HG10005124 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005124
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	homeobox protein knotted-1-like 6
Location	Chr08: 23002941 .. 23004237 (-)
RNA-Seq Expression	HG10005124
Synteny	HG10005124

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAGAATACGTACGGCATGCGTTCCAATTCCACTTCCACTTCCCAATTCTCGCCTAAGTCCTTCATTTCATCTGACAATCCTATCCTTCCCCTCCATTACCACACCTTGCTTTCCTCCACCAACTTCCGCGATCGGATTCCTATGTTCGGATCCCATGAATTGCTTTCCCCTACTTCCGCCATATCCCAACCCGAACTACCTTCCACTACTTCAGATTTTCCGCTCGGACAGGATCTTCTCAGCCTCACCAAGGCCAAAATTGTCTCTCATCCTACCTATCCTCGTTTGCTTCAAGCTTATATTGACTGCCAGAAGGTGATCCAAACCGTCTTTTTCTTTGCTTTGCTCTCTCACTAACTTTAATTTGCGTTGCGTCCAACTATTGGTTTACTACCGCTCAAATTCCTTCCCCTTTTGATTTTCAAATTCAGACTCGTGTGAAATATAATTGTCGATTGTTTCAAGACCATTCACAAACGACGCTTAACTGTTTTGCGATTACCCATTTTTTACAGTCTTCCTTTTGGTTTTCCAAGAACTGAGACTTCTTTCCCGAAGAAGAAAGGAAGATGGAAAAAAAGTGGTGGCGTCTGACAATTTCTTGCTCAACTTGAAACTGAAAGTAGAAATTGCTATAGTTTTTTTTTTTTTTTTTTCTTTTTTGTTCACTTTTACTATCAATCAACCCTAGAAATTAAATAATCATCAGTAGGTCTGATTTTCACTGCAATTCTACTGGAAACTTGGATGATTTAACCAAAAGGTTTTCTGATGTGCCGTAAAGTAAGCCGGCTACAAAATGAATTTAATTATTTTATTTTGGGGTCAGGTTGGAGCCCCTCCGGAGATAGCTTGCTTGTTGGAGGAAATCCGGCGAGAAAACGACAGTCATAAACAAAACGCCATCTCCACGTGCTTTGGAGCTGATCCCGAGCTCGATGAGTTCATGGTAATGGTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTTCACTCGCCCACAAGCAAATTAAACTTCGTGCTTCTAACCAATTTGGCCATGGTGCCTTTCTATTTAGTGTAACTGAAAACTCTAATATATTGTCTCTCTCCGGATAGGAAGCGTACTGTGACATGCTGGTCAAGTATAAATCAGATCTCTCAAGGCCCTTTCATGAAGCTTCTTCCTTCTTGAATAACATTCAACTGCAACTTAGCAACCTCTGTGCTGGTGCTTTCACCAGAAGCCCTTCCAGTCAGTCTCTCTCCCTTTCTATCAGTAATTGCTTCTTTTCGCACTCTATTTCCACTTAA

mRNA sequence

ATGGCGGAGAATACGTACGGCATGCGTTCCAATTCCACTTCCACTTCCCAATTCTCGCCTAAGTCCTTCATTTCATCTGACAATCCTATCCTTCCCCTCCATTACCACACCTTGCTTTCCTCCACCAACTTCCGCGATCGGATTCCTATGTTCGGATCCCATGAATTGCTTTCCCCTACTTCCGCCATATCCCAACCCGAACTACCTTCCACTACTTCAGATTTTCCGCTCGGACAGGATCTTCTCAGCCTCACCAAGGCCAAAATTGTCTCTCATCCTACCTATCCTCGTTTGCTTCAAGCTTATATTGACTGCCAGAAGGTTGGAGCCCCTCCGGAGATAGCTTGCTTGTTGGAGGAAATCCGGCGAGAAAACGACAGTCATAAACAAAACGCCATCTCCACGTGCTTTGGAGCTGATCCCGAGCTCGATGAGTTCATGGAAGCGTACTGTGACATGCTGGTCAAGTATAAATCAGATCTCTCAAGGCCCTTTCATGAAGCTTCTTCCTTCTTGAATAACATTCAACTGCAACTTAGCAACCTCTGTGCTGGTGCTTTCACCAGAAGCCCTTCCAGTCAGTCTCTCTCCCTTTCTATCAGTAATTGCTTCTTTTCGCACTCTATTTCCACTTAA

Coding sequence (CDS)

