HG10005233 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005233
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	X8 domain-containing protein
Location	Chr07: 703681 .. 705174 (-)
RNA-Seq Expression	HG10005233
Synteny	HG10005233

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGGACACACGAGAGAGCTAAACCATGAGAATCAGAAATTCAGTTCCCCAATCTCAACCACTCAAAGAGATATCACCACCCCTATAACAACTGTTCCCACAATAATTCTTTCCAATCCCACCGTGTCAACTCCATTTATCAATCCAACTTCAACCTCGGACACGTATTCTCCGGCCATGGAATCTCCCAAAAGATCATCTCCACCATCTTCAGGGGCTAGCTGGTGCATTGCTAGTCAAAGTGCATCACAAAAGGCATTGCAAATTGCTCTAGATTACGCATGTGGCTATGGTGGTACTGACTGCTCAGCAATTCAAGCTGGTCAGAGCTGTTACAACCCAAACACCATTTATGATCATGCCTCCTACGCCTTCAATAGCTACTATCAAAAGAATCCTGTCCCAAATAGCTGTAACTTTGGTGGGACTGCCGTCATTACTAGCACTGACCCAAGTATGTTGCTTCCTTCAAAAGTTGTTTCTTTGTTACCTCACTGGATAATAATGTGTTATTTTACCATTCTCTCTCCTTTTCTTTTTTCTTCCTTTTTTTTTAAGGGGAGGGGTCAAGAGAGGACAGAGCAAGATAAGGCAAACTTTTTATAATTTGGTCACAATACTTTAGTGCTACAAGGTTTAACTGATTCCCTTAACAAGACCAAAGAATCAAATAGTCTTACCATTGAAACAGAACCCAAATTGTTGCAATGCCAACTGAGAGTTCCTTCTGAACAACCAGAAGCTTTGGAAGTATTAAAAAAAACAGCCTTTGTGAACCAACTCTATTTGTCCTCTTTCACCTTCTTAAAATCTTCTATGGGAAGTGTGGATATGAAGAAAATTAGTCCTTTCTTATTTTGAAGTTAATGATCAGTAACTCCAAATCTAATACTCAGGGGGAATTCAGCTTTACCCACAGCCCAGCCCCCCCCCCCCCCCCCCCCCCCCCAAAATAATAATAATAATAATAAATAAATAACACCTTTTCCCCTTGGGTTGGTGAAGGAAGAAGGTTGGTTGTGTCTGTAGGGACTATAAAGTGATGTGAATTATTGAAGCTGTAAGGGTGTAGTGGAATTCTTCTTTCTGCAACTGCAAGATGTTTAGGGACATAAAACTTCATAGATTGACTCTGTTTCTATAAAGTGTTGTTTATGTCTTTTCCCATCACTATTTTTTTTTCAGGTACTATGGCCTGTCAGTACACATCCACTAGGTAAAATCCCCATCTTCCATTGCTTCCATTTGCTTTCCTTTCCTGCTACCACCATTGATGTCCTAACAATGACACTACCTTTTTTTCAACTCTCCAGCACAAGTTCATCAGTTCTGAACACCACAAATTCCAAGGGATCAACAGTGTTTGGTGCTGTACCCTCAAGCCCCTCTCCTTCAGCAGCAACTTGTCAAGAAATAAATGTTCTGCAACAATTATTGTTGTTGACCATAGTTTCTCTCAGATTATTACACAACAACAATCTTCATGGCTGA

mRNA sequence

ATGACAGGACACACGAGAGAGCTAAACCATGAGAATCAGAAATTCAGTTCCCCAATCTCAACCACTCAAAGAGATATCACCACCCCTATAACAACTGTTCCCACAATAATTCTTTCCAATCCCACCGTGTCAACTCCATTTATCAATCCAACTTCAACCTCGGACACGTATTCTCCGGCCATGGAATCTCCCAAAAGATCATCTCCACCATCTTCAGGGGCTAGCTGGTGCATTGCTAGTCAAAGTGCATCACAAAAGGCATTGCAAATTGCTCTAGATTACGCATGTGGCTATGGTGGTACTGACTGCTCAGCAATTCAAGCTGGTCAGAGCTGTTACAACCCAAACACCATTTATGATCATGCCTCCTACGCCTTCAATAGCTACTATCAAAAGAATCCTGTCCCAAATAGCTGTAACTTTGGTGGGACTGCCGTCATTACTAGCACTGACCCAAGTACTATGGCCTGTCAGTACACATCCACTAGCACAAGTTCATCAGTTCTGAACACCACAAATTCCAAGGGATCAACAGTGTTTGGTGCTGTACCCTCAAGCCCCTCTCCTTCAGCAGCAACTTGTCAAGAAATAAATGTTCTGCAACAATTATTGTTGTTGACCATAGTTTCTCTCAGATTATTACACAACAACAATCTTCATGGCTGA

