HG10005244 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTCAATATAGCCACCAAGAAATTCCCAGTAAGTAGTTAAGAATGACAAAAACAAATTTCAATTATTACTTACACGCAATAGTTTTAATTTAAATTTGTTGTTGCAGTGGGCTATCCAGCGCCGCCACCGTCGTATCCGGCGGGAGAGCAAGATAAAGTGGGGAAATCAGGGCCTTATGTTGCAGCTCCGCCTCCGGTTGGATATCCGGTGAGAGACGGTCCACAGTACCCTCACCAAACTAATTTCACACCCCAAACTCAATCTAGAGGAGATGGCTTCTGGAAAGGATGGTTAGTTTCCTAAATATATATATATATATATATATATATATATATAAAAGATGGTATCTATTTGCATCTTATCCTATATTTTTAAAAGTGGTTGATACTTAACTTCATATGATACTTTAAGTATCTTGCATTTTGTTAATAGCTCATTTAAATATGTTTTTGGTGGATTGATATTTCAAAGCAACTAATCTAAAATGTGTATATTCTCAATCTAGAGATTCGATTAGAAATTTGGTCGACGTTTGAAATTTTCAACCTACATTTTTAAAACATTGCATTTGGTGAGTTATCGGGGATTAAACTTAATAAAGTCGATCGTGGGCATACATTTATTAAACACAAAATAAACTTTTTGAAATCATTTGGATTGACCAAAAGGATAACAAGATTGGTGAAGTCAAGTTTAATATTATATCATATAACATTGTAAGGTTTGAATGTAAAACCTTCCAAACCAATATACTTTGATACCATCACAAGCAAAAAAAAAAAAAAAAAAATGAGCTAGGATATAGTTCAAAATTTTCAACTTTCCTAAGATTTTAAATCATTAAAAGAAATAAACACATAAGCCATTAGGCACTAGATTTTAGATTAGTTGAATATTTAGATAGTTGTGATAGACGTTGATAAAGGTTTATCAGAGTCCATCAGTGGCAGAAATGATAGAAGTCTAAGTATTTTTTTTTTTTTTGCTATTTTCTATAAATAGTTTGACATTTTTTTATCCATAAAAATTTATCTTATCCTAACCGTAGTTGAATTTGATTTGTGTTTTGTAGCTGTGCTGCGTTGTGTTGCTGCTGGGTATTAGATTGTGTCTTCTGAAGATGCTGACTTAGCTACATTATTGGTTGCTGGTTTGGTTGAGATGAGACTTGTTTTTCAGTTTTAG ATGAGTCAATATAGCCACCAAGAAATTCCCATGGGCTATCCAGCGCCGCCACCGTCGTATCCGGCGGGAGAGCAAGATAAAGTGGGGAAATCAGGGCCTTATGTTGCAGCTCCGCCTCCGGTTGGATATCCGATTGTGTCTTCTGAAGATGCTGACTTAGCTACATTATTGGTTGCTGGTTTGGTTGAGATGAGACTTGTTTTTCAGTTTTAG ATGAGTCAATATAGCCACCAAGAAATTCCCATGGGCTATCCAGCGCCGCCACCGTCGTATCCGGCGGGAGAGCAAGATAAAGTGGGGAAATCAGGGCCTTATGTTGCAGCTCCGCCTCCGGTTGGATATCCGATTGTGTCTTCTGAAGATGCTGACTTAGCTACATTATTGGTTGCTGGTTTGGTTGAGATGAGACTTGTTTTTCAGTTTTAG MSQYSHQEIPMGYPAPPPSYPAGEQDKVGKSGPYVAAPPPVGYPIVSSEDADLATLLVAGLVEMRLVFQF Homology
BLAST of HG10005244 vs. NCBI nr
Match: XP_011659032.1 (cysteine-rich and transmembrane domain-containing protein WIH2 [Cucumis sativus]) HSP 1 Score: 80.9 bits (198), Expect = 4.9e-12 Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 0
BLAST of HG10005244 vs. NCBI nr
Match: XP_008447127.1 (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo] >KAA0056521.1 cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa] >TYK12091.1 cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa]) HSP 1 Score: 80.9 bits (198), Expect = 4.9e-12 Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 0
BLAST of HG10005244 vs. NCBI nr
Match: KAE8646099.1 (hypothetical protein Csa_015748 [Cucumis sativus]) HSP 1 Score: 80.9 bits (198), Expect = 4.9e-12 Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 0
BLAST of HG10005244 vs. NCBI nr
Match: KAG7023002.1 (hypothetical protein SDJN02_16738, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 77.0 bits (188), Expect = 7.1e-11 Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 0
BLAST of HG10005244 vs. NCBI nr
Match: KAG6589304.1 (hypothetical protein SDJN03_17869, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 77.0 bits (188), Expect = 7.1e-11 Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 0
BLAST of HG10005244 vs. ExPASy TrEMBL
Match: A0A5A7USJ3 (Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00200 PE=3 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.4e-12 Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 0
BLAST of HG10005244 vs. ExPASy TrEMBL
Match: A0A0A0K5N8 (CYSTM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G237300 PE=3 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.4e-12 Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 0
BLAST of HG10005244 vs. ExPASy TrEMBL
Match: A0A1S3BHK1 (cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo OX=3656 GN=LOC103489653 PE=3 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.4e-12 Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 0
BLAST of HG10005244 vs. ExPASy TrEMBL
Match: A0A6J1D469 (cysteine-rich and transmembrane domain-containing protein B-like OS=Momordica charantia OX=3673 GN=LOC111016829 PE=3 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.2e-08 Identity = 34/45 (75.56%), Postives = 35/45 (77.78%), Query Frame = 0
BLAST of HG10005244 vs. ExPASy TrEMBL
Match: A0A6J1JEV3 (cysteine-rich and transmembrane domain-containing protein B-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486275 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 5.7e-06 Identity = 27/35 (77.14%), Postives = 29/35 (82.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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