HG10005001 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005001
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
Location	Chr08: 22064001 .. 22066529 (+)
RNA-Seq Expression	HG10005001
Synteny	HG10005001

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAACTCTCTGCTGCGTAGGTACAAATTCGATCGTTTGAATCGATCAGCTTTTGTTCATTGGACAAGATTGCTTTCTTCCGACTCCTTGGTTGAGTTCAAGCCAGGGGAGATCGGCATAGTATCCGGTATCCCTGAAGAGCATATCCGTCGTCGGGTATGCATTTCTAGCGGTGAAAATAGTTGCTCTCTGTTTAGTTTAGTTTCAGATATATTGGACGAAATTTATTGAATCCAACTTCTGTTGTATAGTTGATTTTGTAGAATGTTGGAGAAAGAGCTAAAGACTGTCAGATTAGAGAATTGAACTGGAATCAGGTTTAGCGCTACTTTAGGAATTAGAGTGAACATTGTCCTTTCTAAGGAAAACTTCGCTGCATGAGTATTAGATAAATACAAGGATGGTGATGTTTTTCTATCCTACAGTGTTTATTTGAGTCTACTATACTCGAGTCAGATGTCCATTTTTTTAGACTCAATATCCGTTTGAGCTTAAACATAGAGTTTCATCTCAAAATTAATTAAAAATAGACCTCAACAATGAGGGTTTAGCATGGTTTTGTTGAATGAAGAGGATCCGTAGGATTTTGTTAGGAATATTAGTGGCATAATTGTAATTACCTGTTATTTTATTAGGATGAGTGGTTATAAATACACAGGGTTGGGAAGTTGAGGGGAGGTATAATTTTGGGAGTTGGAGATTTTGAAGAGAGATAGCCCTCTCAGAAGGCTGACTTTTGATATTGTAGTTTCTCTTTTGGTATTGCAATAATGTTTCTTGTGATTGGTATTCTAACAAAGTACTGTCAGTATTTGAGCTTATAGAGGAACCGATTGGATTGTCTTCCTTTATGCATTGCAGGTTATCATCTACTCACCTGCTAGAACCGCCACACAGCAAGGCTCTGGGAAAGTTGGGAAATGGAAGATTAATTTTCTCTCTACACACAAGTATGATTTCTTCAATTGCAAAGCCCGGACTGACTCCTCTGTTATCATAATCTATGTCGTATACTAACAGATTCATATTTAATCTTTGTCTTATTTTGTTATCATTCCTTGCATTATACTTCATGGTTTACATTTGATTTTATAATAGCCATTTACCATTTTTCTTTACGACAAGTCATTTTTCTTAGTCTAGGACTGGAGAACAAAACTGAGATGAAAAGATTGACTCCTTGGCATTTACCTTGCTCTGGACTTGCTCAATTGGATTTTGGGTTTTGTTCTCATGCATTTTCGAGATAATTTAAAACTGAAGCAATTATTAACAAACAAGCTTTGCTAAAAACTGGATTCCGTTTTCTTAAGTTTTCGTAGCTATTCTAGATATTGTGAATCAATCGCCCTTTCTTATCTGACCCCATTTGCTTAGGTGGGAAAATCCCTTGATGGGATGGACATCCACAGGAGACCCATATGCTAATGTCGGTGATGCAGCCCTTAGTTTTGATAGTGCAGAAGCTGCAATGAGGTTTGCTGAAAAGCATGGTTGGGAATACGAGGTTTCACTGAAATTTTGTTATCATTTACAGTTGATACGGTTTTTGAGACTTCCTATTCCTTTCACATAAGATTGGTATAGAAACAGTTTATGTTCTGTAATCTGGTCGCTAACTGTCCTGAGAACTCCTGTTGTAGGTTAAGAAGCGCCAGACGCCAATTCTTAAGGTAAAGTTATCGTTGATTAATTACTGAAACTACTCTTTCATGCTGCCCCTGTAGTCTGTTCTCAACATATTCTTGGCCAAAAAACTCCATGTTCTTTCTTCAAAAGCCAAATTGCTTTTACCACTAATTCGTATGAGTTAGGGAGGAATTTACAATTCAACCTATATGGTTTCTCTAGTTCATGAATAACAACTATGCATTTTGAAGATGATCCAAACACCTCGAGACATAATATTCCATAAAAATTTCTTGTTATTTGTATTCAGAATGTGCCGCGTTGCAAATTTGCAAACTACAAGATATTATTTATATTATTTGAGAAACGTGAGAATATGATTGGTAGATGGTAAACGGGTCAATTGAATAAGATTCACAAAGATGGATATGACCTAGGATGTACCTTAGTATTTTCTATGCAATTGTTAGGAAGAATTAGTTGTCATTCCGACATTTGAAAAAATACTCCCTAGCTTTTAAATCACCAAGTTGACTACTAAACCTTCTTCCATGCATGAAACTGTCAAGATGTATATAGCCATTCTAATGTTCTATAACTTTACGATGACTTGGATGAATTTCTTTGAAAACTGCAGGCTACAAATTGCTTATTTTCCCTTGTTTTTCGGCCCTCCTTTTTCTTTGACGGGGCCCATCATAGTGATAAGCCAGAGCCATTTACTTCTATTTCTAACTGATTGCAGGCTGCTTCTTGTGTCTAATCTTGTGCAGCCTAAGTCGTATGCGGACAACTTCAAATGGAAAGGACCACCGAAAGCTGAAGAAAATTAATTTGGAGCTTCAGGCTCTCCCTAGCGTGGAGCTGGCAGAGGAGGAAGGTGTTATGGGAGCCTGA

mRNA sequence

ATGGCGAACTCTCTGCTGCGTAGGTACAAATTCGATCGTTTGAATCGATCAGCTTTTGTTCATTGGACAAGATTGCTTTCTTCCGACTCCTTGGTTGAGTTCAAGCCAGGGGAGATCGGCATAGTATCCGGTATCCCTGAAGAGCATATCCGTCGTCGGGTTATCATCTACTCACCTGCTAGAACCGCCACACAGCAAGGCTCTGGGAAAGTTGGGAAATGGAAGATTAATTTTCTCTCTACACACAAGTGGGAAAATCCCTTGATGGGATGGACATCCACAGGAGACCCATATGCTAATGTCGGTGATGCAGCCCTTAGTTTTGATAGTGCAGAAGCTGCAATGAGGTTTGCTGAAAAGCATGGTTGGGAATACGAGGTTAAGAAGCGCCAGACGCCAATTCTTAAGAATGTGCCGCGTTGCAAATTTGCAAACTACAAGATATTATTTATATTATTTGAGAAACGTGAGAATATGATTGGTAGATGCCTAAGTCGTATGCGGACAACTTCAAATGGAAAGGACCACCGAAAGCTGAAGAAAATTAATTTGGAGCTTCAGGCTCTCCCTAGCGTGGAGCTGGCAGAGGAGGAAGGTGTTATGGGAGCCTGA

Coding sequence (CDS)

ATGGCGAACTCTCTGCTGCGTAGGTACAAATTCGATCGTTTGAATCGATCAGCTTTTGTTCATTGGACAAGATTGCTTTCTTCCGACTCCTTGGTTGAGTTCAAGCCAGGGGAGATCGGCATAGTATCCGGTATCCCTGAAGAGCATATCCGTCGTCGGGTTATCATCTACTCACCTGCTAGAACCGCCACACAGCAAGGCTCTGGGAAAGTTGGGAAATGGAAGATTAATTTTCTCTCTACACACAAGTGGGAAAATCCCTTGATGGGATGGACATCCACAGGAGACCCATATGCTAATGTCGGTGATGCAGCCCTTAGTTTTGATAGTGCAGAAGCTGCAATGAGGTTTGCTGAAAAGCATGGTTGGGAATACGAGGTTAAGAAGCGCCAGACGCCAATTCTTAAGAATGTGCCGCGTTGCAAATTTGCAAACTACAAGATATTATTTATATTATTTGAGAAACGTGAGAATATGATTGGTAGATGCCTAAGTCGTATGCGGACAACTTCAAATGGAAAGGACCACCGAAAGCTGAAGAAAATTAATTTGGAGCTTCAGGCTCTCCCTAGCGTGGAGCTGGCAGAGGAGGAAGGTGTTATGGGAGCCTGA

Protein sequence

MANSLLRRYKFDRLNRSAFVHWTRLLSSDSLVEFKPGEIGIVSGIPEEHIRRRVIIYSPARTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEKHGWEYEVKKRQTPILKNVPRCKFANYKILFILFEKRENMIGRCLSRMRTTSNGKDHRKLKKINLELQALPSVELAEEEGVMGA

Homology

[Close]

BLAST of HG10005001 vs. NCBI nr
Match: XP_038884729.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 265.8 bits (678), Expect = 3.1e-67
Identity = 131/147 (89.12%), Postives = 135/147 (91.84%), Query Frame = 0


Query: 1   MANSLLRRYKFDRLNRSAFVHWTRLLSSDSLVEFKPGEIGIVSGIPEEHIRRRVIIYSPA 60
           MANSLL RY FDR   SAFVH TRLLSSDSLVEFKPGEIG+VSGIPEEHIRRRVIIYSPA
Sbjct: 1   MANSLLGRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEIGMVSGIPEEHIRRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120

Query: 121 HGWEYEVKKRQTPILKNVPRCKFANYK 148
           HGW+YEVKKRQTPILK  P+    N+K
Sbjct: 121 HGWQYEVKKRQTPILK--PKSYADNFK 145

[Close]

BLAST of HG10005001 vs. NCBI nr
Match: XP_008444538.1 (PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucumis melo])

HSP 1 Score: 260.4 bits (664), Expect = 1.3e-65
Identity = 125/147 (85.03%), Postives = 134/147 (91.16%), Query Frame = 0


Query: 1   MANSLLRRYKFDRLNRSAFVHWTRLLSSDSLVEFKPGEIGIVSGIPEEHIRRRVIIYSPA 60
           MANSLLRRY FDR   SAFVH TRLLSSDSLVEFKPGE+G+ SGIPEEH+ RRVIIYSPA
Sbjct: 1   MANSLLRRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEVGLASGIPEEHLNRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVG+A+L+FDSAEAAMRFAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGEASLTFDSAEAAMRFAEK 120

Query: 121 HGWEYEVKKRQTPILKNVPRCKFANYK 148
           HGW+YEVKKRQTPILK  P+    N+K
Sbjct: 121 HGWQYEVKKRQTPILK--PKSYADNFK 145

[Close]

BLAST of HG10005001 vs. NCBI nr
Match: KAA0060960.1 (NADH dehydrogenase (ubiquinone) iron-sulfur protein 4 [Cucumis melo var. makuwa])

HSP 1 Score: 260.0 bits (663), Expect = 1.7e-65
Identity = 125/147 (85.03%), Postives = 134/147 (91.16%), Query Frame = 0


Query: 1   MANSLLRRYKFDRLNRSAFVHWTRLLSSDSLVEFKPGEIGIVSGIPEEHIRRRVIIYSPA 60
           MANSLLRRY FDR   SAFVH TRLLSSDSLVEFKPGEIG+ SGIPEEH+ RRVIIYSPA
Sbjct: 1   MANSLLRRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEIGLASGIPEEHLNRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVG+A+L+FDSAEAAMRFAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGEASLTFDSAEAAMRFAEK 120

Query: 121 HGWEYEVKKRQTPILKNVPRCKFANYK 148
           HGW+YEVKKRQTP+LK  P+    N+K
Sbjct: 121 HGWQYEVKKRQTPLLK--PKSYADNFK 145

[Close]

BLAST of HG10005001 vs. NCBI nr
Match: XP_022131424.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Momordica charantia])

HSP 1 Score: 258.1 bits (658), Expect = 6.5e-65
Identity = 125/147 (85.03%), Postives = 132/147 (89.80%), Query Frame = 0


Query: 1   MANSLLRRYKFDRLNRSAFVHWTRLLSSDSLVEFKPGEIGIVSGIPEEHIRRRVIIYSPA 60
           MA+SLLR Y   R +RSAFVHW RLLSSDSLVEFKP EIGIVSGIPE H+RRR+IIYSPA
Sbjct: 1   MASSLLRSYNLARSDRSAFVHWRRLLSSDSLVEFKPAEIGIVSGIPENHLRRRIIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAM FAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMAFAEK 120

Query: 121 HGWEYEVKKRQTPILKNVPRCKFANYK 148
           HGW+YEVKKRQTPILK  P+    N+K
Sbjct: 121 HGWQYEVKKRQTPILK--PKSYADNFK 145

[Close]

BLAST of HG10005001 vs. NCBI nr
Match: XP_004142898.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Cucumis sativus] >KGN62438.1 hypothetical protein Csa_018679 [Cucumis sativus])

HSP 1 Score: 258.1 bits (658), Expect = 6.5e-65
Identity = 126/147 (85.71%), Postives = 131/147 (89.12%), Query Frame = 0


Query: 1   MANSLLRRYKFDRLNRSAFVHWTRLLSSDSLVEFKPGEIGIVSGIPEEHIRRRVIIYSPA 60
           MAN LL RY FDR   SAFVH TRLLSSDSLVE KPGEIGI SGIPEEH+ RRVIIYSPA
Sbjct: 1   MANPLLHRYNFDRSRLSAFVHCTRLLSSDSLVEVKPGEIGIASGIPEEHLHRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120

Query: 121 HGWEYEVKKRQTPILKNVPRCKFANYK 148
           HGW+YEVKKRQTP+LK  P+    N+K
Sbjct: 121 HGWQYEVKKRQTPLLK--PKSYADNFK 145

[Close]

BLAST of HG10005001 vs. ExPASy Swiss-Prot
Match: Q9FJW4 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FRO1 PE=1 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.2e-45
Identity = 86/115 (74.78%), Postives = 101/115 (87.83%), Query Frame = 0


Query: 24  RLLSSDSLVE--FKPGEIGIVSGIPEEHIRRRVIIYSPARTATQQGSGKVGKWKINFLST 83
           R  ++D++VE  +K GEIG VSGIPEEH+ R+VIIYSPARTATQ GSGK+GKWKINF+ST
Sbjct: 22  RPFATDAVVESDYKRGEIGKVSGIPEEHLSRKVIIYSPARTATQSGSGKLGKWKINFVST 81

Query: 84  HKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEKHGWEYEVKKRQTPILK 137
            KWENPLMGWTSTGDPYANVGD+AL+FDS EAA  FAE+HGW+Y+VKK  TP+LK
Sbjct: 82  LKWENPLMGWTSTGDPYANVGDSALAFDSEEAAKSFAERHGWDYKVKKPNTPLLK 136

[Close]

BLAST of HG10005001 vs. ExPASy Swiss-Prot
Match: Q5XIF3 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs4 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-21
Identity = 50/112 (44.64%), Postives = 72/112 (64.29%), Query Frame = 0


Query: 23  TRLLSSDSLVEFKPGEIGIVSGIPEEHIR-RRVIIYSPARTATQQGSGKVGKWKINFLST 82
           T+L++ D  ++  P     ++G+PEEHI+ R+V I+ PAR   Q G     KWK+ F + 
Sbjct: 50  TQLITVDEKLDVTP-----LTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTR 109

Query: 83  HKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEKHGWEYEVKKRQTP 134
            +WENPLMGW ST DP +N+    L+F + E A+ FAEKHGW Y+V+ R+ P
Sbjct: 110 ERWENPLMGWASTADPLSNM---VLTFSAKEDAVAFAEKHGWSYDVEGRKVP 153

[Close]

BLAST of HG10005001 vs. ExPASy Swiss-Prot
Match: Q0MQH0 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Gorilla gorilla gorilla OX=9595 GN=NDUFS4 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.3e-20
Identity = 45/97 (46.39%), Postives = 66/97 (68.04%), Query Frame = 0


Query: 38  EIGIVSGIPEEHIR-RRVIIYSPARTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGD 97
           +I  ++G+PEEHI+ R+V I+ PAR   Q G     KWK+ F +  +WENPLMGW ST D
Sbjct: 60  DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTAD 119

Query: 98  PYANVGDAALSFDSAEAAMRFAEKHGWEYEVKKRQTP 134
           P +N+    L+F + E A+ FAEK+GW Y++++R+ P
Sbjct: 120 PLSNM---VLTFSTKEDAVSFAEKNGWSYDIEERKVP 153

[Close]

BLAST of HG10005001 vs. ExPASy Swiss-Prot
Match: O43181 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Homo sapiens OX=9606 GN=NDUFS4 PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.3e-20
Identity = 45/97 (46.39%), Postives = 66/97 (68.04%), Query Frame = 0


Query: 38  EIGIVSGIPEEHIR-RRVIIYSPARTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGD 97
           +I  ++G+PEEHI+ R+V I+ PAR   Q G     KWK+ F +  +WENPLMGW ST D
Sbjct: 60  DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTAD 119

Query: 98  PYANVGDAALSFDSAEAAMRFAEKHGWEYEVKKRQTP 134
           P +N+    L+F + E A+ FAEK+GW Y++++R+ P
Sbjct: 120 PLSNM---VLTFSTKEDAVSFAEKNGWSYDIEERKVP 153

[Close]

BLAST of HG10005001 vs. ExPASy Swiss-Prot
Match: Q02375 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Bos taurus OX=9913 GN=NDUFS4 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.0e-20
Identity = 45/97 (46.39%), Postives = 65/97 (67.01%), Query Frame = 0


Query: 38  EIGIVSGIPEEHIR-RRVIIYSPARTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGD 97
           +I  ++G+PEEHI+ R+  I+ PAR   Q G     KWK+ F +  +WENPLMGW ST D
Sbjct: 60  DITTITGVPEEHIKTRKARIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTAD 119

Query: 98  PYANVGDAALSFDSAEAAMRFAEKHGWEYEVKKRQTP 134
           P +N+    L+F + E A+ FAEK+GW Y+V++R+ P
Sbjct: 120 PLSNL---VLTFSTKEDAVAFAEKNGWSYDVEERKVP 153

[Close]

BLAST of HG10005001 vs. ExPASy TrEMBL
Match: A0A1S3BAL3 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103487828 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 6.3e-66
Identity = 125/147 (85.03%), Postives = 134/147 (91.16%), Query Frame = 0


Query: 1   MANSLLRRYKFDRLNRSAFVHWTRLLSSDSLVEFKPGEIGIVSGIPEEHIRRRVIIYSPA 60
           MANSLLRRY FDR   SAFVH TRLLSSDSLVEFKPGE+G+ SGIPEEH+ RRVIIYSPA
Sbjct: 1   MANSLLRRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEVGLASGIPEEHLNRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVG+A+L+FDSAEAAMRFAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGEASLTFDSAEAAMRFAEK 120

Query: 121 HGWEYEVKKRQTPILKNVPRCKFANYK 148
           HGW+YEVKKRQTPILK  P+    N+K
Sbjct: 121 HGWQYEVKKRQTPILK--PKSYADNFK 145

[Close]

BLAST of HG10005001 vs. ExPASy TrEMBL
Match: A0A5A7V0V4 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00940 PE=3 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 8.3e-66
Identity = 125/147 (85.03%), Postives = 134/147 (91.16%), Query Frame = 0


Query: 1   MANSLLRRYKFDRLNRSAFVHWTRLLSSDSLVEFKPGEIGIVSGIPEEHIRRRVIIYSPA 60
           MANSLLRRY FDR   SAFVH TRLLSSDSLVEFKPGEIG+ SGIPEEH+ RRVIIYSPA
Sbjct: 1   MANSLLRRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEIGLASGIPEEHLNRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVG+A+L+FDSAEAAMRFAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGEASLTFDSAEAAMRFAEK 120

Query: 121 HGWEYEVKKRQTPILKNVPRCKFANYK 148
           HGW+YEVKKRQTP+LK  P+    N+K
Sbjct: 121 HGWQYEVKKRQTPLLK--PKSYADNFK 145

[Close]

BLAST of HG10005001 vs. ExPASy TrEMBL
Match: A0A0A0LKZ2 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_2G354640 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 3.1e-65
Identity = 126/147 (85.71%), Postives = 131/147 (89.12%), Query Frame = 0


Query: 1   MANSLLRRYKFDRLNRSAFVHWTRLLSSDSLVEFKPGEIGIVSGIPEEHIRRRVIIYSPA 60
           MAN LL RY FDR   SAFVH TRLLSSDSLVE KPGEIGI SGIPEEH+ RRVIIYSPA
Sbjct: 1   MANPLLHRYNFDRSRLSAFVHCTRLLSSDSLVEVKPGEIGIASGIPEEHLHRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120

Query: 121 HGWEYEVKKRQTPILKNVPRCKFANYK 148
           HGW+YEVKKRQTP+LK  P+    N+K
Sbjct: 121 HGWQYEVKKRQTPLLK--PKSYADNFK 145

[Close]

BLAST of HG10005001 vs. ExPASy TrEMBL
Match: A0A6J1BQ75 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111004639 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 3.1e-65
Identity = 125/147 (85.03%), Postives = 132/147 (89.80%), Query Frame = 0


Query: 1   MANSLLRRYKFDRLNRSAFVHWTRLLSSDSLVEFKPGEIGIVSGIPEEHIRRRVIIYSPA 60
           MA+SLLR Y   R +RSAFVHW RLLSSDSLVEFKP EIGIVSGIPE H+RRR+IIYSPA
Sbjct: 1   MASSLLRSYNLARSDRSAFVHWRRLLSSDSLVEFKPAEIGIVSGIPENHLRRRIIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAM FAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMAFAEK 120

Query: 121 HGWEYEVKKRQTPILKNVPRCKFANYK 148
           HGW+YEVKKRQTPILK  P+    N+K
Sbjct: 121 HGWQYEVKKRQTPILK--PKSYADNFK 145

[Close]

BLAST of HG10005001 vs. ExPASy TrEMBL
Match: A0A6P9F5Z9 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Juglans regia OX=51240 GN=LOC109008146 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 3.3e-54
Identity = 107/136 (78.68%), Postives = 116/136 (85.29%), Query Frame = 0


Query: 1   MANSLLRRYKFDRLNRSAFVHWTRLLSSDSLVEFKPGEIGIVSGIPEEHIRRRVIIYSPA 60
           MA+SL R     R  RSAFV  TR LSS++LVE KP E+G+VSGIPEEH+RRRVIIYSPA
Sbjct: 1   MASSLQRSLNIARAYRSAFVPATRSLSSEALVELKPSEVGMVSGIPEEHLRRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVG+WKINFLST KWENPLMGWTSTGDPYANVG+A LSFDS EAA  FAEK
Sbjct: 61  RTATQQGSGKVGRWKINFLSTQKWENPLMGWTSTGDPYANVGEAGLSFDSEEAAKAFAEK 120

Query: 121 HGWEYEVKKRQTPILK 137
           HGWEY VKKR TP+LK
Sbjct: 121 HGWEYVVKKRHTPLLK 136

[Close]

BLAST of HG10005001 vs. TAIR 10
Match: AT5G67590.1 (NADH-ubiquinone oxidoreductase-related )

HSP 1 Score: 184.5 bits (467), Expect = 8.5e-47
Identity = 86/115 (74.78%), Postives = 101/115 (87.83%), Query Frame = 0


Query: 24  RLLSSDSLVE--FKPGEIGIVSGIPEEHIRRRVIIYSPARTATQQGSGKVGKWKINFLST 83
           R  ++D++VE  +K GEIG VSGIPEEH+ R+VIIYSPARTATQ GSGK+GKWKINF+ST
Sbjct: 22  RPFATDAVVESDYKRGEIGKVSGIPEEHLSRKVIIYSPARTATQSGSGKLGKWKINFVST 81

Query: 84  HKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEKHGWEYEVKKRQTPILK 137
            KWENPLMGWTSTGDPYANVGD+AL+FDS EAA  FAE+HGW+Y+VKK  TP+LK
Sbjct: 82  LKWENPLMGWTSTGDPYANVGDSALAFDSEEAAKSFAERHGWDYKVKKPNTPLLK 136

The following BLAST results are available for this feature:

BLAST of HG10005001 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884729.1	3.1e-67	89.12	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Benin...	[more]
XP_008444538.1	1.3e-65	85.03	PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-...	[more]
KAA0060960.1	1.7e-65	85.03	NADH dehydrogenase (ubiquinone) iron-sulfur protein 4 [Cucumis melo var. makuwa]	[more]
XP_022131424.1	6.5e-65	85.03	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Momor...	[more]
XP_004142898.1	6.5e-65	85.71	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Cucumis sa...	[more]

BLAST of HG10005001 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJW4	1.2e-45	74.78	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Arabidop...	[more]
Q5XIF3	1.2e-21	44.64	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Rattus n...	[more]
Q0MQH0	2.3e-20	46.39	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Gorilla ...	[more]
O43181	2.3e-20	46.39	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Homo sap...	[more]
Q02375	3.0e-20	46.39	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Bos taur...	[more]

BLAST of HG10005001 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BAL3	6.3e-66	85.03	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis ...	[more]
A0A5A7V0V4	8.3e-66	85.03	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis ...	[more]
A0A0A0LKZ2	3.1e-65	85.71	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis ...	[more]
A0A6J1BQ75	3.1e-65	85.03	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Momordic...	[more]
A0A6P9F5Z9	3.3e-54	78.68	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Juglans ...	[more]

BLAST of HG10005001 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67590.1	8.5e-47	74.78	NADH-ubiquinone oxidoreductase-related	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006885	NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial	PFAM	PF04800	ETC_C1_NDUFA4	coord: 53..133 e-value: 5.6E-28 score: 97.1
IPR006885	NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial	PANTHER	PTHR12219	NADH-UBIQUINONE OXIDOREDUCTASE	coord: 14..137
IPR038532	NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamily	GENE3D	3.30.160.190	atu1810 like domain	coord: 52..127 e-value: 1.0E-34 score: 120.3
None	No IPR available	PANTHER	PTHR12219:SF23	NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 4, MITOCHONDRIAL-LIKE	coord: 14..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005001.1	HG10005001.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0070469	respirasome
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H