Coding sequence (CDS)

ATGACAGGACACACGAGAGAGCTAAACCATGAGAATCAGAAATTCAGTTCCCCAATCTCAACCACTCAAAGAGATATCACCACCCCTATAACAACTGTTCCCACAATAATTCTTTCCAATCCCACCGTGTCAACTCCATTTATCAATCCAACTTCAACCTCGGACACGTATTCTCCGGCCATGGAATCTCCCAAAAGATCATCTCCACCATCTTCAGGGGCTAGCTGGTGCATTGCTAGTCAAAGTGCATCACAAAAGGCATTGCAAATTGCTCTAGATTACGCATGTGGCTATGGTGGTACTGACTGCTCAGCAATTCAAGCTGGTCAGAGCTGTTACAACCCAAACACCATTTATGATCATGCCTCCTACGCCTTCAATAGCTACTATCAAAAGAATCCTGTCCCAAATAGCTGTAACTTTGGTGGGACTGCCGTCATTACTAGCACTGACCCAAGTACTATGGCCTGTCAGTACACATCCACTAGCACAAGTTCATCAGTTCTGAACACCACAAATTCCAAGGGATCAACAGTGTTTGGTGCTGTACCCTCAAGCCCCTCTCCTTCAGCAGCAACTTGTCAAGAAATAAATGTTCTGCAACAATTATTGTTGTTGACCATAGTTTCTCTCAGATTATTACACAACAACAATCTTCATGGCTGA

Protein sequence

MTGHTRELNHENQKFSSPISTTQRDITTPITTVPTIILSNPTVSTPFINPTSTSDTYSPAMESPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQSCYNPNTIYDHASYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSSVLNTTNSKGSTVFGAVPSSPSPSAATCQEINVLQQLLLLTIVSLRLLHNNNLHG

Homology

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BLAST of HG10005233 vs. NCBI nr
Match: XP_038887351.1 (glucan endo-1,3-beta-glucosidase 3-like isoform X1 [Benincasa hispida])

HSP 1 Score: 396.0 bits (1016), Expect = 2.2e-106
Identity = 208/219 (94.98%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 3   GHTRELNHENQKFSSPISTTQRDITTPITTVPTIILSNPTVSTPFINPTSTSDTYSPAME 62
           GHTRELNHENQKFSSP+STTQRDITTPITTVPTIILSNPT STPFINPTST+DTYSP M 
Sbjct: 53  GHTRELNHENQKFSSPVSTTQRDITTPITTVPTIILSNPTASTPFINPTSTADTYSPVMG 112

Query: 63  SPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQSCYNPNTIYDHA 122
           SPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQSCYNPNTI+DHA
Sbjct: 113 SPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQSCYNPNTIHDHA 172

Query: 123 SYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSSVLNTTNSKGSTVFGA 182
           SYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSS+LNTTNSKGSTVFGA
Sbjct: 173 SYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSSILNTTNSKGSTVFGA 232

Query: 183 VPSSPSPSAATCQEINVLQQLLLLTIVSLRLLHNNNLHG 222
           VPSSPSPSAATCQEINVL QLLLLT+VSL LLH+NNLHG
Sbjct: 233 VPSSPSPSAATCQEINVL-QLLLLTMVSLILLHSNNLHG 270

[Close]

BLAST of HG10005233 vs. NCBI nr
Match: XP_038887352.1 (major pollen allergen Ole e 10-like isoform X2 [Benincasa hispida] >XP_038887353.1 major pollen allergen Ole e 10-like isoform X2 [Benincasa hispida])

HSP 1 Score: 396.0 bits (1016), Expect = 2.2e-106
Identity = 208/219 (94.98%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 3   GHTRELNHENQKFSSPISTTQRDITTPITTVPTIILSNPTVSTPFINPTSTSDTYSPAME 62
           GHTRELNHENQKFSSP+STTQRDITTPITTVPTIILSNPT STPFINPTST+DTYSP M 
Sbjct: 19  GHTRELNHENQKFSSPVSTTQRDITTPITTVPTIILSNPTASTPFINPTSTADTYSPVMG 78

Query: 63  SPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQSCYNPNTIYDHA 122
           SPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQSCYNPNTI+DHA
Sbjct: 79  SPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQSCYNPNTIHDHA 138

Query: 123 SYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSSVLNTTNSKGSTVFGA 182
           SYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSS+LNTTNSKGSTVFGA
Sbjct: 139 SYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSSILNTTNSKGSTVFGA 198

Query: 183 VPSSPSPSAATCQEINVLQQLLLLTIVSLRLLHNNNLHG 222
           VPSSPSPSAATCQEINVL QLLLLT+VSL LLH+NNLHG
Sbjct: 199 VPSSPSPSAATCQEINVL-QLLLLTMVSLILLHSNNLHG 236

[Close]

BLAST of HG10005233 vs. NCBI nr
Match: XP_031744909.1 (glucan endo-1,3-beta-glucosidase 12 isoform X1 [Cucumis sativus] >KAE8646097.1 hypothetical protein Csa_016385 [Cucumis sativus])

HSP 1 Score: 388.7 bits (997), Expect = 3.5e-104
Identity = 206/221 (93.21%), Postives = 213/221 (96.38%), Query Frame = 0


Query: 2   TGHTRELNHENQKFSS-PISTTQRDITTPITTVPTIILSNPTVSTPFINPTSTSDTYSPA 61
           +GHTRELNHENQKFSS P+  +QRDITTPITTVPTIILSNPTVSTPFINPTSTSDTYSPA
Sbjct: 129 SGHTRELNHENQKFSSRPVFISQRDITTPITTVPTIILSNPTVSTPFINPTSTSDTYSPA 188

Query: 62  MESPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQSCYNPNTIYD 121
           MESPKRSSPPSSGASWCIASQSASQK LQIALDYACGYGGTDCSAIQAGQ CYNPNTI+D
Sbjct: 189 MESPKRSSPPSSGASWCIASQSASQKVLQIALDYACGYGGTDCSAIQAGQRCYNPNTIHD 248

Query: 122 HASYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSSVLNTTNSKGSTVF 181
           HASYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSSVLNTTNSKGSTVF
Sbjct: 249 HASYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSSVLNTTNSKGSTVF 308

Query: 182 GAVPSSPSPSAATCQEINVLQQLLLLTIVSLRLLHNNNLHG 222
           GAVPSSP+PSAATCQEINVLQ+LLLLTIVSLRL H N L+G
Sbjct: 309 GAVPSSPTPSAATCQEINVLQRLLLLTIVSLRLFHINYLYG 349

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BLAST of HG10005233 vs. NCBI nr
Match: XP_016900361.1 (PREDICTED: glucan endo-1,3-beta-glucosidase 3-like [Cucumis melo] >XP_016900362.1 PREDICTED: glucan endo-1,3-beta-glucosidase 3-like [Cucumis melo] >XP_016900363.1 PREDICTED: glucan endo-1,3-beta-glucosidase 3-like [Cucumis melo])

HSP 1 Score: 387.9 bits (995), Expect = 5.9e-104
Identity = 206/220 (93.64%), Postives = 210/220 (95.45%), Query Frame = 0


Query: 3   GHTRELNHENQKFSS-PISTTQRDITTPITTVPTIILSNPTVSTPFINPTSTSDTYSPAM 62
           GH REL+HENQKFSS P+ T+QRDITTPITTVPTIILSNPT STPFINPTSTSDTYSPAM
Sbjct: 54  GHARELSHENQKFSSRPVFTSQRDITTPITTVPTIILSNPTASTPFINPTSTSDTYSPAM 113

Query: 63  ESPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQSCYNPNTIYDH 122
           ESPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQ CYNPNTI+DH
Sbjct: 114 ESPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDH 173

Query: 123 ASYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSSVLNTTNSKGSTVFG 182
           ASYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSSVLNTTNSKGSTVFG
Sbjct: 174 ASYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSSVLNTTNSKGSTVFG 233

Query: 183 AVPSSPSPSAATCQEINVLQQLLLLTIVSLRLLHNNNLHG 222
           AVPSSPSPSAATCQEI VLQQLL LTIVSL LLH N LHG
Sbjct: 234 AVPSSPSPSAATCQEIKVLQQLLSLTIVSLTLLHTNYLHG 273

[Close]

BLAST of HG10005233 vs. NCBI nr
Match: KAG6572453.1 (Glucan endo-1,3-beta-glucosidase 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 383.3 bits (983), Expect = 1.5e-102
Identity = 197/216 (91.20%), Postives = 209/216 (96.76%), Query Frame = 0


Query: 3   GHTRELNHENQKFSSPISTTQRDITTPITTVPTIILSNPTVSTPFINPTSTSDTYSPAME 62
           GHTRELNHENQKFSSP+STTQRDITTPITTVPTIILSNPT STPF+NPTSTSDTYSP ME
Sbjct: 34  GHTRELNHENQKFSSPVSTTQRDITTPITTVPTIILSNPTASTPFLNPTSTSDTYSPTME 93

Query: 63  SPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQSCYNPNTIYDHA 122
           SPKRSSPP SGASWCIASQSASQ ALQ+ALDYACG+GGTDCSAIQ GQ CYNPNTI++HA
Sbjct: 94  SPKRSSPPLSGASWCIASQSASQTALQVALDYACGHGGTDCSAIQTGQRCYNPNTIHNHA 153

