HG10005504 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005504
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	SNF1-related protein kinase regulatory subunit beta-2-like isoform X1
Location	Chr07: 3101194 .. 3103031 (-)
RNA-Seq Expression	HG10005504
Synteny	HG10005504

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAATGGTGAGGGTAGGAAAAATGAAGAAAGCCCCTCTGGAGTCCATAAGTTTCAAGAGAATCATGACCAAAGGATGGACTGTGCAGACGATGCAGCACATAACAGTTACAACACTTGCTCGTTTTCGGAGTCCAGAATTCAGATTTCTCCACCAAGCTTAGGCTCACCACAAGCCCTCATCTTTAATCCTCAGGTTTGTTCTTTCATATCTTTGTTTGTTTTTTTTAAGTTCATGATTATGCACTCTCTCTCTCCCACTTCGTTGATTCTTTGAACTAAGGAATATTTCTGGACCTGGTTAATTGGGCGCTTCCGCATTTTCTTTTTAAAACTATGGGAATTTGTTCTAAGCATCCTGATATGTTAAATAATCGAATATGCAGATTATTGTCTCTTTTAAGCTTTTTGTTAATGAACGGTTGCATTACAGACGATGGGTCAATCTTTGTAACTGCTCACTTTTCTGTGAATTGTTGGATATATTCTTCTCCTTCTTTCACTCCAGATGAAGACGACTTGTTAGAAAACCTTTGCTTCTGATATTTTGTGTCAGGAAAATCACCGTCTTTAACTTCATCCTGAAAATTGTAATTCATGGTTGGTTAGATACATGTAACAAATTGCTCTTCGATATTTCTTTCTTTATAGAAAAGGAAAACTCTTCATTTTTCTTTTTATGATTAATATTAAGTGCAATTCAAGCTGTAAAGATGATCGATTTTCCTTTTCTATTATTTGTTGTCTGAAAGTACAAAAGAAAATAGAGCACCTAAAATTGGCATTAATTGCCTAATAACTATGCCAAAAGAGGGTCTCCTACACTGAGTGGGACCTTGTATTTATAAGGACAAATCCGCCAAAAATATACCTACTTCGGTTTATTGAACCACCAATAACACTCTAAAATTCACCCTCTCATAGTCTTGTTTTCATTCATCTTCACTTTTAGTACACTACAGTTTCCTAGTCAAGTCCTGGTCTGATGCTACAACCTCAATCTCAATCTTTGCCTCAGAGTGCTGCATTCAGTGAAAATGTGTTTCATGGGACAAGGACGCCAGTGACGATCTCTTGGAATCATGGCGGAAATCAAGTGGCCATCGTTGGATCATGGGACAACTGGCAGACGAGGTATTCGACTTTGATGATGTGCTTTTCTTCTTTGTCGTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTAACTCAAACAACCTTTAAGTGTGTTGAATTTCATGTATTTCTGTTAGAGAGCTCCTGCAGAACACAGGTGAGAAGTTTGTGGTTATAAAGAATCTGCTAGTCGGTATCTACCACTACCACTTCATAGTTGATGGTTGGTTGGTTTATGCTCCAGATCTACCCTGGTTTCGTGATGATTCAGGGAATGCTTACAATATTTTGGACTTGCAGGTAAGTTTCATGGCTTCCCATTGAGAATTTCGTGTTCCTCAAGAATGTCATTGCTGCTGCTCCACATAATTCTCATTGAATTATGTTTTCCAGGGGCATGTTCCTGAATTGCCTGAAAGTATGTCCGAGTTCGAAACTCCTCCATCCCCACCGTCGAGTTATGACAATCAATACTTGAATGAAGATGATTTCAGCAGACCTCCACCAGAACTACCTCCACAACTTCAAGGAACCATTTTAAACGATCCAACTTCTTCAGTTGATGGTCAACCGTTGCCAGTTACGCCTCAAAGTACAGAATTAAATCATCTCTATCTTCAGAGCAATGTCCAAGATCAGTTTGTAGCACTTGGCTCGACTCTCAGGATTCAGGAAAAGTATGTTACAATGTTTTTATTCAAGCCTTTATCAAGAACAAGGTGA

mRNA sequence

ATGGACAATGGTGAGGGTAGGAAAAATGAAGAAAGCCCCTCTGGAGTCCATAAGTTTCAAGAGAATCATGACCAAAGGATGGACTGTGCAGACGATGCAGCACATAACAGTTACAACACTTGCTCGTTTTCGGAGTCCAGAATTCAGATTTCTCCACCAAGCTTAGGCTCACCACAAGCCCTCATCTTTAATCCTCAGAGTGCTGCATTCAGTGAAAATGTGTTTCATGGGACAAGGACGCCAGTGACGATCTCTTGGAATCATGGCGGAAATCAAGTGGCCATCGTTGGATCATGGGACAACTGGCAGACGAGAGAGCTCCTGCAGAACACAGGTGAGAAGTTTGTGGTTATAAAGAATCTGCTAGTCGGTATCTACCACTACCACTTCATAGTTGATGGTTGGTTGGTTTATGCTCCAGATCTACCCTGGTTTCGTGATGATTCAGGGAATGCTTACAATATTTTGGACTTGCAGGGGCATGTTCCTGAATTGCCTGAAAGTATGTCCGAGTTCGAAACTCCTCCATCCCCACCGTCGAGTTATGACAATCAATACTTGAATGAAGATGATTTCAGCAGACCTCCACCAGAACTACCTCCACAACTTCAAGGAACCATTTTAAACGATCCAACTTCTTCAGTTGATGGTCAACCGTTGCCAGTTACGCCTCAAAGTACAGAATTAAATCATCTCTATCTTCAGAGCAATGTCCAAGATCAGTTTGTAGCACTTGGCTCGACTCTCAGGATTCAGGAAAAGTATGTTACAATGTTTTTATTCAAGCCTTTATCAAGAACAAGGTGA

Coding sequence (CDS)

ATGGACAATGGTGAGGGTAGGAAAAATGAAGAAAGCCCCTCTGGAGTCCATAAGTTTCAAGAGAATCATGACCAAAGGATGGACTGTGCAGACGATGCAGCACATAACAGTTACAACACTTGCTCGTTTTCGGAGTCCAGAATTCAGATTTCTCCACCAAGCTTAGGCTCACCACAAGCCCTCATCTTTAATCCTCAGAGTGCTGCATTCAGTGAAAATGTGTTTCATGGGACAAGGACGCCAGTGACGATCTCTTGGAATCATGGCGGAAATCAAGTGGCCATCGTTGGATCATGGGACAACTGGCAGACGAGAGAGCTCCTGCAGAACACAGGTGAGAAGTTTGTGGTTATAAAGAATCTGCTAGTCGGTATCTACCACTACCACTTCATAGTTGATGGTTGGTTGGTTTATGCTCCAGATCTACCCTGGTTTCGTGATGATTCAGGGAATGCTTACAATATTTTGGACTTGCAGGGGCATGTTCCTGAATTGCCTGAAAGTATGTCCGAGTTCGAAACTCCTCCATCCCCACCGTCGAGTTATGACAATCAATACTTGAATGAAGATGATTTCAGCAGACCTCCACCAGAACTACCTCCACAACTTCAAGGAACCATTTTAAACGATCCAACTTCTTCAGTTGATGGTCAACCGTTGCCAGTTACGCCTCAAAGTACAGAATTAAATCATCTCTATCTTCAGAGCAATGTCCAAGATCAGTTTGTAGCACTTGGCTCGACTCTCAGGATTCAGGAAAAGTATGTTACAATGTTTTTATTCAAGCCTTTATCAAGAACAAGGTGA

Protein sequence

MDNGEGRKNEESPSGVHKFQENHDQRMDCADDAAHNSYNTCSFSESRIQISPPSLGSPQALIFNPQSAAFSENVFHGTRTPVTISWNHGGNQVAIVGSWDNWQTRELLQNTGEKFVVIKNLLVGIYHYHFIVDGWLVYAPDLPWFRDDSGNAYNILDLQGHVPELPESMSEFETPPSPPSSYDNQYLNEDDFSRPPPELPPQLQGTILNDPTSSVDGQPLPVTPQSTELNHLYLQSNVQDQFVALGSTLRIQEKYVTMFLFKPLSRTR

Homology

[Close]

BLAST of HG10005504 vs. NCBI nr
Match: XP_038888562.1 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X2 [Benincasa hispida])

HSP 1 Score: 497.3 bits (1279), Expect = 8.4e-137
Identity = 243/268 (90.67%), Postives = 250/268 (93.28%), Query Frame = 0


Query: 1   MDNGEGRKNEESPSGVHKFQENHDQRMDCADDAAHNSYNTCSFSESRIQISPPSLGSPQA 60
           MDN EGRKNEE PSGVHKFQENHDQRMDC DD AH SYNTC+F ESRIQISP  LGS   
Sbjct: 1   MDNAEGRKNEEGPSGVHKFQENHDQRMDCVDDVAHTSYNTCTFFESRIQISPQILGS--E 60

Query: 61  LIFNPQSAAFSENVFHGTRTPVTISWNHGGNQVAIVGSWDNWQTRELLQNTGEKFVVIKN 120
           LI NP+SAAFSENV +GTRT VTISWNHGGNQVAIVGSWDNWQTRELLQNTGEKFVVIK 
Sbjct: 61  LISNPESAAFSENVLYGTRTRVTISWNHGGNQVAIVGSWDNWQTRELLQNTGEKFVVIKT 120

Query: 121 LLVGIYHYHFIVDGWLVYAPDLPWFRDDSGNAYNILDLQGHVPELPESMSEFETPPSPPS 180
           L VGIYHYHFIVDGWL+YAPDLPWFRDDSGNAYNILDLQGHV E PESMSEFETPPSPPS
Sbjct: 121 LPVGIYHYHFIVDGWLIYAPDLPWFRDDSGNAYNILDLQGHVSEFPESMSEFETPPSPPS 180

Query: 181 SYDNQYLNEDDFSRPPPELPPQLQGTILNDPTSSVDGQPLPVTPQSTELNHLYLQSNVQD 240
           SYDNQYL+EDDFSRPPPELPPQLQGTILNDP+SSVDG+PLPVTPQSTELNHLYLQSNVQD
Sbjct: 181 SYDNQYLHEDDFSRPPPELPPQLQGTILNDPSSSVDGRPLPVTPQSTELNHLYLQSNVQD 240

Query: 241 QFVALGSTLRIQEKYVTMFLFKPLSRTR 269
           QFVALGSTLRIQEKYVTMFLFKPLSRTR
Sbjct: 241 QFVALGSTLRIQEKYVTMFLFKPLSRTR 266

[Close]

BLAST of HG10005504 vs. NCBI nr
Match: XP_038888563.1 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X3 [Benincasa hispida])

HSP 1 Score: 497.3 bits (1279), Expect = 8.4e-137
Identity = 243/268 (90.67%), Postives = 250/268 (93.28%), Query Frame = 0


Query: 1   MDNGEGRKNEESPSGVHKFQENHDQRMDCADDAAHNSYNTCSFSESRIQISPPSLGSPQA 60
           MDN EGRKNEE PSGVHKFQENHDQRMDC DD AH SYNTC+F ESRIQISP  LGS   
Sbjct: 23  MDNAEGRKNEEGPSGVHKFQENHDQRMDCVDDVAHTSYNTCTFFESRIQISPQILGS--E 82

Query: 61  LIFNPQSAAFSENVFHGTRTPVTISWNHGGNQVAIVGSWDNWQTRELLQNTGEKFVVIKN 120
           LI NP+SAAFSENV +GTRT VTISWNHGGNQVAIVGSWDNWQTRELLQNTGEKFVVIK 
Sbjct: 83  LISNPESAAFSENVLYGTRTRVTISWNHGGNQVAIVGSWDNWQTRELLQNTGEKFVVIKT 142

Query: 121 LLVGIYHYHFIVDGWLVYAPDLPWFRDDSGNAYNILDLQGHVPELPESMSEFETPPSPPS 180
           L VGIYHYHFIVDGWL+YAPDLPWFRDDSGNAYNILDLQGHV E PESMSEFETPPSPPS
Sbjct: 143 LPVGIYHYHFIVDGWLIYAPDLPWFRDDSGNAYNILDLQGHVSEFPESMSEFETPPSPPS 202

Query: 181 SYDNQYLNEDDFSRPPPELPPQLQGTILNDPTSSVDGQPLPVTPQSTELNHLYLQSNVQD 240
           SYDNQYL+EDDFSRPPPELPPQLQGTILNDP+SSVDG+PLPVTPQSTELNHLYLQSNVQD
Sbjct: 203 SYDNQYLHEDDFSRPPPELPPQLQGTILNDPSSSVDGRPLPVTPQSTELNHLYLQSNVQD 262

Query: 241 QFVALGSTLRIQEKYVTMFLFKPLSRTR 269
           QFVALGSTLRIQEKYVTMFLFKPLSRTR
Sbjct: 263 QFVALGSTLRIQEKYVTMFLFKPLSRTR 288

[Close]

BLAST of HG10005504 vs. NCBI nr
Match: XP_011658663.1 (SNF1-related protein kinase regulatory subunit beta-2 isoform X4 [Cucumis sativus])

HSP 1 Score: 490.3 bits (1261), Expect = 1.0e-134
Identity = 242/268 (90.30%), Postives = 247/268 (92.16%), Query Frame = 0


Query: 1   MDNGEGRKNEESPSGVHKFQENHDQRMDCADDAAHNSYNTCSFSESRIQISPPSLGSPQA 60
           MDN EGRKNEE PSGV KFQENHDQRMDCADDAAHNS NT  FSESRIQISP SL S QA
Sbjct: 14  MDNAEGRKNEEGPSGV-KFQENHDQRMDCADDAAHNSCNTYVFSESRIQISPQSLASRQA 73

Query: 61  LIFNPQSAAFSENVFHGTRTPVTISWNHGGNQVAIVGSWDNWQTRELLQNTGEKFVVIKN 120
           LI NPQ AAF ENV HGTRT VTISWNHGGNQVAIVGSWDNWQTRELL NTGEKFVVIK 
Sbjct: 74  LISNPQIAAFRENVIHGTRTQVTISWNHGGNQVAIVGSWDNWQTRELLHNTGEKFVVIKT 133

Query: 121 LLVGIYHYHFIVDGWLVYAPDLPWFRDDSGNAYNILDLQGHVPELPESMSEFETPPSPPS 180
           L VGIYHYHFIVDGWL YAPDLPWF DDSGNAYNILDLQGHVPELPESMS+FETPPSPPS
Sbjct: 134 LPVGIYHYHFIVDGWLAYAPDLPWFHDDSGNAYNILDLQGHVPELPESMSDFETPPSPPS 193

Query: 181 SYDNQYLNEDDFSRPPPELPPQLQGTILNDPTSSVDGQPLPVTPQSTELNHLYLQSNVQD 240
           SYDNQYLNEDDFSRPPPELPP LQGT+LNDP+SSVDGQPLPVTPQ TELNHLYLQSNVQD
Sbjct: 194 SYDNQYLNEDDFSRPPPELPPHLQGTVLNDPSSSVDGQPLPVTPQRTELNHLYLQSNVQD 253

Query: 241 QFVALGSTLRIQEKYVTMFLFKPLSRTR 269
           QFVALGSTLRIQEK+VTMFLFKPLSR+R
Sbjct: 254 QFVALGSTLRIQEKHVTMFLFKPLSRSR 280

[Close]

BLAST of HG10005504 vs. NCBI nr
Match: XP_004144547.1 (SNF1-related protein kinase regulatory subunit beta-2 isoform X5 [Cucumis sativus] >KGN43408.1 hypothetical protein Csa_020548 [Cucumis sativus])

HSP 1 Score: 490.3 bits (1261), Expect = 1.0e-134
Identity = 242/268 (90.30%), Postives = 247/268 (92.16%), Query Frame = 0


Query: 1   MDNGEGRKNEESPSGVHKFQENHDQRMDCADDAAHNSYNTCSFSESRIQISPPSLGSPQA 60
           MDN EGRKNEE PSGV KFQENHDQRMDCADDAAHNS NT  FSESRIQISP SL S QA
Sbjct: 1   MDNAEGRKNEEGPSGV-KFQENHDQRMDCADDAAHNSCNTYVFSESRIQISPQSLASRQA 60

Query: 61  LIFNPQSAAFSENVFHGTRTPVTISWNHGGNQVAIVGSWDNWQTRELLQNTGEKFVVIKN 120
           LI NPQ AAF ENV HGTRT VTISWNHGGNQVAIVGSWDNWQTRELL NTGEKFVVIK 
Sbjct: 61  LISNPQIAAFRENVIHGTRTQVTISWNHGGNQVAIVGSWDNWQTRELLHNTGEKFVVIKT 120

Query: 121 LLVGIYHYHFIVDGWLVYAPDLPWFRDDSGNAYNILDLQGHVPELPESMSEFETPPSPPS 180
           L VGIYHYHFIVDGWL YAPDLPWF DDSGNAYNILDLQGHVPELPESMS+FETPPSPPS
Sbjct: 121 LPVGIYHYHFIVDGWLAYAPDLPWFHDDSGNAYNILDLQGHVPELPESMSDFETPPSPPS 180

Query: 181 SYDNQYLNEDDFSRPPPELPPQLQGTILNDPTSSVDGQPLPVTPQSTELNHLYLQSNVQD 240
           SYDNQYLNEDDFSRPPPELPP LQGT+LNDP+SSVDGQPLPVTPQ TELNHLYLQSNVQD
Sbjct: 181 SYDNQYLNEDDFSRPPPELPPHLQGTVLNDPSSSVDGQPLPVTPQRTELNHLYLQSNVQD 240

Query: 241 QFVALGSTLRIQEKYVTMFLFKPLSRTR 269
           QFVALGSTLRIQEK+VTMFLFKPLSR+R
Sbjct: 241 QFVALGSTLRIQEKHVTMFLFKPLSRSR 267

[Close]

BLAST of HG10005504 vs. NCBI nr
Match: XP_038888559.1 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X1 [Benincasa hispida] >XP_038888560.1 SNF1-related protein kinase regulatory subunit beta-2-like isoform X1 [Benincasa hispida] >XP_038888561.1 SNF1-related protein kinase regulatory subunit beta-2-like isoform X1 [Benincasa hispida])

HSP 1 Score: 486.9 bits (1252), Expect = 1.1e-133
Identity = 244/291 (83.85%), Postives = 251/291 (86.25%), Query Frame = 0


Query: 1   MDNGEGRKNEESPSGVHKFQENHDQRMDCADDAAHNSYNTCSFSESRIQISPPSLGS--- 60
           MDN EGRKNEE PSGVHKFQENHDQRMDC DD AH SYNTC+F ESRIQISP  LGS   
Sbjct: 1   MDNAEGRKNEEGPSGVHKFQENHDQRMDCVDDVAHTSYNTCTFFESRIQISPQILGSELI 60

Query: 61  --------------------PQALIFNPQSAAFSENVFHGTRTPVTISWNHGGNQVAIVG 120
                               PQ+L   PQSAAFSENV +GTRT VTISWNHGGNQVAIVG
Sbjct: 61  SNPEYATVSLSSPGLMLQPQPQSL---PQSAAFSENVLYGTRTRVTISWNHGGNQVAIVG 120

Query: 121 SWDNWQTRELLQNTGEKFVVIKNLLVGIYHYHFIVDGWLVYAPDLPWFRDDSGNAYNILD 180
           SWDNWQTRELLQNTGEKFVVIK L VGIYHYHFIVDGWL+YAPDLPWFRDDSGNAYNILD
Sbjct: 121 SWDNWQTRELLQNTGEKFVVIKTLPVGIYHYHFIVDGWLIYAPDLPWFRDDSGNAYNILD 180

Query: 181 LQGHVPELPESMSEFETPPSPPSSYDNQYLNEDDFSRPPPELPPQLQGTILNDPTSSVDG 240
           LQGHV E PESMSEFETPPSPPSSYDNQYL+EDDFSRPPPELPPQLQGTILNDP+SSVDG
Sbjct: 181 LQGHVSEFPESMSEFETPPSPPSSYDNQYLHEDDFSRPPPELPPQLQGTILNDPSSSVDG 240

Query: 241 QPLPVTPQSTELNHLYLQSNVQDQFVALGSTLRIQEKYVTMFLFKPLSRTR 269
           +PLPVTPQSTELNHLYLQSNVQDQFVALGSTLRIQEKYVTMFLFKPLSRTR
Sbjct: 241 RPLPVTPQSTELNHLYLQSNVQDQFVALGSTLRIQEKYVTMFLFKPLSRTR 288

[Close]

BLAST of HG10005504 vs. ExPASy Swiss-Prot
Match: Q9SCY5 (SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX=3702 GN=KINB2 PE=1 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 5.4e-46
Identity = 97/188 (51.60%), Postives = 125/188 (66.49%), Query Frame = 0


Query: 81  PVTISWNHGGNQVAIVGSWDNWQTRELLQNTGEKFVVIKNLLVGIYHYHFIVDGWLVYAP 140
           P  I+W HGG ++A+ GSWDNW+TR  LQ +G+ F ++K L  G+Y Y FIVDG   +AP
Sbjct: 103 PTMITWCHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFIVDGQWRHAP 162

Query: 141 DLPWFRDDSGNAYNILDLQGHVPELPESMSEFETPPSPPSSYDNQYLNEDDFSRPPPELP 200
           +LP  RDD+GN +NILDLQ +VPE  +S+S FE P SP +SY N  L  +D+S+ PP +P
Sbjct: 163 ELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVP 222

Query: 201 PQLQGTILNDPTSSVD-GQPLPVTPQSTELNHLYLQSNVQ-DQFVALGSTLRIQEKYVTM 260
           P LQ T+LN P ++ D   PLP  PQ   LNHLY+Q        VALGST R   KYVT+
Sbjct: 223 PHLQMTLLNLPAANPDIPSPLP-RPQHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTV 282

Query: 261 FLFKPLSR 267
            L+K L R
Sbjct: 283 VLYKSLQR 289

[Close]

BLAST of HG10005504 vs. ExPASy Swiss-Prot
Match: Q84VQ1 (SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX=3702 GN=KINB1 PE=1 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.7e-39
Identity = 84/187 (44.92%), Postives = 115/187 (61.50%), Query Frame = 0


Query: 81  PVTISWNHGGNQVAIVGSWDNWQTRELLQNTGEKFVVIKNLLVGIYHYHFIVDGWLVYAP 140
           P  I+WN GGN VA+ GSWDNW++R+ LQ +G+   ++  L  GIYHY  IVDG   Y P
Sbjct: 101 PTIITWNQGGNDVAVEGSWDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIP 160

Query: 141 DLPWFRDDSGNAYNILDLQGHVPELPESMSEFETPPSPPSSYDNQYLNEDDFSRPPPELP 200
           DLP+  D+ GN  NILD+   VPE PES+ EFE PPSP  SY       +D+++ P  +P
Sbjct: 161 DLPFVADEVGNVCNILDVHNFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVP 220

Query: 201 PQLQGTILNDPTSSVDGQPLPVTPQSTELNHLYLQSNVQDQ-FVALGSTLRIQEKYVTMF 260
           PQL  T+L     + +   +   PQ   LNH++++     Q  VALG T R + KY+T+ 
Sbjct: 221 PQLHLTLL----GTTEETAIATKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVV 280

Query: 261 LFKPLSR 267
           L+KPL+R
Sbjct: 281 LYKPLTR 283

[Close]

BLAST of HG10005504 vs. ExPASy Swiss-Prot
Match: O43741 (5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 7.4e-19
Identity = 71/198 (35.86%), Postives = 100/198 (50.51%), Query Frame = 0


Query: 81  PVTISWNHGGNQVAIVGSWDNWQTRELLQNTGEKFVVIKNLLVGIYHYHFIVDGWLVYAP 140
           P  I W+ GG +V I GS++NW T+  L  +   FV I +L  G + Y F VDG  V+ P
Sbjct: 78  PTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDP 137

Query: 141 DLPWFRDDSGNAYNILDLQGHVPEL-----PESMSEFET-----PPSPPSSYDNQ---YL 200
             P      G   N++ ++    E+      +SM   ET       SPP  Y  +   + 
Sbjct: 138 SEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYAFR 197

Query: 201 NEDDFSRPPPELPPQLQGTILNDPTS-SVDGQPLPVTPQSTELNHLYLQSNVQDQFVALG 260
           +E+ F + PP LPP L   ILN  T+ S D   LP  P    LNHLY  S ++D  + L 
Sbjct: 198 SEERF-KSPPILPPHLLQVILNKDTNISCDPALLP-EPNHVMLNHLYALS-IKDSVMVLS 257

Query: 261 STLRIQEKYVTMFLFKPL 265
           +T R ++KYVT  L+KP+
Sbjct: 258 ATHRYKKKYVTTLLYKPI 272

[Close]

BLAST of HG10005504 vs. ExPASy Swiss-Prot
Match: Q6PAM0 (5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 7.4e-19
Identity = 71/198 (35.86%), Postives = 100/198 (50.51%), Query Frame = 0


Query: 81  PVTISWNHGGNQVAIVGSWDNWQTRELLQNTGEKFVVIKNLLVGIYHYHFIVDGWLVYAP 140
           P  I W+ GG +V I GS++NW T+  L  +   FV I +L  G + Y F VDG  V+ P
Sbjct: 77  PTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDP 136

Query: 141 DLPWFRDDSGNAYNILDLQGHVPEL-----PESMSEFET-----PPSPPSSYDNQ---YL 200
             P      G   N++ ++    E+      +SM   ET       SPP  Y  +   + 
Sbjct: 137 SEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYVFR 196

Query: 201 NEDDFSRPPPELPPQLQGTILNDPTS-SVDGQPLPVTPQSTELNHLYLQSNVQDQFVALG 260
           +E+ F + PP LPP L   ILN  T+ S D   LP  P    LNHLY  S ++D  + L 
Sbjct: 197 SEERF-KSPPILPPHLLQVILNKDTNISCDPALLP-EPNHVMLNHLYALS-IKDSVMVLS 256

Query: 261 STLRIQEKYVTMFLFKPL 265
           +T R ++KYVT  L+KP+
Sbjct: 257 ATHRYKKKYVTTLLYKPI 271

[Close]

BLAST of HG10005504 vs. ExPASy Swiss-Prot
Match: Q9QZH4 (5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.6e-18
Identity = 71/198 (35.86%), Postives = 99/198 (50.00%), Query Frame = 0


Query: 81  PVTISWNHGGNQVAIVGSWDNWQTRELLQNTGEKFVVIKNLLVGIYHYHFIVDGWLVYAP 140
           P  I W+ GG +V I GS++NW T+  L  +   FV I +L  G + Y F VDG  V+ P
Sbjct: 77  PTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDP 136

Query: 141 DLPWFRDDSGNAYNILDLQGHVPEL-----PESMSEFET-----PPSPPSSYDNQ---YL 200
             P      G   N++ ++    E+      +SM   ET       SPP  Y  +   + 
Sbjct: 137 SEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYVFR 196

Query: 201 NEDDFSRPPPELPPQLQGTILNDPTS-SVDGQPLPVTPQSTELNHLYLQSNVQDQFVALG 260
           +E+ F + PP LPP L   ILN  T+ S D   LP  P    LNHLY  S  +D  + L 
Sbjct: 197 SEERF-KSPPILPPHLLQVILNKDTNISCDPALLP-EPNHVMLNHLYALS-TKDSVMVLS 256

Query: 261 STLRIQEKYVTMFLFKPL 265
           +T R ++KYVT  L+KP+
Sbjct: 257 ATHRYKKKYVTTLLYKPI 271

[Close]

BLAST of HG10005504 vs. ExPASy TrEMBL
Match: A0A0A0K1S5 (AMPKBI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G031690 PE=3 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 5.0e-135
Identity = 242/268 (90.30%), Postives = 247/268 (92.16%), Query Frame = 0


Query: 1   MDNGEGRKNEESPSGVHKFQENHDQRMDCADDAAHNSYNTCSFSESRIQISPPSLGSPQA 60
           MDN EGRKNEE PSGV KFQENHDQRMDCADDAAHNS NT  FSESRIQISP SL S QA
Sbjct: 1   MDNAEGRKNEEGPSGV-KFQENHDQRMDCADDAAHNSCNTYVFSESRIQISPQSLASRQA 60

Query: 61  LIFNPQSAAFSENVFHGTRTPVTISWNHGGNQVAIVGSWDNWQTRELLQNTGEKFVVIKN 120
           LI NPQ AAF ENV HGTRT VTISWNHGGNQVAIVGSWDNWQTRELL NTGEKFVVIK 
Sbjct: 61  LISNPQIAAFRENVIHGTRTQVTISWNHGGNQVAIVGSWDNWQTRELLHNTGEKFVVIKT 120

Query: 121 LLVGIYHYHFIVDGWLVYAPDLPWFRDDSGNAYNILDLQGHVPELPESMSEFETPPSPPS 180
           L VGIYHYHFIVDGWL YAPDLPWF DDSGNAYNILDLQGHVPELPESMS+FETPPSPPS
Sbjct: 121 LPVGIYHYHFIVDGWLAYAPDLPWFHDDSGNAYNILDLQGHVPELPESMSDFETPPSPPS 180

Query: 181 SYDNQYLNEDDFSRPPPELPPQLQGTILNDPTSSVDGQPLPVTPQSTELNHLYLQSNVQD 240
           SYDNQYLNEDDFSRPPPELPP LQGT+LNDP+SSVDGQPLPVTPQ TELNHLYLQSNVQD
Sbjct: 181 SYDNQYLNEDDFSRPPPELPPHLQGTVLNDPSSSVDGQPLPVTPQRTELNHLYLQSNVQD 240

Query: 241 QFVALGSTLRIQEKYVTMFLFKPLSRTR 269
           QFVALGSTLRIQEK+VTMFLFKPLSR+R
Sbjct: 241 QFVALGSTLRIQEKHVTMFLFKPLSRSR 267

[Close]

BLAST of HG10005504 vs. ExPASy TrEMBL
Match: A0A1S3CHJ2 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103500509 PE=3 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.4e-132
Identity = 245/290 (84.48%), Postives = 249/290 (85.86%), Query Frame = 0


Query: 1   MDNGEGRKNEESPSGVHKFQENHDQRMDCADDAAHNSYNTCSFSESRIQISPPSLGSPQA 60
           MDN EGRKNEE PSGV KFQENHDQRMDCADDAAHNS NT  FSESRIQISP SL S QA
Sbjct: 2   MDNAEGRKNEEGPSGV-KFQENHDQRMDCADDAAHNSNNTYMFSESRIQISPQSLASRQA 61

Query: 61  LIFN----------------------PQSAAFSENVFHGTRTPVTISWNHGGNQVAIVGS 120
           LI N                      PQ AAFSENV HGTRT VTISWNHGGNQVAIVGS
Sbjct: 62  LISNPQYATVFLSSPGLMLQPQPQSLPQIAAFSENVIHGTRTRVTISWNHGGNQVAIVGS 121

Query: 121 WDNWQTRELLQNTGEKFVVIKNLLVGIYHYHFIVDGWLVYAPDLPWFRDDSGNAYNILDL 180
           WDNW+TRELL NTGEKFVVIK L VGIYHYHFIVDGWL YAPDLPWFRDDSGNAYNILDL
Sbjct: 122 WDNWETRELLHNTGEKFVVIKTLPVGIYHYHFIVDGWLAYAPDLPWFRDDSGNAYNILDL 181

Query: 181 QGHVPELPESMSEFETPPSPPSSYDNQYLNEDDFSRPPPELPPQLQGTILNDPTSSVDGQ 240
           QGHVPELPESMS+FETPPSPPSSYDNQYLNEDDFSRPPPELPPQLQGTILNDP+SSVDGQ
Sbjct: 182 QGHVPELPESMSDFETPPSPPSSYDNQYLNEDDFSRPPPELPPQLQGTILNDPSSSVDGQ 241

Query: 241 PLPVTPQSTELNHLYLQSNVQDQFVALGSTLRIQEKYVTMFLFKPLSRTR 269
           PLPVTPQ TELNHLYLQSNVQDQFVALGSTLRIQ+KYVTMFLFKPLSR R
Sbjct: 242 PLPVTPQRTELNHLYLQSNVQDQFVALGSTLRIQKKYVTMFLFKPLSRPR 290

[Close]

BLAST of HG10005504 vs. ExPASy TrEMBL
Match: A0A1S3CG45 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X5 OS=Cucumis melo OX=3656 GN=LOC103500509 PE=3 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.4e-132
Identity = 245/290 (84.48%), Postives = 249/290 (85.86%), Query Frame = 0


Query: 1   MDNGEGRKNEESPSGVHKFQENHDQRMDCADDAAHNSYNTCSFSESRIQISPPSLGSPQA 60
           MDN EGRKNEE PSGV KFQENHDQRMDCADDAAHNS NT  FSESRIQISP SL S QA
Sbjct: 1   MDNAEGRKNEEGPSGV-KFQENHDQRMDCADDAAHNSNNTYMFSESRIQISPQSLASRQA 60

Query: 61  LIFN----------------------PQSAAFSENVFHGTRTPVTISWNHGGNQVAIVGS 120
           LI N                      PQ AAFSENV HGTRT VTISWNHGGNQVAIVGS
Sbjct: 61  LISNPQYATVFLSSPGLMLQPQPQSLPQIAAFSENVIHGTRTRVTISWNHGGNQVAIVGS 120

Query: 121 WDNWQTRELLQNTGEKFVVIKNLLVGIYHYHFIVDGWLVYAPDLPWFRDDSGNAYNILDL 180
           WDNW+TRELL NTGEKFVVIK L VGIYHYHFIVDGWL YAPDLPWFRDDSGNAYNILDL
Sbjct: 121 WDNWETRELLHNTGEKFVVIKTLPVGIYHYHFIVDGWLAYAPDLPWFRDDSGNAYNILDL 180

Query: 181 QGHVPELPESMSEFETPPSPPSSYDNQYLNEDDFSRPPPELPPQLQGTILNDPTSSVDGQ 240
           QGHVPELPESMS+FETPPSPPSSYDNQYLNEDDFSRPPPELPPQLQGTILNDP+SSVDGQ
Sbjct: 181 QGHVPELPESMSDFETPPSPPSSYDNQYLNEDDFSRPPPELPPQLQGTILNDPSSSVDGQ 240

Query: 241 PLPVTPQSTELNHLYLQSNVQDQFVALGSTLRIQEKYVTMFLFKPLSRTR 269
           PLPVTPQ TELNHLYLQSNVQDQFVALGSTLRIQ+KYVTMFLFKPLSR R
Sbjct: 241 PLPVTPQRTELNHLYLQSNVQDQFVALGSTLRIQKKYVTMFLFKPLSRPR 289

[Close]

BLAST of HG10005504 vs. ExPASy TrEMBL
Match: A0A1S3CHI7 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500509 PE=3 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.4e-132
Identity = 245/290 (84.48%), Postives = 249/290 (85.86%), Query Frame = 0


Query: 1   MDNGEGRKNEESPSGVHKFQENHDQRMDCADDAAHNSYNTCSFSESRIQISPPSLGSPQA 60
           MDN EGRKNEE PSGV KFQENHDQRMDCADDAAHNS NT  FSESRIQISP SL S QA
Sbjct: 14  MDNAEGRKNEEGPSGV-KFQENHDQRMDCADDAAHNSNNTYMFSESRIQISPQSLASRQA 73

Query: 61  LIFN----------------------PQSAAFSENVFHGTRTPVTISWNHGGNQVAIVGS 120
           LI N                      PQ AAFSENV HGTRT VTISWNHGGNQVAIVGS
Sbjct: 74  LISNPQYATVFLSSPGLMLQPQPQSLPQIAAFSENVIHGTRTRVTISWNHGGNQVAIVGS 133

Query: 121 WDNWQTRELLQNTGEKFVVIKNLLVGIYHYHFIVDGWLVYAPDLPWFRDDSGNAYNILDL 180
           WDNW+TRELL NTGEKFVVIK L VGIYHYHFIVDGWL YAPDLPWFRDDSGNAYNILDL
Sbjct: 134 WDNWETRELLHNTGEKFVVIKTLPVGIYHYHFIVDGWLAYAPDLPWFRDDSGNAYNILDL 193

Query: 181 QGHVPELPESMSEFETPPSPPSSYDNQYLNEDDFSRPPPELPPQLQGTILNDPTSSVDGQ 240
           QGHVPELPESMS+FETPPSPPSSYDNQYLNEDDFSRPPPELPPQLQGTILNDP+SSVDGQ
Sbjct: 194 QGHVPELPESMSDFETPPSPPSSYDNQYLNEDDFSRPPPELPPQLQGTILNDPSSSVDGQ 253

Query: 241 PLPVTPQSTELNHLYLQSNVQDQFVALGSTLRIQEKYVTMFLFKPLSRTR 269
           PLPVTPQ TELNHLYLQSNVQDQFVALGSTLRIQ+KYVTMFLFKPLSR R
Sbjct: 254 PLPVTPQRTELNHLYLQSNVQDQFVALGSTLRIQKKYVTMFLFKPLSRPR 302

[Close]

BLAST of HG10005504 vs. ExPASy TrEMBL
Match: A0A1S3CGJ9 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500509 PE=3 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.4e-132
Identity = 245/290 (84.48%), Postives = 249/290 (85.86%), Query Frame = 0


Query: 1   MDNGEGRKNEESPSGVHKFQENHDQRMDCADDAAHNSYNTCSFSESRIQISPPSLGSPQA 60
           MDN EGRKNEE PSGV KFQENHDQRMDCADDAAHNS NT  FSESRIQISP SL S QA
Sbjct: 23  MDNAEGRKNEEGPSGV-KFQENHDQRMDCADDAAHNSNNTYMFSESRIQISPQSLASRQA 82

Query: 61  LIFN----------------------PQSAAFSENVFHGTRTPVTISWNHGGNQVAIVGS 120
           LI N                      PQ AAFSENV HGTRT VTISWNHGGNQVAIVGS
Sbjct: 83  LISNPQYATVFLSSPGLMLQPQPQSLPQIAAFSENVIHGTRTRVTISWNHGGNQVAIVGS 142

Query: 121 WDNWQTRELLQNTGEKFVVIKNLLVGIYHYHFIVDGWLVYAPDLPWFRDDSGNAYNILDL 180
           WDNW+TRELL NTGEKFVVIK L VGIYHYHFIVDGWL YAPDLPWFRDDSGNAYNILDL
Sbjct: 143 WDNWETRELLHNTGEKFVVIKTLPVGIYHYHFIVDGWLAYAPDLPWFRDDSGNAYNILDL 202

Query: 181 QGHVPELPESMSEFETPPSPPSSYDNQYLNEDDFSRPPPELPPQLQGTILNDPTSSVDGQ 240
           QGHVPELPESMS+FETPPSPPSSYDNQYLNEDDFSRPPPELPPQLQGTILNDP+SSVDGQ
Sbjct: 203 QGHVPELPESMSDFETPPSPPSSYDNQYLNEDDFSRPPPELPPQLQGTILNDPSSSVDGQ 262

Query: 241 PLPVTPQSTELNHLYLQSNVQDQFVALGSTLRIQEKYVTMFLFKPLSRTR 269
           PLPVTPQ TELNHLYLQSNVQDQFVALGSTLRIQ+KYVTMFLFKPLSR R
Sbjct: 263 PLPVTPQRTELNHLYLQSNVQDQFVALGSTLRIQKKYVTMFLFKPLSRPR 311

[Close]

BLAST of HG10005504 vs. TAIR 10
Match: AT4G16360.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 186.0 bits (471), Expect = 3.9e-47
Identity = 97/188 (51.60%), Postives = 125/188 (66.49%), Query Frame = 0


Query: 81  PVTISWNHGGNQVAIVGSWDNWQTRELLQNTGEKFVVIKNLLVGIYHYHFIVDGWLVYAP 140
           P  I+W HGG ++A+ GSWDNW+TR  LQ +G+ F ++K L  G+Y Y FIVDG   +AP
Sbjct: 73  PTMITWCHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFIVDGQWRHAP 132

Query: 141 DLPWFRDDSGNAYNILDLQGHVPELPESMSEFETPPSPPSSYDNQYLNEDDFSRPPPELP 200
           +LP  RDD+GN +NILDLQ +VPE  +S+S FE P SP +SY N  L  +D+S+ PP +P
Sbjct: 133 ELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVP 192

Query: 201 PQLQGTILNDPTSSVD-GQPLPVTPQSTELNHLYLQSNVQ-DQFVALGSTLRIQEKYVTM 260
           P LQ T+LN P ++ D   PLP  PQ   LNHLY+Q        VALGST R   KYVT+
Sbjct: 193 PHLQMTLLNLPAANPDIPSPLP-RPQHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTV 252

Query: 261 FLFKPLSR 267
            L+K L R
Sbjct: 253 VLYKSLQR 259

[Close]

BLAST of HG10005504 vs. TAIR 10
Match: AT4G16360.3 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 186.0 bits (471), Expect = 3.9e-47
Identity = 97/188 (51.60%), Postives = 125/188 (66.49%), Query Frame = 0


Query: 81  PVTISWNHGGNQVAIVGSWDNWQTRELLQNTGEKFVVIKNLLVGIYHYHFIVDGWLVYAP 140
           P  I+W HGG ++A+ GSWDNW+TR  LQ +G+ F ++K L  G+Y Y FIVDG   +AP
Sbjct: 75  PTMITWCHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFIVDGQWRHAP 134

Query: 141 DLPWFRDDSGNAYNILDLQGHVPELPESMSEFETPPSPPSSYDNQYLNEDDFSRPPPELP 200
           +LP  RDD+GN +NILDLQ +VPE  +S+S FE P SP +SY N  L  +D+S+ PP +P
Sbjct: 135 ELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVP 194

Query: 201 PQLQGTILNDPTSSVD-GQPLPVTPQSTELNHLYLQSNVQ-DQFVALGSTLRIQEKYVTM 260
           P LQ T+LN P ++ D   PLP  PQ   LNHLY+Q        VALGST R   KYVT+
Sbjct: 195 PHLQMTLLNLPAANPDIPSPLP-RPQHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTV 254

Query: 261 FLFKPLSR 267
            L+K L R
Sbjct: 255 VLYKSLQR 261

[Close]

BLAST of HG10005504 vs. TAIR 10
Match: AT4G16360.2 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 179.9 bits (455), Expect = 2.8e-45
Identity = 96/188 (51.06%), Postives = 124/188 (65.96%), Query Frame = 0


Query: 81  PVTISWNHGGNQVAIVGSWDNWQTRELLQNTGEKFVVIKNLLVGIYHYHFIVDGWLVYAP 140
           P  I+W HGG ++A+ GSWDNW+T   LQ +G+ F ++K L  G+Y Y FIVDG   +AP
Sbjct: 73  PTMITWCHGGKEIAVEGSWDNWKTSR-LQRSGKDFTIMKVLPSGVYEYRFIVDGQWRHAP 132

Query: 141 DLPWFRDDSGNAYNILDLQGHVPELPESMSEFETPPSPPSSYDNQYLNEDDFSRPPPELP 200
           +LP  RDD+GN +NILDLQ +VPE  +S+S FE P SP +SY N  L  +D+S+ PP +P
Sbjct: 133 ELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVP 192

Query: 201 PQLQGTILNDPTSSVD-GQPLPVTPQSTELNHLYLQSNVQ-DQFVALGSTLRIQEKYVTM 260
           P LQ T+LN P ++ D   PLP  PQ   LNHLY+Q        VALGST R   KYVT+
Sbjct: 193 PHLQMTLLNLPAANPDIPSPLP-RPQHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTV 252

Query: 261 FLFKPLSR 267
            L+K L R
Sbjct: 253 VLYKSLQR 258

[Close]

BLAST of HG10005504 vs. TAIR 10
Match: AT5G21170.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 164.5 bits (415), Expect = 1.2e-40
Identity = 84/187 (44.92%), Postives = 115/187 (61.50%), Query Frame = 0


Query: 81  PVTISWNHGGNQVAIVGSWDNWQTRELLQNTGEKFVVIKNLLVGIYHYHFIVDGWLVYAP 140
           P  I+WN GGN VA+ GSWDNW++R+ LQ +G+   ++  L  GIYHY  IVDG   Y P
Sbjct: 101 PTIITWNQGGNDVAVEGSWDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIP 160

Query: 141 DLPWFRDDSGNAYNILDLQGHVPELPESMSEFETPPSPPSSYDNQYLNEDDFSRPPPELP 200
           DLP+  D+ GN  NILD+   VPE PES+ EFE PPSP  SY       +D+++ P  +P
Sbjct: 161 DLPFVADEVGNVCNILDVHNFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVP 220

Query: 201 PQLQGTILNDPTSSVDGQPLPVTPQSTELNHLYLQSNVQDQ-FVALGSTLRIQEKYVTMF 260
           PQL  T+L     + +   +   PQ   LNH++++     Q  VALG T R + KY+T+ 
Sbjct: 221 PQLHLTLL----GTTEETAIATKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVV 280

Query: 261 LFKPLSR 267
           L+KPL+R
Sbjct: 281 LYKPLTR 283

[Close]

BLAST of HG10005504 vs. TAIR 10
Match: AT5G21170.2 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 164.5 bits (415), Expect = 1.2e-40
Identity = 84/187 (44.92%), Postives = 115/187 (61.50%), Query Frame = 0


Query: 81  PVTISWNHGGNQVAIVGSWDNWQTRELLQNTGEKFVVIKNLLVGIYHYHFIVDGWLVYAP 140
           P  I+WN GGN VA+ GSWDNW++R+ LQ +G+   ++  L  GIYHY  IVDG   Y P
Sbjct: 138 PTIITWNQGGNDVAVEGSWDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIP 197

Query: 141 DLPWFRDDSGNAYNILDLQGHVPELPESMSEFETPPSPPSSYDNQYLNEDDFSRPPPELP 200
           DLP+  D+ GN  NILD+   VPE PES+ EFE PPSP  SY       +D+++ P  +P
Sbjct: 198 DLPFVADEVGNVCNILDVHNFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVP 257

Query: 201 PQLQGTILNDPTSSVDGQPLPVTPQSTELNHLYLQSNVQDQ-FVALGSTLRIQEKYVTMF 260
           PQL  T+L     + +   +   PQ   LNH++++     Q  VALG T R + KY+T+ 
Sbjct: 258 PQLHLTLL----GTTEETAIATKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVV 317

Query: 261 LFKPLSR 267
           L+KPL+R
Sbjct: 318 LYKPLTR 320

The following BLAST results are available for this feature:

BLAST of HG10005504 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888562.1	8.4e-137	90.67	SNF1-related protein kinase regulatory subunit beta-2-like isoform X2 [Benincasa...	[more]
XP_038888563.1	8.4e-137	90.67	SNF1-related protein kinase regulatory subunit beta-2-like isoform X3 [Benincasa...	[more]
XP_011658663.1	1.0e-134	90.30	SNF1-related protein kinase regulatory subunit beta-2 isoform X4 [Cucumis sativu...	[more]
XP_004144547.1	1.0e-134	90.30	SNF1-related protein kinase regulatory subunit beta-2 isoform X5 [Cucumis sativu...	[more]
XP_038888559.1	1.1e-133	83.85	SNF1-related protein kinase regulatory subunit beta-2-like isoform X1 [Benincasa...	[more]

BLAST of HG10005504 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCY5	5.4e-46	51.60	SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX...	[more]
Q84VQ1	1.7e-39	44.92	SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX...	[more]
O43741	7.4e-19	35.86	5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2...	[more]
Q6PAM0	7.4e-19	35.86	5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab...	[more]
Q9QZH4	1.6e-18	35.86	5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=...	[more]

BLAST of HG10005504 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K1S5	5.0e-135	90.30	AMPKBI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G031690 PE=3...	[more]
A0A1S3CHJ2	1.4e-132	84.48	SNF1-related protein kinase regulatory subunit beta-2-like isoform X4 OS=Cucumis...	[more]
A0A1S3CG45	1.4e-132	84.48	SNF1-related protein kinase regulatory subunit beta-2-like isoform X5 OS=Cucumis...	[more]
A0A1S3CHI7	1.4e-132	84.48	SNF1-related protein kinase regulatory subunit beta-2-like isoform X2 OS=Cucumis...	[more]
A0A1S3CGJ9	1.4e-132	84.48	SNF1-related protein kinase regulatory subunit beta-2-like isoform X1 OS=Cucumis...	[more]

BLAST of HG10005504 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16360.1	3.9e-47	51.60	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.3	3.9e-47	51.60	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.2	2.8e-45	51.06	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT5G21170.1	1.2e-40	44.92	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT5G21170.2	1.2e-40	44.92	5'-AMP-activated protein kinase beta-2 subunit protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006828	Association with the SNF1 complex (ASC) domain	SMART	SM01010	AMPKBI_2	coord: 175..264 e-value: 1.1E-13 score: 61.4
IPR006828	Association with the SNF1 complex (ASC) domain	PFAM	PF04739	AMPKBI	coord: 194..263 e-value: 2.0E-15 score: 56.8
None	No IPR available	GENE3D	6.20.250.60		coord: 167..264 e-value: 1.1E-21 score: 78.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..188
None	No IPR available	PANTHER	PTHR46316:SF6	SNF1-RELATED KINASE REGULATORY SUBUNIT BETA-2	coord: 1..267
None	No IPR available	CDD	cd02859	E_set_AMPKbeta_like_N	coord: 81..157 e-value: 1.15583E-19 score: 78.7948
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10	Immunoglobulins	coord: 75..161 e-value: 3.4E-19 score: 70.5
IPR032640	AMP-activated protein kinase, glycogen-binding domain	PFAM	PF16561	AMPK1_CBM	coord: 81..159 e-value: 2.5E-24 score: 85.3
IPR043554	SNF1-related protein kinase regulatory subunit beta	PANTHER	PTHR46316	SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1	coord: 1..267
IPR037256	ASC domain superfamily	SUPERFAMILY	160219	AMPKBI-like	coord: 162..264
IPR014756	Immunoglobulin E-set	SUPERFAMILY	81296	E set domains	coord: 80..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005504.1	HG10005504.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005515	protein binding