ATGGCGGAGAATACGTACGGCATGCGTTCCAATTCCACTTCCACTTCCCAATTCTCGCCTAAGTCCTTCATTTCATCTGACAATCCTATCCTTCCCCTCCATTACCACACCTTGCTTTCCTCCACCAACTTCCGCGATCGGATTCCTATGTTCGGATCCCATGAATTGCTTTCCCCTACTTCCGCCATATCCCAACCCGAACTACCTTCCACTACTTCAGATTTTCCGCTCGGACAGGATCTTCTCAGCCTCACCAAGGCCAAAATTGTCTCTCATCCTACCTATCCTCGTTTGCTTCAAGCTTATATTGACTGCCAGAAGGTTGGAGCCCCTCCGGAGATAGCTTGCTTGTTGGAGGAAATCCGGCGAGAAAACGACAGTCATAAACAAAACGCCATCTCCACGTGCTTTGGAGCTGATCCCGAGCTCGATGAGTTCATGGAAGCGTACTGTGACATGCTGGTCAAGTATAAATCAGATCTCTCAAGGCCCTTTCATGAAGCTTCTTCCTTCTTGAATAACATTCAACTGCAACTTAGCAACCTCTGTGCTGGTGCTTTCACCAGAAGCCCTTCCAGTCAGTCTCTCTCCCTTTCTATCAGTAATTGCTTCTTTTCGCACTCTATTTCCACTTAA

Protein sequence

MAENTYGMRSNSTSTSQFSPKSFISSDNPILPLHYHTLLSSTNFRDRIPMFGSHELLSPTSAISQPELPSTTSDFPLGQDLLSLTKAKIVSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNNIQLQLSNLCAGAFTRSPSSQSLSLSISNCFFSHSIST

Homology

[Close]

BLAST of HG10005124 vs. NCBI nr
Match: XP_038885812.1 (homeobox protein knotted-1-like 6 [Benincasa hispida])

HSP 1 Score: 285.4 bits (729), Expect = 3.9e-73
Identity = 144/173 (83.24%), Postives = 154/173 (89.02%), Query Frame = 0


Query: 24  ISSDNPILPLHYHTLLSSTNFRDRIPMFGSHELLSPTSAISQPELPSTTSDFPLGQD--L 83
           +SS    LPL Y TLLSS+NFRDRIPMFGS EL+S TSAIS+ E PSTT DFPL +D  +
Sbjct: 29  LSSKFLXLPLDYQTLLSSSNFRDRIPMFGSDELVSSTSAISEAEAPSTTPDFPLPEDVHV 88

Query: 84  LSLTKAKIVSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADP 143
           LSLTKAKI+SHP YPRLL AYIDCQKVGAPPEIACLLEEIRRENDSHKQN I+TCFGADP
Sbjct: 89  LSLTKAKILSHPAYPRLLHAYIDCQKVGAPPEIACLLEEIRRENDSHKQNGITTCFGADP 148

Query: 144 ELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNNIQLQLSNLCAGAFTRSPSSQ 195
           ELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNNIQLQL NLCAGA TRSPS++
Sbjct: 149 ELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNNIQLQLCNLCAGASTRSPSNE 201

[Close]

BLAST of HG10005124 vs. NCBI nr
Match: XP_023546842.1 (homeobox protein knotted-1-like 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 284.6 bits (727), Expect = 6.7e-73
Identity = 147/196 (75.00%), Postives = 160/196 (81.63%), Query Frame = 0


Query: 1   MAENTYGMRSNSTSTSQFSPKSFISSDNPILPLHYHTLLSSTNF--RDRIPMFGSHELLS 60
           M EN YGMR    ST QFSPKSF+    PILPL Y T L STN+  RDRIP+FGS ELL 
Sbjct: 1   MGENMYGMR----STPQFSPKSFLPPHTPILPLDYQTFLPSTNYFPRDRIPVFGSDELL- 60

Query: 61  PTSAISQPELPSTTSDFPLGQDLLSLTKAKIVSHPTYPRLLQAYIDCQKVGAPPEIACLL 120
                S+PE PS T DFPL QD+ S+ KA+I+SHPTYPRLL AYIDC KVGAPPEIACLL
Sbjct: 61  -----SEPEPPSITPDFPLAQDVPSVIKAQILSHPTYPRLLHAYIDCHKVGAPPEIACLL 120

Query: 121 EEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNNIQLQ 180
           EEIRRENDSHKQNA+STCFG DPELDEFME YCDMLVKYKSDLSRPFHEASSFL+NI+LQ
Sbjct: 121 EEIRRENDSHKQNAMSTCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSNIELQ 180

Query: 181 LSNLCAGAFTRSPSSQ 195
           LSNLCAGA TRS S++
Sbjct: 181 LSNLCAGASTRSSSNE 186

[Close]

BLAST of HG10005124 vs. NCBI nr
Match: XP_022997562.1 (homeobox protein knotted-1-like 6 [Cucurbita maxima])