Query: 123 SYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSSVLNTTNSKGSTVFGA 182
           SYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSS+LNTTNSKGSTVFG 
Sbjct: 154 SYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSSILNTTNSKGSTVFGG 213

Query: 183 VPSSPSPSAATCQEINVLQQLLLLTIVSLRLLHNNN 219
           VPSSPSPSAATCQEINV+QQLLL+T+VSLRLL++NN
Sbjct: 214 VPSSPSPSAATCQEINVVQQLLLVTMVSLRLLYSNN 249

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BLAST of HG10005233 vs. ExPASy Swiss-Prot
Match: Q9ZU91 (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2)

HSP 1 Score: 95.5 bits (236), Expect = 8.0e-19
Identity = 57/147 (38.78%), Postives = 87/147 (59.18%), Query Frame = 0


Query: 71  SSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQSCYNPNTIYDHASYAFNSYY 130
           ++  ++CIA +   +K LQ ALD+ACG G  DCSA+  G+SCY P+ +  H++YAFN+YY
Sbjct: 355 TTNQTFCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYY 414

Query: 131 QK-NPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSSVL-NTTN----SKGSTVFGAVP 190
           QK      SC+F G A +T+TDPS   C +  ++ S+  L N T+    S  ST  G +P
Sbjct: 415 QKMGKASGSCDFKGVATVTTTDPSRGTCVFPGSAKSNQTLGNNTSALAPSANSTTSGCIP 474

Query: 191 SSPSPSAATCQEINVLQQLLLLTIVSL 212
                  A+  ++ +L  LL++ +V L
Sbjct: 475 KYYHHPHASFGDLTLLSLLLIIALVFL 501

[Close]

BLAST of HG10005233 vs. ExPASy Swiss-Prot
Match: Q9FNQ2 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.6e-17
Identity = 53/125 (42.40%), Postives = 71/125 (56.80%), Query Frame = 0


Query: 72  SGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQSCYNPNTIYDHASYAFNSYYQ 131
           S ASWC+     S   LQ  LDYACG  G DC+  +  QSC+NP+ +  H +YA NS++Q
Sbjct: 17  SSASWCVCKTGLSDTVLQATLDYACG-NGADCNPTKPKQSCFNPDNVRSHCNYAVNSFFQ 76

Query: 132 -KNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSS-----VLNTTNSKGSTVFGAVPS 191
            K   P SCNF GTA  T++DPS   C + ++++ SS        TTN KGS     +P 
Sbjct: 77  KKGQSPGSCNFDGTATPTNSDPSYTGCAFPTSASGSSGSTTVTPGTTNPKGSPTTTTLPG 136

[Close]

BLAST of HG10005233 vs. ExPASy Swiss-Prot
Match: Q9FJU9 (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana OX=3702 GN=At5g56590 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.8e-16
Identity = 53/124 (42.74%), Postives = 74/124 (59.68%), Query Frame = 0


Query: 67  SSPPSSGA--SWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQSCYNPNTIYDHASY 126
           S   SSG+  SWCIAS  AS++ L+ ALD+ACG G  DC+AIQ  Q C+ P+T+  HAS+
Sbjct: 358 SGTNSSGSSNSWCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSHASF 417

Query: 127 AFNSYYQKNPVPN-SCNFGGTAVITSTDPSTMACQYTSTSTSSSVLNTTNSKGSTVFGAV 186
            FNSY+Q+N   + +C+FGG  V  + DPS   C Y +        N T +  +T   + 
Sbjct: 418 VFNSYFQQNRATDVACSFGGAGVKVNKDPSYDKCIYITAGG-----NKTKATNATALTSS 476

Query: 187 PSSP 188
            S+P
Sbjct: 478 ASTP 476

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BLAST of HG10005233 vs. ExPASy Swiss-Prot
Match: Q84V39 (Major pollen allergen Ole e 10 OS=Olea europaea OX=4146 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.7e-16
Identity = 47/113 (41.59%), Postives = 58/113 (51.33%), Query Frame = 0


Query: 50  PTSTSDTYSPAMESPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAG 109
           P  T     P   SP    P      WC+    A+   LQ  +DY C   G DC  IQA 
Sbjct: 11  PVPTPTPSVPTSSSPVPKPPTQGNKKWCVPKAEATDAQLQSNIDYVCSQSGMDCGPIQAN 70

Query: 110 QSCYNPNTIYDHASYAFNSYYQ-KNPVPNSCNFGGTAVITSTDPSTMACQYTS 162
            +C+NPNT+  HASYA NS+YQ K      C+F GT  ITS+DPS  +C + S
Sbjct: 71  GACFNPNTVRAHASYAMNSWYQSKGRNDFDCDFSGTGAITSSDPSNGSCSFLS 123

