HG10005055 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005055
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	F-box protein At1g67340-like
Location	Chr08: 22567012 .. 22568314 (-)
RNA-Seq Expression	HG10005055
Synteny	HG10005055

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAACCCCCACTCCCAACAACATCACCATGAACAACAACACACCATTTTATTCTCCTTCCTTCAAAAGAAATCGCTTCTCTTCTAAATCTGATTTCTTTGACTCTTTACCTGACGATCTTCTCATCTCTATTCTCTCTAAACTTGCCTCCTCTGCTTCCTCCCCTTCAGATTTCATCAAAGCTTTGATTACGTACGTCATCTTATTCTTATTGCACTTTTTTTTTTTCTTTTTCTTATATGAATTAAAGATGAACAATTTTGTCTGATGGAATTTGGGTGTTAACAGATGCAAGAGATTCAACAATTTAGGGCGTCATTCCCTTGTTTTATCCAAAGCTTCTCAAAGAACTTTGGGAATTACTGCCAAAAACTGGTCGGAATCAGCCCACCGCTTCCTCAAACAGTGCGTTGACGCCGGCAACGTTGAGGCTTGTTATATTCTCGGCATGGTAAAAGGATTAAAAGGAAATTGAGAATTTTTTTCCTTTTTTTTTCTGTTTTGTTTTGGGTCTCTGAATTGTTTTTTTTTTTCCCTTCTAGATTCGATTTTACTGTCTGCAAAACCGAGGGAGTGGAGCTTCTTTAATGGCGAAGGCAGCGATTAGCTCACACGCTCCGGCGCTATACTCACTCGCCGTCATACAGTTCAACGGCAGCGGTGGCTCAAAGAACGATAAGGATTTAAGAGCGGGTGTGGCTCTTTGTGCCAGAGCTGCCTTTTTGGGCCATATTGACGCTTTAAGGGAGCTTGGACATTGTCTTCAAGATGGCTATGGGGTTTGTCAGAACATTATGGAGGGCCGTCGGTTTTTAGTTCAAGCCAACGCAAGGGAACTCGCCGCCGTGCTGTCGTCGTCGACGGCGGCGGCTTCACGTTCTTGGGTCACGTGCAATCCACACGCTCACAACCGCACGGCGGTGGGGTCGTCCTCCGAGTGCCCGTTGCTGAGCGATTTTGGGTGTAATGTTCCGGCGCCGGAAGCTCATCCGGCGAGCAGGTTTTTGGCGGAGTGGTTCGCCTTACGCGGCGGCGCGCCGGGGCCGGGGCTGAGGCTTTGTTCACACGTGGGGTGTGGACGGCCGGAGACAAGGAGGCATGAGTTTCGTCGGTGTTCGGTTTGTGGGATTGTTAACTACTGCTCACGTGCCTGTCAGGCGCTCGATTGGAAGCTGCAGCATAAAGCGGAATGTGCACCGTTGGAGATTTGGCCGGAAAATGACGGTGACGGCGGTGAAGCCGACGGCGACGGTGACCTTCTAAATGAGAATGACGATGAGGATGTAATTGGAGAAAGTTAA

mRNA sequence

ATGAGAACCCCCACTCCCAACAACATCACCATGAACAACAACACACCATTTTATTCTCCTTCCTTCAAAAGAAATCGCTTCTCTTCTAAATCTGATTTCTTTGACTCTTTACCTGACGATCTTCTCATCTCTATTCTCTCTAAACTTGCCTCCTCTGCTTCCTCCCCTTCAGATTTCATCAAAGCTTTGATTACATGCAAGAGATTCAACAATTTAGGGCGTCATTCCCTTGTTTTATCCAAAGCTTCTCAAAGAACTTTGGGAATTACTGCCAAAAACTGGTCGGAATCAGCCCACCGCTTCCTCAAACAGTGCGTTGACGCCGGCAACGTTGAGGCTTGTTATATTCTCGGCATGATTCGATTTTACTGTCTGCAAAACCGAGGGAGTGGAGCTTCTTTAATGGCGAAGGCAGCGATTAGCTCACACGCTCCGGCGCTATACTCACTCGCCGTCATACAGTTCAACGGCAGCGGTGGCTCAAAGAACGATAAGGATTTAAGAGCGGGTGTGGCTCTTTGTGCCAGAGCTGCCTTTTTGGGCCATATTGACGCTTTAAGGGAGCTTGGACATTGTCTTCAAGATGGCTATGGGGTTTGTCAGAACATTATGGAGGGCCGTCGGTTTTTAGTTCAAGCCAACGCAAGGGAACTCGCCGCCGTGCTGTCGTCGTCGACGGCGGCGGCTTCACGTTCTTGGGTCACGTGCAATCCACACGCTCACAACCGCACGGCGGTGGGGTCGTCCTCCGAGTGCCCGTTGCTGAGCGATTTTGGGTGTAATGTTCCGGCGCCGGAAGCTCATCCGGCGAGCAGGTTTTTGGCGGAGTGGTTCGCCTTACGCGGCGGCGCGCCGGGGCCGGGGCTGAGGCTTTGTTCACACGTGGGGTGTGGACGGCCGGAGACAAGGAGGCATGAGTTTCGTCGGTGTTCGGTTTGTGGGATTGTTAACTACTGCTCACGTGCCTGTCAGGCGCTCGATTGGAAGCTGCAGCATAAAGCGGAATGTGCACCGTTGGAGATTTGGCCGGAAAATGACGGTGACGGCGGTGAAGCCGACGGCGACGGTGACCTTCTAAATGAGAATGACGATGAGGATGTAATTGGAGAAAGTTAA

Coding sequence (CDS)

ATGAGAACCCCCACTCCCAACAACATCACCATGAACAACAACACACCATTTTATTCTCCTTCCTTCAAAAGAAATCGCTTCTCTTCTAAATCTGATTTCTTTGACTCTTTACCTGACGATCTTCTCATCTCTATTCTCTCTAAACTTGCCTCCTCTGCTTCCTCCCCTTCAGATTTCATCAAAGCTTTGATTACATGCAAGAGATTCAACAATTTAGGGCGTCATTCCCTTGTTTTATCCAAAGCTTCTCAAAGAACTTTGGGAATTACTGCCAAAAACTGGTCGGAATCAGCCCACCGCTTCCTCAAACAGTGCGTTGACGCCGGCAACGTTGAGGCTTGTTATATTCTCGGCATGATTCGATTTTACTGTCTGCAAAACCGAGGGAGTGGAGCTTCTTTAATGGCGAAGGCAGCGATTAGCTCACACGCTCCGGCGCTATACTCACTCGCCGTCATACAGTTCAACGGCAGCGGTGGCTCAAAGAACGATAAGGATTTAAGAGCGGGTGTGGCTCTTTGTGCCAGAGCTGCCTTTTTGGGCCATATTGACGCTTTAAGGGAGCTTGGACATTGTCTTCAAGATGGCTATGGGGTTTGTCAGAACATTATGGAGGGCCGTCGGTTTTTAGTTCAAGCCAACGCAAGGGAACTCGCCGCCGTGCTGTCGTCGTCGACGGCGGCGGCTTCACGTTCTTGGGTCACGTGCAATCCACACGCTCACAACCGCACGGCGGTGGGGTCGTCCTCCGAGTGCCCGTTGCTGAGCGATTTTGGGTGTAATGTTCCGGCGCCGGAAGCTCATCCGGCGAGCAGGTTTTTGGCGGAGTGGTTCGCCTTACGCGGCGGCGCGCCGGGGCCGGGGCTGAGGCTTTGTTCACACGTGGGGTGTGGACGGCCGGAGACAAGGAGGCATGAGTTTCGTCGGTGTTCGGTTTGTGGGATTGTTAACTACTGCTCACGTGCCTGTCAGGCGCTCGATTGGAAGCTGCAGCATAAAGCGGAATGTGCACCGTTGGAGATTTGGCCGGAAAATGACGGTGACGGCGGTGAAGCCGACGGCGACGGTGACCTTCTAAATGAGAATGACGATGAGGATGTAATTGGAGAAAGTTAA

Protein sequence

MRTPTPNNITMNNNTPFYSPSFKRNRFSSKSDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLGRHSLVLSKASQRTLGITAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSSTAAASRSWVTCNPHAHNRTAVGSSSECPLLSDFGCNVPAPEAHPASRFLAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEIWPENDGDGGEADGDGDLLNENDDEDVIGES

Homology

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BLAST of HG10005055 vs. NCBI nr
Match: XP_038885404.1 (F-box protein At1g67340-like [Benincasa hispida])

HSP 1 Score: 694.5 bits (1791), Expect = 5.0e-196
Identity = 356/378 (94.18%), Postives = 362/378 (95.77%), Query Frame = 0


Query: 1   MRT-PTPNNITMN-NNTPF---YSPSFKRNR-FSSKSDFFDSLPDDLLISILSKLASSAS 60
           MRT  TPN+ITMN  NTPF    S SFKRNR FSSKSDFFDSLPDDLLISILSKLASSAS
Sbjct: 1   MRTSTTPNSITMNKTNTPFSSSSSSSFKRNRCFSSKSDFFDSLPDDLLISILSKLASSAS 60

Query: 61  SPSDFIKALITCKRFNNLGRHSLVLSKASQRTLGITAKNWSESAHRFLKQCVDAGNVEAC 120
           SPSDFIK LITCKRFNNLGRHSLVLSKASQRTLGI AKNWSESAHRFLKQCVDAGNVEAC
Sbjct: 61  SPSDFIKPLITCKRFNNLGRHSLVLSKASQRTLGINAKNWSESAHRFLKQCVDAGNVEAC 120

Query: 121 YILGMIRFYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALC 180
           YILGMIRFYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALC
Sbjct: 121 YILGMIRFYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALC 180

Query: 181 ARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSSTA-AASRSW 240
           ARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSSTA A SRSW
Sbjct: 181 ARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSSTAGAGSRSW 240

Query: 241 VTCNPHAHNRTAVGSSSECPLLSDFGCNVPAPEAHPASRFLAEWFALRGGAPGPGLRLCS 300
           VTCNP AH+RTAVGSS+ECPLLSDFGCNVPAPEAHPASRF+AEWFALRGGAPGPGLRLCS
Sbjct: 241 VTCNPIAHHRTAVGSSAECPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCS 300

Query: 301 HVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEIWPENDGDGGEAD 360
           HVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEIWPENDGDGGEA+
Sbjct: 301 HVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEIWPENDGDGGEAN 360

Query: 361 GDGDLLNENDDEDVIGES 372
           GDG +LNENDDEDVIGES
Sbjct: 361 GDGGILNENDDEDVIGES 378

[Close]

BLAST of HG10005055 vs. NCBI nr
Match: XP_008444448.1 (PREDICTED: F-box protein At1g67340-like [Cucumis melo])

HSP 1 Score: 682.2 bits (1759), Expect = 2.5e-192
Identity = 340/371 (91.64%), Postives = 350/371 (94.34%), Query Frame = 0


Query: 1   MRTPTPNNITMNNNTPFYSPSFKRNRFSSKSDFFDSLPDDLLISILSKLASSASSPSDFI 60
           MRTP P  ITMNNN        KRNRF  KSDFFDSLPDDLLISILSKLASSASSPS FI
Sbjct: 1   MRTPAPTTITMNNNN-------KRNRFYPKSDFFDSLPDDLLISILSKLASSASSPSHFI 60

Query: 61  KALITCKRFNNLGRHSLVLSKASQRTLGITAKNWSESAHRFLKQCVDAGNVEACYILGMI 120
            ALITCKRFN+LGRHSLVLSKASQRTLGI+AKNWSESAHRFLKQCVDAGNVEACYILGMI
Sbjct: 61  NALITCKRFNHLGRHSLVLSKASQRTLGISAKNWSESAHRFLKQCVDAGNVEACYILGMI 120

Query: 121 RFYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFL 180
           RFYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFL
Sbjct: 121 RFYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFL 180

Query: 181 GHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSSTAAASRSWVTCNPHA 240
           GHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSS ++AASRSWVTCNP A
Sbjct: 181 GHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSPSSAASRSWVTCNPQA 240

Query: 241 HNRTAVGSSSECPLLSDFGCNVPAPEAHPASRFLAEWFALRGGAPGPGLRLCSHVGCGRP 300
            +RTAVGSSSECPLLSDFGCNVPAPEAHPASRF+AEWFALRGGAPGPGLRLCSHVGCGRP
Sbjct: 241 IHRTAVGSSSECPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGRP 300

Query: 301 ETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEIWPENDGDGGEADGDGDLLN 360
           ETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEIWPENDGD GE DG+G +LN
Sbjct: 301 ETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEIWPENDGDDGEVDGEGGILN 360

Query: 361 ENDDEDVIGES 372
           EN+DEDV+GES
Sbjct: 361 ENEDEDVVGES 364

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BLAST of HG10005055 vs. NCBI nr
Match: XP_004143042.1 (F-box protein At1g67340 [Cucumis sativus] >KGN62374.1 hypothetical protein Csa_018766 [Cucumis sativus])

HSP 1 Score: 663.3 bits (1710), Expect = 1.2e-186
Identity = 336/378 (88.89%), Postives = 347/378 (91.80%), Query Frame = 0


Query: 1   MRTPTPNNITMNNNTPFYSPSFKRNRFSSKSDFFDSLPDDLLISILSKLASSASSPSDFI 60
           MRTPTP  ITMNNN        KRNRF  K DFFDSLPDDLLISILSKL SSASSPS FI
Sbjct: 1   MRTPTPTTITMNNNN-------KRNRFYPKFDFFDSLPDDLLISILSKLVSSASSPSHFI 60

Query: 61  KALITCKRFNNLGRHSLVLSKASQRTLGITAKNWSESAHRFLKQCVDAGNVEACYILGMI 120
            ALITCKRFN+LGRHSLVLSKASQRTLGI+AKNWSESAHRFLKQCVDAGNVEACYILGMI
Sbjct: 61  NALITCKRFNHLGRHSLVLSKASQRTLGISAKNWSESAHRFLKQCVDAGNVEACYILGMI 120

Query: 121 RFYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFL 180
           RFYCLQNRGSGASLMAKAAISS+APALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFL
Sbjct: 121 RFYCLQNRGSGASLMAKAAISSYAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFL 180

Query: 181 GHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSSTAAASRSWVTCNPHA 240
           GH+DALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSS ++AASRS VTCNPHA
Sbjct: 181 GHVDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSPSSAASRSLVTCNPHA 240

Query: 241 HNRTAVGSSSECPLLSDFGCNVPAPEAHPASRFLAEWFALRGGAPGPGLRLCSHVGCGRP 300
            +RTAVGSSS+CPLLSDFGCNVPAPEAHPASRF+AEWFALRGGAPGPGLRLCSHVGCGRP
Sbjct: 241 IHRTAVGSSSDCPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGRP 300

Query: 301 ETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEIWPENDGDGGEADGDGDLLN 360
           ETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEIWPENDGD  E DGDG +LN
Sbjct: 301 ETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEIWPENDGDDVEVDGDGGILN 360

Query: 361 EN-------DDEDVIGES 372
           EN       DD+DVI ES
Sbjct: 361 ENEEDDDEDDDDDVIEES 371

[Close]

BLAST of HG10005055 vs. NCBI nr
Match: XP_023002802.1 (F-box protein At1g67340-like [Cucurbita maxima])

HSP 1 Score: 630.9 bits (1626), Expect = 6.7e-177
Identity = 314/368 (85.33%), Postives = 335/368 (91.03%), Query Frame = 0


Query: 14  NTPFYSPSFKRNRFS------SKSDFFDSLPDDLLISILSKLASSASSPSDFIKALITCK 73
           N  ++S S KR RFS      + SDFF SLPDDLLISILSKL+++ASSPSDFI ALITCK
Sbjct: 37  NLQYFSGSPKRKRFSPPRSSAAVSDFFQSLPDDLLISILSKLSANASSPSDFISALITCK 96

Query: 74  RFNNLGRHSLVLSKASQRTLGITAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQN 133
           RFNNLGRHSLVL+KASQ+TL I AKNWSESAHRFLK CVDAGNVEACYILGMIRFYCLQN
Sbjct: 97  RFNNLGRHSLVLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACYILGMIRFYCLQN 156

Query: 134 RGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALR 193
           RGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALR
Sbjct: 157 RGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALR 216

Query: 194 ELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSS----STAAASRSWVTCNPHAHNR 253
           ELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSS    +T  A+RSWVTC+PH H+R
Sbjct: 217 ELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSTAATATGGAARSWVTCDPHTHHR 276

Query: 254 TAVGSSSECPLLSDFGCNVPAPEAHPASRFLAEWFALRGGAPGPGLRLCSHVGCGRPETR 313
            AVGSS+ECPLLSDFGCNVPA EAHPASRF+AEWFA+RGG PGPGLRLCSHVGCGRPETR
Sbjct: 277 AAVGSSTECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRLCSHVGCGRPETR 336

Query: 314 RHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEIWPENDGDGGEADGDGDLLNEND 372
           RHEFRRCSVCGIVNYCSRACQALDWKLQHKAEC+PLE+WPEN+G+GG  DGDG + NEN+
Sbjct: 337 RHEFRRCSVCGIVNYCSRACQALDWKLQHKAECSPLELWPENEGEGGVGDGDGGVQNENE 396

[Close]

BLAST of HG10005055 vs. NCBI nr
Match: XP_023537715.1 (F-box protein At1g67340-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 623.6 bits (1607), Expect = 1.1e-174
Identity = 313/368 (85.05%), Postives = 334/368 (90.76%), Query Frame = 0


Query: 14  NTPFYSPSFKRNRFSSK------SDFFDSLPDDLLISILSKLASSASSPSDFIKALITCK 73
           N  ++S S KR RFS        SDFF SLPDDLLISILSKL+++ASSPSDFI ALITCK
Sbjct: 13  NLQYFSGSPKRRRFSPPRSSAVVSDFFQSLPDDLLISILSKLSATASSPSDFISALITCK 72

Query: 74  RFNNLGRHSLVLSKASQRTLGITAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQN 133
           RFNNLGRHSLVL+KASQ+TL I AKNWSESAHRFLK CVDAGNVEACYILGMIRFYCLQN
Sbjct: 73  RFNNLGRHSLVLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACYILGMIRFYCLQN 132

Query: 134 RGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALR 193
           RGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALR
Sbjct: 133 RGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALR 192

Query: 194 ELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSS----TAAASRSWVTCNPHAHNR 253
           ELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSS+    T  A+RSWVTC+PH H+R
Sbjct: 193 ELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSTAATVTGGAARSWVTCDPHTHHR 252

Query: 254 TAVGSSSECPLLSDFGCNVPAPEAHPASRFLAEWFALRGGAPGPGLRLCSHVGCGRPETR 313
           TAVGSS+ECPLLSDFGCNVPA EAHPASRF+AEWFA+RGG PGPGLRLCSHVGCGRPETR
Sbjct: 253 TAVGSSTECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRLCSHVGCGRPETR 312

Query: 314 RHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEIWPENDGDGGEADGDGDLLNEND 372
           RHEFRRCSVCGIVNYCSRACQALDWKLQHKAEC+PLE+WPEN+G+GG   G+G + NEN+
Sbjct: 313 RHEFRRCSVCGIVNYCSRACQALDWKLQHKAECSPLELWPENEGEGGV--GEGGVENENE 372

[Close]

BLAST of HG10005055 vs. ExPASy Swiss-Prot
Match: Q9FYF9 (F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 5.1e-135
Identity = 238/332 (71.69%), Postives = 274/332 (82.53%), Query Frame = 0


Query: 31  SDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLGRHSLVLSKASQRTLGIT 90
           +D  DS+PDDL+ISIL KL S++  P+DFI  L+TCKR   L  + +VLS+ S + + + 
Sbjct: 41  ADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVK 100

Query: 91  AKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISSHAPALYSL 150
           A NWSE +HRFLK+CVDAG++EACY LGMIRFYCLQNRG+GASLMAKAAISSHAPALYSL
Sbjct: 101 AHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSL 160

Query: 151 AVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFL 210
           AVIQFNGSGGSKNDKDLRAGVALCARAAFLGH+DALRELGHCLQDGYGV QN+ EGRRFL
Sbjct: 161 AVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFL 220

Query: 211 VQANARELAAVLSSSTAAASRSWVTCNPHAHNRTAVGSSSECPLLSDFGCNVPAPEAHPA 270
           VQANARELAAVLSS   A S +W++ +              CPLLSDFGCNVPAPE HPA
Sbjct: 221 VQANARELAAVLSSGIQARS-TWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETHPA 280

Query: 271 SRFLAEWFALRGG-APGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWK 330
           +RFLA+WFA+RGG  PG GLRLCSH GCGRPETR+HEFRRCSVCG+VNYCSRACQALDWK
Sbjct: 281 NRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWK 340

Query: 331 LQHKAECAPLEIWPENDGDGGEA----DGDGD 358
           L+HK +CAP++ W E +GDGGE     DG+G+
Sbjct: 341 LRHKMDCAPVQRWLE-EGDGGEGNVQIDGNGN 370

[Close]

BLAST of HG10005055 vs. ExPASy Swiss-Prot
Match: Q9FK27 (F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 3.9e-111
Identity = 207/333 (62.16%), Postives = 245/333 (73.57%), Query Frame = 0


Query: 23  KRNRFSSKSDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLGRHSLVLSKA 82
           + N  ++ ++ F+ L DDL+ISIL KLA+SASSPSDF+  L TCKR N LG H LVLSKA
Sbjct: 11  ENNHNNTVNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKA 70

Query: 83  SQRTLGITAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISS 142
             +TL +TA+ WS+S+H+FLK CV+AGN++A Y LGMIRFYCLQN  SGASLMAKAAI S
Sbjct: 71  GTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKS 130

Query: 143 HAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQN 202
           HAPALYSL+VIQFNGSGGSK DK+LRAGVALCAR+A+LGH+DALRELGHCLQDGYGV ++
Sbjct: 131 HAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRD 190

Query: 203 IMEGRRFLVQANARELAAVLSSSTAAASRSWVTCNPHAHNRTAVGSSSECPLLSDFGCNV 262
           + EGRR L+QANARELA  L        RS+++      N T          L+D    V
Sbjct: 191 VSEGRRLLIQANARELACSL--------RSYLSLKSGDENET----------LTDLSV-V 250

Query: 263 PAPEAHPASRFLAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRA 322
           P  E HP +RFL EWF+        GLR+CSH GCGRPETR HEFRRCSVCG VNYCSR 
Sbjct: 251 PVQEIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRG 310

Query: 323 CQALDWKLQHKAECAPLEIW---PENDGDGGEA 353
           CQALDW+ +HK EC PL++W       GD GEA
Sbjct: 311 CQALDWRAKHKVECTPLDLWVAAAAEIGDDGEA 324

[Close]

BLAST of HG10005055 vs. ExPASy Swiss-Prot
Match: Q2YDC9 (Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.3e-05
Identity = 30/88 (34.09%), Postives = 42/88 (47.73%), Query Frame = 0


Query: 250 SECPLLSDFGCNVPAPEAHPASRFLAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRR 309
           ++ P  +DF    P  E  P+    + +  L+ GA      LC   GC  P       +R
Sbjct: 98  NQLPRQNDFYSYEPPSEDPPSETGESVYLHLKSGA-----HLCRVCGCSGP-------KR 157

Query: 310 CSVCGIVNYCSRACQALDWKLQHKAECA 338
           CS C   +YCS+  Q+LDW+L HK  CA
Sbjct: 158 CSRCHKAHYCSKEHQSLDWRLGHKQACA 173

[Close]

BLAST of HG10005055 vs. ExPASy Swiss-Prot
Match: Q16342 (Programmed cell death protein 2 OS=Homo sapiens OX=9606 GN=PDCD2 PE=1 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 4.2e-04
Identity = 30/88 (34.09%), Postives = 38/88 (43.18%), Query Frame = 0


Query: 250 SECPLLSDFGCNVPAPEAHPASRFLAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRR 309
           ++ P  +DF    P  E  P     +    L+ GA      LC   GC  P+T       
Sbjct: 98  NQLPRKNDFYSYEPPSENPPPETGESVCLQLKSGA-----HLCRVCGCLGPKT------- 157

Query: 310 CSVCGIVNYCSRACQALDWKLQHKAECA 338
           CS C    YCS+  Q LDW+L HK  CA
Sbjct: 158 CSRCHKAYYCSKEHQTLDWRLGHKQACA 173

[Close]

BLAST of HG10005055 vs. ExPASy Swiss-Prot
Match: Q9FPS9 (Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana OX=3702 GN=UBP15 PE=1 SV=2)

HSP 1 Score: 46.2 bits (108), Expect = 9.3e-04
Identity = 17/32 (53.12%), Postives = 21/32 (65.62%), Query Frame = 0


Query: 309 RCSVCGIVNYCSRACQALDWKLQHKAECAPLE 341
           RCS C  V YCS  CQ + W++ HK EC P+E
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of HG10005055 vs. ExPASy TrEMBL
Match: A0A1S3BB38 (F-box protein At1g67340-like OS=Cucumis melo OX=3656 GN=LOC103487769 PE=4 SV=1)

HSP 1 Score: 682.2 bits (1759), Expect = 1.2e-192
Identity = 340/371 (91.64%), Postives = 350/371 (94.34%), Query Frame = 0


Query: 1   MRTPTPNNITMNNNTPFYSPSFKRNRFSSKSDFFDSLPDDLLISILSKLASSASSPSDFI 60
           MRTP P  ITMNNN        KRNRF  KSDFFDSLPDDLLISILSKLASSASSPS FI
Sbjct: 1   MRTPAPTTITMNNNN-------KRNRFYPKSDFFDSLPDDLLISILSKLASSASSPSHFI 60

Query: 61  KALITCKRFNNLGRHSLVLSKASQRTLGITAKNWSESAHRFLKQCVDAGNVEACYILGMI 120
            ALITCKRFN+LGRHSLVLSKASQRTLGI+AKNWSESAHRFLKQCVDAGNVEACYILGMI
Sbjct: 61  NALITCKRFNHLGRHSLVLSKASQRTLGISAKNWSESAHRFLKQCVDAGNVEACYILGMI 120

Query: 121 RFYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFL 180
           RFYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFL
Sbjct: 121 RFYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFL 180

Query: 181 GHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSSTAAASRSWVTCNPHA 240
           GHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSS ++AASRSWVTCNP A
Sbjct: 181 GHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSPSSAASRSWVTCNPQA 240

Query: 241 HNRTAVGSSSECPLLSDFGCNVPAPEAHPASRFLAEWFALRGGAPGPGLRLCSHVGCGRP 300
            +RTAVGSSSECPLLSDFGCNVPAPEAHPASRF+AEWFALRGGAPGPGLRLCSHVGCGRP
Sbjct: 241 IHRTAVGSSSECPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGRP 300

Query: 301 ETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEIWPENDGDGGEADGDGDLLN 360
           ETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEIWPENDGD GE DG+G +LN
Sbjct: 301 ETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEIWPENDGDDGEVDGEGGILN 360

Query: 361 ENDDEDVIGES 372
           EN+DEDV+GES
Sbjct: 361 ENEDEDVVGES 364

[Close]

BLAST of HG10005055 vs. ExPASy TrEMBL
Match: A0A0A0LMZ9 (MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G351550 PE=4 SV=1)

HSP 1 Score: 663.3 bits (1710), Expect = 5.9e-187
Identity = 336/378 (88.89%), Postives = 347/378 (91.80%), Query Frame = 0


Query: 1   MRTPTPNNITMNNNTPFYSPSFKRNRFSSKSDFFDSLPDDLLISILSKLASSASSPSDFI 60
           MRTPTP  ITMNNN        KRNRF  K DFFDSLPDDLLISILSKL SSASSPS FI
Sbjct: 1   MRTPTPTTITMNNNN-------KRNRFYPKFDFFDSLPDDLLISILSKLVSSASSPSHFI 60

Query: 61  KALITCKRFNNLGRHSLVLSKASQRTLGITAKNWSESAHRFLKQCVDAGNVEACYILGMI 120
            ALITCKRFN+LGRHSLVLSKASQRTLGI+AKNWSESAHRFLKQCVDAGNVEACYILGMI
Sbjct: 61  NALITCKRFNHLGRHSLVLSKASQRTLGISAKNWSESAHRFLKQCVDAGNVEACYILGMI 120

Query: 121 RFYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFL 180
           RFYCLQNRGSGASLMAKAAISS+APALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFL
Sbjct: 121 RFYCLQNRGSGASLMAKAAISSYAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFL 180

Query: 181 GHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSSTAAASRSWVTCNPHA 240
           GH+DALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSS ++AASRS VTCNPHA
Sbjct: 181 GHVDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSPSSAASRSLVTCNPHA 240

Query: 241 HNRTAVGSSSECPLLSDFGCNVPAPEAHPASRFLAEWFALRGGAPGPGLRLCSHVGCGRP 300
            +RTAVGSSS+CPLLSDFGCNVPAPEAHPASRF+AEWFALRGGAPGPGLRLCSHVGCGRP
Sbjct: 241 IHRTAVGSSSDCPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGRP 300

Query: 301 ETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEIWPENDGDGGEADGDGDLLN 360
           ETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEIWPENDGD  E DGDG +LN
Sbjct: 301 ETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEIWPENDGDDVEVDGDGGILN 360

Query: 361 EN-------DDEDVIGES 372
           EN       DD+DVI ES
Sbjct: 361 ENEEDDDEDDDDDVIEES 371

[Close]

BLAST of HG10005055 vs. ExPASy TrEMBL
Match: A0A6J1KKI0 (F-box protein At1g67340-like OS=Cucurbita maxima OX=3661 GN=LOC111496556 PE=4 SV=1)

HSP 1 Score: 630.9 bits (1626), Expect = 3.3e-177
Identity = 314/368 (85.33%), Postives = 335/368 (91.03%), Query Frame = 0


Query: 14  NTPFYSPSFKRNRFS------SKSDFFDSLPDDLLISILSKLASSASSPSDFIKALITCK 73
           N  ++S S KR RFS      + SDFF SLPDDLLISILSKL+++ASSPSDFI ALITCK
Sbjct: 37  NLQYFSGSPKRKRFSPPRSSAAVSDFFQSLPDDLLISILSKLSANASSPSDFISALITCK 96

Query: 74  RFNNLGRHSLVLSKASQRTLGITAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQN 133
           RFNNLGRHSLVL+KASQ+TL I AKNWSESAHRFLK CVDAGNVEACYILGMIRFYCLQN
Sbjct: 97  RFNNLGRHSLVLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACYILGMIRFYCLQN 156

Query: 134 RGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALR 193
           RGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALR
Sbjct: 157 RGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALR 216

Query: 194 ELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSS----STAAASRSWVTCNPHAHNR 253
           ELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSS    +T  A+RSWVTC+PH H+R
Sbjct: 217 ELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSTAATATGGAARSWVTCDPHTHHR 276

Query: 254 TAVGSSSECPLLSDFGCNVPAPEAHPASRFLAEWFALRGGAPGPGLRLCSHVGCGRPETR 313
            AVGSS+ECPLLSDFGCNVPA EAHPASRF+AEWFA+RGG PGPGLRLCSHVGCGRPETR
Sbjct: 277 AAVGSSTECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRLCSHVGCGRPETR 336

Query: 314 RHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEIWPENDGDGGEADGDGDLLNEND 372
           RHEFRRCSVCGIVNYCSRACQALDWKLQHKAEC+PLE+WPEN+G+GG  DGDG + NEN+
Sbjct: 337 RHEFRRCSVCGIVNYCSRACQALDWKLQHKAECSPLELWPENEGEGGVGDGDGGVQNENE 396

[Close]

BLAST of HG10005055 vs. ExPASy TrEMBL
Match: A0A6J1GHQ9 (F-box protein At1g67340-like OS=Cucurbita moschata OX=3662 GN=LOC111454044 PE=4 SV=1)

HSP 1 Score: 621.7 bits (1602), Expect = 2.0e-174
Identity = 312/368 (84.78%), Postives = 333/368 (90.49%), Query Frame = 0


Query: 14  NTPFYSPSFKRNRFSSK------SDFFDSLPDDLLISILSKLASSASSPSDFIKALITCK 73
           N  ++S S KR RFS        SDFF SLPDDLLISILSKL+++ASSPSDFI ALITCK
Sbjct: 37  NLQYFSGSPKRRRFSPPRSSAVVSDFFQSLPDDLLISILSKLSATASSPSDFISALITCK 96

Query: 74  RFNNLGRHSLVLSKASQRTLGITAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQN 133
           RFNNLGRHSLVL+KASQ+TL I AKNWSESAHRFLK CVDAGNVEACYILGMIRFYCLQN
Sbjct: 97  RFNNLGRHSLVLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACYILGMIRFYCLQN 156

Query: 134 RGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALR 193
           RGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALR
Sbjct: 157 RGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALR 216

Query: 194 ELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSS----TAAASRSWVTCNPHAHNR 253
           ELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSS+    T  A+RSWVTC+PH H+R
Sbjct: 217 ELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSTAATVTGGAARSWVTCDPHTHHR 276

Query: 254 TAVGSSSECPLLSDFGCNVPAPEAHPASRFLAEWFALRGGAPGPGLRLCSHVGCGRPETR 313
            AVGSS+ECPLLSDFGCNVPA EAHPASRF+AEWFA+RGG PGPGLRLCSHVGCGRPETR
Sbjct: 277 AAVGSSTECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRLCSHVGCGRPETR 336

Query: 314 RHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEIWPENDGDGGEADGDGDLLNEND 372
           RHEFRRCSVCGIVNYCSRACQALDWKLQHKAEC+PLE+WPEN+G+GG   G+G + NEN+
Sbjct: 337 RHEFRRCSVCGIVNYCSRACQALDWKLQHKAECSPLELWPENEGEGGV--GEGGVENENE 396

[Close]

BLAST of HG10005055 vs. ExPASy TrEMBL
Match: A0A067JVI5 (MYND-type domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_17961 PE=4 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 1.5e-150
Identity = 265/340 (77.94%), Postives = 293/340 (86.18%), Query Frame = 0


Query: 23  KRNRFS----SKSDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLGRHSLV 82
           KR R S     ++D FD+LPDDL++SIL K++SSAS PSDFI  LITCKR N LG HSLV
Sbjct: 40  KRQRLSPEIAGETDLFDTLPDDLVLSILCKISSSASCPSDFINVLITCKRLNGLGLHSLV 99

Query: 83  LSKASQRTLGITAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKA 142
           LSKASQ+T  I AKNWS+SAHRFLK C DAGNVEACY LGMIRFYCLQNRGSGASLMAKA
Sbjct: 100 LSKASQKTFAIIAKNWSDSAHRFLKLCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKA 159

Query: 143 AISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYG 202
           AISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYG
Sbjct: 160 AISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYG 219

Query: 203 VCQNIMEGRRFLVQANARELAAVLSS-STAAASRSWVTCNPHAHNRTAVGSSSECPLLSD 262
           V QN+ EGRRFLVQANARELAAVLS+ ++   +R+W+T NPHAH    + S   CPLLSD
Sbjct: 220 VRQNVAEGRRFLVQANARELAAVLSNPNSGLNTRAWLTWNPHAHPNHRLASGPGCPLLSD 279

Query: 263 FGCNVPAPEAHPASRFLAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVN 322
           FGCNVPAPEAHPASRF+A+WFA RGG PG GLRLCSHVGCGRPETR+HEFRRCSVCG VN
Sbjct: 280 FGCNVPAPEAHPASRFMADWFASRGGTPGSGLRLCSHVGCGRPETRKHEFRRCSVCGAVN 339

Query: 323 YCSRACQALDWKLQHKAECAPLEIWPENDGDGGEADGDGD 358
           YCSRACQALDWKL+HK ECAP+E W + +G+GG+ +  G+
Sbjct: 340 YCSRACQALDWKLRHKEECAPVERWVDEEGEGGDVEAGGE 379

[Close]

BLAST of HG10005055 vs. TAIR 10
Match: AT1G67340.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 482.3 bits (1240), Expect = 3.6e-136
Identity = 238/332 (71.69%), Postives = 274/332 (82.53%), Query Frame = 0


Query: 31  SDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLGRHSLVLSKASQRTLGIT 90
           +D  DS+PDDL+ISIL KL S++  P+DFI  L+TCKR   L  + +VLS+ S + + + 
Sbjct: 41  ADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVK 100

Query: 91  AKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISSHAPALYSL 150
           A NWSE +HRFLK+CVDAG++EACY LGMIRFYCLQNRG+GASLMAKAAISSHAPALYSL
Sbjct: 101 AHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSL 160

Query: 151 AVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFL 210
           AVIQFNGSGGSKNDKDLRAGVALCARAAFLGH+DALRELGHCLQDGYGV QN+ EGRRFL
Sbjct: 161 AVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFL 220

Query: 211 VQANARELAAVLSSSTAAASRSWVTCNPHAHNRTAVGSSSECPLLSDFGCNVPAPEAHPA 270
           VQANARELAAVLSS   A S +W++ +              CPLLSDFGCNVPAPE HPA
Sbjct: 221 VQANARELAAVLSSGIQARS-TWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETHPA 280

Query: 271 SRFLAEWFALRGG-APGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWK 330
           +RFLA+WFA+RGG  PG GLRLCSH GCGRPETR+HEFRRCSVCG+VNYCSRACQALDWK
Sbjct: 281 NRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWK 340

Query: 331 LQHKAECAPLEIWPENDGDGGEA----DGDGD 358
           L+HK +CAP++ W E +GDGGE     DG+G+
Sbjct: 341 LRHKMDCAPVQRWLE-EGDGGEGNVQIDGNGN 370

[Close]

BLAST of HG10005055 vs. TAIR 10
Match: AT5G50450.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 402.9 bits (1034), Expect = 2.8e-112
Identity = 207/333 (62.16%), Postives = 245/333 (73.57%), Query Frame = 0


Query: 23  KRNRFSSKSDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLGRHSLVLSKA 82
           + N  ++ ++ F+ L DDL+ISIL KLA+SASSPSDF+  L TCKR N LG H LVLSKA
Sbjct: 11  ENNHNNTVNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKA 70

Query: 83  SQRTLGITAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISS 142
             +TL +TA+ WS+S+H+FLK CV+AGN++A Y LGMIRFYCLQN  SGASLMAKAAI S
Sbjct: 71  GTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKS 130

Query: 143 HAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQN 202
           HAPALYSL+VIQFNGSGGSK DK+LRAGVALCAR+A+LGH+DALRELGHCLQDGYGV ++
Sbjct: 131 HAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRD 190

Query: 203 IMEGRRFLVQANARELAAVLSSSTAAASRSWVTCNPHAHNRTAVGSSSECPLLSDFGCNV 262
           + EGRR L+QANARELA  L        RS+++      N T          L+D    V
Sbjct: 191 VSEGRRLLIQANARELACSL--------RSYLSLKSGDENET----------LTDLSV-V 250

Query: 263 PAPEAHPASRFLAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRA 322
           P  E HP +RFL EWF+        GLR+CSH GCGRPETR HEFRRCSVCG VNYCSR 
Sbjct: 251 PVQEIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRG 310

Query: 323 CQALDWKLQHKAECAPLEIW---PENDGDGGEA 353
           CQALDW+ +HK EC PL++W       GD GEA
Sbjct: 311 CQALDWRAKHKVECTPLDLWVAAAAEIGDDGEA 324

[Close]

BLAST of HG10005055 vs. TAIR 10
Match: AT1G17110.1 (ubiquitin-specific protease 15 )

HSP 1 Score: 46.2 bits (108), Expect = 6.6e-05
Identity = 17/32 (53.12%), Postives = 21/32 (65.62%), Query Frame = 0


Query: 309 RCSVCGIVNYCSRACQALDWKLQHKAECAPLE 341
           RCS C  V YCS  CQ + W++ HK EC P+E
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of HG10005055 vs. TAIR 10
Match: AT1G17110.2 (ubiquitin-specific protease 15 )

HSP 1 Score: 46.2 bits (108), Expect = 6.6e-05
Identity = 17/32 (53.12%), Postives = 21/32 (65.62%), Query Frame = 0


Query: 309 RCSVCGIVNYCSRACQALDWKLQHKAECAPLE 341
           RCS C  V YCS  CQ + W++ HK EC P+E
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of HG10005055 vs. TAIR 10
Match: AT2G24640.1 (ubiquitin-specific protease 19 )

HSP 1 Score: 44.7 bits (104), Expect = 1.9e-04
Identity = 19/40 (47.50%), Postives = 23/40 (57.50%), Query Frame = 0


Query: 297 CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAEC 337
           CG+  T     ++CS C  V YCS ACQ  DWK  HK +C
Sbjct: 67  CGKATT-----KKCSRCKSVRYCSAACQTSDWKSGHKLKC 101

The following BLAST results are available for this feature:

BLAST of HG10005055 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885404.1	5.0e-196	94.18	F-box protein At1g67340-like [Benincasa hispida]	[more]
XP_008444448.1	2.5e-192	91.64	PREDICTED: F-box protein At1g67340-like [Cucumis melo]	[more]
XP_004143042.1	1.2e-186	88.89	F-box protein At1g67340 [Cucumis sativus] >KGN62374.1 hypothetical protein Csa_0...	[more]
XP_023002802.1	6.7e-177	85.33	F-box protein At1g67340-like [Cucurbita maxima]	[more]
XP_023537715.1	1.1e-174	85.05	F-box protein At1g67340-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10005055 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYF9	5.1e-135	71.69	F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1	[more]
Q9FK27	3.9e-111	62.16	F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1	[more]
Q2YDC9	1.3e-05	34.09	Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1	[more]
Q16342	4.2e-04	34.09	Programmed cell death protein 2 OS=Homo sapiens OX=9606 GN=PDCD2 PE=1 SV=2	[more]
Q9FPS9	9.3e-04	53.13	Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana OX=3702 GN=UBP1...	[more]

BLAST of HG10005055 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BB38	1.2e-192	91.64	F-box protein At1g67340-like OS=Cucumis melo OX=3656 GN=LOC103487769 PE=4 SV=1	[more]
A0A0A0LMZ9	5.9e-187	88.89	MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G351550 P...	[more]
A0A6J1KKI0	3.3e-177	85.33	F-box protein At1g67340-like OS=Cucurbita maxima OX=3661 GN=LOC111496556 PE=4 SV...	[more]
A0A6J1GHQ9	2.0e-174	84.78	F-box protein At1g67340-like OS=Cucurbita moschata OX=3662 GN=LOC111454044 PE=4 ...	[more]
A0A067JVI5	1.5e-150	77.94	MYND-type domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_17961 P...	[more]

BLAST of HG10005055 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67340.1	3.6e-136	71.69	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT5G50450.1	2.8e-112	62.16	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT1G17110.1	6.6e-05	53.13	ubiquitin-specific protease 15	[more]
AT1G17110.2	6.6e-05	53.13	ubiquitin-specific protease 15	[more]
AT2G24640.1	1.9e-04	47.50	ubiquitin-specific protease 19	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002893	Zinc finger, MYND-type	PFAM	PF01753	zf-MYND	coord: 297..336 e-value: 1.3E-7 score: 31.5
IPR002893	Zinc finger, MYND-type	PROSITE	PS50865	ZF_MYND_2	coord: 294..336 score: 10.9113
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 96..226 e-value: 3.9E-13 score: 51.4
None	No IPR available	GENE3D	6.10.140.2220		coord: 291..343 e-value: 2.2E-11 score: 45.3
None	No IPR available	GENE3D	1.20.1280.50		coord: 22..78 e-value: 4.0E-5 score: 25.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 346..371
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 341..371
None	No IPR available	PANTHER	PTHR46758:SF2	OSJNBA0044M19.1 PROTEIN	coord: 23..358
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 92..213
None	No IPR available	SUPERFAMILY	144232	HIT/MYND zinc finger-like	coord: 291..339
IPR044508	F-box protein At5g50450/At1g67340-like	PANTHER	PTHR46758	MYND DOMAIN-CONTAINING	coord: 23..358
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 28..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005055.1	HG10005055.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding