HG10005259 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005259
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein PXR1 isoform X1
Location	Chr07: 966014 .. 968637 (+)
RNA-Seq Expression	HG10005259
Synteny	HG10005259

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGGAAGCGAAAGAAAATCCAAGGAGAAGAGGAAGCATAGAAAAGCGGCTTCATCTTCTGAAGGTACCCATTCCTGTTCTCCTTTTTTGTATGCATTTCCCCTCCTTTAATCTGTTTTTACTCAACTATTTTCAAGGAGTTCTCCCAAATAGAAGCATTACTCCTAGAGAACTTTACATTTCTGCTTTTCTTGGAGTGTATTCTCCAGTAATCTATGGTGGATTGCGCTGTATGTTGTGTTAATGCTATTGCTTGTAAAAGTTCAGAGGAGAAGAGGAGCAAGAGACCAAGAGCTGCAGAAAATGAGGAAAGGGAAAGCAGGAGTGATAAGAGAGAGAAGCGGAAGGAGAAGAAATCTCACAAGCACTCTAAACGCCACTCAGGTAAACTCGAACGGGCAATTTGCAGAAATATGCATGTTACGGTTCTTGTTTGGTATTATTATGTTTTATCTCATAGGTGGTCGTTTTCTTCTTCGTTGGTTATTTTATTTTATTTGAATTTGAATTAGAATTAATGGTATTGTACAAATTGCTTCAATTCAAAATTTAGGTTTTCTGGTATTAAACTGGTGTCGATACTATGGCTAAGTTAATTGAAATCAAAACCCTTCTATTTTTATATATTCTTTAAATTTATTCTCTCTGCTACTTTTTCTGTCTTTTTCTCCAAATTCATGTTTGGAAGGAACTTGTGGTTTCAAGAAAGAATATTATCCTGTAAGTATTTGAATACATGAGTTTTTACTTTTCCAGTTTTTCTACAGCAGCCTCATTGCAGATGCAGATGTAAAGTTCTAGTTGTTTTACTTATGAATGGGATTGTGAAGAAGTACTTTATAAATAGTTTTCCAAAGTAAAGATTTGTCATGCCCTGCCTTTTTCTCTCAGAGAAGAAGTCAAAGGATATTCACAAAGGCAAGCATCACAAGGGCGATCACCTTTCAGTGAGTTCTTCTGTAGTGATAAAGCACGTGCATTAGTTTATGTTTTAATTATTCTACTTTTACATTCATATGCTGGATTGTGCTATTGAGCATCCCTGCACTTTTCCTGTTTATTATTCTTAGATGGGATTGGAAAGTACAGAAGTAGGAAATGGATTACAATGCTCTATATAGGAAATTTCGATTTATCATGTTTGTGTTATTGTTGTTTTTTCCCCCCTACTTCACTGCCTCTTAATTATTAACAATATATCTTGAGGTATTCAAATCTAGTAAATTTAGTATTAGATTATCCTATTTGGAGATTATCTTAAGTGGCCTCGAGATATGGTTAACTCAAATATAGCGAAGATAGTTAAAATGTCTGGAAAATATTGGATTGTTTTTCACTCTTCACTTTTTTAATTCATGAATCTGTGCAGCTGAACTCAATTTATGGGATCACTGGATGTGAGAGAGATTACGCAAGAATATAGTGGAGGAGATTTGTTATAGATTAATCTATGGAAGACACCAGGTAACTATTGGTTACTGGTGTCTAAGGATTTGGTTCAGGTATTTAGAGGGCTAGAAATTACTAATATAAGTTGCACAAGGGGAAGGTGCTTGCAAATTTGCAACCTAAATTCAGCTTCTCATAACTTGGGATTTTCTATTCTTTATTATATTTCTTTTGCTTTTTCACGTGAAAGAACCATTTTTAATATCAAATTGTTTGGTGCTATGCCACGGCATTAGGCTACTTGAATGTAGAAGTTAATGTTAATTTAGTTGCAATGAGGTTGCCCTATCACCTGTTCTGAAGTATTTTAACTATGCACTCCATTCCTTTATCTTATACATAAAACAGAAGTACAATTATGATACATGGTCCTAGAAAAAGTGAATTATTTAGCAGTGAGGTGGTTACTCTGAAGAATTAAATCAACCAAATCCTTTTCAAAGTGAATTATGGTGTCTTGATTGGACCAATAGGAGAAAGATCTTGGTTTTATCCATATTTGTTAGTTATTTGTCGCTTCTACCAAACTTCCTGCTTCTACAAATTTCTTTCCTGCCTCATCAGATTGTTGTGAACCTTGTGATATACTACATAATTCAGCCAGCTAATTACTGGCATGAGGCTTTATTGGGAATTTAAAAAAATTTCTAGGACTAGCAATCATTGCTGAAATTCAACTTTGCATCATTGTTTCCCACTTAAGCCTTGATTTGTTAGCTACTTCTACAGAACTCCTTCCAATATTCGTTCATCGTAGTATGAGAGGAAGATTTGATGCGACTGTATTTTTCTATTGCTTTTTCAGCAATTAAATGTAATGCCCTAGTTTATTTTAGTTTTTTCATTTTGGAATTAGAGAGTATATACTATGTCCTATTTCTTGTTATGGGGCTGTGACCCTCTGGATCTCTGGGCTTAATACTACTTTTGTTGATTAGAGTGCCAAAATTCAAGAACTGTCCAAGGAAGACTATTTCTCAAAGAATAATGAGTTTGCTACCTGGTTGAAAGATGAGAAGAATGTGTACTTTTCTGATCTCTCGTCGGAGTCTGCTCGCGAACTTTTTTCAGATTTCATTGAACTGTGGAATGATCGAAAGCTTGAATCTCGATATTATGAGGGTATTTCAAGTGGGCCTCGGACATCCCATAACTGGAAAATCAAGGGGTGA

mRNA sequence

ATGGCCGGAAGCGAAAGAAAATCCAAGGAGAAGAGGAAGCATAGAAAAGCGGCTTCATCTTCTGAAGAGGAGAAGAGGAGCAAGAGACCAAGAGCTGCAGAAAATGAGGAAAGGGAAAGCAGGAGTGATAAGAGAGAGAAGCGGAAGGAGAAGAAATCTCACAAGCACTCTAAACGCCACTCAGAGAAGAAGTCAAAGGATATTCACAAAGGCAAGCATCACAAGGGCGATCACCTTTCAAGTGCCAAAATTCAAGAACTGTCCAAGGAAGACTATTTCTCAAAGAATAATGAGTTTGCTACCTGGTTGAAAGATGAGAAGAATGTGTACTTTTCTGATCTCTCGTCGGAGTCTGCTCGCGAACTTTTTTCAGATTTCATTGAACTGTGGAATGATCGAAAGCTTGAATCTCGATATTATGAGGGTATTTCAAGTGGGCCTCGGACATCCCATAACTGGAAAATCAAGGGGTGA

Coding sequence (CDS)

ATGGCCGGAAGCGAAAGAAAATCCAAGGAGAAGAGGAAGCATAGAAAAGCGGCTTCATCTTCTGAAGAGGAGAAGAGGAGCAAGAGACCAAGAGCTGCAGAAAATGAGGAAAGGGAAAGCAGGAGTGATAAGAGAGAGAAGCGGAAGGAGAAGAAATCTCACAAGCACTCTAAACGCCACTCAGAGAAGAAGTCAAAGGATATTCACAAAGGCAAGCATCACAAGGGCGATCACCTTTCAAGTGCCAAAATTCAAGAACTGTCCAAGGAAGACTATTTCTCAAAGAATAATGAGTTTGCTACCTGGTTGAAAGATGAGAAGAATGTGTACTTTTCTGATCTCTCGTCGGAGTCTGCTCGCGAACTTTTTTCAGATTTCATTGAACTGTGGAATGATCGAAAGCTTGAATCTCGATATTATGAGGGTATTTCAAGTGGGCCTCGGACATCCCATAACTGGAAAATCAAGGGGTGA

Protein sequence

MAGSERKSKEKRKHRKAASSSEEEKRSKRPRAAENEERESRSDKREKRKEKKSHKHSKRHSEKKSKDIHKGKHHKGDHLSSAKIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARELFSDFIELWNDRKLESRYYEGISSGPRTSHNWKIKG

Homology

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BLAST of HG10005259 vs. NCBI nr
Match: XP_004139834.1 (style cell-cycle inhibitor 1-A [Cucumis sativus] >KGN44283.1 hypothetical protein Csa_016106 [Cucumis sativus])

HSP 1 Score: 261.2 bits (666), Expect = 5.9e-66
Identity = 147/158 (93.04%), Postives = 154/158 (97.47%), Query Frame = 0


