVDLGDIPQIAETLVSSLEASPNSMMNDIIEETMENNNTKDVDGTCQQKLFTESECEGRDAIRSDDIEPERTDANNQIENFESFKDQLHKWLAEKQLLYHHDARPK
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..151

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10005607.1HG10005607.1mRNA