
HG10005268 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTATAACTGGTACAAGGTACGTTTTTGAACCATTTTTTAACTTTATTTTAAGGTAATTACTAAAATTCATGGCATCAAGATACTGTTCGTGTGCGGTTGCCGGTTGCTTCACTTTGTCAGTTTGTCTAAGGGAAGACTGACCTTATGTGTGAAAAGAGAACAATCTAAGTAATCAGTCATATCAAATAACATCGACTGACATGGACTGTAAGATGTAGAAGCTGCAGAGGTAGATGCGGATTCTTGTATAAATTATTTCTTTTCATCCTCTCCAGAAGAATTAAAATTCACACTGAATGAGAATGAGATCTTTTTAGTTTCCTGGGATTTGGGATTTGAATTATCTCTCGTGTTTTGACCACCAAACACTGTAGGGCTTAGTTGATACCCATTAAGATATTATAGTATACCTATATGTTGTCATTTCTCTGTTTGTTTTTTAAACTGCCTCCTTGTATATCTCCTATATAATAATTTTTTTGTGTTAATCCGAACTGTCTTCCATTTGCCTATGAAAGCTGATCTGAAATTGATTTGAAACGGAAAGTTGCAGCTATTAAAGGTGAGAGCCTATTAGAGCATTTGAAGAAAAAAATCAGAATACCAGAGTAAAGAAGAAATGGGTTAGAGGGAGAATGTACAAAGGGATCTATAACATGTAAAGCCTCATGAGTGCATATCCGATCGCTTAACAATTAAAAACCATGTGAAATGTTTAGTTTTTTCTTGATGGAATTTTTCTTAATACGTCTAGAGAAAAGGATGAGGATGGTTGACTTGTATGCTTTGGATTAGAGTTCATTATTTCACTTTTCTATGAGTTTTCAAGGCTCATCATTTTAAGTGGTGCCCCTTTACTTTTTATTCAAAAGATTTAGAGAGTTTTTTCCTTTTTCCTTTTTTTCCTTTTTTTTTTTTTTAATAGTGAGTAGAACTGATAAAAAAATGCTTTTAGTGCTTGTGATCTCGTTCTGTAGCCTTCTTTCGTATAAAGGCTAAAAAAAAGCATGGATAATGAATTCTGGCTTGTCTTGTATTTTCATGGATTTAGATATTTTATTGATCATGCAGTGAAAAGGTTGCTCATCAGGCCCTCAAGGCTAGCGATTGGCATCTTGAAGGAGCTTTTGATGTATTTTACAGTCAACCCCAAATTAAAGCATTCACCGACTCTAGACATTTGGAAGAGCTTTATAACAGATATAAAGGCAAGCTTTATATTCATTCTATCATTACTTCTCTTTGTGTACACTTGTAAAGCGTAGTGAAACCATGGTGACAGAGTTTATGATTTTCTATGAGCATGAAAGTAACAAAGGTTTTTTTTTTTTTTTTTTTTAATAATCTAAAATGGGCAGATCCATATGTTGATATGATATTGGCTGATGGTATCTCACTGCTCTGCGATGACCTTCAGGTGTAGTTGATTTATGTGTCCAACTATTTTTGATGTGTTTGATGAGTTGATGGCTATAAAGTTTACTACTTAATTTTAACCATGCAGTTCTATTTTCTATGTCTACCTATTGAATTGACGTGAATTACATTTCTCTGCAGGTGGATCCTCAAGATATTGTTATGGTATGCTTTTCAAAAATAATTTTTGCTACACAAGGCATTCATATGTAAATTAAATGGATACTTTATGCTATCTTTCTCATCCTAGAGTTATCTAGAGTCCATGCATGCACTCCTTTTAGTGGGGGCTAAATTAGACCGTTATCCTGAAAAGATTACTCTTGTCATGCTTCATCTTGGAGAAGATATTTGAGATGGGATAGCAATATTCGCATTCTCCCTCTTATAATTCAGTAGCTTAGTAGAGGCATTGACATAAATAACTTCAAGTACAAGGTCCCTTTAAGTGCTTCCTTCACCCTTGTTAAAAGAAGCTGATTATTTCAGTTTCACATTATCATTAACAGTAACACTGAATCTGGTAGGACAATCATGGGATTATCTATTTGAAAGGTCTGGAAGTAGTTGATATTTTCACCCAATTTCAAGAATCTCAGTTTAAATACTGATTTTGTGCATGTCTTCTGATTAATAACTTTTTGTTTTGTTTTTGTATTTTTTTAATATACTACTATTACCTGCAGTTGGTTGTTTCTTGGCATATGAAGGCAAACACAATGTGTGAGTTTTCCAAACAGGAGTTTATAGGTGGATTACAAGCACTAGGGTAACTAATTGTTTGCAGTTATATATTCTTTCAGACAAGAATAACATGCATGGGATCAAAATAATTCTTGTCATAATTTTAATGTTCAGTTTATGATGGCAGGATAGATTCTCTGGAGAGGTTTCGAGAAAGGATACCATATATGCGCTCTGAGTTGAAAGATGATCGTATGTATTCTTTTGTTGCCTATATCATGTTGTAACTTATATTACCCCTTGCTTATAATTGGAAACAAGAATGCTGTGTGATATTGTCTCGCTGATTTGTTATGTTGATTTCATGTCTCTCCAGAAAAGTTCCGTGAGATTTACAACTTCGCATTTGGTTGGGCAAAAGAAAAGGTACTTCTTCTTGGCTTGAATATTCCCTAGAGGATCTATTTACAGCTGTTCTCTATCTCCAGTTGCATGTGTGTTAGATACCAGCATAATGTCAGCCTAAGGCATGGACTTCTAAAGTGGGTATATGTGTTTTAGGGGCAAAAATCTTTAGCATTGGACACTGCAATTGGAATGTGGCAGTTACTATTTGCTGAAAAGCAGTGGCTCCTGGTCGACCACTGGTGTCAGTTCTTGCAGGTAATGTTCCTAATCTGTCTGTTTGAAAATGACCGAACTTCTGTAATGTGTGGGGCAAAGCTCCTGTTGTTGGGGTATGATGTCTGTAACGAAGATTTTTTTTTATATGACACTAGTATTGGACTCGAGGAGCTTATTTATCTTGTGGATGCAAAGGACAGAACACTCTAGATATTTTATCCAGTAACGATCCATCTTGAACATTTTTGTAGAATGTGTTACAGGAAGGATCTTTCCTGCACAAAATTTAGCCAGTAGTTTTCTTGTTTGCTTTCTGCTGAGGAATGTGGGGAAATTACACTTTATTGCCGTAGAGATGGAAGGTCTACACTCTTCCACTCAACCAAGAAAAAGACTTTAGAACTAGAATTATCTGTTACAATGTCCTAGTTCAAGTTGCTTGTTCTGTTTTTCTAATGATACATTCTTAATAATTTATTTGATCTATTTATATTTTAATCCTTCTTGATTCAGGCTCGGCATAATAAAGCTATTTCCAGGGACACATGGTCTCAACTTCTTGAGTTTGCAAGGGTAAGAATGATAATTTAAACAAAAGGTTTAAATGCCTCAAAGTTATTGTCTTTTTATAAAATAATTTAGTTTATGGACTTCCAAAATTAATTCCTGAAAAGTAATAAAAACAATCCTCCTTTAAATCTCTATTTTTGCCCGGGGGATGATGGGAAGCACCACTGGCAATTTGTCGGTGTCTTGGATGCTTGTTATTGATGTCATGCATCATTTATTGTGCTAATTCCTTTCTTACTCGTCTCGATTTGTAGACTGTGGAGCCTACACTATCAAATTACGATGCGGAAGGTGCTTGGCCATACCTGATCGATGAATTTGTTGAATACCTGAACGAGAATGGCATAATCCAGAATAGTCAGCCGAATGATTTGAGTCAGATAAGGTGA ATGGCTATAACTGGTACAAGTGAAAAGGTTGCTCATCAGGCCCTCAAGGCTAGCGATTGGCATCTTGAAGGAGCTTTTGATGTATTTTACAGTCAACCCCAAATTAAAGCATTCACCGACTCTAGACATTTGGAAGAGCTTTATAACAGATATAAAGGCAAGCTTTATATTCATTCTATCATTACTTCTCTTTATCCATATGTTGATATGATATTGGCTGATGGTATCTCACTGCTCTGCGATGACCTTCAGGTGGATCCTCAAGATATTGTTATGTTGGTTGTTTCTTGGCATATGAAGGCAAACACAATGTGTGAGTTTTCCAAACAGGAGTTTATAGGTGGATTACAAGCACTAGGGATAGATTCTCTGGAGAGGTTTCGAGAAAGGATACCATATATGCGCTCTGAGTTGAAAGATGATCAAAAGTTCCGTGAGATTTACAACTTCGCATTTGGTTGGGCAAAAGAAAAGGGGCAAAAATCTTTAGCATTGGACACTGCAATTGGAATGTGGCAGTTACTATTTGCTGAAAAGCAGTGGCTCCTGGTCGACCACTGGTGTCAGTTCTTGCAGGCTCGGCATAATAAAGCTATTTCCAGGGACACATGGTCTCAACTTCTTGAGTTTGCAAGGACTGTGGAGCCTACACTATCAAATTACGATGCGGAAGGTGCTTGGCCATACCTGATCGATGAATTTGTTGAATACCTGAACGAGAATGGCATAATCCAGAATAGTCAGCCGAATGATTTGAGTCAGATAAGGTGA ATGGCTATAACTGGTACAAGTGAAAAGGTTGCTCATCAGGCCCTCAAGGCTAGCGATTGGCATCTTGAAGGAGCTTTTGATGTATTTTACAGTCAACCCCAAATTAAAGCATTCACCGACTCTAGACATTTGGAAGAGCTTTATAACAGATATAAAGGCAAGCTTTATATTCATTCTATCATTACTTCTCTTTATCCATATGTTGATATGATATTGGCTGATGGTATCTCACTGCTCTGCGATGACCTTCAGGTGGATCCTCAAGATATTGTTATGTTGGTTGTTTCTTGGCATATGAAGGCAAACACAATGTGTGAGTTTTCCAAACAGGAGTTTATAGGTGGATTACAAGCACTAGGGATAGATTCTCTGGAGAGGTTTCGAGAAAGGATACCATATATGCGCTCTGAGTTGAAAGATGATCAAAAGTTCCGTGAGATTTACAACTTCGCATTTGGTTGGGCAAAAGAAAAGGGGCAAAAATCTTTAGCATTGGACACTGCAATTGGAATGTGGCAGTTACTATTTGCTGAAAAGCAGTGGCTCCTGGTCGACCACTGGTGTCAGTTCTTGCAGGCTCGGCATAATAAAGCTATTTCCAGGGACACATGGTCTCAACTTCTTGAGTTTGCAAGGACTGTGGAGCCTACACTATCAAATTACGATGCGGAAGGTGCTTGGCCATACCTGATCGATGAATTTGTTGAATACCTGAACGAGAATGGCATAATCCAGAATAGTCAGCCGAATGATTTGAGTCAGATAAGGTGA MAITGTSEKVAHQALKASDWHLEGAFDVFYSQPQIKAFTDSRHLEELYNRYKGKLYIHSIITSLYPYVDMILADGISLLCDDLQVDPQDIVMLVVSWHMKANTMCEFSKQEFIGGLQALGIDSLERFRERIPYMRSELKDDQKFREIYNFAFGWAKEKGQKSLALDTAIGMWQLLFAEKQWLLVDHWCQFLQARHNKAISRDTWSQLLEFARTVEPTLSNYDAEGAWPYLIDEFVEYLNENGIIQNSQPNDLSQIR Homology
BLAST of HG10005268 vs. NCBI nr
Match: XP_038888706.1 (DCN1-like protein 2 isoform X1 [Benincasa hispida]) HSP 1 Score: 488.4 bits (1256), Expect = 3.7e-134 Identity = 240/256 (93.75%), Postives = 242/256 (94.53%), Query Frame = 0
BLAST of HG10005268 vs. NCBI nr
Match: XP_011659046.1 (DCN1-like protein 2 [Cucumis sativus]) HSP 1 Score: 484.6 bits (1246), Expect = 5.4e-133 Identity = 239/256 (93.36%), Postives = 240/256 (93.75%), Query Frame = 0
BLAST of HG10005268 vs. NCBI nr
Match: XP_022969367.1 (DCN1-like protein 2 [Cucurbita maxima]) HSP 1 Score: 480.7 bits (1236), Expect = 7.8e-132 Identity = 235/256 (91.80%), Postives = 240/256 (93.75%), Query Frame = 0
BLAST of HG10005268 vs. NCBI nr
Match: XP_022952945.1 (DCN1-like protein 2 [Cucurbita moschata]) HSP 1 Score: 480.3 bits (1235), Expect = 1.0e-131 Identity = 235/256 (91.80%), Postives = 239/256 (93.36%), Query Frame = 0
BLAST of HG10005268 vs. NCBI nr
Match: XP_008447085.1 (PREDICTED: DCN1-like protein 2 isoform X2 [Cucumis melo]) HSP 1 Score: 479.9 bits (1234), Expect = 1.3e-131 Identity = 239/257 (93.00%), Postives = 240/257 (93.39%), Query Frame = 0
BLAST of HG10005268 vs. ExPASy Swiss-Prot
Match: Q8BZJ7 (DCN1-like protein 2 OS=Mus musculus OX=10090 GN=Dcun1d2 PE=1 SV=3) HSP 1 Score: 200.7 bits (509), Expect = 2.0e-50 Identity = 102/243 (41.98%), Postives = 143/243 (58.85%), Query Frame = 0
BLAST of HG10005268 vs. ExPASy Swiss-Prot
Match: Q96GG9 (DCN1-like protein 1 OS=Homo sapiens OX=9606 GN=DCUN1D1 PE=1 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 3.5e-50 Identity = 101/243 (41.56%), Postives = 143/243 (58.85%), Query Frame = 0
BLAST of HG10005268 vs. ExPASy Swiss-Prot
Match: Q5ZKU1 (DCN1-like protein 1 OS=Gallus gallus OX=9031 GN=DCUN1D1 PE=2 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 1.0e-49 Identity = 100/243 (41.15%), Postives = 142/243 (58.44%), Query Frame = 0
BLAST of HG10005268 vs. ExPASy Swiss-Prot
Match: Q9QZ73 (DCN1-like protein 1 OS=Mus musculus OX=10090 GN=Dcun1d1 PE=2 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 1.7e-49 Identity = 100/243 (41.15%), Postives = 142/243 (58.44%), Query Frame = 0
BLAST of HG10005268 vs. ExPASy Swiss-Prot
Match: Q6PH85 (DCN1-like protein 2 OS=Homo sapiens OX=9606 GN=DCUN1D2 PE=1 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 3.2e-48 Identity = 97/243 (39.92%), Postives = 138/243 (56.79%), Query Frame = 0
BLAST of HG10005268 vs. ExPASy TrEMBL
Match: A0A6J1HW59 (Defective in cullin neddylation protein OS=Cucurbita maxima OX=3661 GN=LOC111468394 PE=4 SV=1) HSP 1 Score: 480.7 bits (1236), Expect = 3.8e-132 Identity = 235/256 (91.80%), Postives = 240/256 (93.75%), Query Frame = 0
BLAST of HG10005268 vs. ExPASy TrEMBL
Match: A0A6J1GN94 (Defective in cullin neddylation protein OS=Cucurbita moschata OX=3662 GN=LOC111455467 PE=4 SV=1) HSP 1 Score: 480.3 bits (1235), Expect = 4.9e-132 Identity = 235/256 (91.80%), Postives = 239/256 (93.36%), Query Frame = 0
BLAST of HG10005268 vs. ExPASy TrEMBL
Match: A0A1S3BGK1 (Defective in cullin neddylation protein OS=Cucumis melo OX=3656 GN=LOC103489629 PE=4 SV=1) HSP 1 Score: 479.9 bits (1234), Expect = 6.4e-132 Identity = 239/257 (93.00%), Postives = 240/257 (93.39%), Query Frame = 0
BLAST of HG10005268 vs. ExPASy TrEMBL
Match: A0A1S3BGK9 (Defective in cullin neddylation protein OS=Cucumis melo OX=3656 GN=LOC103489629 PE=4 SV=1) HSP 1 Score: 474.6 bits (1220), Expect = 2.7e-130 Identity = 239/260 (91.92%), Postives = 240/260 (92.31%), Query Frame = 0
BLAST of HG10005268 vs. ExPASy TrEMBL
Match: A0A5D3BCA0 (Defective in cullin neddylation protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G00510 PE=4 SV=1) HSP 1 Score: 468.0 bits (1203), Expect = 2.5e-128 Identity = 233/253 (92.09%), Postives = 234/253 (92.49%), Query Frame = 0
BLAST of HG10005268 vs. TAIR 10
Match: AT3G12760.1 (CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast hits to 855 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). ) HSP 1 Score: 367.5 bits (942), Expect = 8.9e-102 Identity = 176/246 (71.54%), Postives = 205/246 (83.33%), Query Frame = 0
BLAST of HG10005268 vs. TAIR 10
Match: AT1G15860.1 (Domain of unknown function (DUF298) ) HSP 1 Score: 104.8 bits (260), Expect = 1.1e-22 Identity = 59/217 (27.19%), Postives = 115/217 (53.00%), Query Frame = 0
BLAST of HG10005268 vs. TAIR 10
Match: AT1G15860.2 (Domain of unknown function (DUF298) ) HSP 1 Score: 104.8 bits (260), Expect = 1.1e-22 Identity = 59/217 (27.19%), Postives = 115/217 (53.00%), Query Frame = 0
BLAST of HG10005268 vs. TAIR 10
Match: AT1G15860.3 (Domain of unknown function (DUF298) ) HSP 1 Score: 99.4 bits (246), Expect = 4.5e-21 Identity = 59/226 (26.11%), Postives = 112/226 (49.56%), Query Frame = 0
BLAST of HG10005268 vs. TAIR 10
Match: AT3G28970.1 (Domain of unknown function (DUF298) ) HSP 1 Score: 94.0 bits (232), Expect = 1.9e-19 Identity = 46/117 (39.32%), Postives = 68/117 (58.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|