Query: 1   MAGSERKSKEKRKHRKAASSSEEEKRSKRPRAAENEERES-RSDKREKRKEKKSHKHSKR 60
           MAGSERKSKEKRKHRK+ SSS+++KRSKRPRAAE+EERES RSDKREKRKEKKSHKHSKR
Sbjct: 1   MAGSERKSKEKRKHRKSVSSSDDDKRSKRPRAAEDEERESRRSDKREKRKEKKSHKHSKR 60

Query: 61  HSEKKSKDIHKGKHHKGDHLSSAKIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESA 120
           HSEKKSKD+HKGKHHKGDHLS AKIQELSKEDYFSKNNEFATWLKD KNVYFSDLSSESA
Sbjct: 61  HSEKKSKDLHKGKHHKGDHLSRAKIQELSKEDYFSKNNEFATWLKDVKNVYFSDLSSESA 120

Query: 121 RELFSDFIELWNDRKLESRYYEGISSGPRTSHNWKIKG 158
           RELFSDF+ELWNDRKLESRYYEGISSGPRTSHNWKIKG
Sbjct: 121 RELFSDFVELWNDRKLESRYYEGISSGPRTSHNWKIKG 158

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BLAST of HG10005259 vs. NCBI nr
Match: XP_038888829.1 (style cell-cycle inhibitor 1-A isoform X1 [Benincasa hispida])

HSP 1 Score: 260.0 bits (663), Expect = 1.3e-65
Identity = 148/157 (94.27%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   MAGSERKSKEKRKHRKAASSSEEEKRSKRPRAAENEERES-RSDKREKRKEKKSHKHSKR 60
           M GSERKSKEKRKHRKAASSSE+EK SKRPRAAE+EERES RSDKREKRKEKKSHKHSKR
Sbjct: 1   MGGSERKSKEKRKHRKAASSSEDEKSSKRPRAAEDEERESRRSDKREKRKEKKSHKHSKR 60

Query: 61  HSEKKSKDIHKGKHHKGDHLSSAKIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESA 120
           HSEKKSKDIHKGKHHKGDHLS  KIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESA
Sbjct: 61  HSEKKSKDIHKGKHHKGDHLSRDKIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESA 120

Query: 121 RELFSDFIELWNDRKLESRYYEGISSGPRTSHNWKIK 157
           RELFSDF+ELWNDRKL+SRYYEGISSGPRTSHNWKIK
Sbjct: 121 RELFSDFVELWNDRKLKSRYYEGISSGPRTSHNWKIK 157

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BLAST of HG10005259 vs. NCBI nr
Match: XP_008447104.1 (PREDICTED: protein PXR1 isoform X2 [Cucumis melo])

HSP 1 Score: 259.6 bits (662), Expect = 1.7e-65
Identity = 147/158 (93.04%), Postives = 152/158 (96.20%), Query Frame = 0


Query: 1   MAGSERKSKEKRKHRKAASSSEEEKRSKRPRAAENEERES-RSDKREKRKEKKSHKHSKR 60
           M GSERKSKEKRKHRK+ASSSE+EKRSKRPRAAE+EERES RSDKREKRKEKKSHKHSK 
Sbjct: 1   MGGSERKSKEKRKHRKSASSSEDEKRSKRPRAAEDEERESRRSDKREKRKEKKSHKHSKS 60

Query: 61  HSEKKSKDIHKGKHHKGDHLSSAKIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESA 120
           HSEKKSKD+HKGKHHKGDHLS  KIQELSKEDYFSKNNEFATWLKD KNVYFSDLSSESA
Sbjct: 61  HSEKKSKDLHKGKHHKGDHLSRTKIQELSKEDYFSKNNEFATWLKDVKNVYFSDLSSESA 120

Query: 121 RELFSDFIELWNDRKLESRYYEGISSGPRTSHNWKIKG 158
           RELFSDF+ELWNDRKLESRYYEGISSGPRTSHNWKIKG
Sbjct: 121 RELFSDFVELWNDRKLESRYYEGISSGPRTSHNWKIKG 158

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BLAST of HG10005259 vs. NCBI nr
Match: XP_022147997.1 (protein PXR1 [Momordica charantia])

HSP 1 Score: 246.5 bits (628), Expect = 1.5e-61
Identity = 140/158 (88.61%), Postives = 150/158 (94.94%), Query Frame = 0


Query: 1   MAGSERKSKEKRKHRKAASSSEEEKRSKRPRAAENEERE-SRSDKREKRKEKKSHKHSKR 60
           M GSERKSKEKRK+RKAASSSE+EKRSKRPRAAE++ RE  RSDKREKRKEKKSHKHSK 
Sbjct: 1   MGGSERKSKEKRKNRKAASSSEDEKRSKRPRAAEDDGREIRRSDKREKRKEKKSHKHSKH 60

Query: 61  HSEKKSKDIHKGKHHKGDHLSSAKIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESA 120
           HSEKKSKDIHKGKHH+GDH S AK +ELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESA
Sbjct: 61  HSEKKSKDIHKGKHHRGDHHSRAKYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESA 120

Query: 121 RELFSDFIELWNDRKLESRYYEGISSGPRTSHNWKIKG 158
           R+LFSDF+ELWND+KLESRYYEGI+SGPRTSHNWKIKG
Sbjct: 121 RKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIKG 158

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BLAST of HG10005259 vs. NCBI nr
Match: XP_022969411.1 (luc7-like protein 3 isoform X1 [Cucurbita maxima])

HSP 1 Score: 238.0 bits (606), Expect = 5.4e-59
Identity = 138/158 (87.34%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 1   MAGSERKSKEKRKHRKAASSSEEEKRSKRPRAAENEERES-RSDKREKRKEKKSHKHSKR 60
           M GSERKSKEKRK+R+AASSSE+EKRSKRPRAAE+EERES R DKREKRKEKKSHKHSKR
Sbjct: 1   MGGSERKSKEKRKNRRAASSSEDEKRSKRPRAAEDEERESRRRDKREKRKEKKSHKHSKR 60

Query: 61  HSEKKSKDIHKGKHHKGDHLSSAKIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESA 120
            SEKKSKDI KGKHH+ DH   AKI+ELS+EDYF KNNEFATWLKDEKNVYFSDLSSESA
Sbjct: 61  DSEKKSKDILKGKHHRDDHPLRAKIEELSEEDYFLKNNEFATWLKDEKNVYFSDLSSESA 120

Query: 121 RELFSDFIELWNDRKLESRYYEGISSGPRTSHNWKIKG 158
           R+LFSDF+ELWNDR+LESRYYEGISSGPRTSHNWKIKG
Sbjct: 121 RKLFSDFVELWNDRRLESRYYEGISSGPRTSHNWKIKG 158

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BLAST of HG10005259 vs. ExPASy Swiss-Prot
Match: A0A1S4AX27 (Style cell-cycle inhibitor 1-A OS=Nicotiana tabacum OX=4097 GN=SCI1A PE=2 SV=2)

HSP 1 Score: 132.5 bits (332), Expect = 4.2e-30
Identity = 88/156 (56.41%), Postives = 118/156 (75.64%), Query Frame = 0


Query: 3   GSERKS-KEKRKHRKAASSSE-EEKRSKRPRAAENEERESRSDKREKRKEKKSHKHSKRH 62
           GS++K+ +EKRKH++++ SS  +E +SKR     +EER  R +K++K K++K   HS   
Sbjct: 2   GSDKKTPEEKRKHKRSSPSSPLDEVKSKRQNIKGDEER--RKEKKDKSKKEKHKSHSS-- 61

Query: 63  SEKKSKDIHKGKHHKGDHLSSAKIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESAR 122
            EKKS + HK K HK    S  K +ELSK+DYFSKNNEFATWLKD+KN++FSDLSSE+AR
Sbjct: 62  EEKKSGEKHKTKSHKHKDKSKNKFEELSKDDYFSKNNEFATWLKDKKNLFFSDLSSETAR 121

Query: 123 ELFSDFIELWNDRKLESRYYEGISSGPRTSHNWKIK 157
           +LFSDF+  WN  KL+S+YYEGI++GPR+SH W IK
Sbjct: 122 DLFSDFVIQWNKGKLDSQYYEGIATGPRSSHAWNIK 153

[Close]

BLAST of HG10005259 vs. ExPASy Swiss-Prot
Match: A0A1S3XQD6 (Style cell-cycle inhibitor 1-B OS=Nicotiana tabacum OX=4097 GN=SCI1B PE=2 SV=2)

HSP 1 Score: 132.5 bits (332), Expect = 4.2e-30
Identity = 91/159 (57.23%), Postives = 114/159 (71.70%), Query Frame = 0


Query: 1   MAGSERKSKEKRKH-RKAASSSEEEKRSKRPRAAENEERESRSDKREKRKEKKSHKHSKR 60
           M   ++ ++EKRKH R + SS  +E +SKR     +EER    DK +K K  KSHK SK 
Sbjct: 1   MGSDKKTTEEKRKHKRNSPSSPRDEVKSKRQNIKGDEERRKEKDKSKKEKH-KSHK-SKC 60

Query: 61  HS--EKKSKDIHKGKHHKGDHLSSAKIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSSE 120
           HS  EKKS + HK K HK    S  K +ELSK+DYFSKNNEFA+WLKD+KN++FSDLSSE
Sbjct: 61  HSSEEKKSGEKHKTKSHKHKDKSKNKFEELSKDDYFSKNNEFASWLKDKKNLFFSDLSSE 120

Query: 121 SARELFSDFIELWNDRKLESRYYEGISSGPRTSHNWKIK 157
           +AR LFSDF+  WN  KL+S+YYEGI++GPR+SH W IK
Sbjct: 121 TARNLFSDFVIQWNKGKLDSQYYEGIATGPRSSHAWNIK 157

[Close]

BLAST of HG10005259 vs. ExPASy Swiss-Prot
Match: Q8GWY0 (Style cell-cycle inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=SCI1 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.1e-29
Identity = 88/157 (56.05%), Postives = 112/157 (71.34%), Query Frame = 0


Query: 4   SERKSKEKRKHR---KAASSSEEEKRSKRPRAAENEERESRSDKREKRKEKKSHKHSKRH 63
           SER SKEK++ R   + +SSS+ E++ KR R  E +  + R  +R  +K+KKSHKH K  
Sbjct: 3   SERSSKEKKRSRARSEDSSSSDYEEKVKRHRGTEKD--DERRSRRSDKKDKKSHKHHKSS 62

Query: 64  SEKKSKDIH-KGKHHKGDHLSSAKIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESA 123
           + KKSKD   K KH + DH     I ELS EDYFSKNNEFATWLK+EK  YF+DL++E+A
Sbjct: 63  TSKKSKDDKPKKKHTESDHKLKEGIPELSMEDYFSKNNEFATWLKEEKRTYFNDLTTEAA 122

Query: 124 RELFSDFIELWNDRKLESRYYEGISSGPRTSHNWKIK 157
           R LFS F++ WN  KLESRYYEGIS+ PRT+H+W IK
Sbjct: 123 RGLFSRFVKRWNRGKLESRYYEGISTAPRTAHDWMIK 157

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BLAST of HG10005259 vs. ExPASy TrEMBL
Match: A0A0A0K434 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G238960 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.9e-66
Identity = 147/158 (93.04%), Postives = 154/158 (97.47%), Query Frame = 0


Query: 1   MAGSERKSKEKRKHRKAASSSEEEKRSKRPRAAENEERES-RSDKREKRKEKKSHKHSKR 60
           MAGSERKSKEKRKHRK+ SSS+++KRSKRPRAAE+EERES RSDKREKRKEKKSHKHSKR
Sbjct: 1   MAGSERKSKEKRKHRKSVSSSDDDKRSKRPRAAEDEERESRRSDKREKRKEKKSHKHSKR 60

Query: 61  HSEKKSKDIHKGKHHKGDHLSSAKIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESA 120
           HSEKKSKD+HKGKHHKGDHLS AKIQELSKEDYFSKNNEFATWLKD KNVYFSDLSSESA
Sbjct: 61  HSEKKSKDLHKGKHHKGDHLSRAKIQELSKEDYFSKNNEFATWLKDVKNVYFSDLSSESA 120

Query: 121 RELFSDFIELWNDRKLESRYYEGISSGPRTSHNWKIKG 158
           RELFSDF+ELWNDRKLESRYYEGISSGPRTSHNWKIKG
Sbjct: 121 RELFSDFVELWNDRKLESRYYEGISSGPRTSHNWKIKG 158

[Close]

BLAST of HG10005259 vs. ExPASy TrEMBL
Match: A0A1S3BGM9 (protein PXR1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489637 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 8.4e-66
Identity = 147/158 (93.04%), Postives = 152/158 (96.20%), Query Frame = 0


Query: 1   MAGSERKSKEKRKHRKAASSSEEEKRSKRPRAAENEERES-RSDKREKRKEKKSHKHSKR 60
           M GSERKSKEKRKHRK+ASSSE+EKRSKRPRAAE+EERES RSDKREKRKEKKSHKHSK 
Sbjct: 1   MGGSERKSKEKRKHRKSASSSEDEKRSKRPRAAEDEERESRRSDKREKRKEKKSHKHSKS 60

Query: 61  HSEKKSKDIHKGKHHKGDHLSSAKIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESA 120
           HSEKKSKD+HKGKHHKGDHLS  KIQELSKEDYFSKNNEFATWLKD KNVYFSDLSSESA
Sbjct: 61  HSEKKSKDLHKGKHHKGDHLSRTKIQELSKEDYFSKNNEFATWLKDVKNVYFSDLSSESA 120

Query: 121 RELFSDFIELWNDRKLESRYYEGISSGPRTSHNWKIKG 158
           RELFSDF+ELWNDRKLESRYYEGISSGPRTSHNWKIKG
Sbjct: 121 RELFSDFVELWNDRKLESRYYEGISSGPRTSHNWKIKG 158

[Close]

BLAST of HG10005259 vs. ExPASy TrEMBL
Match: A0A6J1D3V9 (protein PXR1 OS=Momordica charantia OX=3673 GN=LOC111016787 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 7.3e-62
Identity = 140/158 (88.61%), Postives = 150/158 (94.94%), Query Frame = 0


Query: 1   MAGSERKSKEKRKHRKAASSSEEEKRSKRPRAAENEERE-SRSDKREKRKEKKSHKHSKR 60
           M GSERKSKEKRK+RKAASSSE+EKRSKRPRAAE++ RE  RSDKREKRKEKKSHKHSK 
Sbjct: 1   MGGSERKSKEKRKNRKAASSSEDEKRSKRPRAAEDDGREIRRSDKREKRKEKKSHKHSKH 60

Query: 61  HSEKKSKDIHKGKHHKGDHLSSAKIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESA 120
           HSEKKSKDIHKGKHH+GDH S AK +ELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESA
Sbjct: 61  HSEKKSKDIHKGKHHRGDHHSRAKYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESA 120

Query: 121 RELFSDFIELWNDRKLESRYYEGISSGPRTSHNWKIKG 158
           R+LFSDF+ELWND+KLESRYYEGI+SGPRTSHNWKIKG
Sbjct: 121 RKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIKG 158

[Close]

BLAST of HG10005259 vs. ExPASy TrEMBL
Match: A0A6J1HXQ3 (luc7-like protein 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468427 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.6e-59
Identity = 138/158 (87.34%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 1   MAGSERKSKEKRKHRKAASSSEEEKRSKRPRAAENEERES-RSDKREKRKEKKSHKHSKR 60
           M GSERKSKEKRK+R+AASSSE+EKRSKRPRAAE+EERES R DKREKRKEKKSHKHSKR
Sbjct: 1   MGGSERKSKEKRKNRRAASSSEDEKRSKRPRAAEDEERESRRRDKREKRKEKKSHKHSKR 60

Query: 61  HSEKKSKDIHKGKHHKGDHLSSAKIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESA 120
            SEKKSKDI KGKHH+ DH   AKI+ELS+EDYF KNNEFATWLKDEKNVYFSDLSSESA
Sbjct: 61  DSEKKSKDILKGKHHRDDHPLRAKIEELSEEDYFLKNNEFATWLKDEKNVYFSDLSSESA 120

Query: 121 RELFSDFIELWNDRKLESRYYEGISSGPRTSHNWKIKG 158
           R+LFSDF+ELWNDR+LESRYYEGISSGPRTSHNWKIKG
Sbjct: 121 RKLFSDFVELWNDRRLESRYYEGISSGPRTSHNWKIKG 158

[Close]

BLAST of HG10005259 vs. ExPASy TrEMBL
Match: A0A6J1GK84 (protein PXR1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455071 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.7e-58
Identity = 137/158 (86.71%), Postives = 147/158 (93.04%), Query Frame = 0


Query: 1   MAGSERKSKEKRKHRKAASSSEEEKRSKRPRAAENEERES-RSDKREKRKEKKSHKHSKR 60
           M GSERKSKEKRK+ +AASSSE+EKRSKRPRAAE+EERES R DKREKRKEKKSHKHSKR
Sbjct: 1   MGGSERKSKEKRKNGRAASSSEDEKRSKRPRAAEDEERESRRRDKREKRKEKKSHKHSKR 60