[Close]

BLAST of HG10005233 vs. ExPASy Swiss-Prot
Match: P52409 (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum OX=4565 GN=GLC1 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 6.3e-16
Identity = 47/112 (41.96%), Postives = 68/112 (60.71%), Query Frame = 0


Query: 52  STSDTYSP-AMESPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQ 111
           S + T SP    +P     PS G  WC+A   A+   LQ  ++YACG+   DC  IQ+G 
Sbjct: 352 SVAPTPSPNPSPNPSPKPAPSGGGKWCVAKDGANGTDLQNNINYACGF--VDCKPIQSGG 411

Query: 112 SCYNPNTIYDHASYAFNSYYQKNPVPN-SCNFGGTAVITSTDPSTMACQYTS 162
           +C++PN++  HASY  N+YYQ N   + +C+F GT ++TS+DPS   C+Y S
Sbjct: 412 ACFSPNSLQAHASYVMNAYYQANGHTDLACDFKGTGIVTSSDPSYGGCKYVS 461

[Close]

BLAST of HG10005233 vs. ExPASy TrEMBL
Match: A0A1S4DWJ2 (glucan endo-1,3-beta-glucosidase 3-like OS=Cucumis melo OX=3656 GN=LOC103489662 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 2.9e-104
Identity = 206/220 (93.64%), Postives = 210/220 (95.45%), Query Frame = 0


Query: 3   GHTRELNHENQKFSS-PISTTQRDITTPITTVPTIILSNPTVSTPFINPTSTSDTYSPAM 62
           GH REL+HENQKFSS P+ T+QRDITTPITTVPTIILSNPT STPFINPTSTSDTYSPAM
Sbjct: 54  GHARELSHENQKFSSRPVFTSQRDITTPITTVPTIILSNPTASTPFINPTSTSDTYSPAM 113

Query: 63  ESPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQSCYNPNTIYDH 122
           ESPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQ CYNPNTI+DH
Sbjct: 114 ESPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDH 173

Query: 123 ASYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSSVLNTTNSKGSTVFG 182
           ASYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSSVLNTTNSKGSTVFG
Sbjct: 174 ASYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSSVLNTTNSKGSTVFG 233

Query: 183 AVPSSPSPSAATCQEINVLQQLLLLTIVSLRLLHNNNLHG 222
           AVPSSPSPSAATCQEI VLQQLL LTIVSL LLH N LHG
Sbjct: 234 AVPSSPSPSAATCQEIKVLQQLLSLTIVSLTLLHTNYLHG 273

[Close]

BLAST of HG10005233 vs. ExPASy TrEMBL
Match: A0A0A0K8Y4 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G235750 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.1e-103
Identity = 204/221 (92.31%), Postives = 213/221 (96.38%), Query Frame = 0


Query: 2   TGHTRELNHENQKFSS-PISTTQRDITTPITTVPTIILSNPTVSTPFINPTSTSDTYSPA 61
           +GHTRELNHENQKFSS P+ T+QRDITTPITTVPTIILSNPT STPFINPTSTSDTYSPA
Sbjct: 34  SGHTRELNHENQKFSSRPVFTSQRDITTPITTVPTIILSNPTPSTPFINPTSTSDTYSPA 93

Query: 62  MESPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQSCYNPNTIYD 121
           MESPKRSSPPSSGASWCIASQ+AS+K LQIALDYACGYGGTDCSAIQAGQ CYNPNTI+D
Sbjct: 94  MESPKRSSPPSSGASWCIASQNASRKVLQIALDYACGYGGTDCSAIQAGQRCYNPNTIHD 153

Query: 122 HASYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSSVLNTTNSKGSTVF 181
           HASYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSSVLNTTNSKGSTVF
Sbjct: 154 HASYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSSVLNTTNSKGSTVF 213

Query: 182 GAVPSSPSPSAATCQEINVLQQLLLLTIVSLRLLHNNNLHG 222
           GAVPSSP+PSAATCQEINVLQ+LLLLTIVSLRL H N L+G
Sbjct: 214 GAVPSSPTPSAATCQEINVLQRLLLLTIVSLRLFHINYLYG 254

[Close]

BLAST of HG10005233 vs. ExPASy TrEMBL
Match: A0A0A0K3M5 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G251640 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 7.1e-103
Identity = 202/222 (90.99%), Postives = 211/222 (95.05%), Query Frame = 0


Query: 1   MTGHTRELNHENQKFSS-PISTTQRDITTPITTVPTIILSNPTVSTPFINPTSTSDTYSP 60
           MTGHTRELNHENQKFSS P+  +QRDITTPITTVPTIILSNPT STPFINPTSTSDTYSP
Sbjct: 1   MTGHTRELNHENQKFSSRPVFISQRDITTPITTVPTIILSNPTPSTPFINPTSTSDTYSP 60

Query: 61  AMESPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQSCYNPNTIY 120
           AMESPKRSSPPSSG SWCIASQ+AS+K LQIALDY CGYGGTDCSAIQAGQ CYNPNTI+
Sbjct: 61  AMESPKRSSPPSSGTSWCIASQNASRKVLQIALDYTCGYGGTDCSAIQAGQRCYNPNTIH 120

Query: 121 DHASYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSSVLNTTNSKGSTV 180
           DHASYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMAC+YTSTSTSSSVLNTTNSKGSTV
Sbjct: 121 DHASYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACEYTSTSTSSSVLNTTNSKGSTV 180

Query: 181 FGAVPSSPSPSAATCQEINVLQQLLLLTIVSLRLLHNNNLHG 222
           FGAVPSSP+PSAATCQEINVLQ+LLLLTIVSLRL H N L+G
Sbjct: 181 FGAVPSSPTPSAATCQEINVLQRLLLLTIVSLRLFHINYLYG 222

[Close]

BLAST of HG10005233 vs. ExPASy TrEMBL
Match: A0A6J1D2V3 (glucan endo-1,3-beta-glucosidase 12-like OS=Momordica charantia OX=3673 GN=LOC111016792 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.7e-96
Identity = 185/206 (89.81%), Postives = 196/206 (95.15%), Query Frame = 0


Query: 3   GHTRELNHENQKFSSPISTTQRDITTPITTVPTIILSNPTVSTPFINPTSTSDTYSPAME 62
           GHTRELNHE +KF+SP+STTQRDITTPITTVPTIILSNPT STP INPTSTSD+YSPAME
Sbjct: 71  GHTRELNHEKKKFNSPVSTTQRDITTPITTVPTIILSNPTASTPLINPTSTSDSYSPAME 130

Query: 63  SPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQSCYNPNTIYDHA 122
           +PK+SSPPSSG SWCIASQS SQ ALQ+A+DYACGYGG DCSAIQ GQSCYNPNTI+DHA
Sbjct: 131 TPKKSSPPSSGGSWCIASQSVSQTALQVAIDYACGYGGADCSAIQPGQSCYNPNTIHDHA 190

Query: 123 SYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSSVLNTTNSKGSTVFGA 182
           SYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQY STSTSSS+LNTTNSKGSTVFGA
Sbjct: 191 SYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYASTSTSSSILNTTNSKGSTVFGA 250

Query: 183 VPSSPSPSAATCQEINVLQQLLLLTI 209
           VPSSPSPSAA CQEINVLQQLLLLT+
Sbjct: 251 VPSSPSPSAAHCQEINVLQQLLLLTV 276

[Close]

BLAST of HG10005233 vs. ExPASy TrEMBL
Match: A0A5A7SSE1 (Glucan endo-1,3-beta-glucosidase 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00020 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.9e-96
Identity = 189/198 (95.45%), Postives = 193/198 (97.47%), Query Frame = 0


Query: 1   MTGHTRELNHENQKFSS-PISTTQRDITTPITTVPTIILSNPTVSTPFINPTSTSDTYSP 60
           MTGH REL+HENQKFSS P+ T+QRDITTPITTVPTIILSNPT STPFINPTSTSDTYSP
Sbjct: 1   MTGHARELSHENQKFSSRPVFTSQRDITTPITTVPTIILSNPTASTPFINPTSTSDTYSP 60

Query: 61  AMESPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQSCYNPNTIY 120
           AMESPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQ CYNPNTI+
Sbjct: 61  AMESPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQRCYNPNTIH 120

Query: 121 DHASYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSSVLNTTNSKGSTV 180
           DHASYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSSVLNTTNSKGSTV
Sbjct: 121 DHASYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTSTSSSVLNTTNSKGSTV 180

Query: 181 FGAVPSSPSPSAATCQEI 198
           FGAVPSSPSPSAATCQEI
Sbjct: 181 FGAVPSSPSPSAATCQEI 198

[Close]

BLAST of HG10005233 vs. TAIR 10
Match: AT2G30933.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 152.5 bits (384), Expect = 3.9e-37
Identity = 90/191 (47.12%), Postives = 118/191 (61.78%), Query Frame = 0


Query: 23  QRDITTPITTVPTIILSNPTVSTPFINPTSTSDTYSPAMESPKRSSPPSSGA-----SWC 82
           ++DITTP+ T       NPT +   + P S SD  + A       S P   A     SWC
Sbjct: 31  EKDITTPLAT-------NPTTTPTTVVPNSDSDASAVATTPLTIPSSPHGVAYPGDQSWC 90

Query: 83  IASQSASQKALQIALDYACGYGGTDCSAIQAGQSCYNPNTIYDHASYAFNSYYQKNPVPN 142
           +A ++ ++ ALQ ALDYACG GG DCS IQ G +CYNPN++  HAS+AFNSYYQKNP+P+
Sbjct: 91  VARENVAKMALQAALDYACGIGGADCSEIQEGGNCYNPNSLRAHASFAFNSYYQKNPIPS 150

Query: 143 SCNFGGTAVITSTDPSTMACQYTSTSTSSSVLNTTNSKGSTVFGAVPS--SPSPSAATCQ 202
           SCNF GTA+  S DPS  +C + STSTS S+LN T+  G  +FG +PS  +P P A+T  
Sbjct: 151 SCNFDGTAITISADPSLGSCHFPSTSTSESILNVTSEDGLGLFGRIPSHPTPKPEASTSS 210

Query: 203 EINVLQQLLLL 207
              ++  L  L
Sbjct: 211 SRTLISFLYFL 214

[Close]

BLAST of HG10005233 vs. TAIR 10
Match: AT1G29380.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 124.4 bits (311), Expect = 1.1e-28
Identity = 65/118 (55.08%), Postives = 81/118 (68.64%), Query Frame = 0


Query: 76  WCIASQSASQKALQIALDYACGYGGTDCSAIQAGQSCYNPNTIYDHASYAFNSYYQKNPV 135
           WCIA  +AS  +LQ+ALDYACGYGG DC  IQ G +CY PNTI DHAS+AFNSYYQK+P 
Sbjct: 148 WCIAKANASPTSLQVALDYACGYGGADCGQIQQGAACYEPNTIRDHASFAFNSYYQKHPG 207

Query: 136 PNSCNFGGTAVITSTDPSTMACQYTSTSTSSSVLNTTNSKGSTVFGAVPSSPSPSAAT 194
            +SCNFGG A +TSTDPS  +C ++S+S + S  +  +      F + PSS  P   T
Sbjct: 208 SDSCNFGGAAQLTSTDPSKGSCHFSSSSGTVST-SPPSQMSPPDFSSPPSSTYPPPIT 264

[Close]

BLAST of HG10005233 vs. TAIR 10
Match: AT2G30933.2 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 124.4 bits (311), Expect = 1.1e-28
Identity = 69/136 (50.74%), Postives = 87/136 (63.97%), Query Frame = 0


Query: 23  QRDITTPITTVPTIILSNPTVSTPFINPTSTSDTYSPAMESPKRSSPPSSGA-----SWC 82
           ++DITTP+ T       NPT +   + P S SD  + A       S P   A     SWC
Sbjct: 31  EKDITTPLAT-------NPTTTPTTVVPNSDSDASAVATTPLTIPSSPHGVAYPGDQSWC 90

Query: 83  IASQSASQKALQIALDYACGYGGTDCSAIQAGQSCYNPNTIYDHASYAFNSYYQKNPVPN 142
           +A ++ ++ ALQ ALDYACG GG DCS IQ G +CYNPN++  HAS+AFNSYYQKNP+P+
Sbjct: 91  VARENVAKMALQAALDYACGIGGADCSEIQEGGNCYNPNSLRAHASFAFNSYYQKNPIPS 150

Query: 143 SCNFGGTAVITSTDPS 154
           SCNF GTA+  S DPS
Sbjct: 151 SCNFDGTAITISADPS 159

[Close]

BLAST of HG10005233 vs. TAIR 10
Match: AT1G09460.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 114.0 bits (284), Expect = 1.5e-25
Identity = 77/180 (42.78%), Postives = 102/180 (56.67%), Query Frame = 0


Query: 18  PISTTQRDITTPITTVPTIILSNPTVSTPFINPTSTSDTYSPAMESPKRSSPPS-SGASW 77
           P+ T      TP  T P   ++NP    P   P+ T     P +  P  S+ PS SG SW
Sbjct: 81  PVITIPPPTLTPPVTNP---VTNPVTQYPPTQPSGTVPVPVPVVAPPVVSNSPSVSGQSW 140

Query: 78  CIASQSASQKALQIALDYACGYGGTDCSAIQAGQSCYNPNTIYDHASYAFNSYYQKNPVP 137
           C+A   ASQ +LQ ALDYACG    DCS +Q G +CY+P ++  HAS+AFNSYYQKNP P
Sbjct: 141 CVAKPGASQVSLQQALDYACGI--ADCSQLQQGGNCYSPISLQSHASFAFNSYYQKNPSP 200

Query: 138 NSCNFGGTAVITSTDPSTMACQY---TSTSTSSSVLNTTNSKGSTVFGAVPSSPSPSAAT 194
            SC+FGG A + +T+PST +C Y   +STST  +   TT +  +      P + +P   T
Sbjct: 201 QSCDFGGAASLVNTNPSTGSCIYQTGSSTSTPMTAGTTTPTPSTQTVNQPPVTSTPIIPT 255

[Close]

BLAST of HG10005233 vs. TAIR 10
Match: AT4G13600.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 97.1 bits (240), Expect = 1.9e-20
Identity = 56/117 (47.86%), Postives = 70/117 (59.83%), Query Frame = 0


Query: 71  SSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQSCYNPNTIYDHASYAFNSYY 130
           SS A WC+A    + +ALQ ALDYAC   G DC+ IQ    C+ PNT+  HASYAFNSY+
Sbjct: 56  SSAAMWCVARFDVTSQALQAALDYACA-AGADCAPIQPNGLCFLPNTVQAHASYAFNSYF 115

Query: 131 QKNPV-PNSCNFGGTAVITSTDPSTMACQYTSTSTSSSVLNTTNSKGSTVFGAVPSS 187
           Q+  + P SCNF GT+ I  TDPS  +C Y      +SV N   S  +T  G  PS+
Sbjct: 116 QRAAMAPGSCNFAGTSTIAKTDPSYGSCVY-----PNSVRNAGGSASTTTVGGTPST 166

The following BLAST results are available for this feature:

BLAST of HG10005233 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887351.1	2.2e-106	94.98	glucan endo-1,3-beta-glucosidase 3-like isoform X1 [Benincasa hispida]	[more]
XP_038887352.1	2.2e-106	94.98	major pollen allergen Ole e 10-like isoform X2 [Benincasa hispida] >XP_038887353...	[more]
XP_031744909.1	3.5e-104	93.21	glucan endo-1,3-beta-glucosidase 12 isoform X1 [Cucumis sativus] >KAE8646097.1 h...	[more]
XP_016900361.1	5.9e-104	93.64	PREDICTED: glucan endo-1,3-beta-glucosidase 3-like [Cucumis melo] >XP_016900362....	[more]
KAG6572453.1	1.5e-102	91.20	Glucan endo-1,3-beta-glucosidase 1, partial [Cucurbita argyrosperma subsp. soror...	[more]

BLAST of HG10005233 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZU91	8.0e-19	38.78	Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 ...	[more]
Q9FNQ2	2.6e-17	42.40	PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1...	[more]
Q9FJU9	2.8e-16	42.74	Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana OX=3702 GN=At5g56590...	[more]
Q84V39	3.7e-16	41.59	Major pollen allergen Ole e 10 OS=Olea europaea OX=4146 PE=1 SV=1	[more]
P52409	6.3e-16	41.96	Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum OX=4565 GN=GLC1 PE=2 SV=1	[more]

BLAST of HG10005233 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DWJ2	2.9e-104	93.64	glucan endo-1,3-beta-glucosidase 3-like OS=Cucumis melo OX=3656 GN=LOC103489662 ...	[more]
A0A0A0K8Y4	1.1e-103	92.31	X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G235750 PE=4 SV=...	[more]
A0A0A0K3M5	7.1e-103	90.99	X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G251640 PE=4 SV=...	[more]
A0A6J1D2V3	1.7e-96	89.81	glucan endo-1,3-beta-glucosidase 12-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A5A7SSE1	2.9e-96	95.45	Glucan endo-1,3-beta-glucosidase 3-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of HG10005233 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30933.1	3.9e-37	47.12	Carbohydrate-binding X8 domain superfamily protein	[more]
AT1G29380.1	1.1e-28	55.08	Carbohydrate-binding X8 domain superfamily protein	[more]
AT2G30933.2	1.1e-28	50.74	Carbohydrate-binding X8 domain superfamily protein	[more]
AT1G09460.1	1.5e-25	42.78	Carbohydrate-binding X8 domain superfamily protein	[more]
AT4G13600.1	1.9e-20	47.86	Carbohydrate-binding X8 domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012946	X8 domain	SMART	SM00768	X8_cls	coord: 75..159 e-value: 1.0E-43 score: 161.2
IPR012946	X8 domain	PFAM	PF07983	X8	coord: 76..145 e-value: 3.4E-20 score: 72.5
None	No IPR available	GENE3D	1.20.58.1040		coord: 71..181 e-value: 3.6E-11 score: 45.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR31044:SF53	CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN	coord: 38..201
IPR044788	Carbohydrate-binding X8 domain-containing protein, plant	PANTHER	PTHR31044	BETA-1,3 GLUCANASE	coord: 38..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005233.1	HG10005233.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds