HG10005542 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005542
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Pectin lyase-like superfamily protein
Location	Chr07: 3477185 .. 3483789 (+)
RNA-Seq Expression	HG10005542
Synteny	HG10005542

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTGAGAATTAAGGCAGTGGTGGATAAATTCGTGGAGGAGCTTAAGGAAGCACTGGATGCGGACATTCAAGATCGAATCATGAAGGAGAGAGAGATGCAGAGTTACATTGAAGAGCGCGAACGTGAGGTTGCTGAACGTGAAGCTGCTTGGAAAGCTGAGCTCTCCCGTCGCGAGGTGATCGATTGAATTCTCTTTATTTCTCTGTATTTTTGTTAGTTAGGACTGCTTAATTGGAAATTACTGGTGAATTTTAATGGATATGTATGCACATTTCTATGGCTCACGCGATGTTTAATTAAGAAAAGTATCCAGTCTTTGTCACTGAGTTTATGGATGTTAATGTAATCTGGAAATGAAGACTTTTGTTACTAAATCTTACCATTTCTTAATTGATATTTTTTAGCGTTGTTCATAGCTTAATTAGTTGGGCAGAATTCTTGATGGTGCTTTCGTAGTTAAGTTATAAATTGGTCCTGTTGTGTTAGAATTTTCAGTTAAAAAATAAGATGGGAGCTCATGTGTGGTTGGATGCCTTTCTGTTATCAATTCAAATTAAGCATTGCATCTTCTTTATTTCTTCCCCTGCCGTGTGGCTCTTACCTTTTGGGTAGTCAAATGCTTGGACTTCACCAGGCATTACTGCTTGAGTTTTACGATGCCCATTTCATTTGTTCGTTGTCTTCATATTTTTCTCCAAATCTAGGAAGAAAATACTATGGGGGATGATAAGTTCCCATGGGATGTTTGACATATGGTTTTTATGAGTTGGGTATCTTGGGTTTGTGGAATCTGGAGTTTGATAGTTCGAGTTCATGTTAAGGTACAAGCTATAGATTCATGGGTTTGGTTTGTAGGCTTTTAGGTTTATAGGTTTATGATCGACATAAATTAGAAACCATTAAGATTAGTGACCCTGTAGTTCAGGACAAGATAGATTTAGTTTCTTAACTTCAGGCTGTATAAAGCTGACAGGTAAATCAAACAAACGAACTCAGAATTTTTATTCCTTAAGCGTAAGTTTCTTTTCATTCTTTTAATGAAAAGTTTCATTTCTCGTAGAAAAAGGAAAACAAGAAACAAACAATTCTATTAGTTAATGGTACAGCACAGCAGAGTTCATTCAGCTCTAGCCAGGCAAGTAAGTTGGCAACATTCACATAGATTATCTTGCCTTCAAGTCAGACGAGTTAGGTGCGGAAGAACTCGAGTTACCGAATAGCAGATATACTGTACTGATTATATCAAGTGGACATTAAGGGAGTGTTTGGGCCCCAACTTAAAGTGGATGGAGTGGGTTATTATGACCCACTTCACGTTTGGTGCTCCAATTATAATAGTTGATGTTTCCAACTATCATAACTTACCATTAACTACAACATTACTATTTCAAATCCCTCTTTGTCATAGTGTTTACTATTTCCTACTCATTCTCTCTTTCCCTCTTTAATATGGTGTTTACTATTTCCTACTTAGACTAAGTCACTAAAATAGTCTGCACCTTAAACACAGTCTATTATAACCCATACCATAATAGTCTGCACCCCAAGTATAGACTATTATAACCTACAAACTATAATAACGAACTCAGTACCCTAAACACCCCTCAACACCCCTTAATCAGTGAAATAACTATTGAAGTAAAGATGAGCTTGGCTTTTTCTTTTATTATCATATTCTAAATTCATAATGTTTTTTCACCCCTTTTTTCTGCTTAAATCAATTGACCCAGCATTCATCCAGAAAGAAGAGTTCTTTTACATCATGTTTTGATTATTTGTTCTTGCCCCCTCCCTCTTTTAGGCAGAGATTGCAAGACAAGAAGCAAGGTTGAAGATGGAGAAGGAAAATCTGGAAAAGGAGAAAAGTGTGCTAATGGGAACTGCATCAAATCAAGATAATCAAGATGGAGCTCTTGAAATTACTGTAAGTGGTGAAAAGTACAGATGCCTCAGGTTTGCAAAGGCTAAAAAATGAGGCTCACATAATGATATGATAGTGAAAAAGGAAAAAAAAAAAAAAAAAAAAGGGTAGTGTCTTGTTTGTTGCCTCTTCTTCCTCTTAAGCTTGTTATAATTTCTTCTTTCCCAAAGCAAAATCATTATTAGTGTTGAAAGCTTCTAAGATGTACATGTAGGTAATTATTTGCTACATTATCATGATGCTAGCAGTATATATTAATCATTCCATTTCATTTATTTAATGAATGAATGAATGAATCTCCATCTCACCAAGAGAGAGTTTTGTCTTTTCTTTTCTCCCTCTTTTTGTAAGAAAATGTATAAAGTCTGACCACAGGTTTTACTAACACAAGTAACATCCTCAATCCAAAATGAGAACAATTATTCAATGAGGCGGTTACGTTCTTTCGTGCCTGCCTTATAATATCAGGTGGATATGGATTTTAGAATTTGCATGTTCTGCAACAACCACTAGATAGAGTCAAAACGAGCATACAATTGACATAAATGTGTTAGTGAGTATGAGATTTGTGGTTCGGATCTCCTACGCCTATTATATTAAAAAAAAAAAAATCACGAGATACAAATCTAAGATACCTTTATAGTTTCTCTCTCATATACGGTGTAAAACTGACAACTACACAACTCCAAAAGGAGAGGGGTTAACTAGAAAAAGGAGAGCTTAAGTTGTGATAATTTATGTGTTGTGCAAATATTGAAAAAAGATATATGAAACTGGCAACTACCTATGAATATATGAAAATATTGACATGTCAATGAATTTTTTTAATACAATTTGGCCTCTATAATTAAAAAAGTTTCAATTTGAAACCATTTAGTCAAATCAAAGACGAATATACTTAGGTCAAGAAGCTTGAGTTCCCATCGTCTTTAAAAGATTTTATATTATTGTTCATTTGATCGATTGAGTTTGGATTCTAATTTCACGACATAAAGGCTTTAACGTTTTTCGTTTTATATAAAAGCAATATATTAGATGCATCATGGCTTTACCCATAGAAAAAAGAAGAGTTTGCCACGTGCCAATTAGGCAAGCTACAAAAAGATTTGTGCAACCAATATTTTTCTTTATATAAGATACTAATATTTTCTATTGATATAGAAACATACAATTTGTTATTAGTAACAAAATTAATATAGATTGAATTCATTCGTACGAATAAATTTATACCTCTAATCTTTAGGCCGAAGTTAATATATTTCAATTAGTTGAGTTAAATTTGGCAACCAAATTTATCATAGGCTAAATTATAAAAAAAAAATGCATTTAAACTTTATCATTTGTTTAAAAAATACCCCTATGCTTTCAAAAGGTTACAACATTACCCCTAAACTTTCACAAATGTTTCAAAAGTACCATTGGAGTATAAGTCTTTAGAATTTTGGACAAAAATTGAGATATAAATTGATATGGTTGCGGTCTAAAAAAATTTTAGATCACTACACTGTTTTAGGTCATTATTACACCGTTCTAAATCTCGCTTTTGTTCGAAATTCTAAAGAATTTTTTTTTCAAGGATAGTTTTGAAACATTTATGAAAGTTAAAGAACAATATCGTAACTTTTACAAATATACCAATATTTTTTAAACAAAGAGCAAAGTTTAAGAGTATTCATTATAATTTAGTTGTTTTTTTCTTTAGCCAACAACAAGACACGCTACAAGAGACTCAAACCAGGCAGGGTAAGGAGAATAAAGAAGAGATGACACATTTTCTTCCAACGCCTTGGAAGCCAACAAATTAGCCATTAAATTATTCAAACGACGAGCATGGATAAAGGAAACGTTACCCAAATTCAACGCAAGAACCTTAGTCCCTTTTATGAAGAATGAGACTTCAGTAAGATTCGAAGAGACCGCATTAGGTAGATTAACAATCTCCAAGTAATTCGACTCAACAATGACAGGCCGAACATTGATAGAGGAAATACTAAGAAGGCCTTCACTGATAGCTAATGCTTCAACGAGTTTGACTTCGTTACATCTTTAGCCGAACTTACAGCTAGTAAGACACGCGCGACCCAAATGGTCCCGAAGCACCCAACCCAACCGATCGTTTCAATGATCAAGACTCCAACAGCATCAATGAGTATTCATTATATTTAGCTAATTTATGAGTATTAATTATAATTTAGCTTTTTATCATATAAAGATGAAAGAAAGCAAGAATGAATATATATAACAAGAATCTTCCATTTTGCATGATCCAACAAGCATCATGTTCATGACTCCCAACCCACACGATCTCTCTCTCCAGTTCTTTCAACTAAGGCTCTCTCAACCTTCGCTTCGCCGGTCCGGCGGTCCGACGAGCTTCCGGTCGCCGTGCAGCAGCGGCTGATTTATTTCTCTTTTCCATGTGTGCGACGGTTAACAACCAGAGACTTAGTGGGGGGAAAGGAGTTAGCGACAGTTAACAATGGCGAATTCAAAATCGCCCCCATTTTCTCAGCATCTCCGATTGCAAATTTAAACTCAAATACCGTTCCATTCATGAACCGGTAAGCTAAAACAATCTCTTCCGATTTCAATTTCACCGAGCAGAAGCAAAGCTTGATAAGCTATTAGCATGAATTTCCCCTTTCACACCACACTGTTTTTGGTGCTCTCGTCTTCCTGTTTTAGCTCAGTTCTTAGTAGAGGAATATTGGAAGCAGACGTTTCAGGAAGCTTATTGCGTTATAGAACTAAGAGTTCTCATGTTTTCAGTGTTAGAAGCTTTGGTGCTCGAGCAAATGGCTTAACTGATGATAGCAATGTCTGTTCTGTGTTTGTTTGTGTTGCTTCTTTTGTGAAAATTGTTTGAGATTTTACTTGGTGAACTGAATTCCTTAAGCTCTGTTTCTCCCTTCAACTGTTGAGACTCTTCTCTGCTGCAATTTCTTGTGTACTTTTTTTTCCCTTTCCATTTTTTGTGCCATTTCTTTAGCTCACAAGAAAGGATAACTTTGTTTGGAATTTTATTACACACATTTTTCAAGGATTTCCATGAATCTGTCCTTTTGTGTTTTCTAGTTGTCCACTCATATTTAGAATTGTTCAGTCAGATGTTTTCTGTTACTACTTAGCCAAATTTCTTGCTTGCAGGAAATGAAAATCCACTTTCCTTACAAATGGCGAGTTTGATACGTGTTTGGGACTAGTAAAAAGTGTTTAATGATTAATTACTTTATGTTTGTTTTTCCTAACAATCACAGGGTTTAAAAGTACTATATATGTGCTTTCTCATATAACAATTTGACTCTTTTTAAAATCGACAATATATAGCTTTCAAACATGATGAATTTGAGTAGGAAGTGATTTTGGTCCGGCCAAAAAAGTTCTCAAACACACCCTTTACAAGAGTGAAAAGATTAAGATCACTTTTCAAAAGTTTTCACTTGCTTGTGATTCAGGCCTTCTTAGCAGCATGGAGGATGGCCTGTGGTTCAGCTGGAGCGGTAACTTTCCTGATTCCAAAGGGAACGTATTTGGTTGGTCCAGTTAAATTTTCTGGCCCTTGCAAAAATGTGTCATCTCTAACAGTTAAAATGAAGGCAAGGGTCTAGTCTTCTTCTTCTTTTGGCTTTTTTTGTTGAATTTGTTTGGTTTGAGCTTGAATTTCCTTTTGCAGGGCTATTTGAAGGCATCAACAGACCTGTCGAAATATGGTTCTGGTGCAGGCTGGATTGAGTTCAGATGGATGGAGGGGCTAACCTTGACTGGAGGTGGAACCTTCGATGGTCGAGGCGCCGAGGCATGGCCATTCAACAACTGCCTTGATGACTACAATTGCAAACTCCTTCCTACTGTAAATTCCATACCACATTTTGTTCTGTTTGATTTCTAACCAATGCATGTCTTAAAACATTAGAAATTGTAAGAACTGTTCTAATTCTGCCATTTGAAGCATTAGTGAAATTATTTCAATGAACCATTTCGAACTCATGTCTTGAAACATTAGGAATTGCAAGAATGTTCTACTACTTCCATTTGAAGCATTAGTAAGATTAATAATACAAATCATTTCAAATTCATGTCTTGAAAGTTAAAACATTAGGACTTCCAAGAAACTTTATATTGCTGCCATTTGAAACATCAGTAAGATTCTTACAATGAACCATTTCAAACTCATGTCTTGAAACATTAGTATTTCAAAAACTGTTTTGTTGCTGCCATTTGAAACGTCAATTAAAATCTTAAAATGAGTGATTTCAAACTCATGTCTTGAAACATTACAAATTGCAAAACTGTTCTGTCGCTGCCATTTGAAACAGCAGTAAGATTCTTATAATGACTCATTTCTTTTTCAGAACTTGAAATTTGTGGCTATGAATAACACGGTTGTTCAACACATAACTTCGCTAAACAGCAAGTTCTTTCACCTGGCTTTAGTACAATGCAAGAGGTTCAGAGGTAGCAAACTTATGATTTCAGCTCCGGCAAATAGTCCCAACACCGACGGCATCCACATTGACCGAAGTTCTAACGTCCATCTTTCTCGATCACATATTCAAACTGGTGACGACTGCATATCCATCGGACAAGGGAACTCTCAAGTCACAATCTCCAGCATCAACTGTGGACCAGGCCATGGGATCAGGTACGTAGATTGCTGCCAAAAAGTTTTATCCTTCTGA