HSP 1 Score: 284.3 bits (726), Expect = 8.8e-73
Identity = 148/196 (75.51%), Postives = 160/196 (81.63%), Query Frame = 0


Query: 1   MAENTYGMRSNSTSTSQFSPKSFISSDNPILPLHYHTLLSSTNF--RDRIPMFGSHELLS 60
           M EN YGMR    ST QFSPKSF+S   PILPL Y T L STN+  RDRIP+FGS ELL 
Sbjct: 1   MGENMYGMR----STPQFSPKSFLSPHTPILPLDYQTFLPSTNYFPRDRIPVFGSDELL- 60

Query: 61  PTSAISQPELPSTTSDFPLGQDLLSLTKAKIVSHPTYPRLLQAYIDCQKVGAPPEIACLL 120
                S+ E PS T DFPL QD+ +L KAKI+SHPTYPRLL AYIDC KVGAPPEIACLL
Sbjct: 61  -----SEAEPPSITPDFPLAQDVPTLIKAKILSHPTYPRLLHAYIDCHKVGAPPEIACLL 120

Query: 121 EEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNNIQLQ 180
           EEIRRENDSHKQNAISTCFG DPELDEFME YCDMLVKYKSDLSRPFHEASSFL++I+LQ
Sbjct: 121 EEIRRENDSHKQNAISTCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSDIELQ 180

Query: 181 LSNLCAGAFTRSPSSQ 195
           LSNLCAGA TRS S++
Sbjct: 181 LSNLCAGASTRSSSNE 186

[Close]

BLAST of HG10005124 vs. NCBI nr
Match: XP_008444355.1 (PREDICTED: homeobox protein knotted-1-like 6 [Cucumis melo])

HSP 1 Score: 282.0 bits (720), Expect = 4.4e-72
Identity = 151/197 (76.65%), Postives = 163/197 (82.74%), Query Frame = 0


Query: 1   MAENTYGMRSNSTSTSQFSPKSFISSDNPILPLHYHTLLSSTNF-RDRIPMFGSHELLS- 60
           M EN YGM           PKSF+ SDN ILPL Y TLL STN  RDRIPMFGSHEL+S 
Sbjct: 1   MDENMYGM-----------PKSFLPSDNLILPLDYQTLLPSTNLRRDRIPMFGSHELVSR 60

Query: 61  PTSAISQPELPSTTSDFPL-GQDLLSLTKAKIVSHPTYPRLLQAYIDCQKVGAPPEIACL 120
           PTS++SQ E PSTT DF L  +D+LS+TKAKIVSHP YPRLL AYIDCQKVGAPPEIACL
Sbjct: 61  PTSSMSQAEPPSTTLDFSLPEEDVLSVTKAKIVSHPIYPRLLHAYIDCQKVGAPPEIACL 120

Query: 121 LEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNNIQL 180
           LEEIRRENDSH+QNAISTCFGADPELDEFMEAYCDML+KYKSDLSRPFHEA SFLNNIQL
Sbjct: 121 LEEIRRENDSHEQNAISTCFGADPELDEFMEAYCDMLMKYKSDLSRPFHEAFSFLNNIQL 180

Query: 181 QLSNLCAGAFTRSPSSQ 195
           QL NL AGA T +PS++
Sbjct: 181 QLCNLGAGASTTTPSNE 186

[Close]

BLAST of HG10005124 vs. NCBI nr
Match: KAG6598232.1 (Homeobox protein knotted-1-like 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 281.6 bits (719), Expect = 5.7e-72
Identity = 147/196 (75.00%), Postives = 158/196 (80.61%), Query Frame = 0


Query: 1   MAENTYGMRSNSTSTSQFSPKSFISSDNPILPLHYHTLLSSTNF--RDRIPMFGSHELLS 60
           M ENTYGMR    ST QFSP SF+S   PILPL Y   L STN+  RDRIP+FGS ELL 
Sbjct: 1   MGENTYGMR----STPQFSPNSFLSPHTPILPLDYQAFLPSTNYFPRDRIPVFGSDELL- 60

Query: 61  PTSAISQPELPSTTSDFPLGQDLLSLTKAKIVSHPTYPRLLQAYIDCQKVGAPPEIACLL 120
                S+ E  S T DFPL QD+ SL KAKI+SHPTYPRLL AYIDC KVGAPPEIACLL
Sbjct: 61  -----SEAEPTSITPDFPLAQDVPSLIKAKILSHPTYPRLLHAYIDCHKVGAPPEIACLL 120

Query: 121 EEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNNIQLQ 180
           EEIRRENDSHKQNA+STCFG DPELDEFME YCDMLVKYKSDLSRPFHEASSFL+NI+LQ
Sbjct: 121 EEIRRENDSHKQNAMSTCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSNIELQ 180

Query: 181 LSNLCAGAFTRSPSSQ 195
           LSNLCAGA TRS S++
Sbjct: 181 LSNLCAGASTRSSSNE 186

[Close]

BLAST of HG10005124 vs. ExPASy Swiss-Prot
Match: Q84JS6 (Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana OX=3702 GN=KNAT6 PE=1 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.5e-46
Identity = 103/181 (56.91%), Postives = 126/181 (69.61%), Query Frame = 0


Query: 11  NSTSTSQFSPKS--FISSDNPILPLHYHTLLSSTNFRDRI-PMFGSHELLSPTSAISQPE 70
           N  S   +S KS   +S ++ + P  Y  LL S+   +R+  +FGS ELLS   +    E
Sbjct: 6   NFHSAGDYSDKSVLMMSPESLMFPSDYQALLCSSAGENRVSDVFGSDELLSVAVSALSSE 65

Query: 71  LPSTTSDFPLGQDLLSLT--KAKIVSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRREN 130
             S   +     D +SLT  KAKI  HP+YPRLLQAYIDCQKVGAPPEIACLLEEI+RE+
Sbjct: 66  AASIAPEIRRNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLEEIQRES 125

Query: 131 DSHKQNAI-STCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNNIQLQLSNLCA 186
           D +KQ  + S+CFGADPELDEFME YCD+LVKYKSDL+RPF EA+ FLN I++QL NLC 
Sbjct: 126 DVYKQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCT 185

[Close]

BLAST of HG10005124 vs. ExPASy Swiss-Prot
Match: P46640 (Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana OX=3702 GN=KNAT2 PE=1 SV=3)

HSP 1 Score: 171.0 bits (432), Expect = 1.4e-41
Identity = 94/187 (50.27%), Postives = 126/187 (67.38%), Query Frame = 0


Query: 14  STSQFSPKSFISSDNPILPLHYHTLLSSTNFRDRIPMFGSHELLSPTSAISQPELPSTTS 73
           ST  +S K+ +     ++P  Y +L+ ST   D   +FGS EL +  S+   P +     
Sbjct: 9   STEDYSEKATL-----MMPSDYQSLICSTT-GDNQRLFGSDELATALSSELLPRIRKAED 68

Query: 74  DFPLGQDLLSLTKAKIVSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQN-A 133
           +F      LS+ K+KI SHP YPRLLQ YIDCQKVGAP EIAC+LEEI+REN  +K++ A
Sbjct: 69  NFS-----LSVIKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVYKRDVA 128

Query: 134 ISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNNIQLQLSNLCAGAFTRSPS 193
             +CFGADPELDEFME YCD+LVKYK+DL+RPF EA++F+N I++QL NLC G  + +  
Sbjct: 129 PLSCFGADPELDEFMETYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCTGPASATAL 184

Query: 194 SQSLSLS 200
           S   ++S
Sbjct: 189 SDDGAVS 184

[Close]

BLAST of HG10005124 vs. ExPASy Swiss-Prot
Match: Q9FP29 (Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=OSH6 PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.3e-31
Identity = 67/107 (62.62%), Postives = 81/107 (75.70%), Query Frame = 0


Query: 80  DLLSLTKAKIVSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGA 139
           DL  L KA+I  HP YP LL AYI+C+KVGAPPE+A LL+EI RE  +      +   G 
Sbjct: 38  DLTELMKAQIAGHPRYPTLLSAYIECRKVGAPPEVASLLKEIGRERRAGGGGGGAGQIGV 97

Query: 140 DPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNNIQLQLSNLCAGA 187
           DPELDEFMEAYC +LV+YK +LSRPF EA+SFL++IQ QLSNLC+GA
Sbjct: 98  DPELDEFMEAYCRVLVRYKEELSRPFDEAASFLSSIQTQLSNLCSGA 144

[Close]

BLAST of HG10005124 vs. ExPASy Swiss-Prot
Match: A2Y007 (Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica OX=39946 GN=OSH71 PE=2 SV=2)

HSP 1 Score: 127.1 bits (318), Expect = 2.4e-28
Identity = 67/127 (52.76%), Postives = 83/127 (65.35%), Query Frame = 0


Query: 61  SAISQPELPSTTSDFPLGQDLLSLTKAKIVSHPTYPRLLQAYIDCQKVGAPPEIACLLEE 120
           S+   P  P+TT+      DL  L KA+I  HP+YP LL AYI+C+KVGAPPE+  LLEE
Sbjct: 34  SSPPHPPPPATTA---AAADLTELMKAQIAGHPSYPSLLSAYIECRKVGAPPEVTTLLEE 93

Query: 121 IRRENDSHKQNAISTC-FGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNNIQLQL 180
           I RE       A +    G DPELDEFME YC +L +YK +L+RPF EA+SFL  I  QL
Sbjct: 94  IGREGRGGGGGATAGGEIGLDPELDEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQL 153

Query: 181 SNLCAGA 187
           ++LC GA
Sbjct: 154 ASLCGGA 157

[Close]

BLAST of HG10005124 vs. ExPASy Swiss-Prot
Match: Q7GDL5 (Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. japonica OX=39947 GN=OSH71 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.4e-28
Identity = 67/127 (52.76%), Postives = 83/127 (65.35%), Query Frame = 0


Query: 61  SAISQPELPSTTSDFPLGQDLLSLTKAKIVSHPTYPRLLQAYIDCQKVGAPPEIACLLEE 120
           S+   P  P+TT+      DL  L KA+I  HP+YP LL AYI+C+KVGAPPE+  LLEE
Sbjct: 34  SSPPHPPPPATTA---AAADLTELMKAQIAGHPSYPSLLSAYIECRKVGAPPEVTTLLEE 93

Query: 121 IRRENDSHKQNAISTC-FGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNNIQLQL 180
           I RE       A +    G DPELDEFME YC +L +YK +L+RPF EA+SFL  I  QL
Sbjct: 94  IGREGRGGGGGATAGGEIGLDPELDEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQL 153

Query: 181 SNLCAGA 187
           ++LC GA
Sbjct: 154 ASLCGGA 157

[Close]

BLAST of HG10005124 vs. ExPASy TrEMBL
Match: A0A0A0LQM1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348920 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.9e-73
Identity = 156/205 (76.10%), Postives = 170/205 (82.93%), Query Frame = 0


Query: 1   MAENTYGMRSNSTSTSQFSPKSFISSDNPILPLHYHTLLSSTNF-RDRIPMFGSHELLS- 60
           M +N YGM           PKSF+  DN ILPL Y +LLSS+N+ RD IPMFGSH+LLS 
Sbjct: 1   MEDNMYGM-----------PKSFLPPDNLILPLDYQSLLSSSNYRRDPIPMFGSHQLLSR 60

Query: 61  PTSAISQPELPSTTS-DFPL-GQDLLSLTKAKIVSHPTYPRLLQAYIDCQKVGAPPEIAC 120
           PTSAISQ E PSTT+ DFP+  +DLLS+TKAKIVSHPTYPRLL AYIDCQKVGAPPE+AC
Sbjct: 61  PTSAISQAEPPSTTTPDFPIPREDLLSVTKAKIVSHPTYPRLLHAYIDCQKVGAPPEVAC 120

Query: 121 LLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNNIQ 180
           LLEEIRRENDS +QN ISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEA SFLNNIQ
Sbjct: 121 LLEEIRRENDSQEQNGISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEAFSFLNNIQ 180

Query: 181 LQLSNLCAGAFTRSPSSQSLSLSIS 202
           LQL NL A A T +PSSQSLSLS+S
Sbjct: 181 LQLCNLGAPASTSTPSSQSLSLSLS 194

[Close]

BLAST of HG10005124 vs. ExPASy TrEMBL
Match: A0A6J1K5E4 (homeobox protein knotted-1-like 6 OS=Cucurbita maxima OX=3661 GN=LOC111492452 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 4.3e-73
Identity = 148/196 (75.51%), Postives = 160/196 (81.63%), Query Frame = 0


Query: 1   MAENTYGMRSNSTSTSQFSPKSFISSDNPILPLHYHTLLSSTNF--RDRIPMFGSHELLS 60
           M EN YGMR    ST QFSPKSF+S   PILPL Y T L STN+  RDRIP+FGS ELL 
Sbjct: 1   MGENMYGMR----STPQFSPKSFLSPHTPILPLDYQTFLPSTNYFPRDRIPVFGSDELL- 60

Query: 61  PTSAISQPELPSTTSDFPLGQDLLSLTKAKIVSHPTYPRLLQAYIDCQKVGAPPEIACLL 120
                S+ E PS T DFPL QD+ +L KAKI+SHPTYPRLL AYIDC KVGAPPEIACLL
Sbjct: 61  -----SEAEPPSITPDFPLAQDVPTLIKAKILSHPTYPRLLHAYIDCHKVGAPPEIACLL 120

Query: 121 EEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNNIQLQ 180
           EEIRRENDSHKQNAISTCFG DPELDEFME YCDMLVKYKSDLSRPFHEASSFL++I+LQ
Sbjct: 121 EEIRRENDSHKQNAISTCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSDIELQ 180

Query: 181 LSNLCAGAFTRSPSSQ 195
           LSNLCAGA TRS S++
Sbjct: 181 LSNLCAGASTRSSSNE 186

[Close]

BLAST of HG10005124 vs. ExPASy TrEMBL
Match: A0A1S3BA77 (homeobox protein knotted-1-like 6 OS=Cucumis melo OX=3656 GN=LOC103487707 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 2.1e-72
Identity = 151/197 (76.65%), Postives = 163/197 (82.74%), Query Frame = 0


Query: 1   MAENTYGMRSNSTSTSQFSPKSFISSDNPILPLHYHTLLSSTNF-RDRIPMFGSHELLS- 60
           M EN YGM           PKSF+ SDN ILPL Y TLL STN  RDRIPMFGSHEL+S 
Sbjct: 1   MDENMYGM-----------PKSFLPSDNLILPLDYQTLLPSTNLRRDRIPMFGSHELVSR 60

Query: 61  PTSAISQPELPSTTSDFPL-GQDLLSLTKAKIVSHPTYPRLLQAYIDCQKVGAPPEIACL 120
           PTS++SQ E PSTT DF L  +D+LS+TKAKIVSHP YPRLL AYIDCQKVGAPPEIACL
Sbjct: 61  PTSSMSQAEPPSTTLDFSLPEEDVLSVTKAKIVSHPIYPRLLHAYIDCQKVGAPPEIACL 120

Query: 121 LEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNNIQL 180
           LEEIRRENDSH+QNAISTCFGADPELDEFMEAYCDML+KYKSDLSRPFHEA SFLNNIQL
Sbjct: 121 LEEIRRENDSHEQNAISTCFGADPELDEFMEAYCDMLMKYKSDLSRPFHEAFSFLNNIQL 180

Query: 181 QLSNLCAGAFTRSPSSQ 195
           QL NL AGA T +PS++
Sbjct: 181 QLCNLGAGASTTTPSNE 186

[Close]

BLAST of HG10005124 vs. ExPASy TrEMBL
Match: A0A6J1HD67 (homeobox protein knotted-1-like 6 OS=Cucurbita moschata OX=3662 GN=LOC111462426 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 3.4e-70
Identity = 144/196 (73.47%), Postives = 155/196 (79.08%), Query Frame = 0


Query: 1   MAENTYGMRSNSTSTSQFSPKSFISSDNPILPLHYHTLLSSTNF--RDRIPMFGSHELLS 60
           M ENTYGMR    ST QFSP SF+S   PILPL Y   L STN+  RDRIP FGS ELLS
Sbjct: 1   MGENTYGMR----STPQFSPNSFLSPHTPILPLDYPAFLPSTNYFPRDRIPAFGSDELLS 60

Query: 61  PTSAISQPELPSTTSDFPLGQDLLSLTKAKIVSHPTYPRLLQAYIDCQKVGAPPEIACLL 120
                +     S T DFPL QD+ S+ KAKI+SHPTYPRLL AYIDC KVGAPPEIACLL
Sbjct: 61  DAEPTT-----SITPDFPLAQDVPSVIKAKILSHPTYPRLLHAYIDCHKVGAPPEIACLL 120

Query: 121 EEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNNIQLQ 180
           EEIRRENDSHKQNA+STCFG DPELDEFME YCDMLVKYKSDLSRPF EASSFL+NI+LQ
Sbjct: 121 EEIRRENDSHKQNAMSTCFGGDPELDEFMETYCDMLVKYKSDLSRPFREASSFLSNIELQ 180

Query: 181 LSNLCAGAFTRSPSSQ 195
           LSNLCAGA TRS S++
Sbjct: 181 LSNLCAGASTRSSSNE 187

[Close]

BLAST of HG10005124 vs. ExPASy TrEMBL
Match: A0A6J1BPB0 (homeobox protein knotted-1-like 6 OS=Momordica charantia OX=3673 GN=LOC111004569 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.6e-64
Identity = 135/183 (73.77%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 14  STSQFSPKSFISSDNPILPLHYHTLLSSTNFRDRIPMFGSHELLSPTSAISQPELPSTTS 73
           ST+ +S KSF+S DN    L YH+ LSST+FRDRIP+FGSHEL S  SA+S+ E PS T 
Sbjct: 33  STADYSAKSFLSPDN---LLDYHSFLSSTSFRDRIPIFGSHELPSAASAVSEAEAPSITP 92

Query: 74  DFPLGQDLLSL--TKAKIVSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQN 133
            FPL  D+LS+   KAKIVSHPTYPRLL AYIDCQKVGAPPEIA LLEEIRREN   KQ+
Sbjct: 93  AFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYIDCQKVGAPPEIAGLLEEIRREN---KQH 152

Query: 134 AISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNNIQLQLSNLCAGAFTRSP 193
           AISTCFGADPELDEFME YC+MLVKYKSDLS PF+EASSFLNNI+LQLS+LCAGA  RSP
Sbjct: 153 AISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSP 209

Query: 194 SSQ 195
           S++
Sbjct: 213 SNE 209

[Close]

BLAST of HG10005124 vs. TAIR 10
Match: AT1G23380.1 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 187.6 bits (475), Expect = 1.0e-47
Identity = 103/181 (56.91%), Postives = 126/181 (69.61%), Query Frame = 0


Query: 11  NSTSTSQFSPKS--FISSDNPILPLHYHTLLSSTNFRDRI-PMFGSHELLSPTSAISQPE 70
           N  S   +S KS   +S ++ + P  Y  LL S+   +R+  +FGS ELLS   +    E
Sbjct: 6   NFHSAGDYSDKSVLMMSPESLMFPSDYQALLCSSAGENRVSDVFGSDELLSVAVSALSSE 65

Query: 71  LPSTTSDFPLGQDLLSLT--KAKIVSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRREN 130
             S   +     D +SLT  KAKI  HP+YPRLLQAYIDCQKVGAPPEIACLLEEI+RE+
Sbjct: 66  AASIAPEIRRNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLEEIQRES 125

Query: 131 DSHKQNAI-STCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNNIQLQLSNLCA 186
           D +KQ  + S+CFGADPELDEFME YCD+LVKYKSDL+RPF EA+ FLN I++QL NLC 
Sbjct: 126 DVYKQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCT 185

[Close]

BLAST of HG10005124 vs. TAIR 10
Match: AT1G23380.2 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 182.6 bits (462), Expect = 3.4e-46
Identity = 103/183 (56.28%), Postives = 126/183 (68.85%), Query Frame = 0


Query: 11  NSTSTSQFSPKS--FISSDNPILPLHYHTLLSSTNFRDRI-PMFGSHELLSPTSAISQPE 70
           N  S   +S KS   +S ++ + P  Y  LL S+   +R+  +FGS ELLS   +    E
Sbjct: 6   NFHSAGDYSDKSVLMMSPESLMFPSDYQALLCSSAGENRVSDVFGSDELLSVAVSALSSE 65

Query: 71  LPSTTSDFPLGQDLLSLT--KAKIVSHPTYPRLLQAYIDCQK--VGAPPEIACLLEEIRR 130
             S   +     D +SLT  KAKI  HP+YPRLLQAYIDCQK  VGAPPEIACLLEEI+R
Sbjct: 66  AASIAPEIRRNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKKQVGAPPEIACLLEEIQR 125

Query: 131 ENDSHKQNAI-STCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNNIQLQLSNL 186
           E+D +KQ  + S+CFGADPELDEFME YCD+LVKYKSDL+RPF EA+ FLN I++QL NL
Sbjct: 126 ESDVYKQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNL 185

[Close]

BLAST of HG10005124 vs. TAIR 10
Match: AT1G70510.1 (KNOTTED-like from Arabidopsis thaliana 2 )

HSP 1 Score: 171.0 bits (432), Expect = 1.0e-42
Identity = 94/187 (50.27%), Postives = 126/187 (67.38%), Query Frame = 0


Query: 14  STSQFSPKSFISSDNPILPLHYHTLLSSTNFRDRIPMFGSHELLSPTSAISQPELPSTTS 73
           ST  +S K+ +     ++P  Y +L+ ST   D   +FGS EL +  S+   P +     
Sbjct: 9   STEDYSEKATL-----MMPSDYQSLICSTT-GDNQRLFGSDELATALSSELLPRIRKAED 68

Query: 74  DFPLGQDLLSLTKAKIVSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQN-A 133
           +F      LS+ K+KI SHP YPRLLQ YIDCQKVGAP EIAC+LEEI+REN  +K++ A
Sbjct: 69  NFS-----LSVIKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVYKRDVA 128

Query: 134 ISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNNIQLQLSNLCAGAFTRSPS 193
             +CFGADPELDEFME YCD+LVKYK+DL+RPF EA++F+N I++QL NLC G  + +  
Sbjct: 129 PLSCFGADPELDEFMETYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCTGPASATAL 184

Query: 194 SQSLSLS 200
           S   ++S
Sbjct: 189 SDDGAVS 184

[Close]

BLAST of HG10005124 vs. TAIR 10
Match: AT4G08150.1 (KNOTTED-like from Arabidopsis thaliana )

HSP 1 Score: 112.8 bits (281), Expect = 3.3e-25
Identity = 51/100 (51.00%), Postives = 72/100 (72.00%), Query Frame = 0


Query: 86  KAKIVSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGA--DPEL 145
           KAKI++HP Y  LLQAY+DCQK+GAPP++   +   R++ ++ +Q +  +   +  DPEL
Sbjct: 135 KAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSASSRDPEL 194

Query: 146 DEFMEAYCDMLVKYKSDLSRPFHEASSFLNNIQLQLSNLC 184
           D+FMEAYCDMLVKY+ +L+RP  EA  F+  I+ QLS LC
Sbjct: 195 DQFMEAYCDMLVKYREELTRPIQEAMEFIRRIESQLSMLC 234

[Close]

BLAST of HG10005124 vs. TAIR 10
Match: AT1G62360.1 (KNOX/ELK homeobox transcription factor )

HSP 1 Score: 107.5 bits (267), Expect = 1.4e-23
Identity = 57/111 (51.35%), Postives = 72/111 (64.86%), Query Frame = 0


Query: 86  KAKIVSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAIST-CFGADPELD 145
           KAKI++HP Y RLL AY++CQKVGAPPE+   LEE      +   +   T C G DP LD
Sbjct: 122 KAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAASMGPTGCLGEDPGLD 181

Query: 146 EFMEAYCDMLVKYKSDLSRPFHEASSFLNNIQLQLSNLCAGAFTRSPSSQS 196
           +FMEAYC+MLVKY+ +LS+PF EA  FL  ++ Q  +L       SPSS S
Sbjct: 182 QFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLS----SPSSFS 228

The following BLAST results are available for this feature:

BLAST of HG10005124 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885812.1	3.9e-73	83.24	homeobox protein knotted-1-like 6 [Benincasa hispida]	[more]
XP_023546842.1	6.7e-73	75.00	homeobox protein knotted-1-like 6 [Cucurbita pepo subsp. pepo]	[more]
XP_022997562.1	8.8e-73	75.51	homeobox protein knotted-1-like 6 [Cucurbita maxima]	[more]
XP_008444355.1	4.4e-72	76.65	PREDICTED: homeobox protein knotted-1-like 6 [Cucumis melo]	[more]
KAG6598232.1	5.7e-72	75.00	Homeobox protein knotted-1-like 6, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of HG10005124 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JS6	1.5e-46	56.91	Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana OX=3702 GN=KNAT6 PE=1 ...	[more]
P46640	1.4e-41	50.27	Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana OX=3702 GN=KNAT2 PE=1 ...	[more]
Q9FP29	1.3e-31	62.62	Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=OS...	[more]
A2Y007	2.4e-28	52.76	Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica OX=39946 GN=OSH...	[more]
Q7GDL5	2.4e-28	52.76	Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. japonica OX=39947 GN=O...	[more]

BLAST of HG10005124 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQM1	1.9e-73	76.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348920 PE=4 SV=1	[more]
A0A6J1K5E4	4.3e-73	75.51	homeobox protein knotted-1-like 6 OS=Cucurbita maxima OX=3661 GN=LOC111492452 PE...	[more]
A0A1S3BA77	2.1e-72	76.65	homeobox protein knotted-1-like 6 OS=Cucumis melo OX=3656 GN=LOC103487707 PE=4 S...	[more]
A0A6J1HD67	3.4e-70	73.47	homeobox protein knotted-1-like 6 OS=Cucurbita moschata OX=3662 GN=LOC111462426 ...	[more]
A0A6J1BPB0	1.6e-64	73.77	homeobox protein knotted-1-like 6 OS=Momordica charantia OX=3673 GN=LOC111004569...	[more]

BLAST of HG10005124 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23380.1	1.0e-47	56.91	KNOTTED1-like homeobox gene 6	[more]
AT1G23380.2	3.4e-46	56.28	KNOTTED1-like homeobox gene 6	[more]
AT1G70510.1	1.0e-42	50.27	KNOTTED-like from Arabidopsis thaliana 2	[more]
AT4G08150.1	3.3e-25	51.00	KNOTTED-like from Arabidopsis thaliana	[more]
AT1G62360.1	1.4e-23	51.35	KNOX/ELK homeobox transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005540	KNOX1	SMART	SM01255	KNOX1_2	coord: 83..127 e-value: 1.7E-22 score: 90.7
IPR005540	KNOX1	PFAM	PF03790	KNOX1	coord: 86..126 e-value: 2.2E-22 score: 78.5
IPR005541	KNOX2	SMART	SM01256	KNOX2_2	coord: 133..184 e-value: 3.4E-24 score: 96.4
IPR005541	KNOX2	PFAM	PF03791	KNOX2	coord: 137..183 e-value: 5.7E-24 score: 83.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR11850:SF287	HOMEOBOX PROTEIN KNOTTED-1-LIKE 6	coord: 15..194
None	No IPR available	PANTHER	PTHR11850	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	coord: 15..194

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005124.1	HG10005124.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding