HG10005486 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGCTCTTTCGGTTTTATAGAACCGTAAAGGAGCTGGATGGAGAAAAGGCCAAACCACCAAAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTCTCTCACTAATAATGCTCTCACAGGTTTCGCAAATGGAAACTGGGTTTTTCTTCAGCTAGTTGTGTAAAATGATTGTTTCTACTTCTTGGTTTCTTTCAAAAGAGGCGTGGGTTTTGATTGCTTCAAATGCTTGCTGCTGCTTGCTTCATAACTTCTAGAAGAAGAAGACAACTCGTTTTTTTTTTTCCAACCCAGTTGGTTTTTCTGCAATTCCTCTTCTGGGTTTGATTCCTTTTCCTTGTGGGGTTCTTGTATACCTCTGATCTTGACGATTTCGTGACTTGGGTTGTGTGTTACCTTGTGGGTTTTGCTCCAATTTCTATTTAAAGCACTTGTATTTCGATGTGCTTTTTTATTGGGACTGGTCTTCTCAAGCTGCTGAGAGATTCATAAGTGGGGATTTTAGAGAAAACCATGTCTCAAAATTCTAATCTCTCTTGTTCTAAGGTCAGATTACTAGCTGGTTTCAAGGTGAAGAGGGCTAAGGAGCATTTCCATGGGCAACGGTGGAGTTATCTACTTTATTTCTTGCCATTTGGCGTAATTTTGATTCTGGGTCTTTGGTATATTTTTAGTCTTTGTGATGGGAGTTCAGTTCGGGAAGTGGAGATTCCAAATACGTGTAAAGAGAAGACCTGGAACTTTCTGAAGCATTTCAATGTCAGTGAGAGTCAGTTTCATGCTTTGGATTCGTTCTTCTTTCATTCAGATCAGGTACCTTTCCCTGAGCTCTCTCATCTTTTGATCTGTATACCTCTACTTTCACTTTCTGAACACTTTCGATCATAGCTTTGAACTTTCCTCAAGATATAAGATGATATCTCGTGATGATAATGCCCTTTCTGCGATGTATAACCGTTAGCAATTTATTGAGAATTGGTTTTCAATTTATAAGCACAACATCCTTGGTTGGATGTGTTGCTGAAAATCTTGTCATAAGGTACTAACCTGTTTTCTCGTGAATGTGGATAAAGCGGCAACTTGTTTGTTAAGAAAGAAAGAGAAATTGGAAAAATAGAATGTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTCCTTGTCATCTGCACAATGAAAAATAGATTGTGTTTATTCACTTAATTGCCATCCACAGAGCACAATGACTTGGGTTTAAGGAACTTGAAGGATATATATTCTGAATGCTTTCTATCTTATTAATTCCTTTTTGGCAAACTGTCCATACAAAGACAAACATTTTTGTGCCATTTTCCACTCCACACCAAACCAGTTAGTTCCCTATATATAAGCGCTCTTTCATGATTGATCGAAGTATAGAACATCGATTATTTTGAGAAATGCCTAGAAGGTAGTGTATTATTTTCTCCACCCCCTATCTGTTTTGCTAACAGAAGAACCAGAATTTCTCTGTACTCCCCACATTCCTTCTAACTACGAACTTCCACCCCACTGTATTCCCTTCCCATTGTTCACTAACATTGTGCTTCGGCTCCACCATCACATAGAAGTTGGGAAATGATTACAATATTAAGCCAAAATGCCCTAAGGCGTTACAGTTCTCCAGCCTATTTGAGAGGGCTGGGATCTCTCCTTTTCTCTAAGGACTTCCTTACAGAGAAAAAGCATAAACCCTACTAATAACAAGGTATACTAATATATACTGACCACACTCGCTCCCATACAACATTTTGTGGTCCCCACCAAGTATTTACTAACTAACTTTCATGCGAAATTCCCTTTCTTGCCCCTTCGTGGATATGTAATCAGTATTGGTGGCCTAACAAGGGTTGGTGCCATCCATGCATCTTTTGAAAATTGGACCCATGAGCTATTAAAGTGCCCTTTTATTGTAGCAATGCTCCACCAAGATAAGATAACACCCGCTTCCTCAATGGAATACAGCCTCTCTGCTTACTAAGTTCATGTAATTGTTAGGTAAGTTAATGCCACACATTAGTGATTGTTTCTTACCAAAAAAGAGTGTCTAAGTATCTATTCTGTATTAGTCTTTAGGCCAGAAGGTACTTCAAAGATTCTCATTACATTGAAAAAGTTGCCCATTTTTTCCTTTTCATCCTTACAATGGAGTAAGGTGTCATCTAAAACTTCTGAGTTATGGGTCATTTTTCATAATAAAAGAATCTTCCGACCATCACTATCTATTCTTTGCTCAATCACACATAGGACATCACCATTCACCAACTATGACACAGAAAAAGGATAAAGAGGAAACCCTGCATTCATCTCTTTGATGCCTTGATCTGTACCCAAAGATTTATTTTAAAAAAAAAATTGAAAAAGATAGAAAAATTGGTTAGATAAATAATCCCCTAATGATCTATGTTTGTCCTGAATTTCTTTCCTCTCCATATTACTTATTAGTCCACTCAATTGGTATCTATTGATTATTAATTGCTCGTCCAAAACAAATCTTTATGTGCTTGATGAATTCTTTAATTGCTACAATTCATGTAAGTGCCAACTAATATGCTCATTCTCACCAAATGTGTATTGCAGACAGCATCTCTCCTGTGTGCTAAAGACTCAGAGCCTGGCAATGCACTGAAAGACTGCATTCCTTGTGCATTGAAGATTTTAGAACGGGAACAAGACTCGCAAAAGAAGCATGGGTGGCTTTCTGAAGATCTACAACCTGAAGGCCAGTGCCCAACTAGGGGTGAGATGGACTCCTTCAATATTGATCTATTGCAGTTAGTGGACAAGACACAACCGCTTACTTCAAAATCTTCTTTTTCATTTGTGTCTCCCTGTCTTCAGATTCATAGAGAGGTTAGACTTTTGTTGCCAAATATTTTCTTTTCTGGTTGATGGGTTACGACAAGACTGTCTTTTTTCCTTTCTGTTGAGAGTTTTAAAAATGGATATGTGTTTTAGAAAGCATTTGGGAAATATAAGAGGATTTATTTCCTTAAGGAATGGTAGGCGTGCAATTGATGGTTAACCAGTCAGCGAAACCCTAACAAACTTTAACTTTAGGAGAAATGTACTCAATAGGTGCAATTTCATGTTTTAGGCAATATTATTTACCCCTTGTGTTATAACTTGTCCTGTGCCCATGAAATTTGGATAGTAAGTCTATAAATCTCTTCCATTCAAATGTTATGCTGAAGTATAGGCACTATGCCCAAGGAAAACCAACTATTAGACGTTCTTGAGTGCTGTTATGGTTTGTGCTTGAAGCCTGGTATCTCTACGTGTTTTAGTGGGTCAAATGAAATTTTAGAATTAACCTTTAGAAACTTCTCTTTCTCAGGCAGGGACATATTCTCCTGTAATTCTCTATCCATCAGCATAAGAATTTTAAAGTGCTGAAATAACCGTGAGTGATGATTTAATTTATTGATTCATGTTTTTTTCTGGCTTTCATCAGAGGATCTTGCATACTAGGGAAATTGGAACTGAGCATTCTCGAAGTTTGAATGGATTAGTAATGGCATGCTTATGGGTCCTTGCTGTAGTGATATCATGCCTGAAGATGTCTAGTTTTCATTTGAAATTAAGGAACCACAAACACAAGCCAATAAAGCATCCATCGGTTGAGAATCAGCCAGTGATTCAGCTACAGCAGGTGTTGCTACAGCAGAAGCAGTTAGATCTATCTCCAAGTCCTCCTAAAGGGGCTGGAAAATGGAGAAAGAAGCTTCTTATAATATTTGTTTTACTTGGAATTACCGGATCCTTTTGGCTCTTTTGGTATTTGAACAACAAAATCATCTTGAGGAGAGAAGAAACACTTTCTAACATGTGCGATGAGCGAGCTCGAATGTTACAGGATCAATTCAACGTTAGCATGAACCATGTTCATGCCTTGGCTATTCTGGTCTCCACTTTCCATCATGGCAAGCATCCTTCTGCCATTGATCAGGCAAGTGACTATCTATCTCTTTTGTTATTTGTGCAACTTCATTTTTGGCTACTTTGA ATGATGCTCTTTCGGTTTTATAGAACCGTAAAGGAGCTGGATGGAGAAAAGGCCAAACCACCAAAGGTCAGATTACTAGCTGGTTTCAAGGTGAAGAGGGCTAAGGAGCATTTCCATGGGCAACGGTGGAGTTATCTACTTTATTTCTTGCCATTTGGCGTAATTTTGATTCTGGGTCTTTGGTATATTTTTAGTCTTTGTGATGGGAGTTCAGTTCGGGAAGTGGAGATTCCAAATACGTGTAAAGAGAAGACCTGGAACTTTCTGAAGCATTTCAATGTCAGTGAGAGTCAGTTTCATGCTTTGGATTCGTTCTTCTTTCATTCAGATCAGACAGCATCTCTCCTGTGTGCTAAAGACTCAGAGCCTGGCAATGCACTGAAAGACTGCATTCCTTGTGCATTGAAGATTTTAGAACGGGAACAAGACTCGCAAAAGAAGCATGGGTGGCTTTCTGAAGATCTACAACCTGAAGGCCAGTGCCCAACTAGGGGTGAGATGGACTCCTTCAATATTGATCTATTGCAGTTAGTGGACAAGACACAACCGCTTACTTCAAAATCTTCTTTTTCATTTGTGTCTCCCTGTCTTCAGATTCATAGAGAGAGGATCTTGCATACTAGGGAAATTGGAACTGAGCATTCTCGAAGTTTGAATGGATTAGTAATGGCATGCTTATGGGTCCTTGCTGTAGTGATATCATGCCTGAAGATGTCTAGTTTTCATTTGAAATTAAGGAACCACAAACACAAGCCAATAAAGCATCCATCGGTTGAGAATCAGCCAGTGATTCAGCTACAGCAGGTGTTGCTACAGCAGAAGCAGTTAGATCTATCTCCAAGTCCTCCTAAAGGGGCTGGAAAATGGAGAAAGAAGCTTCTTATAATATTTGTTTTACTTGGAATTACCGGATCCTTTTGGCTCTTTTGGTATTTGAACAACAAAATCATCTTGAGGAGAGAAGAAACACTTTCTAACATGTGCGATGAGCGAGCTCGAATGTTACAGGATCAATTCAACGTTAGCATGAACCATGTTCATGCCTTGGCTATTCTGGTCTCCACTTTCCATCATGGCAAGCATCCTTCTGCCATTGATCAGGCAAGTGACTATCTATCTCTTTTGTTATTTGTGCAACTTCATTTTTGGCTACTTTGA ATGATGCTCTTTCGGTTTTATAGAACCGTAAAGGAGCTGGATGGAGAAAAGGCCAAACCACCAAAGGTCAGATTACTAGCTGGTTTCAAGGTGAAGAGGGCTAAGGAGCATTTCCATGGGCAACGGTGGAGTTATCTACTTTATTTCTTGCCATTTGGCGTAATTTTGATTCTGGGTCTTTGGTATATTTTTAGTCTTTGTGATGGGAGTTCAGTTCGGGAAGTGGAGATTCCAAATACGTGTAAAGAGAAGACCTGGAACTTTCTGAAGCATTTCAATGTCAGTGAGAGTCAGTTTCATGCTTTGGATTCGTTCTTCTTTCATTCAGATCAGACAGCATCTCTCCTGTGTGCTAAAGACTCAGAGCCTGGCAATGCACTGAAAGACTGCATTCCTTGTGCATTGAAGATTTTAGAACGGGAACAAGACTCGCAAAAGAAGCATGGGTGGCTTTCTGAAGATCTACAACCTGAAGGCCAGTGCCCAACTAGGGGTGAGATGGACTCCTTCAATATTGATCTATTGCAGTTAGTGGACAAGACACAACCGCTTACTTCAAAATCTTCTTTTTCATTTGTGTCTCCCTGTCTTCAGATTCATAGAGAGAGGATCTTGCATACTAGGGAAATTGGAACTGAGCATTCTCGAAGTTTGAATGGATTAGTAATGGCATGCTTATGGGTCCTTGCTGTAGTGATATCATGCCTGAAGATGTCTAGTTTTCATTTGAAATTAAGGAACCACAAACACAAGCCAATAAAGCATCCATCGGTTGAGAATCAGCCAGTGATTCAGCTACAGCAGGTGTTGCTACAGCAGAAGCAGTTAGATCTATCTCCAAGTCCTCCTAAAGGGGCTGGAAAATGGAGAAAGAAGCTTCTTATAATATTTGTTTTACTTGGAATTACCGGATCCTTTTGGCTCTTTTGGTATTTGAACAACAAAATCATCTTGAGGAGAGAAGAAACACTTTCTAACATGTGCGATGAGCGAGCTCGAATGTTACAGGATCAATTCAACGTTAGCATGAACCATGTTCATGCCTTGGCTATTCTGGTCTCCACTTTCCATCATGGCAAGCATCCTTCTGCCATTGATCAGGCAAGTGACTATCTATCTCTTTTGTTATTTGTGCAACTTCATTTTTGGCTACTTTGA MMLFRFYRTVKELDGEKAKPPKVRLLAGFKVKRAKEHFHGQRWSYLLYFLPFGVILILGLWYIFSLCDGSSVREVEIPNTCKEKTWNFLKHFNVSESQFHALDSFFFHSDQTASLLCAKDSEPGNALKDCIPCALKILEREQDSQKKHGWLSEDLQPEGQCPTRGEMDSFNIDLLQLVDKTQPLTSKSSFSFVSPCLQIHRERILHTREIGTEHSRSLNGLVMACLWVLAVVISCLKMSSFHLKLRNHKHKPIKHPSVENQPVIQLQQVLLQQKQLDLSPSPPKGAGKWRKKLLIIFVLLGITGSFWLFWYLNNKIILRREETLSNMCDERARMLQDQFNVSMNHVHALAILVSTFHHGKHPSAIDQASDYLSLLLFVQLHFWLL Homology
BLAST of HG10005486 vs. NCBI nr
Match: XP_038887968.1 (histidine kinase 2-like [Benincasa hispida] >XP_038887970.1 histidine kinase 2-like [Benincasa hispida] >XP_038887971.1 histidine kinase 2-like [Benincasa hispida]) HSP 1 Score: 627.5 bits (1617), Expect = 7.7e-176 Identity = 308/346 (89.02%), Postives = 320/346 (92.49%), Query Frame = 0
BLAST of HG10005486 vs. NCBI nr
Match: KAG7022815.1 (Histidine kinase 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 606.7 bits (1563), Expect = 1.4e-169 Identity = 293/345 (84.93%), Postives = 316/345 (91.59%), Query Frame = 0
BLAST of HG10005486 vs. NCBI nr
Match: KAG6589107.1 (Histidine kinase 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 605.1 bits (1559), Expect = 4.1e-169 Identity = 292/345 (84.64%), Postives = 316/345 (91.59%), Query Frame = 0
BLAST of HG10005486 vs. NCBI nr
Match: XP_023529579.1 (histidine kinase 2-like [Cucurbita pepo subsp. pepo] >XP_023529580.1 histidine kinase 2-like [Cucurbita pepo subsp. pepo] >XP_023529581.1 histidine kinase 2-like [Cucurbita pepo subsp. pepo] >XP_023529582.1 histidine kinase 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 605.1 bits (1559), Expect = 4.1e-169 Identity = 293/345 (84.93%), Postives = 315/345 (91.30%), Query Frame = 0
BLAST of HG10005486 vs. NCBI nr
Match: XP_022928257.1 (histidine kinase 2 isoform X1 [Cucurbita moschata] >XP_022928258.1 histidine kinase 2 isoform X1 [Cucurbita moschata]) HSP 1 Score: 603.6 bits (1555), Expect = 1.2e-168 Identity = 292/345 (84.64%), Postives = 315/345 (91.30%), Query Frame = 0
BLAST of HG10005486 vs. ExPASy Swiss-Prot
Match: Q9C5U2 (Histidine kinase 2 OS=Arabidopsis thaliana OX=3702 GN=AHK2 PE=1 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 8.4e-40 Identity = 108/293 (36.86%), Postives = 151/293 (51.54%), Query Frame = 0
BLAST of HG10005486 vs. ExPASy Swiss-Prot
Match: A1A697 (Probable histidine kinase 5 OS=Oryza sativa subsp. japonica OX=39947 GN=HK5 PE=2 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 3.1e-26 Identity = 61/98 (62.24%), Postives = 76/98 (77.55%), Query Frame = 0
BLAST of HG10005486 vs. ExPASy Swiss-Prot
Match: Q9C5U1 (Histidine kinase 3 OS=Arabidopsis thaliana OX=3702 GN=AHK3 PE=1 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 6.4e-24 Identity = 49/79 (62.03%), Postives = 67/79 (84.81%), Query Frame = 0
BLAST of HG10005486 vs. ExPASy Swiss-Prot
Match: A2WYI4 (Probable histidine kinase 3 OS=Oryza sativa subsp. indica OX=39946 GN=HK3 PE=2 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 6.6e-21 Identity = 48/75 (64.00%), Postives = 64/75 (85.33%), Query Frame = 0
BLAST of HG10005486 vs. ExPASy Swiss-Prot
Match: A1A696 (Probable histidine kinase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=HK3 PE=2 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 6.6e-21 Identity = 48/75 (64.00%), Postives = 64/75 (85.33%), Query Frame = 0