Query: 61  HSEKKSKDIHKGKHHKGDHLSSAKIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESA 120
            SEKKSKDI KGKHH+ DH   AKI+ELS+EDYF KNNEFATWLKDEKNVYFSDLSSESA
Sbjct: 61  DSEKKSKDILKGKHHRDDHPLRAKIEELSEEDYFLKNNEFATWLKDEKNVYFSDLSSESA 120

Query: 121 RELFSDFIELWNDRKLESRYYEGISSGPRTSHNWKIKG 158
           R+LFSDF+ELWNDR+LESRYYEGISSGPRTSHNWKIKG
Sbjct: 121 RKLFSDFVELWNDRRLESRYYEGISSGPRTSHNWKIKG 158

[Close]

BLAST of HG10005259 vs. TAIR 10
Match: AT1G79200.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 130.2 bits (326), Expect = 1.5e-30
Identity = 88/157 (56.05%), Postives = 112/157 (71.34%), Query Frame = 0


Query: 4   SERKSKEKRKHR---KAASSSEEEKRSKRPRAAENEERESRSDKREKRKEKKSHKHSKRH 63
           SER SKEK++ R   + +SSS+ E++ KR R  E +  + R  +R  +K+KKSHKH K  
Sbjct: 3   SERSSKEKKRSRARSEDSSSSDYEEKVKRHRGTEKD--DERRSRRSDKKDKKSHKHHKSS 62

Query: 64  SEKKSKDIH-KGKHHKGDHLSSAKIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESA 123
           + KKSKD   K KH + DH     I ELS EDYFSKNNEFATWLK+EK  YF+DL++E+A
Sbjct: 63  TSKKSKDDKPKKKHTESDHKLKEGIPELSMEDYFSKNNEFATWLKEEKRTYFNDLTTEAA 122

Query: 124 RELFSDFIELWNDRKLESRYYEGISSGPRTSHNWKIK 157
           R LFS F++ WN  KLESRYYEGIS+ PRT+H+W IK
Sbjct: 123 RGLFSRFVKRWNRGKLESRYYEGISTAPRTAHDWMIK 157

The following BLAST results are available for this feature:

BLAST of HG10005259 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139834.1	5.9e-66	93.04	style cell-cycle inhibitor 1-A [Cucumis sativus] >KGN44283.1 hypothetical protei...	[more]
XP_038888829.1	1.3e-65	94.27	style cell-cycle inhibitor 1-A isoform X1 [Benincasa hispida]	[more]
XP_008447104.1	1.7e-65	93.04	PREDICTED: protein PXR1 isoform X2 [Cucumis melo]	[more]
XP_022147997.1	1.5e-61	88.61	protein PXR1 [Momordica charantia]	[more]
XP_022969411.1	5.4e-59	87.34	luc7-like protein 3 isoform X1 [Cucurbita maxima]	[more]

BLAST of HG10005259 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A1S4AX27	4.2e-30	56.41	Style cell-cycle inhibitor 1-A OS=Nicotiana tabacum OX=4097 GN=SCI1A PE=2 SV=2	[more]
A0A1S3XQD6	4.2e-30	57.23	Style cell-cycle inhibitor 1-B OS=Nicotiana tabacum OX=4097 GN=SCI1B PE=2 SV=2	[more]
Q8GWY0	2.1e-29	56.05	Style cell-cycle inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=SCI1 PE=2 SV=1	[more]

BLAST of HG10005259 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K434	2.9e-66	93.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G238960 PE=4 SV=1	[more]
A0A1S3BGM9	8.4e-66	93.04	protein PXR1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489637 PE=4 SV=1	[more]
A0A6J1D3V9	7.3e-62	88.61	protein PXR1 OS=Momordica charantia OX=3673 GN=LOC111016787 PE=4 SV=1	[more]
A0A6J1HXQ3	2.6e-59	87.34	luc7-like protein 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468427 PE=4 ...	[more]
A0A6J1GK84	1.7e-58	86.71	protein PXR1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455071 PE=4 SV=1	[more]

BLAST of HG10005259 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79200.1	1.5e-30	56.05	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..77
IPR044688	Style cell-cycle inhibitor 1-like	PANTHER	PTHR34117	STYLE CELL-CYCLE INHIBITOR 1	coord: 5..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005259.1	HG10005259.1	mRNA