HG10005528 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005528
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Mitochondrial transcription termination factor family protein
Location	Chr07: 3355127 .. 3356113 (+)
RNA-Seq Expression	HG10005528
Synteny	HG10005528

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATTAGCGCCAGTCGAAATGGTAATTGTATGCTGTGGTTCTTCAGGGATAAGGGTTTTGATGATAGAAGCATTGATAAGATGTTTAGAAAGTGTAGGCGTTTGGAAGATATGCAGAAGGAAAGAGCTTCTGAAAACTGGGAATATTTAGAAGGAATTGGGATTCAAAAGAGGAAGCTTCCTTCTGTTGTTTCCAAATGCCCTAAGATTTTAGCTCTTGGTCTCCAAGAGAAACTTGTTCCCATGGTTGAGTGCCTTGCAACACTCAGCACTAAGTCTAATGAAATTGCTTCAGCTATTGCTAAATTTCCTGGCATTCTTTCTTATAGTGTTGAAGAGAAGCTATGCCCACTTTTGGCTTTCTTTCAAGCATTGGGTGTCCCTGAAAAGCACCTTGGAAAGATGATTCTACTCAACCCAAGGCTTATTAGTTACAGCATTGAATCGAAGCTCGTTGAAACAGTTGACTTTCTTGCTGGGTTTGGGCTAACGAAGGAGGGGGTGATTGGAAAAGTTCTTGCAAAAAATCCATTTCTCATGGGTTATAGTGTTGATAAAAGGCTCCGCCCGACTTTGGAGTTTTTGAAATCAATTGGTCTAAATGAGATGGATCTTCAAGCAGTTGCATTGAAATTTCCAGACATATTGTGTAGGGATGTGGATAAAGTTTTGAGACCTAATTTGGATTATCTAAGGAGACGTGGGTTTAAGGATGGAGAAATAGTGTCTTTGGTGACTGGTTATCCTCCTATTTTGATCAAGAGCATTCAACATTCTTTAGAACCTCGGATCAGATTTTTAGTCGAAATAATGGGAAAAAAACTTGACGAGGTTGCCGAATATCCCGACTTTTTTAAGCATGGTTTGAAGAAAAAACTTGAGTTGCGGCATAGATTGTTGAAAGAGAAGAAAGTGGACTTTACCTTGAGTGAATTGTTGGAATGCAATCAAAAGAAGTTTATGATGAAAATGGGTTTGTTATGA

mRNA sequence

ATGGAAATTAGCGCCAGTCGAAATGGTAATTGTATGCTGTGGTTCTTCAGGGATAAGGGTTTTGATGATAGAAGCATTGATAAGATGTTTAGAAAGTGTAGGCGTTTGGAAGATATGCAGAAGGAAAGAGCTTCTGAAAACTGGGAATATTTAGAAGGAATTGGGATTCAAAAGAGGAAGCTTCCTTCTGTTGTTTCCAAATGCCCTAAGATTTTAGCTCTTGGTCTCCAAGAGAAACTTGTTCCCATGGTTGAGTGCCTTGCAACACTCAGCACTAAGTCTAATGAAATTGCTTCAGCTATTGCTAAATTTCCTGGCATTCTTTCTTATAGTGTTGAAGAGAAGCTATGCCCACTTTTGGCTTTCTTTCAAGCATTGGGTGTCCCTGAAAAGCACCTTGGAAAGATGATTCTACTCAACCCAAGGCTTATTAGTTACAGCATTGAATCGAAGCTCGTTGAAACAGTTGACTTTCTTGCTGGGTTTGGGCTAACGAAGGAGGGGGTGATTGGAAAAGTTCTTGCAAAAAATCCATTTCTCATGGGTTATAGTGTTGATAAAAGGCTCCGCCCGACTTTGGAGTTTTTGAAATCAATTGGTCTAAATGAGATGGATCTTCAAGCAGTTGCATTGAAATTTCCAGACATATTGTGTAGGGATGTGGATAAAGTTTTGAGACCTAATTTGGATTATCTAAGGAGACGTGGGTTTAAGGATGGAGAAATAGTGTCTTTGGTGACTGGTTATCCTCCTATTTTGATCAAGAGCATTCAACATTCTTTAGAACCTCGGATCAGATTTTTAGTCGAAATAATGGGAAAAAAACTTGACGAGGTTGCCGAATATCCCGACTTTTTTAAGCATGGTTTGAAGAAAAAACTTGAGTTGCGGCATAGATTGTTGAAAGAGAAGAAAGTGGACTTTACCTTGAGTGAATTGTTGGAATGCAATCAAAAGAAGTTTATGATGAAAATGGGTTTGTTATGA

Coding sequence (CDS)

ATGGAAATTAGCGCCAGTCGAAATGGTAATTGTATGCTGTGGTTCTTCAGGGATAAGGGTTTTGATGATAGAAGCATTGATAAGATGTTTAGAAAGTGTAGGCGTTTGGAAGATATGCAGAAGGAAAGAGCTTCTGAAAACTGGGAATATTTAGAAGGAATTGGGATTCAAAAGAGGAAGCTTCCTTCTGTTGTTTCCAAATGCCCTAAGATTTTAGCTCTTGGTCTCCAAGAGAAACTTGTTCCCATGGTTGAGTGCCTTGCAACACTCAGCACTAAGTCTAATGAAATTGCTTCAGCTATTGCTAAATTTCCTGGCATTCTTTCTTATAGTGTTGAAGAGAAGCTATGCCCACTTTTGGCTTTCTTTCAAGCATTGGGTGTCCCTGAAAAGCACCTTGGAAAGATGATTCTACTCAACCCAAGGCTTATTAGTTACAGCATTGAATCGAAGCTCGTTGAAACAGTTGACTTTCTTGCTGGGTTTGGGCTAACGAAGGAGGGGGTGATTGGAAAAGTTCTTGCAAAAAATCCATTTCTCATGGGTTATAGTGTTGATAAAAGGCTCCGCCCGACTTTGGAGTTTTTGAAATCAATTGGTCTAAATGAGATGGATCTTCAAGCAGTTGCATTGAAATTTCCAGACATATTGTGTAGGGATGTGGATAAAGTTTTGAGACCTAATTTGGATTATCTAAGGAGACGTGGGTTTAAGGATGGAGAAATAGTGTCTTTGGTGACTGGTTATCCTCCTATTTTGATCAAGAGCATTCAACATTCTTTAGAACCTCGGATCAGATTTTTAGTCGAAATAATGGGAAAAAAACTTGACGAGGTTGCCGAATATCCCGACTTTTTTAAGCATGGTTTGAAGAAAAAACTTGAGTTGCGGCATAGATTGTTGAAAGAGAAGAAAGTGGACTTTACCTTGAGTGAATTGTTGGAATGCAATCAAAAGAAGTTTATGATGAAAATGGGTTTGTTATGA

Protein sequence

MEISASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQKERASENWEYLEGIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKSNEIASAIAKFPGILSYSVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGFGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTLEFLKSIGLNEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGKKLDEVAEYPDFFKHGLKKKLELRHRLLKEKKVDFTLSELLECNQKKFMMKMGLL

Homology

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BLAST of HG10005528 vs. NCBI nr
Match: XP_038887558.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial [Benincasa hispida])

HSP 1 Score: 621.3 bits (1601), Expect = 4.7e-174
Identity = 310/328 (94.51%), Postives = 322/328 (98.17%), Query Frame = 0


Query: 1   MEISASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQKERASENWEYLEGIGIQKRK 60
           ME+SASRNGNCMLWFFRDKGFDDRSIDKMF++CRRL+DMQKERASENWEYLE IGIQ+RK
Sbjct: 1   MEVSASRNGNCMLWFFRDKGFDDRSIDKMFKRCRRLKDMQKERASENWEYLERIGIQRRK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKSNEIASAIAKFPGILSYSVEEKLCPLL 120
           LPS+VSKCPKILALGLQEKLVPMVECLATLSTK NEIASAIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSIVSKCPKILALGLQEKLVPMVECLATLSTKPNEIASAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGFGLTKEGVIGKVLAKNPFL 180
           AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDF AGFGL KEGVIGKVLAKNPFL
Sbjct: 121 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFFAGFGLMKEGVIGKVLAKNPFL 180

Query: 181 MGYSVDKRLRPTLEFLKSIGLNEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDG 240
           MGYSVDKRLRPT EFL+SIGLNEMDLQAVALKFPDILCRDVDKVLRPNLDYLRR GFKDG
Sbjct: 181 MGYSVDKRLRPTSEFLRSIGLNEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRCGFKDG 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGKKLDEVAEYPDFFKHGLKKKLELRHRL 300
           EIVSLVTGYPP+LIKSIQHSLEPRIRFLVEIMG+KLDEVAEYPDFFKHGLKK+LELRHRL
Sbjct: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPDFFKHGLKKRLELRHRL 300

Query: 301 LKEKKVDFTLSELLECNQKKFMMKMGLL 329
           LKEK++DFTLSELLECNQKKFMMKMGLL
Sbjct: 301 LKEKQMDFTLSELLECNQKKFMMKMGLL 328

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BLAST of HG10005528 vs. NCBI nr
Match: XP_008451174.1 (PREDICTED: transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucumis melo])

HSP 1 Score: 616.7 bits (1589), Expect = 1.2e-172
Identity = 311/328 (94.82%), Postives = 319/328 (97.26%), Query Frame = 0


Query: 1   MEISASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQKERASENWEYLEGIGIQKRK 60
           ME SAS+NGNCMLWFFRDKGFDDRSIDKMFRKCRRLED Q ERASENWEYLE IGIQKRK
Sbjct: 1   MESSASQNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDTQNERASENWEYLERIGIQKRK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKSNEIASAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILALGLQEKLVPMVECLATLSTK +EIA+AIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGFGLTKEGVIGKVLAKNPFL 180
           AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAG GLTKEGVIGKVLAKNPFL
Sbjct: 121 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180

Query: 181 MGYSVDKRLRPTLEFLKSIGLNEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDG 240
           MGYSVDKRLRPT+EFLKSIGLN+MDLQAVALKFPDILCRDVDKVLR NLDYLR RGFKDG
Sbjct: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRSNLDYLRSRGFKDG 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGKKLDEVAEYPDFFKHGLKKKLELRHRL 300
           EIVS+VTGYPP+LIKSIQHSLEPRIRFLVEIMG+KLDEVAEYPDFFKHGLKKKLELRHRL
Sbjct: 241 EIVSMVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPDFFKHGLKKKLELRHRL 300

Query: 301 LKEKKVDFTLSELLECNQKKFMMKMGLL 329
           LKEK VDFTLSELLECNQKKFMMKMGLL
Sbjct: 301 LKEKNVDFTLSELLECNQKKFMMKMGLL 328

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BLAST of HG10005528 vs. NCBI nr
Match: KAA0059582.1 (transcription termination factor MTERF6 [Cucumis melo var. makuwa] >TYK25788.1 transcription termination factor MTERF6 [Cucumis melo var. makuwa])

HSP 1 Score: 616.7 bits (1589), Expect = 1.2e-172
Identity = 311/328 (94.82%), Postives = 319/328 (97.26%), Query Frame = 0


Query: 1   MEISASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQKERASENWEYLEGIGIQKRK 60
           ME SAS+NGNCMLWFFRDKGFDDRSIDKMFRKCRRLED Q ERASENWEYLE IGIQKRK
Sbjct: 8   MESSASQNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDTQNERASENWEYLERIGIQKRK 67

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKSNEIASAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILALGLQEKLVPMVECLATLSTK +EIA+AIAKFPGILSYSVEEKLCPLL
Sbjct: 68  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 127

Query: 121 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGFGLTKEGVIGKVLAKNPFL 180
           AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAG GLTKEGVIGKVLAKNPFL
Sbjct: 128 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 187

Query: 181 MGYSVDKRLRPTLEFLKSIGLNEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDG 240
           MGYSVDKRLRPT+EFLKSIGLN+MDLQAVALKFPDILCRDVDKVLR NLDYLR RGFKDG
Sbjct: 188 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRSNLDYLRSRGFKDG 247

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGKKLDEVAEYPDFFKHGLKKKLELRHRL 300
           EIVS+VTGYPP+LIKSIQHSLEPRIRFLVEIMG+KLDEVAEYPDFFKHGLKKKLELRHRL
Sbjct: 248 EIVSMVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPDFFKHGLKKKLELRHRL 307

Query: 301 LKEKKVDFTLSELLECNQKKFMMKMGLL 329
           LKEK VDFTLSELLECNQKKFMMKMGLL
Sbjct: 308 LKEKNVDFTLSELLECNQKKFMMKMGLL 335

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BLAST of HG10005528 vs. NCBI nr
Match: XP_004144567.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucumis sativus] >KGN43380.1 hypothetical protein Csa_020537 [Cucumis sativus])

HSP 1 Score: 614.0 bits (1582), Expect = 7.5e-172
Identity = 311/328 (94.82%), Postives = 318/328 (96.95%), Query Frame = 0


Query: 1   MEISASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQKERASENWEYLEGIGIQKRK 60
           ME SASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQ ERASENWEYLE IGIQKRK
Sbjct: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKSNEIASAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILALGLQEKLVPMVECLATLSTK +EIA+AIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGFGLTKEGVIGKVLAKNPFL 180
           AFFQALGVPEK LGKMILLNPRLISYSIESKLVETVDFLAG GLTKEGVIGKVLAKNPFL
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180

Query: 181 MGYSVDKRLRPTLEFLKSIGLNEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDG 240
           MGYSVDKRLRPT+EFLKSIGLN+MDLQAVALKFPDILCRDVDKVLR NLDYLR RGFKDG
Sbjct: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGKKLDEVAEYPDFFKHGLKKKLELRHRL 300
           EIVSLVTGYPP+LIKSIQHSLEPRIRFLVEIMG+KL+EVAEYPDFFKHGLKKKLELRHRL
Sbjct: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300

Query: 301 LKEKKVDFTLSELLECNQKKFMMKMGLL 329
           LKEK VDF LSELLECNQKKFMMKMGLL
Sbjct: 301 LKEKNVDFALSELLECNQKKFMMKMGLL 328

[Close]

BLAST of HG10005528 vs. NCBI nr
Match: XP_022969173.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucurbita maxima])

HSP 1 Score: 591.7 bits (1524), Expect = 4.0e-165
Identity = 297/328 (90.55%), Postives = 310/328 (94.51%), Query Frame = 0


Query: 1   MEISASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQKERASENWEYLEGIGIQKRK 60
           MEIS SRNG  MLWFFRDKGFDD SIDKMF+KCRRLE MQ ERA+ENWEYLEGIGIQKRK
Sbjct: 1   MEISGSRNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKSNEIASAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKIL LGLQEK+ PMVECLATL+TK  EIA+AIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLTTKPREIATAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGFGLTKEGVIGKVLAKNPFL 180
           AFFQALGVPEK LGKMILLNPRLISYSIESKL+ETVDFLAG GLTKEG+IGKVL KNPFL
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFL 180

Query: 181 MGYSVDKRLRPTLEFLKSIGLNEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDG 240
           +GYSV KRLRPT EFLKSIGL+EMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDG
Sbjct: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDG 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGKKLDEVAEYPDFFKHGLKKKLELRHRL 300
           EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMG+ LDEVAEYP+FFKHGLKK+LELRHRL
Sbjct: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRL 300

Query: 301 LKEKKVDFTLSELLECNQKKFMMKMGLL 329
           LKEK +DFTLSELLECNQKKFMMKM LL
Sbjct: 301 LKEKTMDFTLSELLECNQKKFMMKMSLL 328

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BLAST of HG10005528 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 7.7e-119
Identity = 209/321 (65.11%), Postives = 261/321 (81.31%), Query Frame = 0


Query: 8   NGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQKERASENWEYLEGI-GIQKRKLPSVVS 67
           N + ++WFFRDKGFDD SIDKM RKC++LE  Q + ASENW+YL  I GIQ+RKLP +VS
Sbjct: 5   NTSSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVS 64

Query: 68  KCPKILALGLQEKLVPMVECLATLSTKSNEIASAIAKFPGILSYSVEEKLCPLLAFFQAL 127
           +CPKIL L L E+L+PMVECL++L     E+ASAI KFP ILS+SVEEKLCPLLAFFQAL
Sbjct: 65  RCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQAL 124

Query: 128 GVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGFGLTKEGVIGKVLAKNPFLMGYSVD 187
           GVPE  LGKMIL NPRLISYSI++KL   V FLA  GL ++G+IGKVL KNPFLMGYSVD
Sbjct: 125 GVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVD 184

Query: 188 KRLRPTLEFLK-SIGLNEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDGEIVSL 247
           KRLRPT EFLK S+GL+E  +++V + FP +LCRDV+K+L+PN DYL+  GF D +I ++
Sbjct: 185 KRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATM 244

Query: 248 VTGYPPILIKSIQHSLEPRIRFLVEIMGKKLDEVAEYPDFFKHGLKKKLELRHRLLKEKK 307
           VTGYP ILIKS+++SL+PRIRFLV++MG+ +DEVA YP+FF HGLKKK+E R +L+K+  
Sbjct: 245 VTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNN 304

Query: 308 VDFTLSELLECNQKKFMMKMG 327
           +D +L E+L+CN KKF  K G
Sbjct: 305 IDCSLREMLDCNTKKFHEKFG 325

[Close]

BLAST of HG10005528 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.8e-27
Identity = 73/291 (25.09%), Postives = 147/291 (50.52%), Query Frame = 0


Query: 32  KCRRLEDMQKERASENWEYLEGIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLS 91
           +C  L     E      ++   +G+ +    ++V   PKI+     + +   +  L    
Sbjct: 304 RCPELLSFSMEEVKSRVDFFLKMGMNQNDFGTMVYDYPKIIGFFSFQVMEKKINYLKEFG 363

Query: 92  TKSNEIASAIAKFPGILSYSVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESK 151
             + E+   +A  P ++  S+EE+  PL+ +F  LG+P++ + +++++ P L    +E  
Sbjct: 364 LSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKT 423

Query: 152 LVETVDFLAGFGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTLEFLKS-IGLNEMDLQAVA 211
           +   V FL   G+  E  IG +L K P L+  S+ K++RP + FL +  G+ + D+  V 
Sbjct: 424 IAPKVRFLQEMGIPNE-AIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVI 483

Query: 212 LKFPDILCRDVDKVLRPNLDYLRRRGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVE 271
              P +L   +   L PN+ Y    G +  ++  ++  +P +L  ++  +L P+ R+L  
Sbjct: 484 AMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVD-NLRPKYRYLRR 543

Query: 272 IMGKKLDEVAEYPDFFKHGLKKKLELRHRLLKEKKVDFTLSELLECNQKKF 322
            M + L ++ E+P FF + L++++  RH ++ E +V+F L  +L C  ++F
Sbjct: 544 TMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNFKLRYMLACTDEEF 592

[Close]

BLAST of HG10005528 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.4e-27
Identity = 85/316 (26.90%), Postives = 164/316 (51.90%), Query Frame = 0


Query: 19  KGFDDRSID-KMFRKCRRLEDMQKERA-SENWEYLEGIGIQKRKLPSVVSKCPKILALGL 78
           +G  D + D +  R   R+ ++  E A      YL  +G+   ++ ++  K        L
Sbjct: 169 RGDTDSAADTRKLRAVSRVSELDTEGALRPQTLYLLDLGLNLEQIKTITRKFAAFPYYSL 228

Query: 79  QEKLVPMVECLATLSTKSNEIASAIAKFPGILSYSVEEKLCPLLAFFQALGVPEKHLGKM 138
             K+ P+VE L  L    ++I + + K P I   S+ + L P +AF + LG+ +    K+
Sbjct: 229 DGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKI 288

Query: 139 ILLNPRLISYSIESKLVETVDFLAGFGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTLEFL 198
           I   P +++YS   KL  TV+FL+  GLT+E  IG++L + P +M YSV+ +LRPT+E+ 
Sbjct: 289 ISRFPAILTYS-RQKLTSTVEFLSQTGLTEE-QIGRILTRCPNIMSYSVEDKLRPTMEYF 348

Query: 199 KSIGLNEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDGEIVSLVTGYPPILIKS 258
           +S+    +D+  +  + P      ++  L+P  ++   +GF   EI  +++ Y  +   S
Sbjct: 349 RSL---NVDVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFS 408

Query: 259 IQHSLEPRIRFLVEIMGKKLDEVAEYPDFFKHGLKKKLELRHRLLKEKKVDFTLSELLEC 318
           ++ ++ P+  +  + M     E+ ++P FF + L+++++ R+ L++   V   L+++L  
Sbjct: 409 LKENVMPKWDYF-QTMDYPKSELVKFPQFFGYSLQERIKPRYELVQRSGVRLLLNQVLSL 468

Query: 319 N-------QKKFMMKM 326
           +        KK MMK+
Sbjct: 469 SGIEFEKVVKKKMMKL 478

[Close]

BLAST of HG10005528 vs. ExPASy Swiss-Prot
Match: B6TGN4 (Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MTERF4 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 7.1e-24
Identity = 66/313 (21.09%), Postives = 150/313 (47.92%), Query Frame = 0


Query: 49  EYLEGIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKSNEIASAIAKFPGIL 108
           +YL  +G+++  LP ++ + P++L   +   L P+V+ L  +  +  ++   + ++P +L
Sbjct: 140 DYLGKLGVRRDALPDLLRRYPQVLHASVVVDLAPVVKYLQGMDVRPTDVPRVLERYPELL 199

Query: 109 SYSVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGFGLTKEG 168
            + +E  +   +A+   +GV  + +G +I   P ++   +   +   V+ L G GL +  
Sbjct: 200 GFKLEGTMSTSVAYLVGIGVGRRQVGSVITRFPEVLGMRVGKIIKPFVEHLEGIGLQRL- 259

Query: 169 VIGKVLAKNPFLMGYSVDKRLRPTLEFLKSIGLNEMDLQAVALKFPDIL----------- 228
            I +++ K P+++G+ + ++++P +E L  IG+ +  L ++ +++PD+L           
Sbjct: 260 AIARIIEKKPYVLGFGLQEKVKPNIEALVDIGVRKEALASIVMQYPDVLGLELRDKLVAQ 319

Query: 229 -----------CRDVDKVLR--------------PNLDYLRRRGFKDGEIVSLVTGYPPI 288
                        D  +VL                ++++L   GF   ++  +V   P +
Sbjct: 320 QSLFESSILVSREDFGRVLERMPQAISLGRAAVLKHVNFLTACGFMLSQVSKMVVACPQL 379

Query: 289 LIKSIQHSLEPRIRFLVEIMGKKLDEVAEYPDFFKHGLKKKLELRHRLLKEKKVDFTLSE 326
           L  +I   +     +    M + L+E+ E+P FF +G++  +  RH ++  K +  +L+ 
Sbjct: 380 LALNID-IMRMNFEYFKNEMERDLEELVEFPAFFTYGIESTVRPRHEMVSRKGLTCSLAW 439

[Close]

BLAST of HG10005528 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.0e-22
Identity = 64/278 (23.02%), Postives = 142/278 (51.08%), Query Frame = 0


Query: 49  EYLEGIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKSNEIASAIAKFPGIL 108
           +YL+G+ I+   +P V+ + P++L   L+  +   V  L  +     EI   + ++P IL
Sbjct: 220 KYLQGLDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPEIL 279

Query: 109 SYSVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGFGLTKEG 168
              V   + PL+ + + LG+P     ++I   P ++ + ++  +   V  L  F + +E 
Sbjct: 280 GMRVARIIKPLVEYLEVLGIPRLAAARLIEKRPHILGFELDDTVKPNVQILQDFNV-RET 339

Query: 169 VIGKVLAKNPFLMGYSVDKRLRPTLEFL-KSIGLNEMDLQAVALKFPDILCRDVDKVLRP 228
            +  ++A+ P ++G  +  +L    + L  +I LN  DL ++  + P  +      +L+ 
Sbjct: 340 SLPSIIAQYPEIIGIDLKPKLDTQRKLLCSAIHLNPEDLGSLIERMPQFVSLSESPMLK- 399

Query: 229 NLDYLRRRGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGKKLDEVAEYPDFFK 288
           ++D+L + GF   +   +V G P +L  ++   ++    +  + M + L ++ ++P FF 
Sbjct: 400 HIDFLTKCGFSIDQTREMVIGCPQVLALNL-GIMKLSFEYFQKEMKRPLQDLVDFPAFFT 459

Query: 289 HGLKKKLELRHRLLKEKKVDFTLSELLECNQKKFMMKM 326
           +GL+  ++ RH+ + +K +  +L+ +L C+ +KF  +M
Sbjct: 460 YGLESTVKPRHKKIIKKGIKCSLAWMLNCSDEKFEQRM 494

[Close]

BLAST of HG10005528 vs. ExPASy TrEMBL
Match: A0A5A7UUK2 (Transcription termination factor MTERF6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold640G00330 PE=3 SV=1)

HSP 1 Score: 616.7 bits (1589), Expect = 5.6e-173
Identity = 311/328 (94.82%), Postives = 319/328 (97.26%), Query Frame = 0


Query: 1   MEISASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQKERASENWEYLEGIGIQKRK 60
           ME SAS+NGNCMLWFFRDKGFDDRSIDKMFRKCRRLED Q ERASENWEYLE IGIQKRK
Sbjct: 8   MESSASQNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDTQNERASENWEYLERIGIQKRK 67

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKSNEIASAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILALGLQEKLVPMVECLATLSTK +EIA+AIAKFPGILSYSVEEKLCPLL
Sbjct: 68  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 127

Query: 121 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGFGLTKEGVIGKVLAKNPFL 180
           AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAG GLTKEGVIGKVLAKNPFL
Sbjct: 128 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 187

Query: 181 MGYSVDKRLRPTLEFLKSIGLNEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDG 240
           MGYSVDKRLRPT+EFLKSIGLN+MDLQAVALKFPDILCRDVDKVLR NLDYLR RGFKDG
Sbjct: 188 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRSNLDYLRSRGFKDG 247

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGKKLDEVAEYPDFFKHGLKKKLELRHRL 300
           EIVS+VTGYPP+LIKSIQHSLEPRIRFLVEIMG+KLDEVAEYPDFFKHGLKKKLELRHRL
Sbjct: 248 EIVSMVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPDFFKHGLKKKLELRHRL 307

Query: 301 LKEKKVDFTLSELLECNQKKFMMKMGLL 329
           LKEK VDFTLSELLECNQKKFMMKMGLL
Sbjct: 308 LKEKNVDFTLSELLECNQKKFMMKMGLL 335

[Close]

BLAST of HG10005528 vs. ExPASy TrEMBL
Match: A0A1S3BQA2 (transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC103492550 PE=3 SV=1)

HSP 1 Score: 616.7 bits (1589), Expect = 5.6e-173
Identity = 311/328 (94.82%), Postives = 319/328 (97.26%), Query Frame = 0


Query: 1   MEISASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQKERASENWEYLEGIGIQKRK 60
           ME SAS+NGNCMLWFFRDKGFDDRSIDKMFRKCRRLED Q ERASENWEYLE IGIQKRK
Sbjct: 1   MESSASQNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDTQNERASENWEYLERIGIQKRK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKSNEIASAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILALGLQEKLVPMVECLATLSTK +EIA+AIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGFGLTKEGVIGKVLAKNPFL 180
           AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAG GLTKEGVIGKVLAKNPFL
Sbjct: 121 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180

Query: 181 MGYSVDKRLRPTLEFLKSIGLNEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDG 240
           MGYSVDKRLRPT+EFLKSIGLN+MDLQAVALKFPDILCRDVDKVLR NLDYLR RGFKDG
Sbjct: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRSNLDYLRSRGFKDG 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGKKLDEVAEYPDFFKHGLKKKLELRHRL 300
           EIVS+VTGYPP+LIKSIQHSLEPRIRFLVEIMG+KLDEVAEYPDFFKHGLKKKLELRHRL
Sbjct: 241 EIVSMVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPDFFKHGLKKKLELRHRL 300

Query: 301 LKEKKVDFTLSELLECNQKKFMMKMGLL 329
           LKEK VDFTLSELLECNQKKFMMKMGLL
Sbjct: 301 LKEKNVDFTLSELLECNQKKFMMKMGLL 328

[Close]

BLAST of HG10005528 vs. ExPASy TrEMBL
Match: A0A0A0K108 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029940 PE=3 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 3.6e-172
Identity = 311/328 (94.82%), Postives = 318/328 (96.95%), Query Frame = 0


Query: 1   MEISASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQKERASENWEYLEGIGIQKRK 60
           ME SASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQ ERASENWEYLE IGIQKRK
Sbjct: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKSNEIASAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILALGLQEKLVPMVECLATLSTK +EIA+AIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGFGLTKEGVIGKVLAKNPFL 180
           AFFQALGVPEK LGKMILLNPRLISYSIESKLVETVDFLAG GLTKEGVIGKVLAKNPFL
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180

Query: 181 MGYSVDKRLRPTLEFLKSIGLNEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDG 240
           MGYSVDKRLRPT+EFLKSIGLN+MDLQAVALKFPDILCRDVDKVLR NLDYLR RGFKDG
Sbjct: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGKKLDEVAEYPDFFKHGLKKKLELRHRL 300
           EIVSLVTGYPP+LIKSIQHSLEPRIRFLVEIMG+KL+EVAEYPDFFKHGLKKKLELRHRL
Sbjct: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300

Query: 301 LKEKKVDFTLSELLECNQKKFMMKMGLL 329
           LKEK VDF LSELLECNQKKFMMKMGLL
Sbjct: 301 LKEKNVDFALSELLECNQKKFMMKMGLL 328

[Close]

BLAST of HG10005528 vs. ExPASy TrEMBL
Match: A0A6J1I081 (transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111468249 PE=3 SV=1)

HSP 1 Score: 591.7 bits (1524), Expect = 1.9e-165
Identity = 297/328 (90.55%), Postives = 310/328 (94.51%), Query Frame = 0


Query: 1   MEISASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQKERASENWEYLEGIGIQKRK 60
           MEIS SRNG  MLWFFRDKGFDD SIDKMF+KCRRLE MQ ERA+ENWEYLEGIGIQKRK
Sbjct: 1   MEISGSRNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKSNEIASAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKIL LGLQEK+ PMVECLATL+TK  EIA+AIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLTTKPREIATAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGFGLTKEGVIGKVLAKNPFL 180
           AFFQALGVPEK LGKMILLNPRLISYSIESKL+ETVDFLAG GLTKEG+IGKVL KNPFL
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFL 180

Query: 181 MGYSVDKRLRPTLEFLKSIGLNEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDG 240
           +GYSV KRLRPT EFLKSIGL+EMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDG
Sbjct: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDG 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGKKLDEVAEYPDFFKHGLKKKLELRHRL 300
           EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMG+ LDEVAEYP+FFKHGLKK+LELRHRL
Sbjct: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRL 300

Query: 301 LKEKKVDFTLSELLECNQKKFMMKMGLL 329
           LKEK +DFTLSELLECNQKKFMMKM LL
Sbjct: 301 LKEKTMDFTLSELLECNQKKFMMKMSLL 328

[Close]

BLAST of HG10005528 vs. ExPASy TrEMBL
Match: A0A6J1GLD3 (transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111455322 PE=3 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 2.5e-165
Identity = 297/328 (90.55%), Postives = 311/328 (94.82%), Query Frame = 0


Query: 1   MEISASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQKERASENWEYLEGIGIQKRK 60
           MEIS SRNG  MLWFFRDKGFDD SIDKMF+KCRRLE MQ ERA+ENWEYLEGIGIQKRK
Sbjct: 1   MEISGSRNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKSNEIASAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKIL LGLQEK+ PMVECLATLSTK  EIA+AIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGFGLTKEGVIGKVLAKNPFL 180
           AFFQALGVPEK LGKMILLNPRLISYSIESKL+ETVDFLAG GLTK+G+IGKVLAKNPFL
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKDGMIGKVLAKNPFL 180

Query: 181 MGYSVDKRLRPTLEFLKSIGLNEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDG 240
           +GYSV KRLRPT EFLKSIGL+EMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDG
Sbjct: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDG 240

Query: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGKKLDEVAEYPDFFKHGLKKKLELRHRL 300
           EIVSLVTGYPPILIKSIQHSLEPRI+FLVEIM +KLDEVAEYP+FFKHGLKK+LELRHRL
Sbjct: 241 EIVSLVTGYPPILIKSIQHSLEPRIKFLVEIMERKLDEVAEYPEFFKHGLKKRLELRHRL 300

Query: 301 LKEKKVDFTLSELLECNQKKFMMKMGLL 329
           LKEK +DFTLSELLECNQKKFMMKM LL
Sbjct: 301 LKEKTMDFTLSELLECNQKKFMMKMSLL 328

[Close]

BLAST of HG10005528 vs. TAIR 10
Match: AT4G38160.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 428.3 bits (1100), Expect = 5.5e-120
Identity = 209/321 (65.11%), Postives = 261/321 (81.31%), Query Frame = 0


Query: 8   NGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQKERASENWEYLEGI-GIQKRKLPSVVS 67
           N + ++WFFRDKGFDD SIDKM RKC++LE  Q + ASENW+YL  I GIQ+RKLP +VS
Sbjct: 5   NTSSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVS 64

Query: 68  KCPKILALGLQEKLVPMVECLATLSTKSNEIASAIAKFPGILSYSVEEKLCPLLAFFQAL 127
           +CPKIL L L E+L+PMVECL++L     E+ASAI KFP ILS+SVEEKLCPLLAFFQAL
Sbjct: 65  RCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQAL 124

Query: 128 GVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGFGLTKEGVIGKVLAKNPFLMGYSVD 187
           GVPE  LGKMIL NPRLISYSI++KL   V FLA  GL ++G+IGKVL KNPFLMGYSVD
Sbjct: 125 GVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVD 184

Query: 188 KRLRPTLEFLK-SIGLNEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDGEIVSL 247
           KRLRPT EFLK S+GL+E  +++V + FP +LCRDV+K+L+PN DYL+  GF D +I ++
Sbjct: 185 KRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATM 244

Query: 248 VTGYPPILIKSIQHSLEPRIRFLVEIMGKKLDEVAEYPDFFKHGLKKKLELRHRLLKEKK 307
           VTGYP ILIKS+++SL+PRIRFLV++MG+ +DEVA YP+FF HGLKKK+E R +L+K+  
Sbjct: 245 VTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNN 304

Query: 308 VDFTLSELLECNQKKFMMKMG 327
           +D +L E+L+CN KKF  K G
Sbjct: 305 IDCSLREMLDCNTKKFHEKFG 325

[Close]

BLAST of HG10005528 vs. TAIR 10
Match: AT4G38160.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 428.3 bits (1100), Expect = 5.5e-120
Identity = 209/321 (65.11%), Postives = 261/321 (81.31%), Query Frame = 0


Query: 8   NGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQKERASENWEYLEGI-GIQKRKLPSVVS 67
           N + ++WFFRDKGFDD SIDKM RKC++LE  Q + ASENW+YL  I GIQ+RKLP +VS
Sbjct: 5   NTSSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVS 64

Query: 68  KCPKILALGLQEKLVPMVECLATLSTKSNEIASAIAKFPGILSYSVEEKLCPLLAFFQAL 127
           +CPKIL L L E+L+PMVECL++L     E+ASAI KFP ILS+SVEEKLCPLLAFFQAL
Sbjct: 65  RCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQAL 124

Query: 128 GVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGFGLTKEGVIGKVLAKNPFLMGYSVD 187
           GVPE  LGKMIL NPRLISYSI++KL   V FLA  GL ++G+IGKVL KNPFLMGYSVD
Sbjct: 125 GVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVD 184

Query: 188 KRLRPTLEFLK-SIGLNEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDGEIVSL 247
           KRLRPT EFLK S+GL+E  +++V + FP +LCRDV+K+L+PN DYL+  GF D +I ++
Sbjct: 185 KRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATM 244

Query: 248 VTGYPPILIKSIQHSLEPRIRFLVEIMGKKLDEVAEYPDFFKHGLKKKLELRHRLLKEKK 307
           VTGYP ILIKS+++SL+PRIRFLV++MG+ +DEVA YP+FF HGLKKK+E R +L+K+  
Sbjct: 245 VTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNN 304

Query: 308 VDFTLSELLECNQKKFMMKMG 327
           +D +L E+L+CN KKF  K G
Sbjct: 305 IDCSLREMLDCNTKKFHEKFG 325

[Close]

BLAST of HG10005528 vs. TAIR 10
Match: AT4G38160.3 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 428.3 bits (1100), Expect = 5.5e-120
Identity = 209/321 (65.11%), Postives = 261/321 (81.31%), Query Frame = 0


Query: 8   NGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQKERASENWEYLEGI-GIQKRKLPSVVS 67
           N + ++WFFRDKGFDD SIDKM RKC++LE  Q + ASENW+YL  I GIQ+RKLP +VS
Sbjct: 5   NTSSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVS 64

Query: 68  KCPKILALGLQEKLVPMVECLATLSTKSNEIASAIAKFPGILSYSVEEKLCPLLAFFQAL 127
           +CPKIL L L E+L+PMVECL++L     E+ASAI KFP ILS+SVEEKLCPLLAFFQAL
Sbjct: 65  RCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQAL 124

Query: 128 GVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGFGLTKEGVIGKVLAKNPFLMGYSVD 187
           GVPE  LGKMIL NPRLISYSI++KL   V FLA  GL ++G+IGKVL KNPFLMGYSVD
Sbjct: 125 GVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVD 184

Query: 188 KRLRPTLEFLK-SIGLNEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDGEIVSL 247
           KRLRPT EFLK S+GL+E  +++V + FP +LCRDV+K+L+PN DYL+  GF D +I ++
Sbjct: 185 KRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATM 244

Query: 248 VTGYPPILIKSIQHSLEPRIRFLVEIMGKKLDEVAEYPDFFKHGLKKKLELRHRLLKEKK 307
           VTGYP ILIKS+++SL+PRIRFLV++MG+ +DEVA YP+FF HGLKKK+E R +L+K+  
Sbjct: 245 VTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNN 304

Query: 308 VDFTLSELLECNQKKFMMKMG 327
           +D +L E+L+CN KKF  K G
Sbjct: 305 IDCSLREMLDCNTKKFHEKFG 325

[Close]

BLAST of HG10005528 vs. TAIR 10
Match: AT1G78930.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 136.7 bits (343), Expect = 3.3e-32
Identity = 103/356 (28.93%), Postives = 166/356 (46.63%), Query Frame = 0


Query: 2   EISASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQKERASENW-EYLEGIGIQKRK 61
           +I A R G  ML      G  D S   +     RL  + +E   +   E+LE IGI K  
Sbjct: 227 KIEARRGGLDML------GSVDASFRFLLESFPRLLLLSEENDMKPMVEFLESIGIPKYC 286

Query: 62  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKSNEIASAIAKFPGILSYSVEEKLCPLL 121
           L  V+   P I+    +E    +   +  +S  + +    + K+P ILS S++E    + 
Sbjct: 287 LGKVLLLYPPIMLGKTEEIKRRVATAMEKVSVVNKDSGKLLLKYPWILSPSIQENYSHIG 346

Query: 122 AFFQA-----------------------------------LGVPEKHLGKMILLNPRLIS 181
           +FF +                                   LGV +K +GK+I   P+L+ 
Sbjct: 347 SFFYSESVLKMDIDHAIRRWPLLLGCSASNMEMMVKEFDKLGVRDKRMGKVIPKMPQLLL 406

Query: 182 YSIESKLVETVDFLAGFGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTLEFLKSIGLNEMD 241
                + ++ V FL   G  KE ++G++L + P + G S++K L+  L FL   G++   
Sbjct: 407 CK-PQEFLKVVCFLEDLGFQKE-IVGQILCRCPEIFGCSIEKTLQKKLIFLTRFGVSTTH 466

Query: 242 LQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDGEIVSLVTGYPPILIKSIQHSLEPRI 301
              +  K+P+ L  D DK + P L YL   G  + EI  ++  + PIL  SI   L P+ 
Sbjct: 467 FPRIIKKYPEFLIYDADKTVLPRLKYLMEIGISEREIAFMIRKFSPILGYSIDKVLRPKF 526

Query: 302 RFLVEIMGKKLDEVAEYPDFFKHGLKKKLELRHRLLKEKKVDFTLSELLECNQKKF 322
            FLV  M K + EV EYP +F + L+K+++ R R+LK + ++ TL E+L  N ++F
Sbjct: 527 EFLVNSMEKPVREVIEYPRYFSYSLEKRIKPRFRVLKGRNIECTLQEMLGKNDEEF 574

[Close]

BLAST of HG10005528 vs. TAIR 10
Match: AT2G21710.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 124.8 bits (312), Expect = 1.3e-28
Identity = 73/291 (25.09%), Postives = 147/291 (50.52%), Query Frame = 0


Query: 32  KCRRLEDMQKERASENWEYLEGIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLS 91
           +C  L     E      ++   +G+ +    ++V   PKI+     + +   +  L    
Sbjct: 304 RCPELLSFSMEEVKSRVDFFLKMGMNQNDFGTMVYDYPKIIGFFSFQVMEKKINYLKEFG 363

Query: 92  TKSNEIASAIAKFPGILSYSVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESK 151
             + E+   +A  P ++  S+EE+  PL+ +F  LG+P++ + +++++ P L    +E  
Sbjct: 364 LSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKT 423

Query: 152 LVETVDFLAGFGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTLEFLKS-IGLNEMDLQAVA 211
           +   V FL   G+  E  IG +L K P L+  S+ K++RP + FL +  G+ + D+  V 
Sbjct: 424 IAPKVRFLQEMGIPNE-AIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVI 483

Query: 212 LKFPDILCRDVDKVLRPNLDYLRRRGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVE 271
              P +L   +   L PN+ Y    G +  ++  ++  +P +L  ++  +L P+ R+L  
Sbjct: 484 AMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVD-NLRPKYRYLRR 543

Query: 272 IMGKKLDEVAEYPDFFKHGLKKKLELRHRLLKEKKVDFTLSELLECNQKKF 322
            M + L ++ E+P FF + L++++  RH ++ E +V+F L  +L C  ++F
Sbjct: 544 TMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNFKLRYMLACTDEEF 592

The following BLAST results are available for this feature:

BLAST of HG10005528 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887558.1	4.7e-174	94.51	transcription termination factor MTERF6, chloroplastic/mitochondrial [Benincasa ...	[more]
XP_008451174.1	1.2e-172	94.82	PREDICTED: transcription termination factor MTERF6, chloroplastic/mitochondrial ...	[more]
KAA0059582.1	1.2e-172	94.82	transcription termination factor MTERF6 [Cucumis melo var. makuwa] >TYK25788.1 t...	[more]
XP_004144567.1	7.5e-172	94.82	transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucumis sa...	[more]
XP_022969173.1	4.0e-165	90.55	transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucurbita ...	[more]

BLAST of HG10005528 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZL6	7.7e-119	65.11	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
F4IHL3	1.8e-27	25.09	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4JVI3	2.4e-27	26.90	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
B6TGN4	7.1e-24	21.09	Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MT...	[more]
Q9ZT96	1.0e-22	23.02	Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of HG10005528 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UUK2	5.6e-173	94.82	Transcription termination factor MTERF6 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BQA2	5.6e-173	94.82	transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Cucumis ...	[more]
A0A0A0K108	3.6e-172	94.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029940 PE=3 SV=1	[more]
A0A6J1I081	1.9e-165	90.55	transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Cucurbit...	[more]
A0A6J1GLD3	2.5e-165	90.55	transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Cucurbit...	[more]

BLAST of HG10005528 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38160.1	5.5e-120	65.11	Mitochondrial transcription termination factor family protein	[more]
AT4G38160.2	5.5e-120	65.11	Mitochondrial transcription termination factor family protein	[more]
AT4G38160.3	5.5e-120	65.11	Mitochondrial transcription termination factor family protein	[more]
AT1G78930.1	3.3e-32	28.93	Mitochondrial transcription termination factor family protein	[more]
AT2G21710.1	1.3e-28	25.09	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 134..165 e-value: 1.6E-4 score: 31.0 coord: 27..57 e-value: 740.0 score: 4.9 coord: 276..307 e-value: 8.8 score: 15.3 coord: 62..93 e-value: 19.0 score: 14.1 coord: 207..238 e-value: 0.02 score: 24.1 coord: 98..129 e-value: 2.7E-4 score: 30.2 coord: 171..202 e-value: 1.6E-7 score: 41.0 coord: 243..274 e-value: 0.43 score: 19.6
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 121..321 e-value: 4.4E-42 score: 144.1 coord: 12..169 e-value: 2.2E-24 score: 86.0
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 12..327
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 85..326 e-value: 1.0E-54 score: 187.5
None	No IPR available	PANTHER	PTHR13068:SF5	TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIAL	coord: 12..327

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005528.1	HG10005528.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0032502	developmental process
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003690	double-stranded DNA binding