BLAST of HG10005486 vs. ExPASy TrEMBL
Match: A0A6J1EJE1 (Histidine kinase OS=Cucurbita moschata OX=3662 GN=LOC111435146 PE=4 SV=1) HSP 1 Score: 603.6 bits (1555), Expect = 5.8e-169 Identity = 292/345 (84.64%), Postives = 315/345 (91.30%), Query Frame = 0
BLAST of HG10005486 vs. ExPASy TrEMBL
Match: A0A6J1ER81 (Histidine kinase OS=Cucurbita moschata OX=3662 GN=LOC111435146 PE=4 SV=1) HSP 1 Score: 598.2 bits (1541), Expect = 2.4e-167 Identity = 292/345 (84.64%), Postives = 314/345 (91.01%), Query Frame = 0
BLAST of HG10005486 vs. ExPASy TrEMBL
Match: A0A6J1JPU8 (Histidine kinase OS=Cucurbita maxima OX=3661 GN=LOC111486406 PE=4 SV=1) HSP 1 Score: 594.7 bits (1532), Expect = 2.7e-166 Identity = 291/345 (84.35%), Postives = 314/345 (91.01%), Query Frame = 0
BLAST of HG10005486 vs. ExPASy TrEMBL
Match: A0A6J1JNY0 (Histidine kinase OS=Cucurbita maxima OX=3661 GN=LOC111486406 PE=4 SV=1) HSP 1 Score: 589.3 bits (1518), Expect = 1.1e-164 Identity = 291/345 (84.35%), Postives = 313/345 (90.72%), Query Frame = 0
BLAST of HG10005486 vs. ExPASy TrEMBL
Match: A0A6J1C2P9 (Histidine kinase OS=Momordica charantia OX=3673 GN=LOC111007822 PE=4 SV=1) HSP 1 Score: 579.3 bits (1492), Expect = 1.2e-161 Identity = 286/346 (82.66%), Postives = 305/346 (88.15%), Query Frame = 0
BLAST of HG10005486 vs. TAIR 10
Match: AT5G35750.1 (histidine kinase 2 ) HSP 1 Score: 166.0 bits (419), Expect = 5.9e-41 Identity = 108/293 (36.86%), Postives = 151/293 (51.54%), Query Frame = 0
BLAST of HG10005486 vs. TAIR 10
Match: AT1G27320.1 (histidine kinase 3 ) HSP 1 Score: 113.2 bits (282), Expect = 4.6e-25 Identity = 49/79 (62.03%), Postives = 67/79 (84.81%), Query Frame = 0
BLAST of HG10005486 vs. TAIR 10
Match: AT2G01830.2 (CHASE domain containing histidine kinase protein ) HSP 1 Score: 89.7 bits (221), Expect = 5.4e-18 Identity = 44/77 (57.14%), Postives = 62/77 (80.52%), Query Frame = 0
BLAST of HG10005486 vs. TAIR 10
Match: AT2G01830.3 (CHASE domain containing histidine kinase protein ) HSP 1 Score: 89.7 bits (221), Expect = 5.4e-18 Identity = 44/77 (57.14%), Postives = 62/77 (80.52%), Query Frame = 0
BLAST of HG10005486 vs. TAIR 10
Match: AT2G01830.1 (CHASE domain containing histidine kinase protein ) HSP 1 Score: 89.7 bits (221), Expect = 5.4e-18 Identity = 44/77 (57.14%), Postives = 62/77 (80.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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