mRNA sequence

ATGTCTTTGAGAATTAAGGCAGTGGTGGATAAATTCGTGGAGGAGCTTAAGGAAGCACTGGATGCGGACATTCAAGATCGAATCATGAAGGAGAGAGAGATGCAGAGTTACATTGAAGAGCGCGAACGTGAGGTTGCTGAACGTGAAGCTGCTTGGAAAGCTGAGCTCTCCCGTCGCGAGGCAGAGATTGCAAGACAAGAAGCAAGGTTGAAGATGGAGAAGGAAAATCTGGAAAAGGAGAAAAGTGTGCTAATGGGAACTGCATCAAATCAAGATAATCAAGATGGAGCTCTTGAAATTACTGTAAGTGGTGAAAAGTACAGATGCCTCAGCTCAGTTCTTAGTAGAGGAATATTGGAAGCAGACGTTTCAGGAAGCTTATTGCGTTATAGAACTAAGAGTTCTCATGTTTTCAGTGTTAGAAGCTTTGGTGCTCGAGCAAATGGCTTAACTGATGATAGCAATGCCTTCTTAGCAGCATGGAGGATGGCCTGTGGTTCAGCTGGAGCGGTAACTTTCCTGATTCCAAAGGGAACGTATTTGGTTGGTCCAGTTAAATTTTCTGGCCCTTGCAAAAATGTGTCATCTCTAACAGTTAAAATGAAGGCAAGGGGCTATTTGAAGGCATCAACAGACCTGTCGAAATATGGTTCTGGTGCAGGCTGGATTGAGTTCAGATGGATGGAGGGGCTAACCTTGACTGGAGGTGGAACCTTCGATGGTCGAGGCGCCGAGGCATGGCCATTCAACAACTGCCTTGATGACTACAATTGCAAACTCCTTCCTACTAACTTGAAATTTGTGGCTATGAATAACACGGTTGTTCAACACATAACTTCGCTAAACAGCAAGTTCTTTCACCTGGCTTTAGTACAATGCAAGAGGTTCAGAGGTAGCAAACTTATGATTTCAGCTCCGGCAAATAGTCCCAACACCGACGGCATCCACATTGACCGAAGTTCTAACGTCCATCTTTCTCGATCACATATTCAAACTGGTGACGACTGCATATCCATCGGACAAGGGAACTCTCAAGTCACAATCTCCAGCATCAACTGTGGACCAGGCCATGGGATCAGGTACGTAGATTGCTGCCAAAAAGTTTTATCCTTCTGA

Coding sequence (CDS)

ATGTCTTTGAGAATTAAGGCAGTGGTGGATAAATTCGTGGAGGAGCTTAAGGAAGCACTGGATGCGGACATTCAAGATCGAATCATGAAGGAGAGAGAGATGCAGAGTTACATTGAAGAGCGCGAACGTGAGGTTGCTGAACGTGAAGCTGCTTGGAAAGCTGAGCTCTCCCGTCGCGAGGCAGAGATTGCAAGACAAGAAGCAAGGTTGAAGATGGAGAAGGAAAATCTGGAAAAGGAGAAAAGTGTGCTAATGGGAACTGCATCAAATCAAGATAATCAAGATGGAGCTCTTGAAATTACTGTAAGTGGTGAAAAGTACAGATGCCTCAGCTCAGTTCTTAGTAGAGGAATATTGGAAGCAGACGTTTCAGGAAGCTTATTGCGTTATAGAACTAAGAGTTCTCATGTTTTCAGTGTTAGAAGCTTTGGTGCTCGAGCAAATGGCTTAACTGATGATAGCAATGCCTTCTTAGCAGCATGGAGGATGGCCTGTGGTTCAGCTGGAGCGGTAACTTTCCTGATTCCAAAGGGAACGTATTTGGTTGGTCCAGTTAAATTTTCTGGCCCTTGCAAAAATGTGTCATCTCTAACAGTTAAAATGAAGGCAAGGGGCTATTTGAAGGCATCAACAGACCTGTCGAAATATGGTTCTGGTGCAGGCTGGATTGAGTTCAGATGGATGGAGGGGCTAACCTTGACTGGAGGTGGAACCTTCGATGGTCGAGGCGCCGAGGCATGGCCATTCAACAACTGCCTTGATGACTACAATTGCAAACTCCTTCCTACTAACTTGAAATTTGTGGCTATGAATAACACGGTTGTTCAACACATAACTTCGCTAAACAGCAAGTTCTTTCACCTGGCTTTAGTACAATGCAAGAGGTTCAGAGGTAGCAAACTTATGATTTCAGCTCCGGCAAATAGTCCCAACACCGACGGCATCCACATTGACCGAAGTTCTAACGTCCATCTTTCTCGATCACATATTCAAACTGGTGACGACTGCATATCCATCGGACAAGGGAACTCTCAAGTCACAATCTCCAGCATCAACTGTGGACCAGGCCATGGGATCAGGTACGTAGATTGCTGCCAAAAAGTTTTATCCTTCTGA

Protein sequence

MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLSSVLSRGILEADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGIRYVDCCQKVLSF

Homology

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BLAST of HG10005542 vs. NCBI nr
Match: KAE8645702.1 (hypothetical protein Csa_020363 [Cucumis sativus])

HSP 1 Score: 533.9 bits (1374), Expect = 1.1e-147
Identity = 287/359 (79.94%), Postives = 293/359 (81.62%), Query Frame = 0


Query: 1   MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRE 60
           MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRE
Sbjct: 1   MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRE 60

Query: 61  AEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLSSVLSRGILE 120
           AEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEIT                   
Sbjct: 61  AEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEIT------------------- 120

Query: 121 ADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTY 180
                                              AFLAAWRMAC SAG VTFLIPKGTY
Sbjct: 121 -----------------------------------AFLAAWRMACDSAGVVTFLIPKGTY 180

Query: 181 LVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFD 240
           LVGPV FSGPCKNVSSLTVKM+  GYLKAST+LSKYGSGAGWIEFRWMEGLTL GGGTFD
Sbjct: 181 LVGPVIFSGPCKNVSSLTVKME--GYLKASTNLSKYGSGAGWIEFRWMEGLTLNGGGTFD 240

Query: 241 GRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSK 300
           GRGAEAWPFNNC DDYNCKLLPTNLKFVA+NNTVVQHITSLNSKFFHLALVQCKRF GS+
Sbjct: 241 GRGAEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQHITSLNSKFFHLALVQCKRFVGSE 300

Query: 301 LMISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI 360
           L ISAP NSPNTDGIHIDRSSN+H S SHIQTGDDCISIGQGNSQVTISS+NCGPGHGI
Sbjct: 301 LKISAPENSPNTDGIHIDRSSNIHFSLSHIQTGDDCISIGQGNSQVTISSVNCGPGHGI 303

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BLAST of HG10005542 vs. NCBI nr
Match: KAB5541847.1 (hypothetical protein DKX38_014821 [Salix brachista])

HSP 1 Score: 507.7 bits (1306), Expect = 8.6e-140
Identity = 265/358 (74.02%), Postives = 298/358 (83.24%), Query Frame = 0


Query: 3   LRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAE 62
           +RIKAVVDKFV+ELKEALDADIQDRIMKEREMQSYI+EREREVAEREAAWKAELSRREAE
Sbjct: 1   MRIKAVVDKFVQELKEALDADIQDRIMKEREMQSYIQEREREVAEREAAWKAELSRREAE 60

Query: 63  IARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLSSVLSRGILEAD 122
           IARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEITVSG   +       R IL   
Sbjct: 61  IARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEITVSGADGQGFEVEARRPILH-- 120

Query: 123 VSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLV 182
                     +SS +F V+ FGARA+G TDDS AF+AAW+ AC + G V  L+PKG YL+
Sbjct: 121 ----------RSSLLFDVKRFGARADGRTDDSKAFIAAWKEACRATGKVKLLVPKGVYLI 180

Query: 183 GPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGR 242
           GPVKF+GPCKNVSSLT      GYLKA+  LS+YGSG GW+EF W+E LTLTGGGTFDG+
Sbjct: 181 GPVKFAGPCKNVSSLT------GYLKATAKLSRYGSGTGWVEFGWLERLTLTGGGTFDGQ 240

Query: 243 GAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLM 302
           GA+AWP+NNC  D  CKLLPTN+KFVAMN TVVQ ITSLNSKFFH+ALV+CK F+G+++ 
Sbjct: 241 GAKAWPYNNCTTDSKCKLLPTNVKFVAMNQTVVQGITSLNSKFFHIALVECKNFKGTEIK 300

Query: 303 ISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGIR 361
           ISAPA+SPNTDGIH++RSSNV +SRS I TGDDCISIGQGNSQVTI+ I CGPGHGIR
Sbjct: 301 ISAPADSPNTDGIHVERSSNVCISRSLIGTGDDCISIGQGNSQVTITRIRCGPGHGIR 340

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BLAST of HG10005542 vs. NCBI nr
Match: KAF3434896.1 (hypothetical protein FNV43_RR21983 [Rhamnella rubrinervis])

HSP 1 Score: 486.1 bits (1250), Expect = 2.7e-133
Identity = 262/374 (70.05%), Postives = 294/374 (78.61%), Query Frame = 0


Query: 1   MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRE 60
           MSLRIKAVVDKFV+ELKEALDADIQDRIMKEREMQSYI+EREREVAEREAAWKAELSRRE
Sbjct: 1   MSLRIKAVVDKFVQELKEALDADIQDRIMKEREMQSYIQEREREVAEREAAWKAELSRRE 60

Query: 61  AEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEITVSGEKYR------------ 120
           AEIARQEARLKMEKENLEKEKSVLMGTAS QDNQDGALEIT     +             
Sbjct: 61  AEIARQEARLKMEKENLEKEKSVLMGTASTQDNQDGALEITKGNMSFEFSVKLLLSLSIF 120

Query: 121 CLSSVLSRG----------ILEADVSG--SLLRYRTKSSHVFSVRSFGARANGLTDDSNA 180
           CL  V  RG          +    + G  +LL  + KS   F+V++FGA A+  TD+SNA
Sbjct: 121 CLEDVFGRGRGLLGTTAFCVESTKLQGRRNLLHDKAKSCGRFNVKTFGAVADDRTDNSNA 180

Query: 181 FLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKY 240
           F AAW+ AC S G V  +IP GTYL+GPVKF+GPC  VS LTV+MK  GYLKA+TDL KY
Sbjct: 181 FRAAWKKACNSTGRVNLVIPNGTYLLGPVKFAGPCPKVSYLTVRMK--GYLKATTDLFKY 240

Query: 241 GSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQ 300
           G  +GWIEF WMEGLTLTGGGTFDG+GA AWP+NNC+ D NCKLLPTNLKFVAMN TVV+
Sbjct: 241 GFSSGWIEFGWMEGLTLTGGGTFDGQGAHAWPYNNCITDSNCKLLPTNLKFVAMNKTVVR 300

Query: 301 HITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDC 351
            ITS+NSK FH+ALV C  F+GSK+ ISAPA SPNTDGIHI+RSS+V+ SRSHI TGDDC
Sbjct: 301 GITSVNSKLFHIALVGCHNFKGSKIKISAPAKSPNTDGIHIERSSSVYFSRSHIGTGDDC 360

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BLAST of HG10005542 vs. NCBI nr
Match: XP_038886976.1 (exopolygalacturonase isoform X1 [Benincasa hispida])

HSP 1 Score: 478.4 bits (1230), Expect = 5.6e-131
Identity = 237/251 (94.42%), Postives = 241/251 (96.02%), Query Frame = 0


Query: 109 CLSSVLSRGILEADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSA 168
           C SSVLS   LEADVS SLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSA
Sbjct: 17  CFSSVLSGENLEADVSESLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSA 76

