HG10005188 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005188
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	Chr07: 329684 .. 330313 (+)
RNA-Seq Expression	HG10005188
Synteny	HG10005188

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAAGAAGTGAGCAAGAACGAAATCAAAACCATAATCTCAACAATAGGACGCACAAAGTAATCGTGCATGGCTCCATGCATAAGTATATTCCAATTTTATTCTTTGTGATAGTTGTTGTGGCTTTGGCTCTCTGGCTTGCCTACCGCCCCAAAAACCCTGAGTTCGCAGTGGTCAGGGCTACCATAAACAAGTTGATTGTGTCGCCTCCATTGCAGTTGTCAACAATAATGGAATTCACCATTATTACAAGGAACCCCAACAAGCACGTTTCTATTTACTATGATGAATTAGTTGGGATGGTGTTGTATAAGGACGAACATATAACGCCACAGGTAATGTTGTCTCCACTAATGAATGAAAAGAAGAGCACGGTGGAGATATCGCCGGTGTTGGGCGGTGGGGCGGTGGCCGTGACGAAAGAGGTGGCAAATGAGATAGTGAGAAGTGGGAATGGGATTTGGGTGAAAGTAGTGTTGATGGGAAGAGTCAAATGGAAATTTGGAGGCATCAAAATTGGTTATTATGAAGTTAATGTGAAATGTGATGTGTTGATGAATAATTCAAAGAAAGGCTTGATGGGTTCACTTCCTTTGCCTCATTCTACCCCTTGCGAAGTTGATTTTTAG

mRNA sequence

ATGATAAGAAGTGAGCAAGAACGAAATCAAAACCATAATCTCAACAATAGGACGCACAAAGTAATCGTGCATGGCTCCATGCATAAGTATATTCCAATTTTATTCTTTGTGATAGTTGTTGTGGCTTTGGCTCTCTGGCTTGCCTACCGCCCCAAAAACCCTGAGTTCGCAGTGGTCAGGGCTACCATAAACAAGTTGATTGTGTCGCCTCCATTGCAGTTGTCAACAATAATGGAATTCACCATTATTACAAGGAACCCCAACAAGCACGTTTCTATTTACTATGATGAATTAGTTGGGATGGTGTTGTATAAGGACGAACATATAACGCCACAGGTAATGTTGTCTCCACTAATGAATGAAAAGAAGAGCACGGTGGAGATATCGCCGGTGTTGGGCGGTGGGGCGGTGGCCGTGACGAAAGAGGTGGCAAATGAGATAGTGAGAAGTGGGAATGGGATTTGGGTGAAAGTAGTGTTGATGGGAAGAGTCAAATGGAAATTTGGAGGCATCAAAATTGGTTATTATGAAGTTAATGTGAAATGTGATGTGTTGATGAATAATTCAAAGAAAGGCTTGATGGGTTCACTTCCTTTGCCTCATTCTACCCCTTGCGAAGTTGATTTTTAG

Coding sequence (CDS)

ATGATAAGAAGTGAGCAAGAACGAAATCAAAACCATAATCTCAACAATAGGACGCACAAAGTAATCGTGCATGGCTCCATGCATAAGTATATTCCAATTTTATTCTTTGTGATAGTTGTTGTGGCTTTGGCTCTCTGGCTTGCCTACCGCCCCAAAAACCCTGAGTTCGCAGTGGTCAGGGCTACCATAAACAAGTTGATTGTGTCGCCTCCATTGCAGTTGTCAACAATAATGGAATTCACCATTATTACAAGGAACCCCAACAAGCACGTTTCTATTTACTATGATGAATTAGTTGGGATGGTGTTGTATAAGGACGAACATATAACGCCACAGGTAATGTTGTCTCCACTAATGAATGAAAAGAAGAGCACGGTGGAGATATCGCCGGTGTTGGGCGGTGGGGCGGTGGCCGTGACGAAAGAGGTGGCAAATGAGATAGTGAGAAGTGGGAATGGGATTTGGGTGAAAGTAGTGTTGATGGGAAGAGTCAAATGGAAATTTGGAGGCATCAAAATTGGTTATTATGAAGTTAATGTGAAATGTGATGTGTTGATGAATAATTCAAAGAAAGGCTTGATGGGTTCACTTCCTTTGCCTCATTCTACCCCTTGCGAAGTTGATTTTTAG

Protein sequence

MIRSEQERNQNHNLNNRTHKVIVHGSMHKYIPILFFVIVVVALALWLAYRPKNPEFAVVRATINKLIVSPPLQLSTIMEFTIITRNPNKHVSIYYDELVGMVLYKDEHITPQVMLSPLMNEKKSTVEISPVLGGGAVAVTKEVANEIVRSGNGIWVKVVLMGRVKWKFGGIKIGYYEVNVKCDVLMNNSKKGLMGSLPLPHSTPCEVDF

Homology

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BLAST of HG10005188 vs. NCBI nr
Match: KGN47958.1 (hypothetical protein Csa_003254 [Cucumis sativus])

HSP 1 Score: 240.4 bits (612), Expect = 1.4e-59
Identity = 128/212 (60.38%), Postives = 163/212 (76.89%), Query Frame = 0


Query: 4   SEQERNQNHNLNNRTHKVIVHGSMHKYIPILFFVIVVVA-LALWLAYRPKNPEFAVVRAT 63
           SE+ R++ HN+N++T+K + +G + KY+ ILF + V++A  ALWLAYRPKNPEF+VV A 
Sbjct: 4   SEECRDEEHNVNSKTNK-LQYGFICKYVTILFVLAVIMASCALWLAYRPKNPEFSVVEAV 63

Query: 64  INKLIVSPPLQLSTIMEFTIITRNPNKHVSIYYDELVGMVLYKDEHITPQVMLSPLMNEK 123
           I  L VSPP QL T M  TI+TRNPNK  SIYYD+L G+VLYKD+ ITPQVMLSP++NEK
Sbjct: 64  IYNLTVSPPSQLLTTMACTIVTRNPNKLSSIYYDQLTGVVLYKDQQITPQVMLSPVINEK 123

Query: 124 KSTVEISPVLGG---GAVAVTKEVANEIVRSGNG--IWVKVVLMGRVKWKFGGIKIGYYE 183
           K+TVEI   + G    AV+VT+E+ANEIVRS      W++VVLMGRVKWK GG++IGYY 
Sbjct: 124 KTTVEIPLKISGAAVSAVSVTEELANEIVRSTESGLFWLRVVLMGRVKWKLGGVRIGYYA 183

Query: 184 VNVKCDVLMNNSKKGLMGSLPLPHSTPCEVDF 210
           ++VKCDVL+ N+K   +GSLP P ST C VDF
Sbjct: 184 LSVKCDVLVTNTKDDSVGSLPSPRSTTCNVDF 214

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BLAST of HG10005188 vs. NCBI nr
Match: XP_004140243.1 (NDR1/HIN1-like protein 26 [Cucumis sativus])

HSP 1 Score: 219.5 bits (558), Expect = 2.6e-53
Identity = 112/175 (64.00%), Postives = 135/175 (77.14%), Query Frame = 0


Query: 40  VVALALWLAYRPKNPEFAVVRATINKLIVSPPLQLSTIMEFTIITRNPNKHVSIYYDELV 99
           + + ALWLAYRPKNPEF+VV A I  L VSPP QL T M  TI+TRNPNK  SIYYD+L 
Sbjct: 1   MASCALWLAYRPKNPEFSVVEAVIYNLTVSPPSQLLTTMACTIVTRNPNKLSSIYYDQLT 60

Query: 100 GMVLYKDEHITPQVMLSPLMNEKKSTVEISPVLGG---GAVAVTKEVANEIVRSGNG--I 159
           G+VLYKD+ ITPQVMLSP++NEKK+TVEI   + G    AV+VT+E+ANEIVRS      
Sbjct: 61  GVVLYKDQQITPQVMLSPVINEKKTTVEIPLKISGAAVSAVSVTEELANEIVRSTESGLF 120

Query: 160 WVKVVLMGRVKWKFGGIKIGYYEVNVKCDVLMNNSKKGLMGSLPLPHSTPCEVDF 210
           W++VVLMGRVKWK GG++IGYY ++VKCDVL+ N+K   +GSLP P ST C VDF
Sbjct: 121 WLRVVLMGRVKWKLGGVRIGYYALSVKCDVLVTNTKDDSVGSLPSPRSTTCNVDF 175

[Close]

BLAST of HG10005188 vs. NCBI nr
Match: XP_022146145.1 (NDR1/HIN1-like protein 12 [Momordica charantia])

HSP 1 Score: 178.7 bits (452), Expect = 5.2e-41
Identity = 98/187 (52.41%), Postives = 129/187 (68.98%), Query Frame = 0


Query: 24  HGSMHKYIPILFFVIVVVALALWLAYRPKNPEFAVVRATINKLIVSPPLQLSTIMEFTII 83
           H S+   I I   +I VVAL LWL YRP +P+F VV A I  L +S P  LST M+FTII
Sbjct: 39  HRSVCACISIFLLMIGVVALILWLVYRPTDPQFTVVSAAIYDLNMSSPPLLSTTMQFTII 98

Query: 84  TRNPNKHVSIYYDELVGMVLYKDEHITPQVMLSPLMNEKKSTVEISPVLGGGAVAVTKEV 143
           TRNPN+ VSIYYD L   V Y+++ IT QVML PL +EK+ST+ +SPVLGGGAV  + EV
Sbjct: 99  TRNPNRRVSIYYDRLTAFVSYRNQQITSQVMLPPLFHEKRSTLAMSPVLGGGAVPTSLEV 158

Query: 144 ANEIV--RSGNGIWVKVVLMGRVKWKFGGIKIGYYEVNVKCDVLMNNSKKGLMGSLPLPH 203
            N +V  ++   I ++V L+GR++WK G +K G+Y V V+CDVL+   K+GL+G +PL  
Sbjct: 159 VNGLVTDQTIGVIGLRVALLGRIRWKAGLVKTGHYSVYVRCDVLV-GVKRGLVGQVPLLG 218

Query: 204 STPCEVD 209
           S  C+VD
Sbjct: 219 SPACKVD 224

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BLAST of HG10005188 vs. NCBI nr
Match: XP_008437747.1 (PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo] >KAA0048793.1 NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa] >TYK20746.1 NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa])

HSP 1 Score: 178.3 bits (451), Expect = 6.7e-41
Identity = 104/208 (50.00%), Postives = 138/208 (66.35%), Query Frame = 0


Query: 3   RSEQERNQNHNLNNRTHKVIVHGSMHKYIPILFFVIVVVALALWLAYRPKNPEFAVVRAT 62
           R  +E       ++R +      S+   I I   +I VVAL LWL YRP +P+F VV A 
Sbjct: 15  RDLKEEKNRARFSHRYYSKSTRRSVCACISIFLLIIGVVALTLWLVYRPIDPQFTVVGAA 74

Query: 63  INKLIVSPPLQLSTIMEFTIITRNPNKHVSIYYDELVGMVLYKDEHITPQVMLSPLMNEK 122
           I  L +S    LST M+FTI+TRNPN+ VSIYYD L   V Y+++ IT QV+L PL +EK
Sbjct: 75  IYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTIFVSYRNQQITSQVILPPLAHEK 134

Query: 123 KSTVEISPVLGGGAVAVTKEVANEIV--RSGNGIWVKVVLMGRVKWKFGGIKIGYYEVNV 182
           +STV +SPVLGGGAVAV+ EVAN +V  ++   + ++VVL+GR++WK G +K G Y V V
Sbjct: 135 RSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYAVYV 194

Query: 183 KCDVLMNNSKKGLMGSLPLPHSTPCEVD 209
           KCDVLM   K+GL+G LP+  S PC+VD
Sbjct: 195 KCDVLM-GVKRGLVGQLPMLASPPCKVD 221

[Close]

BLAST of HG10005188 vs. NCBI nr
Match: XP_038899063.1 (NDR1/HIN1-like protein 12 [Benincasa hispida])

HSP 1 Score: 177.9 bits (450), Expect = 8.8e-41
Identity = 102/206 (49.51%), Postives = 140/206 (67.96%), Query Frame = 0


Query: 5   EQERNQNHNLNNRTHKVIVHGSMHKYIPILFFVIVVVALALWLAYRPKNPEFAVVRATIN 64
           ++E+ +    ++R        S+   I I   +I VVAL LWL YRP +P+F VV A I 
Sbjct: 18  KEEKKRARLFSSRYDSKSTRRSVCACISIFLLIIGVVALTLWLVYRPIHPQFTVVGAAIY 77

Query: 65  KLIVSPPLQLSTIMEFTIITRNPNKHVSIYYDELVGMVLYKDEHITPQVMLSPLMNEKKS 124
            L +S    LST M+FTI+TRNPN+ VSIYYD L+  V Y+++ IT QVML PL++EK+S
Sbjct: 78  DLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLIAFVSYRNQQITSQVMLPPLVHEKRS 137

Query: 125 TVEISPVLGGGAVAVTKEVANEIV--RSGNGIWVKVVLMGRVKWKFGGIKIGYYEVNVKC 184
           TV +SPVLGGGAVAV+ EVAN +V  ++   + ++VVL+GR++WK G +K G Y V VKC
Sbjct: 138 TVAMSPVLGGGAVAVSLEVANGLVTDQAIGVLGLRVVLLGRLRWKAGPLKTGRYAVYVKC 197

Query: 185 DVLMNNSKKGLMGSLPLPHSTPCEVD 209
           DVL+   K+GL+G LP+  S  C+VD
Sbjct: 198 DVLV-GVKRGLVGQLPMLASPACKVD 222

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BLAST of HG10005188 vs. ExPASy Swiss-Prot
Match: Q9SRN0 (NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.2e-12
Identity = 48/165 (29.09%), Postives = 77/165 (46.67%), Query Frame = 0


Query: 31  IPILFFVIVVVALALWLAYRPKNPEFAVVRATINKLIVS--PPLQLSTIMEFTIITRNPN 90
           I  + F+I +  L +W   +P  P F +  AT+    VS  PP  L++  + T+ +RNPN
Sbjct: 22  IIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGNPPNLLTSNFQITLSSRNPN 81

Query: 91  KHVSIYYDELVGMVLYKDEHITPQVMLSPLMNEKKSTVEISPVLGGGAVAVT--KEVANE 150
             + IYYD L     Y+ + IT    + P     K     SP + G +V +     V+ +
Sbjct: 82  NKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIWSPFVYGTSVPIAPFNGVSLD 141

Query: 151 IVRSGNGIWVKVVLMGRVKWKFGGIKIGYYEVNVKCDVLMNNSKK 192
             +    + + +   GRV+WK G    G Y ++VKC   +N   K
Sbjct: 142 TDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAYINFGNK 186

[Close]

BLAST of HG10005188 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.8e-12
Identity = 49/174 (28.16%), Postives = 83/174 (47.70%), Query Frame = 0


Query: 13  NLNNRTHKVIVHGSMHKYIPILFFVIVVVALALWLAYRPKNPEFAVVRATIN--KLIVSP 72
           N+NNR      H  +       F  ++++   +WL   P+ PEF++  A I    L  S 
Sbjct: 19  NINNR------HKKLFFTFSTFFSGLLLIIFLVWLILHPERPEFSLTEADIYSLNLTTSS 78

Query: 73  PLQLSTIMEFTIITRNPNKHVSIYYDELVGMVLYKDEHITPQVMLSPLMNEKKSTVEISP 132
              L++ ++ T+ ++NPNK V IYYD+L+    Y+ + IT +  L P     +    ++ 
Sbjct: 79  THLLNSSVQLTLFSKNPNKKVGIYYDKLLVYAAYRGQQITSEASLPPFYQSHEEINLLTA 138

Query: 133 VLGGGAVAVTKEVANEI--VRSGNGIWVKVVLMGRVKWKFGGIKIGYYEVNVKC 183
            L G  + V +    +I   RS   I + + + G+++WK G    G Y  NV C
Sbjct: 139 FLQGTELPVAQSFGYQISRERSTGKIIIGMKMDGKLRWKIGTWVSGAYRFNVNC 186

[Close]

BLAST of HG10005188 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-10
Identity = 48/182 (26.37%), Postives = 82/182 (45.05%), Query Frame = 0


Query: 40  VVALALWLAYRPKNPEFAVVRATINKLIVSPPLQLSTIMEFTIITRNPNKHVSIYYDELV 99
           + AL +WL +RP   +F V  A + +  + P   L   ++     RNPN+ + +YYDE+ 
Sbjct: 61  IAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYYDEIE 120

Query: 100 GMVLYKDEHITPQVMLSPLMNEKKSTVEISPVL---------GGGAVAVTKEVANEIVRS 159
               Y D+       +S      K+T  +   L         GG    + ++V ++I R 
Sbjct: 121 VRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQIYR- 180

Query: 160 GNGIWVKVVLMGRVKWKFGGIKIGYYEVNVKCDV---LMNNSKKGLMGSLPLPHSTPCEV 210
                +   L  ++++KFG IK   ++  +KCD+   L +NS  G +        T C+V
Sbjct: 181 -----IDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFVF-----QPTKCDV 231

[Close]

BLAST of HG10005188 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 7.8e-08
Identity = 43/151 (28.48%), Postives = 69/151 (45.70%), Query Frame = 0


Query: 37  VIVVVALALWLAYRPKNPEFAVVRATINKLIVSPPLQLSTIMEFTIITRNPNKHVSIYYD 96
           ++ V AL LWL +RP   +F V  A +N+    P   L   ++     RNPN+ V +YYD
Sbjct: 65  ILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFTIRNPNQRVGVYYD 124

Query: 97  ELVGMVLYKDEHITPQVMLSPLMNEKKSTVEISPVLGGGAVAVTKEVANEIV-RSGNGIW 156
           E      Y D+      + S     K +TV ++ + G   V +      ++     +GI+
Sbjct: 125 EFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDGARTDLKDDEKSGIY 184

Query: 157 -VKVVLMGRVKWKFGGIKIGYYEVNVKCDVL 186
            +   L   V++KF  IK    +  +KCD L
Sbjct: 185 RINAKLRLSVRFKFWFIKSWKLKPKIKCDDL 215

[Close]

BLAST of HG10005188 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.0e-07
Identity = 42/161 (26.09%), Postives = 77/161 (47.83%), Query Frame = 0


Query: 29  KYIPILFFVIVVVALALWLAYRPKNPEFAVVRATINKL-IVSPPLQLSTIMEFTIITRNP 88
           K I  L  ++ V AL  WL  RP+  +F V  A++ +    SP   L   +  T+  RNP
Sbjct: 43  KVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNP 102

Query: 89  NKHVSIYYDELVGMVLYKDEHITPQVMLSPLMNEKKSTVEISPVLGGGAVAVTKEVANEI 148
           NK + +YYD +     Y+ +  +  + L+P     K+T  ++P   G  + +     +  
Sbjct: 103 NKRIGLYYDRIEAHAYYEGKRFS-TITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRT 162

Query: 149 VRSG--NGIW-VKVVLMGRVKWKFGGIKIGYYEVNVKCDVL 186
           + +   +G++ +++    RV++K G +K    +  V CD L
Sbjct: 163 LNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDL 202

[Close]

BLAST of HG10005188 vs. ExPASy TrEMBL
Match: A0A0A0KEK5 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G421030 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 7.0e-60
Identity = 128/212 (60.38%), Postives = 163/212 (76.89%), Query Frame = 0


Query: 4   SEQERNQNHNLNNRTHKVIVHGSMHKYIPILFFVIVVVA-LALWLAYRPKNPEFAVVRAT 63
           SE+ R++ HN+N++T+K + +G + KY+ ILF + V++A  ALWLAYRPKNPEF+VV A 
Sbjct: 4   SEECRDEEHNVNSKTNK-LQYGFICKYVTILFVLAVIMASCALWLAYRPKNPEFSVVEAV 63

Query: 64  INKLIVSPPLQLSTIMEFTIITRNPNKHVSIYYDELVGMVLYKDEHITPQVMLSPLMNEK 123
           I  L VSPP QL T M  TI+TRNPNK  SIYYD+L G+VLYKD+ ITPQVMLSP++NEK
Sbjct: 64  IYNLTVSPPSQLLTTMACTIVTRNPNKLSSIYYDQLTGVVLYKDQQITPQVMLSPVINEK 123

Query: 124 KSTVEISPVLGG---GAVAVTKEVANEIVRSGNG--IWVKVVLMGRVKWKFGGIKIGYYE 183
           K+TVEI   + G    AV+VT+E+ANEIVRS      W++VVLMGRVKWK GG++IGYY 
Sbjct: 124 KTTVEIPLKISGAAVSAVSVTEELANEIVRSTESGLFWLRVVLMGRVKWKLGGVRIGYYA 183

Query: 184 VNVKCDVLMNNSKKGLMGSLPLPHSTPCEVDF 210
           ++VKCDVL+ N+K   +GSLP P ST C VDF
Sbjct: 184 LSVKCDVLVTNTKDDSVGSLPSPRSTTCNVDF 214

[Close]

BLAST of HG10005188 vs. ExPASy TrEMBL
Match: A0A6J1CWG5 (NDR1/HIN1-like protein 12 OS=Momordica charantia OX=3673 GN=LOC111015429 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 2.5e-41
Identity = 98/187 (52.41%), Postives = 129/187 (68.98%), Query Frame = 0


Query: 24  HGSMHKYIPILFFVIVVVALALWLAYRPKNPEFAVVRATINKLIVSPPLQLSTIMEFTII 83
           H S+   I I   +I VVAL LWL YRP +P+F VV A I  L +S P  LST M+FTII
Sbjct: 39  HRSVCACISIFLLMIGVVALILWLVYRPTDPQFTVVSAAIYDLNMSSPPLLSTTMQFTII 98

Query: 84  TRNPNKHVSIYYDELVGMVLYKDEHITPQVMLSPLMNEKKSTVEISPVLGGGAVAVTKEV 143
           TRNPN+ VSIYYD L   V Y+++ IT QVML PL +EK+ST+ +SPVLGGGAV  + EV
Sbjct: 99  TRNPNRRVSIYYDRLTAFVSYRNQQITSQVMLPPLFHEKRSTLAMSPVLGGGAVPTSLEV 158

Query: 144 ANEIV--RSGNGIWVKVVLMGRVKWKFGGIKIGYYEVNVKCDVLMNNSKKGLMGSLPLPH 203
            N +V  ++   I ++V L+GR++WK G +K G+Y V V+CDVL+   K+GL+G +PL  
Sbjct: 159 VNGLVTDQTIGVIGLRVALLGRIRWKAGLVKTGHYSVYVRCDVLV-GVKRGLVGQVPLLG 218

Query: 204 STPCEVD 209
           S  C+VD
Sbjct: 219 SPACKVD 224

[Close]

BLAST of HG10005188 vs. ExPASy TrEMBL
Match: A0A5D3DAX9 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00030 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 3.3e-41
Identity = 104/208 (50.00%), Postives = 138/208 (66.35%), Query Frame = 0


Query: 3   RSEQERNQNHNLNNRTHKVIVHGSMHKYIPILFFVIVVVALALWLAYRPKNPEFAVVRAT 62
           R  +E       ++R +      S+   I I   +I VVAL LWL YRP +P+F VV A 
Sbjct: 15  RDLKEEKNRARFSHRYYSKSTRRSVCACISIFLLIIGVVALTLWLVYRPIDPQFTVVGAA 74

Query: 63  INKLIVSPPLQLSTIMEFTIITRNPNKHVSIYYDELVGMVLYKDEHITPQVMLSPLMNEK 122
           I  L +S    LST M+FTI+TRNPN+ VSIYYD L   V Y+++ IT QV+L PL +EK
Sbjct: 75  IYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTIFVSYRNQQITSQVILPPLAHEK 134

Query: 123 KSTVEISPVLGGGAVAVTKEVANEIV--RSGNGIWVKVVLMGRVKWKFGGIKIGYYEVNV 182
           +STV +SPVLGGGAVAV+ EVAN +V  ++   + ++VVL+GR++WK G +K G Y V V
Sbjct: 135 RSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYAVYV 194

Query: 183 KCDVLMNNSKKGLMGSLPLPHSTPCEVD 209
           KCDVLM   K+GL+G LP+  S PC+VD
Sbjct: 195 KCDVLM-GVKRGLVGQLPMLASPPCKVD 221

[Close]

BLAST of HG10005188 vs. ExPASy TrEMBL
Match: A0A1S3AVC7 (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103483090 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 3.3e-41
Identity = 104/208 (50.00%), Postives = 138/208 (66.35%), Query Frame = 0


Query: 3   RSEQERNQNHNLNNRTHKVIVHGSMHKYIPILFFVIVVVALALWLAYRPKNPEFAVVRAT 62
           R  +E       ++R +      S+   I I   +I VVAL LWL YRP +P+F VV A 
Sbjct: 15  RDLKEEKNRARFSHRYYSKSTRRSVCACISIFLLIIGVVALTLWLVYRPIDPQFTVVGAA 74

Query: 63  INKLIVSPPLQLSTIMEFTIITRNPNKHVSIYYDELVGMVLYKDEHITPQVMLSPLMNEK 122
           I  L +S    LST M+FTI+TRNPN+ VSIYYD L   V Y+++ IT QV+L PL +EK
Sbjct: 75  IYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTIFVSYRNQQITSQVILPPLAHEK 134

Query: 123 KSTVEISPVLGGGAVAVTKEVANEIV--RSGNGIWVKVVLMGRVKWKFGGIKIGYYEVNV 182
           +STV +SPVLGGGAVAV+ EVAN +V  ++   + ++VVL+GR++WK G +K G Y V V
Sbjct: 135 RSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYAVYV 194

Query: 183 KCDVLMNNSKKGLMGSLPLPHSTPCEVD 209
           KCDVLM   K+GL+G LP+  S PC+VD
Sbjct: 195 KCDVLM-GVKRGLVGQLPMLASPPCKVD 221

[Close]

BLAST of HG10005188 vs. ExPASy TrEMBL
Match: A0A0A0L882 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116630 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 7.3e-41
Identity = 103/205 (50.24%), Postives = 137/205 (66.83%), Query Frame = 0


Query: 6   QERNQNHNLNNRTHKVIVHGSMHKYIPILFFVIVVVALALWLAYRPKNPEFAVVRATINK 65
           +E       ++R +      S+   I I   VI VVAL LWL YRP +P+F VV A I  
Sbjct: 18  KEEKNRARFSSRYYSKRTRRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYD 77

Query: 66  LIVSPPLQLSTIMEFTIITRNPNKHVSIYYDELVGMVLYKDEHITPQVMLSPLMNEKKST 125
           L +S    LST M+FTI+TRNPN+ VSIYYD L   V Y+++ IT QV+L PL +EK+ST
Sbjct: 78  LNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRST 137

Query: 126 VEISPVLGGGAVAVTKEVANEIV--RSGNGIWVKVVLMGRVKWKFGGIKIGYYEVNVKCD 185
           V +SPVLGGGAVAV+ EVAN +V  ++   + ++VVL+GR++WK G +K G Y V VKCD
Sbjct: 138 VAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCD 197

Query: 186 VLMNNSKKGLMGSLPLPHSTPCEVD 209
           VL+   K+GL+G LP+  S PC+VD
Sbjct: 198 VLV-GVKRGLVGQLPMLASPPCKVD 221

[Close]

BLAST of HG10005188 vs. TAIR 10
Match: AT4G01410.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 131.3 bits (329), Expect = 8.8e-31
Identity = 72/177 (40.68%), Postives = 107/177 (60.45%), Query Frame = 0


Query: 34  LFFVIVVVALALWLAYRPKNPEFAVVRATINKLIVSPPLQLSTIMEFTIITRNPNKHVSI 93
           +  ++ ++AL LWL YRP  P   VV A I  L  + P  +ST ++F+++ RNPN+ VSI
Sbjct: 51  ILVILGIIALILWLVYRPHKPRLTVVGAAIYDLNFTAPPLISTSVQFSVLARNPNRRVSI 110

Query: 94  YYDELVGMVLYKDEHITPQVMLSPLMNEKKSTVEISPVLGGGAVAVTKEVANEIV--RSG 153
           +YD+L   V YKD+ ITP + L PL    KSTV I+PV+GG  + V+ EVAN +    + 
Sbjct: 111 HYDKLSMYVTYKDQIITPPLPLPPLRLGHKSTVVIAPVMGGNGIPVSPEVANGLKNDEAY 170

Query: 154 NGIWVKVVLMGRVKWKFGGIKIGYYEVNVKCDVLMNNSKKGLMGSLPLPHSTPCEVD 209
             + ++VV+ GR++WK G IK G Y    +CDV +  +     G +PL   + C+VD
Sbjct: 171 GVVLMRVVIFGRLRWKAGAIKTGRYGFYARCDVWLRFNPSS-NGQVPLLAPSTCKVD 226

[Close]

BLAST of HG10005188 vs. TAIR 10
Match: AT5G06330.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 84.7 bits (208), Expect = 9.4e-17
Identity = 58/162 (35.80%), Postives = 86/162 (53.09%), Query Frame = 0


Query: 31  IPILFFVIVVVALALWLAYRPKNPEFAVVRATINKLIVS--PPLQLSTIMEFTIITRNPN 90
           I I+  +I+VV L +W   +P  P F +  AT+    VS  PP  L++  +FT+ +RNPN
Sbjct: 24  ISIILLLILVVILLVWAILQPSKPRFVLQDATVFNFNVSGNPPNLLTSNFQFTLSSRNPN 83

Query: 91  KHVSIYYDELVGMVLYKDEHIT-PQVMLSPLMNEKKSTVEISPVLGGGAVAVTKEVANEI 150
             + IYYD L     Y+ + IT P  ML+     K+  V  SP +GG +V V    A  +
Sbjct: 84  DKIGIYYDRLDVYASYRSQQITLPSPMLTTYQGHKEVNV-WSPFVGGYSVPVAPYNAFYL 143

Query: 151 VR--SGNGIWVKVVLMGRVKWKFGGIKIGYYEVNVKCDVLMN 188
            +  S   I + + L GRV+WK G    G Y ++V+C  L+N
Sbjct: 144 DQDHSSGAIMLMLHLDGRVRWKVGSFITGKYHLHVRCHALIN 184

[Close]

BLAST of HG10005188 vs. TAIR 10
Match: AT2G35970.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 78.2 bits (191), Expect = 8.8e-15
Identity = 51/169 (30.18%), Postives = 85/169 (50.30%), Query Frame = 0


Query: 25  GSMHKYIPILFFVIVVVALALWLAYRPKNPEFAVVRATINKLIVSPPLQLSTIMEFTIIT 84
           G++  +I I+   I +V++ L    +PK PEF +   T+    +S P  L++  + TI +
Sbjct: 24  GAIIGFIIIVLMTIFLVSIIL----QPKKPEFILQDTTVYAFNLSQPNLLTSKFQITIAS 83

Query: 85  RNPNKHVSIYYDELVGMVLYKDEHITPQVMLSPLMNEKKSTVEISPVLGGGAVAVT--KE 144
           RN N ++ IYYD L     Y+++ IT    L P     K     SP+L G  V +     
Sbjct: 84  RNRNSNIGIYYDHLHAYASYRNQQITLASDLPPTYQRHKENSVWSPLLYGNQVPIAPFNA 143

Query: 145 VANEIVRSGNGIWVKVVLMGRVKWKFGGIKIGYYEVNVKCDVLMNNSKK 192
           VA    ++     + + + GRV+WK G + IG Y ++V+C   +N + K
Sbjct: 144 VALGDEQNSGVFTLTICVDGRVRWKVGTLTIGNYHLHVRCQAFINQADK 188

[Close]

BLAST of HG10005188 vs. TAIR 10
Match: AT3G52470.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 73.6 bits (179), Expect = 2.2e-13
Identity = 49/162 (30.25%), Postives = 77/162 (47.53%), Query Frame = 0


Query: 33  ILFFVIVVVALAL-WLAYRPKNPEFAVVRATINKLIVSPPLQLSTIMEFTIITRNPNKHV 92
           I F VIV++ + L W+  RP  P F +  AT+    +S P  L++  + TI +RNPN  +
Sbjct: 24  IAFIVIVLITIFLVWVILRPTKPRFVLQDATVYAFNLSQPNLLTSNFQVTIASRNPNSKI 83

Query: 93  SIYYDELVGMVLYKDEHITPQVMLSPLMNEKKSTVEISPVLGGGAVAVT--KEVANEIVR 152
            IYYD L     Y ++ IT +  + P     K     SP + G AV +     VA    +
Sbjct: 84  GIYYDRLHVYATYMNQQITLRTAIPPTYQGHKEVNVWSPFVYGTAVPIAPYNSVALGEEK 143

Query: 153 SGNGIWVKVVLMGRVKWKFGGIKIGYYEVNVKCDVLMNNSKK 192
               + + +   G V+WK   +  G Y ++V+C   +N   K
Sbjct: 144 DRGFVGLMIRADGTVRWKVRTLITGKYHIHVRCQAFINLGNK 185

[Close]

BLAST of HG10005188 vs. TAIR 10
Match: AT3G11660.1 (NDR1/HIN1-like 1 )

HSP 1 Score: 72.8 bits (177), Expect = 3.7e-13
Identity = 48/165 (29.09%), Postives = 77/165 (46.67%), Query Frame = 0


Query: 31  IPILFFVIVVVALALWLAYRPKNPEFAVVRATINKLIVS--PPLQLSTIMEFTIITRNPN 90
           I  + F+I +  L +W   +P  P F +  AT+    VS  PP  L++  + T+ +RNPN
Sbjct: 22  IIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGNPPNLLTSNFQITLSSRNPN 81

Query: 91  KHVSIYYDELVGMVLYKDEHITPQVMLSPLMNEKKSTVEISPVLGGGAVAVT--KEVANE 150
             + IYYD L     Y+ + IT    + P     K     SP + G +V +     V+ +
Sbjct: 82  NKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIWSPFVYGTSVPIAPFNGVSLD 141

Query: 151 IVRSGNGIWVKVVLMGRVKWKFGGIKIGYYEVNVKCDVLMNNSKK 192
             +    + + +   GRV+WK G    G Y ++VKC   +N   K
Sbjct: 142 TDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAYINFGNK 186

The following BLAST results are available for this feature:

BLAST of HG10005188 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN47958.1	1.4e-59	60.38	hypothetical protein Csa_003254 [Cucumis sativus]	[more]
XP_004140243.1	2.6e-53	64.00	NDR1/HIN1-like protein 26 [Cucumis sativus]	[more]
XP_022146145.1	5.2e-41	52.41	NDR1/HIN1-like protein 12 [Momordica charantia]	[more]
XP_008437747.1	6.7e-41	50.00	PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo] >KAA0048793.1 NDR1/HIN1-like...	[more]
XP_038899063.1	8.8e-41	49.51	NDR1/HIN1-like protein 12 [Benincasa hispida]	[more]

BLAST of HG10005188 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRN0	5.2e-12	29.09	NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1	[more]
Q9FI03	6.8e-12	28.16	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]
Q9FNH6	1.3e-10	26.37	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
Q9SRN1	7.8e-08	28.48	NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1	[more]
Q9SJ52	3.0e-07	26.09	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]

BLAST of HG10005188 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEK5	7.0e-60	60.38	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G421030 PE=4 ...	[more]
A0A6J1CWG5	2.5e-41	52.41	NDR1/HIN1-like protein 12 OS=Momordica charantia OX=3673 GN=LOC111015429 PE=4 SV...	[more]
A0A5D3DAX9	3.3e-41	50.00	NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3AVC7	3.3e-41	50.00	NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103483090 PE=4 SV=1	[more]
A0A0A0L882	7.3e-41	50.24	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116630 PE=4 ...	[more]

BLAST of HG10005188 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01410.1	8.8e-31	40.68	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G06330.1	9.4e-17	35.80	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G35970.1	8.8e-15	30.18	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G52470.1	2.2e-13	30.25	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G11660.1	3.7e-13	29.09	NDR1/HIN1-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31415:SF62	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 31..208
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 31..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005188.1	HG10005188.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0009506	plasmodesma