Query: 169 GAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWM 228
           G VTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMK  GYLKASTDLSKYGSGAGWIEFRWM
Sbjct: 77  GLVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMK--GYLKASTDLSKYGSGAGWIEFRWM 136

Query: 229 EGLTLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHL 288
           EGLTLTGGGTFDG+GAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSL+SKFFHL
Sbjct: 137 EGLTLTGGGTFDGQGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLDSKFFHL 196

Query: 289 ALVQCKRFRGSKLMISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTI 348
           ALVQCKRFRGSKLMISAPANSPNTDGIHIDRS NVHLS+S IQTGDDCISIGQGNSQVT+
Sbjct: 197 ALVQCKRFRGSKLMISAPANSPNTDGIHIDRSYNVHLSQSRIQTGDDCISIGQGNSQVTV 256

Query: 349 SSINCGPGHGI 360
           SSINCGPGHGI
Sbjct: 257 SSINCGPGHGI 265

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BLAST of HG10005542 vs. NCBI nr
Match: XP_023554538.1 (exopolygalacturonase isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 472.2 bits (1214), Expect = 4.0e-129
Identity = 231/251 (92.03%), Postives = 237/251 (94.42%), Query Frame = 0


Query: 109 CLSSVLSRGILEADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSA 168
           C SSVLSRGILEAD+SGSLLRYR KSS VFSVRSFGARANGLTDDSNAF   WRMACGSA
Sbjct: 17  CFSSVLSRGILEADISGSLLRYRAKSSRVFSVRSFGARANGLTDDSNAFSETWRMACGSA 76

Query: 169 GAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWM 228
           G VTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMK  GYLKASTDLSKYGSGAGWIEFRWM
Sbjct: 77  GVVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMK--GYLKASTDLSKYGSGAGWIEFRWM 136

Query: 229 EGLTLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHL 288
           EGLTLTGGGTFDGRGAEAWPFNNCLDD+NC LLPTNLKFVAMNNTVV+ ITSLNSKFFHL
Sbjct: 137 EGLTLTGGGTFDGRGAEAWPFNNCLDDHNCNLLPTNLKFVAMNNTVVRRITSLNSKFFHL 196

Query: 289 ALVQCKRFRGSKLMISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTI 348
           ALVQCKRFRGS L ISAPANSPNTDGIHIDRSSN+HLSRSHIQTGDDCISIGQGNSQVTI
Sbjct: 197 ALVQCKRFRGSNLKISAPANSPNTDGIHIDRSSNIHLSRSHIQTGDDCISIGQGNSQVTI 256

Query: 349 SSINCGPGHGI 360
           + I+CGPGHGI
Sbjct: 257 TGIDCGPGHGI 265

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BLAST of HG10005542 vs. ExPASy Swiss-Prot
Match: P35339 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 5.7e-54
Identity = 104/222 (46.85%), Postives = 137/222 (61.71%), Query Frame = 0


Query: 138 FSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSL 197
           F +   GA  NG TD + A   AW  ACG  G  T LIPKG +LVGP+ F+GPCK     
Sbjct: 41  FDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKG---- 100

Query: 198 TVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDDYN 257
            V ++  G L A+TDLS+Y     WIE   ++ L +TG G  DG+G   W  N+C+  Y+
Sbjct: 101 DVTIQVNGNLLATTDLSQYKDHGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYD 160

Query: 258 CKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHI 317
           CK+LP +L    +NN  V  IT LNSKFFH+ + +CK      + ++AP +SPNTDGIH+
Sbjct: 161 CKILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHM 220

Query: 318 DRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI 360
             SS V ++ + I  GDDCISIG G S+V I+ + CGPGHGI
Sbjct: 221 GDSSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGI 258

[Close]

BLAST of HG10005542 vs. ExPASy Swiss-Prot
Match: P35338 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.8e-53
Identity = 102/222 (45.95%), Postives = 135/222 (60.81%), Query Frame = 0


Query: 138 FSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSL 197
           F +   GA  NG TD + A   AW  ACG  G  T LIPKG +LVG + F+GPCK     
Sbjct: 41  FDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKG---- 100

Query: 198 TVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDDYN 257
            V ++  G L A+TDLS+Y     WIE   ++ L +TG G  DG+G   W  N+C   Y+
Sbjct: 101 DVTIQVDGNLLATTDLSQYKEHGNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYD 160

Query: 258 CKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHI 317
           CK+LP +L    +NN  V  +T LNSKFFH+ + QCK      + ++AP +SPNTDGIH+
Sbjct: 161 CKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYQCKNMLIKDVTVTAPGDSPNTDGIHM 220

Query: 318 DRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI 360
             SS + ++ + I  GDDCISIG G S+V I+ + CGPGHGI
Sbjct: 221 GDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGI 258

[Close]

BLAST of HG10005542 vs. ExPASy Swiss-Prot
Match: P26216 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.4e-52
Identity = 101/222 (45.50%), Postives = 135/222 (60.81%), Query Frame = 0


Query: 138 FSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSL 197
           F +   GA  NG TD + A   AW  ACG  G  T LIPKG +LVG + F+GPCK     
Sbjct: 41  FDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKG---- 100

Query: 198 TVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDDYN 257
            V ++  G L A+TDLS+Y     WIE   ++ L +TG G  DG+G   W  N+C   Y+
Sbjct: 101 DVTIQVDGNLLATTDLSQYKDHGNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYD 160

Query: 258 CKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHI 317
           CK+LP +L    +NN  V  +T LNSKFFH+ + +CK      + ++AP +SPNTDGIH+
Sbjct: 161 CKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHM 220

Query: 318 DRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI 360
             SS + ++ + I  GDDCISIG G S+V I+ + CGPGHGI
Sbjct: 221 GDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGI 258

[Close]

BLAST of HG10005542 vs. ExPASy Swiss-Prot
Match: Q6H9K0 (Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.9e-50
Identity = 103/226 (45.58%), Postives = 140/226 (61.95%), Query Frame = 0


Query: 134 SSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKN 193
           S  VF+V  +GA+  G  D S A + AW+ AC S G  T LIPKG Y +G V   GPCK 
Sbjct: 6   SGSVFNVNDYGAKGAG--DISQAVMKAWKAACASQGPSTVLIPKGNYNMGEVAMQGPCKG 65

Query: 194 VSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCL 253
                +  +  G +KA  D SK+ S  GW+ F  ++GLT++G GT DG+G  AW  NNC 
Sbjct: 66  SK---IGFQIDGVVKAPADPSKFKSD-GWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCD 125

Query: 254 DDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTD 313
            + NCK    NL+F  + + +V+ ITSLNSK FH+ +++C+      + ++AP  S NTD
Sbjct: 126 KNPNCKHAAMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTD 185

Query: 314 GIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI 360
           GIH+  S  V ++ + I TGDDCISIG G+  VTI+ +NCGPGHGI
Sbjct: 186 GIHVGISKGVTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGI 225

[Close]

BLAST of HG10005542 vs. ExPASy Swiss-Prot
Match: P49063 (Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 PE=2 SV=2)

HSP 1 Score: 189.9 bits (481), Expect = 5.2e-47
Identity = 99/240 (41.25%), Postives = 137/240 (57.08%), Query Frame = 0


Query: 121 ADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTY 180
           A VSG+      K      V++ GA+ +  TDDS AF AAW+ AC +   +T  +PKG Y
Sbjct: 59  AKVSGA------KPGAAVDVKASGAKGDSKTDDSAAFAAAWKEACAAGSTIT--VPKGEY 118

Query: 181 LVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGG-GTF 240
           +V  ++F GPCK      V ++  G  KA   +      AGWI+F  +   TL G    F
Sbjct: 119 MVESLEFKGPCKG----PVTLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNGNKAIF 178

Query: 241 DGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGS 300
           DG+G+ AW  N+C     C  LP N++F  + N+ +  ITS NSK FH+ ++ CK    S
Sbjct: 179 DGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLS 238

Query: 301 KLMISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI 360
            + I AP  S NTDGIHI RS+ V+L  + I+TGDDC+SIG G   + + ++ CGPGHGI
Sbjct: 239 DIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGI 286

[Close]

BLAST of HG10005542 vs. ExPASy TrEMBL
Match: A0A5N5LGD1 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_014821 PE=3 SV=1)

HSP 1 Score: 507.7 bits (1306), Expect = 4.2e-140
Identity = 265/358 (74.02%), Postives = 298/358 (83.24%), Query Frame = 0


Query: 3   LRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAE 62
           +RIKAVVDKFV+ELKEALDADIQDRIMKEREMQSYI+EREREVAEREAAWKAELSRREAE
Sbjct: 1   MRIKAVVDKFVQELKEALDADIQDRIMKEREMQSYIQEREREVAEREAAWKAELSRREAE 60

Query: 63  IARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLSSVLSRGILEAD 122
           IARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEITVSG   +       R IL   
Sbjct: 61  IARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEITVSGADGQGFEVEARRPILH-- 120

Query: 123 VSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLV 182
                     +SS +F V+ FGARA+G TDDS AF+AAW+ AC + G V  L+PKG YL+
Sbjct: 121 ----------RSSLLFDVKRFGARADGRTDDSKAFIAAWKEACRATGKVKLLVPKGVYLI 180

Query: 183 GPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGR 242
           GPVKF+GPCKNVSSLT      GYLKA+  LS+YGSG GW+EF W+E LTLTGGGTFDG+
Sbjct: 181 GPVKFAGPCKNVSSLT------GYLKATAKLSRYGSGTGWVEFGWLERLTLTGGGTFDGQ 240

Query: 243 GAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLM 302
           GA+AWP+NNC  D  CKLLPTN+KFVAMN TVVQ ITSLNSKFFH+ALV+CK F+G+++ 
Sbjct: 241 GAKAWPYNNCTTDSKCKLLPTNVKFVAMNQTVVQGITSLNSKFFHIALVECKNFKGTEIK 300

Query: 303 ISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGIR 361
           ISAPA+SPNTDGIH++RSSNV +SRS I TGDDCISIGQGNSQVTI+ I CGPGHGIR
Sbjct: 301 ISAPADSPNTDGIHVERSSNVCISRSLIGTGDDCISIGQGNSQVTITRIRCGPGHGIR 340

[Close]

BLAST of HG10005542 vs. ExPASy TrEMBL
Match: A0A1R3K4Y7 (Glycoside hydrolase, family 28 OS=Corchorus capsularis OX=210143 GN=CCACVL1_02906 PE=3 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 5.6e-129
Identity = 250/359 (69.64%), Postives = 278/359 (77.44%), Query Frame = 0


Query: 1   MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRE 60
           MSLRIK VVDKFVEELKEAL+ADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRE
Sbjct: 1   MSLRIKTVVDKFVEELKEALEADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRE 60

Query: 61  AEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLSSVLSRGILE 120
           AEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEIT                   
Sbjct: 61  AEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEIT------------------- 120

Query: 121 ADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTY 180
                                              AF AAW+ AC     V  +IPKGTY
Sbjct: 121 -----------------------------------AFKAAWKKACQGTSEVDIVIPKGTY 180

Query: 181 LVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFD 240
           L+GPVKF+GPCKNVS +TV +K  GYLKA+T+LSKYG  AGWIEF+W+EGL LTGGGTFD
Sbjct: 181 LIGPVKFTGPCKNVSKITVHVK--GYLKATTNLSKYGHNAGWIEFKWVEGLILTGGGTFD 240

Query: 241 GRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSK 300
           G+GA+AWP+NNC  D+NCKLLPTN+KFVA+N TVV+ ITS+NSKFFH+ALV+CK F+GSK
Sbjct: 241 GQGAKAWPYNNCPTDFNCKLLPTNVKFVAVNRTVVRSITSVNSKFFHIALVECKNFKGSK 300

Query: 301 LMISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI 360
           + ISAPA+SPNTDGIHI+RSS VH SRS I TGDDCISIGQGNSQ+TI+SI+CGPGHGI
Sbjct: 301 IKISAPADSPNTDGIHIERSSGVHFSRSLIGTGDDCISIGQGNSQITITSISCGPGHGI 303

[Close]

BLAST of HG10005542 vs. ExPASy TrEMBL
Match: A0A6J1GKW5 (exopolygalacturonase isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455300 PE=3 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 3.7e-128
Identity = 229/251 (91.24%), Postives = 236/251 (94.02%), Query Frame = 0


Query: 109 CLSSVLSRGILEADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSA 168
           C SSVLSRGILEAD+SGSLLRYR KSS VFSVRSFGARANGLTDDSNAF   WRMACGSA
Sbjct: 17  CFSSVLSRGILEADISGSLLRYRAKSSRVFSVRSFGARANGLTDDSNAFSQTWRMACGSA 76

Query: 169 GAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWM 228
           G VTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMK  GYLKASTDLSKYGSGAGWIEFRW+
Sbjct: 77  GVVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMK--GYLKASTDLSKYGSGAGWIEFRWV 136

Query: 229 EGLTLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHL 288
           EGLTLTGGGTFDGRGAEAWPFNNCLDD+NC LLPTNLKFVAMNNTVV+ ITSLNSKFFHL
Sbjct: 137 EGLTLTGGGTFDGRGAEAWPFNNCLDDHNCNLLPTNLKFVAMNNTVVRRITSLNSKFFHL 196

Query: 289 ALVQCKRFRGSKLMISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTI 348
           ALVQCK FRGS L ISAPANSPNTDGIHIDRSSN+HLSRSHIQTGDDCISIGQGNSQVTI
Sbjct: 197 ALVQCKGFRGSNLKISAPANSPNTDGIHIDRSSNIHLSRSHIQTGDDCISIGQGNSQVTI 256

Query: 349 SSINCGPGHGI 360
           + I+CGPGHGI
Sbjct: 257 TGIDCGPGHGI 265

[Close]

BLAST of HG10005542 vs. ExPASy TrEMBL
Match: A0A6J1I1R6 (exopolygalacturonase isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468238 PE=3 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 1.1e-127
Identity = 228/251 (90.84%), Postives = 235/251 (93.63%), Query Frame = 0


Query: 109 CLSSVLSRGILEADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSA 168
           C SSVLSRGILEAD+SGSLLRY  KSSHVFSVRSFGARANGLTDDS+AF   WRMAC SA
Sbjct: 17  CFSSVLSRGILEADISGSLLRYGAKSSHVFSVRSFGARANGLTDDSDAFTETWRMACASA 76

Query: 169 GAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWM 228
           G VTFLIPKGTYLVGPVKFSGPCKNVSSL VKMK  GYLKASTDLSKYGSGAGWIEFRWM
Sbjct: 77  GVVTFLIPKGTYLVGPVKFSGPCKNVSSLMVKMK--GYLKASTDLSKYGSGAGWIEFRWM 136

Query: 229 EGLTLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHL 288
           EGLTLTGGGTFDGRGAEAWPFNNCLDD+NC LLPTNLKFVAMNNTVV+ ITSLNSKFFHL
Sbjct: 137 EGLTLTGGGTFDGRGAEAWPFNNCLDDHNCNLLPTNLKFVAMNNTVVRRITSLNSKFFHL 196

Query: 289 ALVQCKRFRGSKLMISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTI 348
           ALVQCKRFRGS L ISAPANSPNTDGIHIDRSSN+HLSRSHIQTGDDCISIGQGNSQVTI
Sbjct: 197 ALVQCKRFRGSNLKISAPANSPNTDGIHIDRSSNIHLSRSHIQTGDDCISIGQGNSQVTI 256

Query: 349 SSINCGPGHGI 360
           + I+CGPGHGI
Sbjct: 257 TGIDCGPGHGI 265

[Close]

BLAST of HG10005542 vs. ExPASy TrEMBL
Match: A0A1S3BQX3 (exopolygalacturonase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492566 PE=3 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 3.1e-127
Identity = 229/248 (92.34%), Postives = 235/248 (94.76%), Query Frame = 0


Query: 112 SVLSRGILEADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAV 171
           S LSRGILE+DVSGSLLRYRTKSSHV+SVRSFGARANGLTDDSNAFLAAWR AC SAG V
Sbjct: 4   SFLSRGILESDVSGSLLRYRTKSSHVYSVRSFGARANGLTDDSNAFLAAWRTACDSAGVV 63

Query: 172 TFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGL 231
           TFLIPKGTYLVGPVKFSGPCKNVSSLTVKMK  GYLKAST+LSKYGSGAGWIEFRWMEGL
Sbjct: 64  TFLIPKGTYLVGPVKFSGPCKNVSSLTVKMK--GYLKASTNLSKYGSGAGWIEFRWMEGL 123

Query: 232 TLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALV 291
           TLTGGGTFDGRG+EAWPFNNC DDYNCKLLPTNLKFVA+NNTVVQHITSLNSKFFHLALV
Sbjct: 124 TLTGGGTFDGRGSEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQHITSLNSKFFHLALV 183

Query: 292 QCKRFRGSKLMISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSI 351
           QCK F GSKL ISAP NSPNTDGIHIDRSSNVH S SHIQTGDDCISIGQGNS+VTISSI
Sbjct: 184 QCKGFIGSKLKISAPENSPNTDGIHIDRSSNVHFSLSHIQTGDDCISIGQGNSEVTISSI 243

Query: 352 NCGPGHGI 360
           NCGPGHGI
Sbjct: 244 NCGPGHGI 249

[Close]

BLAST of HG10005542 vs. TAIR 10
Match: AT4G18180.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 315.8 bits (808), Expect = 4.5e-86
Identity = 151/227 (66.52%), Postives = 185/227 (81.50%), Query Frame = 0


Query: 134 SSHVFSVRSFGARANGLTDDSNAFLAAWRMAC-GSAGAVTFLIPKGTYLVGPVKFSGPCK 193
           S  +  VRSFGARAN   D + AF+AAW  AC  S+ +V  +IP+G + VG ++FSGPC 
Sbjct: 31  SVFLVDVRSFGARANDHRDHTKAFVAAWDKACKSSSSSVNLIIPRGEFSVGSLRFSGPCT 90

Query: 194 NVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNC 253
           NVS+LTV+      +KASTDLSKY SG GWI+F W+ GLTLTGGGTFDG+GA AWPFNNC
Sbjct: 91  NVSNLTVR------VKASTDLSKYRSGGGWIQFGWINGLTLTGGGTFDGQGALAWPFNNC 150

Query: 254 LDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNT 313
             D NCKLLPT+LKFV MN TVV+ I+S+NSKFFH+ALV+C+ F+G++L I+AP++SPNT
Sbjct: 151 TSDSNCKLLPTSLKFVGMNRTVVRRISSVNSKFFHIALVECRDFKGTRLNITAPSDSPNT 210

Query: 314 DGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI 360
           DGIHI+RSSNV+ SRSHI TGDDC+SIGQGNSQ+TI+SI CGPGHGI
Sbjct: 211 DGIHIERSSNVYFSRSHIATGDDCVSIGQGNSQITITSIKCGPGHGI 251

[Close]

BLAST of HG10005542 vs. TAIR 10
Match: AT2G17350.1 (unknown protein; Has 119 Blast hits to 93 proteins in 40 species: Archae - 0; Bacteria - 3; Metazoa - 18; Fungi - 12; Plants - 44; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). )

HSP 1 Score: 191.4 bits (485), Expect = 1.3e-48
Identity = 106/110 (96.36%), Postives = 108/110 (98.18%), Query Frame = 0


Query: 1   MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRE 60
           MSLRIK VVDKFVEELK+ALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRE
Sbjct: 1   MSLRIKLVVDKFVEELKQALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRE 60

Query: 61  AEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCL 111
            EIARQEARLKME+ENLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCL
Sbjct: 61  TEIARQEARLKMERENLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCL 110

[Close]

BLAST of HG10005542 vs. TAIR 10
Match: AT3G14040.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 191.4 bits (485), Expect = 1.3e-48
Identity = 95/221 (42.99%), Postives = 132/221 (59.73%), Query Frame = 0


Query: 140 VRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTV 199
           V++ GA+ +G TDDS AF AAW+ AC +   +T  +PKG YLV  ++F GPCK      V
Sbjct: 73  VKASGAKGDGKTDDSAAFAAAWKEACAAGSTIT--VPKGEYLVESLEFKGPCKG----PV 132

Query: 200 KMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGG-GTFDGRGAEAWPFNNCLDDYNC 259
            ++  G  KA   +      AGWI+F  +   TL G    FDG+G+ AW  N+C     C
Sbjct: 133 TLELNGNFKAPATVKTTKPHAGWIDFENLADFTLNGNKAIFDGQGSLAWKANDCAKTGKC 192

Query: 260 KLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHID 319
             LP N++F  + N+ +  ITS NSK FH+ ++ CK    + + I AP  S NTDGIHI 
Sbjct: 193 NSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIG 252

Query: 320 RSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI 360
           RS+ V+L  + I+TGDDC+SIG G   + + ++ CGPGHGI
Sbjct: 253 RSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGI 287

[Close]

BLAST of HG10005542 vs. TAIR 10
Match: AT1G43080.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 189.9 bits (481), Expect = 3.7e-48
Identity = 95/224 (42.41%), Postives = 139/224 (62.05%), Query Frame = 0


Query: 137 VFSVRSFGARANGLTDDSNAFLAAWRMACGS-AGAVTFLIPKGTYLVGPVKFSGPCKNVS 196
           VF+VR +G+R +G TD++NAF + W+ AC   +G+    +PKGT+ +G V+F GPCKN  
Sbjct: 30  VFNVRRYGSRPDGKTDNANAFTSVWKRACTRISGSSKIYVPKGTFYLGGVEFVGPCKN-- 89

Query: 197 SLTVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDD 256
              ++    G L A  +         WI FR++  L+++G GT DG+G  +WP N+C  +
Sbjct: 90  --PIEFVIDGTLLAPANPRDIKQDT-WINFRYINNLSISGSGTLDGQGKYSWPLNDCHKN 149

Query: 257 YNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGI 316
            NC  L   + F  +NN+ ++ ITSLNSK  H       RF  + + I+AP +SPNTDGI
Sbjct: 150 TNCPKLAMTMGFAFVNNSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGI 209

Query: 317 HIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI 360
            +   SN+H+S ++I TGDDCI+I  G + + IS+I CGPGHGI
Sbjct: 210 KMGSCSNIHISNTNIGTGDDCIAILSGTTNLDISNIKCGPGHGI 248

[Close]

BLAST of HG10005542 vs. TAIR 10
Match: AT3G07850.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 189.9 bits (481), Expect = 3.7e-48
Identity = 99/240 (41.25%), Postives = 137/240 (57.08%), Query Frame = 0


Query: 121 ADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTY 180
           A VSG+      K      V++ GA+ +  TDDS AF AAW+ AC +   +T  +PKG Y
Sbjct: 59  AKVSGA------KPGAAVDVKASGAKGDSKTDDSAAFAAAWKEACAAGSTIT--VPKGEY 118

Query: 181 LVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGG-GTF 240
           +V  ++F GPCK      V ++  G  KA   +      AGWI+F  +   TL G    F
Sbjct: 119 MVESLEFKGPCKG----PVTLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNGNKAIF 178

Query: 241 DGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGS 300
           DG+G+ AW  N+C     C  LP N++F  + N+ +  ITS NSK FH+ ++ CK    S
Sbjct: 179 DGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLS 238

Query: 301 KLMISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI 360
            + I AP  S NTDGIHI RS+ V+L  + I+TGDDC+SIG G   + + ++ CGPGHGI
Sbjct: 239 DIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGI 286

The following BLAST results are available for this feature:

BLAST of HG10005542 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8645702.1	1.1e-147	79.94	hypothetical protein Csa_020363 [Cucumis sativus]	[more]
KAB5541847.1	8.6e-140	74.02	hypothetical protein DKX38_014821 [Salix brachista]	[more]
KAF3434896.1	2.7e-133	70.05	hypothetical protein FNV43_RR21983 [Rhamnella rubrinervis]	[more]
XP_038886976.1	5.6e-131	94.42	exopolygalacturonase isoform X1 [Benincasa hispida]	[more]
XP_023554538.1	4.0e-129	92.03	exopolygalacturonase isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10005542 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P35339	5.7e-54	46.85	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1	[more]
P35338	2.8e-53	45.95	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1	[more]
P26216	1.4e-52	45.50	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1	[more]
Q6H9K0	2.9e-50	45.58	Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 S...	[more]
P49063	5.2e-47	41.25	Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 ...	[more]

BLAST of HG10005542 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5N5LGD1	4.2e-140	74.02	Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_014821 PE=3 SV=1	[more]
A0A1R3K4Y7	5.6e-129	69.64	Glycoside hydrolase, family 28 OS=Corchorus capsularis OX=210143 GN=CCACVL1_0290...	[more]
A0A6J1GKW5	3.7e-128	91.24	exopolygalacturonase isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455300 PE...	[more]
A0A6J1I1R6	1.1e-127	90.84	exopolygalacturonase isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468238 PE=3...	[more]
A0A1S3BQX3	3.1e-127	92.34	exopolygalacturonase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492566 PE=3 SV=...	[more]

BLAST of HG10005542 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18180.1	4.5e-86	66.52	Pectin lyase-like superfamily protein	[more]
AT2G17350.1	1.3e-48	96.36	unknown protein; Has 119 Blast hits to 93 proteins in 40 species: Archae - 0; Ba...	[more]
AT3G14040.1	1.3e-48	42.99	Pectin lyase-like superfamily protein	[more]
AT1G43080.1	3.7e-48	42.41	Pectin lyase-like superfamily protein	[more]
AT3G07850.1	3.7e-48	41.25	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 56..83
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 130..359
None	No IPR available	PANTHER	PTHR31375:SF11	PECTIN LYASE-LIKE SUPERFAMILY PROTEIN	coord: 130..359
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 165..359 e-value: 5.1E-46 score: 157.2
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 120..366 e-value: 5.5E-65 score: 221.9
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 134..360

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005542.1	HG10005542.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity