HG10004999 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10004999
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	F-box protein
Location	Chr08: 22057926 .. 22059864 (-)
RNA-Seq Expression	HG10004999
Synteny	HG10004999

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAATCTTAGCTCCGAATTTGACGAAATGGGTTCCTTCTCCTTCACTGACTTCCCTGAAGATGTTCAGTTATGCATCCTCTCCTTCCTCTCCCCCTCTGATATAGCGACTTTCTCTTGCACATCGAAGAAATTCGTCTCTCTCTGCAGGAATGATCGGAAACTGTGGTTTACTATGTGCGATCGGAAATGGGGATCCAAGACTCAGATCAATAACTGGGGGAAAGGAAAAATCACTTACAGATTACTCTATAAAACTCTTCATCAGTGGGAGAATCTGATCGGTTTTTGGCGCCGGAGTGGCTCGTCGACCATCAGCGTCACATCGCCGCCGTTGGTGTTCTTCGAATGGGGCCCGGATTTTCTTGCTGGGTCTAGGGTTTCTCCGTCGAAGAACGGTACTTACGACGTGTTTAAGTCTCCATTTCTATGGATGGGGCTCTCTTCAGAAGGTCAGGCCATGAGTTTTATCGACCCCGATGGCCGTTCTGAGTTCGCCGGGAAATTTGCGGATTTAGGGGAATCTGATTTCTCCGACTGCGATTTGATTCCTATCGATCTGAGCTTCATGGGGAAAAATCATTTCGTCATCGAGGAAAATTTGACATTCGCTTATCCAACTTCCCCAGAACAAAGGAAAAAGGGATTCCGCCGAAGTTCAAGTTCAGCCAATTTACGGGCGGAGGACGGTGCAGCCGCCGTAACCGATGTGAACGGAGTGGAAAGTGGCTCTCCGGGAAGTTTACCAGACCGATTAATGTCAGAAATTTATCAGCATTTTGCGAATAGAACCAGTCCGGGAGCGGATAGAGCCTCAAGAAGGCAACGAAGGAGGGAGAAGGAAAGACTAGGAAAGAGGAAGTGGGAACCAGAGCATTTCGTTAAAATTGTCAATTGCTCGCCCACACCATTGCGACCATTACAGGGCTTATGGAAGGTGTTGTTTCCCTCCCTTATCTCCTTGTGTTTATGTGCCCTTTTGGAACATTTCTTTTTGTTTTCTGGGGAACTTTTGAGGTTCCAAAAGCTAGCTACTTCTTTGACCTAGCTTGATATACACAATACAACAAAATATTTAAAACAATGCTACATAAAATTGAGGATTTAATGGGTGGGAAACATACAAACCATATGATTTCAAGAAATACAGGTGGGTCTATCGAGATTTCTCTGTCTCTGTAGCTAATGTGATCTTTGTTTAGCTCTGGATATCTGTATCTTCTGAGTATTGGTATCAGAAGATTTACATTTTTGTTAACTTATTAGCTGAGCTGAATAAGGAAACATGCTCTGTTTTCTGTAAACCTGAAACAAGTTGTGTTAAGGAAACACTCCGTGAACATTTCTTATCAAGGGTTAGAGTAGAACAGCTTCATTGCGTCTGTTGATTTTGATTTCCATTCTTGGGAGTGGTACAAAAGTTCTGGTTTTGTAAGATGATATAGCATGGATGATTGGATTCCTATTTGGTCCTGCAGGGAATCAGTGATGATTTGACCATGGATTTCTATCTTGTTGTATATGATGACATTGGTGGCATTGCCTGCCGGAGAGTTGGGGACTCGTCCGAACGCCTCTCTAGTTATGCTCCCGTGTTTTGGACGTCGAATACTACATTCTTGGAAGCTCCATTCTCCCTGGAGGAAGAATATTTGCACGACTGCCGAGTACATGTCCAGCCTCTAGCAGCCAATGACATTGATGAGCTAGTGCCTTCAATTGAAAATAAAAATATTTCTCGCATTCTTTGTGTCAACTCGAGTTATGATCTAGTCCTACCAGACCTGGCTGGAAGTACTCCAAATCCTCGGAATGTGGAAGGAAGAATTTGGCAGTACAGTAATGGGACTTTTGGGTTTGGTTTCCTTAGAGATAATTTTATTATAGGCCTGAAGCACCTTGCTCGAAATGGTTCAATTCTGGATACTGTGGAATAA

mRNA sequence

ATGGCGAATCTTAGCTCCGAATTTGACGAAATGGGTTCCTTCTCCTTCACTGACTTCCCTGAAGATGTTCAGTTATGCATCCTCTCCTTCCTCTCCCCCTCTGATATAGCGACTTTCTCTTGCACATCGAAGAAATTCGTCTCTCTCTGCAGGAATGATCGGAAACTGTGGTTTACTATGTGCGATCGGAAATGGGGATCCAAGACTCAGATCAATAACTGGGGGAAAGGAAAAATCACTTACAGATTACTCTATAAAACTCTTCATCAGTGGGAGAATCTGATCGGTTTTTGGCGCCGGAGTGGCTCGTCGACCATCAGCGTCACATCGCCGCCGTTGGTGTTCTTCGAATGGGGCCCGGATTTTCTTGCTGGGTCTAGGGTTTCTCCGTCGAAGAACGGTACTTACGACGTGTTTAAGTCTCCATTTCTATGGATGGGGCTCTCTTCAGAAGGTCAGGCCATGAGTTTTATCGACCCCGATGGCCGTTCTGAGTTCGCCGGGAAATTTGCGGATTTAGGGGAATCTGATTTCTCCGACTGCGATTTGATTCCTATCGATCTGAGCTTCATGGGGAAAAATCATTTCGTCATCGAGGAAAATTTGACATTCGCTTATCCAACTTCCCCAGAACAAAGGAAAAAGGGATTCCGCCGAAGTTCAAGTTCAGCCAATTTACGGGCGGAGGACGGTGCAGCCGCCGTAACCGATGTGAACGGAGTGGAAAGTGGCTCTCCGGGAAGTTTACCAGACCGATTAATGTCAGAAATTTATCAGCATTTTGCGAATAGAACCAGTCCGGGAGCGGATAGAGCCTCAAGAAGGCAACGAAGGAGGGAGAAGGAAAGACTAGGAAAGAGGAAGTGGGAACCAGAGCATTTCGTTAAAATTGTCAATTGCTCGCCCACACCATTGCGACCATTACAGGGCTTATGGAAGCTCTGGATATCTGTATCTTCTGAGTATTGGTATCAGAAGATTTACATTTTTGTTAACTTATTAGCTGAGCTGAATAAGGAAACATGCTCTGTTTTCTGTAAACCTGAAACAAGTTGTGTTAAGGAAACACTCCGTGAACATTTCTTATCAAGGGTTAGAGTAGAACAGCTTCATTGCGGAATCAGTGATGATTTGACCATGGATTTCTATCTTGTTGTATATGATGACATTGGTGGCATTGCCTGCCGGAGAGTTGGGGACTCGTCCGAACGCCTCTCTAGTTATGCTCCCGTGTTTTGGACGTCGAATACTACATTCTTGGAAGCTCCATTCTCCCTGGAGGAAGAATATTTGCACGACTGCCGAGTACATGTCCAGCCTCTAGCAGCCAATGACATTGATGAGCTAGTGCCTTCAATTGAAAATAAAAATATTTCTCGCATTCTTTGTGTCAACTCGAGTTATGATCTAGTCCTACCAGACCTGGCTGGAAGTACTCCAAATCCTCGGAATGTGGAAGGAAGAATTTGGCAGTACAGTAATGGGACTTTTGGGTTTGGTTTCCTTAGAGATAATTTTATTATAGGCCTGAAGCACCTTGCTCGAAATGGTTCAATTCTGGATACTGTGGAATAA

Coding sequence (CDS)

ATGGCGAATCTTAGCTCCGAATTTGACGAAATGGGTTCCTTCTCCTTCACTGACTTCCCTGAAGATGTTCAGTTATGCATCCTCTCCTTCCTCTCCCCCTCTGATATAGCGACTTTCTCTTGCACATCGAAGAAATTCGTCTCTCTCTGCAGGAATGATCGGAAACTGTGGTTTACTATGTGCGATCGGAAATGGGGATCCAAGACTCAGATCAATAACTGGGGGAAAGGAAAAATCACTTACAGATTACTCTATAAAACTCTTCATCAGTGGGAGAATCTGATCGGTTTTTGGCGCCGGAGTGGCTCGTCGACCATCAGCGTCACATCGCCGCCGTTGGTGTTCTTCGAATGGGGCCCGGATTTTCTTGCTGGGTCTAGGGTTTCTCCGTCGAAGAACGGTACTTACGACGTGTTTAAGTCTCCATTTCTATGGATGGGGCTCTCTTCAGAAGGTCAGGCCATGAGTTTTATCGACCCCGATGGCCGTTCTGAGTTCGCCGGGAAATTTGCGGATTTAGGGGAATCTGATTTCTCCGACTGCGATTTGATTCCTATCGATCTGAGCTTCATGGGGAAAAATCATTTCGTCATCGAGGAAAATTTGACATTCGCTTATCCAACTTCCCCAGAACAAAGGAAAAAGGGATTCCGCCGAAGTTCAAGTTCAGCCAATTTACGGGCGGAGGACGGTGCAGCCGCCGTAACCGATGTGAACGGAGTGGAAAGTGGCTCTCCGGGAAGTTTACCAGACCGATTAATGTCAGAAATTTATCAGCATTTTGCGAATAGAACCAGTCCGGGAGCGGATAGAGCCTCAAGAAGGCAACGAAGGAGGGAGAAGGAAAGACTAGGAAAGAGGAAGTGGGAACCAGAGCATTTCGTTAAAATTGTCAATTGCTCGCCCACACCATTGCGACCATTACAGGGCTTATGGAAGCTCTGGATATCTGTATCTTCTGAGTATTGGTATCAGAAGATTTACATTTTTGTTAACTTATTAGCTGAGCTGAATAAGGAAACATGCTCTGTTTTCTGTAAACCTGAAACAAGTTGTGTTAAGGAAACACTCCGTGAACATTTCTTATCAAGGGTTAGAGTAGAACAGCTTCATTGCGGAATCAGTGATGATTTGACCATGGATTTCTATCTTGTTGTATATGATGACATTGGTGGCATTGCCTGCCGGAGAGTTGGGGACTCGTCCGAACGCCTCTCTAGTTATGCTCCCGTGTTTTGGACGTCGAATACTACATTCTTGGAAGCTCCATTCTCCCTGGAGGAAGAATATTTGCACGACTGCCGAGTACATGTCCAGCCTCTAGCAGCCAATGACATTGATGAGCTAGTGCCTTCAATTGAAAATAAAAATATTTCTCGCATTCTTTGTGTCAACTCGAGTTATGATCTAGTCCTACCAGACCTGGCTGGAAGTACTCCAAATCCTCGGAATGTGGAAGGAAGAATTTGGCAGTACAGTAATGGGACTTTTGGGTTTGGTTTCCTTAGAGATAATTTTATTATAGGCCTGAAGCACCTTGCTCGAAATGGTTCAATTCTGGATACTGTGGAATAA

Protein sequence

MANLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKKFVSLCRNDRKLWFTMCDRKWGSKTQINNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGPDFLAGSRVSPSKNGTYDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSDCDLIPIDLSFMGKNHFVIEENLTFAYPTSPEQRKKGFRRSSSSANLRAEDGAAAVTDVNGVESGSPGSLPDRLMSEIYQHFANRTSPGADRASRRQRRREKERLGKRKWEPEHFVKIVNCSPTPLRPLQGLWKLWISVSSEYWYQKIYIFVNLLAELNKETCSVFCKPETSCVKETLREHFLSRVRVEQLHCGISDDLTMDFYLVVYDDIGGIACRRVGDSSERLSSYAPVFWTSNTTFLEAPFSLEEEYLHDCRVHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSTPNPRNVEGRIWQYSNGTFGFGFLRDNFIIGLKHLARNGSILDTVE

Homology

[Close]

BLAST of HG10004999 vs. NCBI nr
Match: XP_038886422.1 (F-box protein At3g12350 [Benincasa hispida])

HSP 1 Score: 908.3 bits (2346), Expect = 3.1e-260
Identity = 449/524 (85.69%), Postives = 457/524 (87.21%), Query Frame = 0


Query: 1   MANLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKKFVSLCRNDRKLWFTM 60
           MANLSSE+DEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSK+FVSLCRNDRKLWFTM
Sbjct: 1   MANLSSEYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQINNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120
           CDRKWGSKTQINNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTIS TSPPLVFFEWGP
Sbjct: 61  CDRKWGSKTQINNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISNTSPPLVFFEWGP 120

Query: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSD 180
           DFLAGSRVSPSKNGTYDVFKSPFLW+GLSSEGQAMSFIDPDGRSEFAGKFADLG+S FSD
Sbjct: 121 DFLAGSRVSPSKNGTYDVFKSPFLWIGLSSEGQAMSFIDPDGRSEFAGKFADLGDSGFSD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLTFAYPTSPEQRKKGFRRSSSSANLRAEDGAAAVTDVNG 240
           CDLIPIDLSFMGKNHFVIEENLTFAYPTSPEQRKKGFRRSSSSANLRAEDG AAVTDVNG
Sbjct: 181 CDLIPIDLSFMGKNHFVIEENLTFAYPTSPEQRKKGFRRSSSSANLRAEDGVAAVTDVNG 240

Query: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGADRASRRQRRREKERLGKRKWEPEHFVKIVNC 300
           VESGSPGSLPDRLMSEIYQHFANRTSPG DRASRRQRRREKERLGKRKWEPEHFVKI+NC
Sbjct: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKRKWEPEHFVKIINC 300

Query: 301 SPTPLRPLQGLWKLWISVSSEYWYQKIYIFVNLLAELNKETCSVFCKPETSCVKETLREH 360
           SPTPLRPLQGLWK                                               
Sbjct: 301 SPTPLRPLQGLWK----------------------------------------------- 360

Query: 361 FLSRVRVEQLHCGISDDLTMDFYLVVYDDIGGIACRRVGDSSERLSSYAPVFWTSNTTFL 420
                       GISDDL+MDFYLVVYDDIGGIACRRVGDSSERLSSYAPVFWTSNTTFL
Sbjct: 361 ------------GISDDLSMDFYLVVYDDIGGIACRRVGDSSERLSSYAPVFWTSNTTFL 420

Query: 421 EAPFSLEEEYLHDCRVHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSTP 480
           EAPFS EEEYLHDCRVHVQPLAANDI+ELVPSIEN +ISRILCVNSSYDLVLPDLAGSTP
Sbjct: 421 EAPFSAEEEYLHDCRVHVQPLAANDIEELVPSIENNSISRILCVNSSYDLVLPDLAGSTP 465

Query: 481 NPRNVEGRIWQYSNGTFGFGFLRDNFIIGLKHLARNGSILDTVE 525
           NPRNVEGRIWQY NGTFGFGFLRDNFII LKHLARNGSILDTVE
Sbjct: 481 NPRNVEGRIWQYCNGTFGFGFLRDNFIIDLKHLARNGSILDTVE 465

[Close]

BLAST of HG10004999 vs. NCBI nr
Match: XP_004142896.1 (F-box protein At3g12350 [Cucumis sativus] >KGN62441.1 hypothetical protein Csa_018642 [Cucumis sativus])

HSP 1 Score: 887.9 bits (2293), Expect = 4.3e-254
Identity = 438/524 (83.59%), Postives = 453/524 (86.45%), Query Frame = 0


Query: 1   MANLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKKFVSLCRNDRKLWFTM 60
           MANLSS++DEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSK+FVSLCRNDRKLWFTM
Sbjct: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQINNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120
           CDRKWGSKTQI NWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP
Sbjct: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120

Query: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSD 180
           DFLAG RVSPSKNGTYDVFKSPFLWM LSSEGQAMSFI+ DGRSEFAGKFADLGESDFSD
Sbjct: 121 DFLAGCRVSPSKNGTYDVFKSPFLWMTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLTFAYPTSPEQRKKGFRRSSSSANLRAEDGAAAVTDVNG 240
           CDLIPIDLSFMGKNHFVIEENL F YPTSPE+ KKGFRRSSSSANL AEDGAAA+TDV+ 
Sbjct: 181 CDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAITDVSR 240

Query: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGADRASRRQRRREKERLGKRKWEPEHFVKIVNC 300
           VESGSPGSLPDRLMSEIYQHFANRTSPG DRASRRQRRRE+ERLGKRKWEPEHFVKIVNC
Sbjct: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKLWISVSSEYWYQKIYIFVNLLAELNKETCSVFCKPETSCVKETLREH 360
           SPTPLRPLQGLWK                                               
Sbjct: 301 SPTPLRPLQGLWK----------------------------------------------- 360

Query: 361 FLSRVRVEQLHCGISDDLTMDFYLVVYDDIGGIACRRVGDSSERLSSYAPVFWTSNTTFL 420
                       GIS+DL+MDFYLVVYDDIGGIACR+VGDSSERLSSYAPVFWTSNTTFL
Sbjct: 361 ------------GISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTTFL 420

Query: 421 EAPFSLEEEYLHDCRVHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSTP 480
           EAPFS+EEEYLHDCR+HVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGS P
Sbjct: 421 EAPFSVEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSAP 465

Query: 481 NPRNVEGRIWQYSNGTFGFGFLRDNFIIGLKHLARNGSILDTVE 525
           NPRNVEGRIWQYSNGTFGFGFLRDNFII LKHLARNG+I+DTVE
Sbjct: 481 NPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGTIVDTVE 465

[Close]

BLAST of HG10004999 vs. NCBI nr
Match: XP_008444539.1 (PREDICTED: F-box protein At3g12350 [Cucumis melo])

HSP 1 Score: 875.9 bits (2262), Expect = 1.7e-250
Identity = 435/524 (83.02%), Postives = 449/524 (85.69%), Query Frame = 0


Query: 1   MANLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKKFVSLCRNDRKLWFTM 60
           MANLSS++DEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSK+FVSLCRNDRKLWFTM
Sbjct: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQINNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120
           CDRKWGSKTQI NWGKGKITYRLLYKTLHQWENLIGFWRRSGSST SVTSPPLVFFEWGP
Sbjct: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTTSVTSPPLVFFEWGP 120

Query: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSD 180
           DFLAGSRVSPSKNGTYDVFKSPFLWM LSS GQAMSFID DGRSE AGKFA+LGESD SD
Sbjct: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMTLSSAGQAMSFIDLDGRSELAGKFANLGESDLSD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLTFAYPTSPEQRKKGFRRSSSSANLRAEDGAAAVTDVNG 240
            DLIPIDLSFMGKNHFVIEENL F YPTSPE+ KKGFRRSSSSANL AEDGAAAVTDV+ 
Sbjct: 181 SDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAVTDVSR 240

Query: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGADRASRRQRRREKERLGKRKWEPEHFVKIVNC 300
           VESGSPGSLPDRLMSEIYQHFANRTSPG DRASRRQRRRE+ERLGKRKWEPEHFVKIVNC
Sbjct: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKLWISVSSEYWYQKIYIFVNLLAELNKETCSVFCKPETSCVKETLREH 360
           SPTPLRPLQGLWK                                               
Sbjct: 301 SPTPLRPLQGLWK----------------------------------------------- 360

Query: 361 FLSRVRVEQLHCGISDDLTMDFYLVVYDDIGGIACRRVGDSSERLSSYAPVFWTSNTTFL 420
                       GIS+DL+MDFYLVVYDDIGGIACR+VGDSSERLSSYAPVFWTSNT+FL
Sbjct: 361 ------------GISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTSFL 420

Query: 421 EAPFSLEEEYLHDCRVHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSTP 480
           EAPFS+EEE LHDCR+HVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSTP
Sbjct: 421 EAPFSVEEENLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSTP 465

Query: 481 NPRNVEGRIWQYSNGTFGFGFLRDNFIIGLKHLARNGSILDTVE 525
           NPRNVEGRIWQYSNGTFGFGFLRDNFII LKHLARNGSI+DTVE
Sbjct: 481 NPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSIMDTVE 465

[Close]

BLAST of HG10004999 vs. NCBI nr
Match: KAA0060958.1 (F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 874.8 bits (2259), Expect = 3.8e-250
Identity = 434/524 (82.82%), Postives = 449/524 (85.69%), Query Frame = 0


Query: 1   MANLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKKFVSLCRNDRKLWFTM 60
           MANLSS++DEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSK+FVSLCRNDRKLWFTM
Sbjct: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQINNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120
           CDRKWGSKTQI NWGKGKITYRLLYKTLHQWENLIGFWRRSGSST SVTSPPLVFFEWGP
Sbjct: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTTSVTSPPLVFFEWGP 120

Query: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSD 180
           DFLAGSRVSPSKNGTYDVFKSPFLW+ LSS GQAMSFID DGRSE AGKFA+LGESD SD
Sbjct: 121 DFLAGSRVSPSKNGTYDVFKSPFLWLTLSSAGQAMSFIDLDGRSELAGKFANLGESDLSD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLTFAYPTSPEQRKKGFRRSSSSANLRAEDGAAAVTDVNG 240
            DLIPIDLSFMGKNHFVIEENL F YPTSPE+ KKGFRRSSSSANL AEDGAAAVTDV+ 
Sbjct: 181 SDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAVTDVSR 240

Query: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGADRASRRQRRREKERLGKRKWEPEHFVKIVNC 300
           VESGSPGSLPDRLMSEIYQHFANRTSPG DRASRRQRRRE+ERLGKRKWEPEHFVKIVNC
Sbjct: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKLWISVSSEYWYQKIYIFVNLLAELNKETCSVFCKPETSCVKETLREH 360
           SPTPLRPLQGLWK                                               
Sbjct: 301 SPTPLRPLQGLWK----------------------------------------------- 360

Query: 361 FLSRVRVEQLHCGISDDLTMDFYLVVYDDIGGIACRRVGDSSERLSSYAPVFWTSNTTFL 420
                       GIS+DL+MDFYLVVYDDIGGIACR+VGDSSERLSSYAPVFWTSNT+FL
Sbjct: 361 ------------GISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTSFL 420

Query: 421 EAPFSLEEEYLHDCRVHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSTP 480
           EAPFS+EEE LHDCR+HVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSTP
Sbjct: 421 EAPFSVEEENLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSTP 465

Query: 481 NPRNVEGRIWQYSNGTFGFGFLRDNFIIGLKHLARNGSILDTVE 525
           NPRNVEGRIWQYSNGTFGFGFLRDNFII LKHLARNGSI+DTVE
Sbjct: 481 NPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSIMDTVE 465

[Close]

BLAST of HG10004999 vs. NCBI nr
Match: XP_022131422.1 (F-box protein At3g12350 [Momordica charantia] >XP_022131423.1 F-box protein At3g12350 [Momordica charantia])

HSP 1 Score: 857.4 bits (2214), Expect = 6.2e-245
Identity = 422/524 (80.53%), Postives = 439/524 (83.78%), Query Frame = 0


Query: 1   MANLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKKFVSLCRNDRKLWFTM 60
           M NLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSK+FVSLCRNDRKLWFTM
Sbjct: 1   MVNLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQINNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120
           CDR+WGSKTQI NWGKG I YRLLYKTLHQWENLIGFWRRSG STI V+SPPLVFFEWGP
Sbjct: 61  CDRRWGSKTQIKNWGKGNIAYRLLYKTLHQWENLIGFWRRSGPSTIGVSSPPLVFFEWGP 120

Query: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSD 180
           DFLAGSRVSPSKNGTY V KSPFLWMGLS EGQ M+FIDPDGRSEF+GKFAD GE   SD
Sbjct: 121 DFLAGSRVSPSKNGTYSVIKSPFLWMGLSPEGQVMNFIDPDGRSEFSGKFADWGE---SD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLTFAYPTSPEQRKKGFRRSSSSANLRAEDGAAAVTDVNG 240
           CDL+PID+SFMGKNHFVIEENLTFAYP SPEQ KKGFRRSSSSANLRAED  AA TDVNG
Sbjct: 181 CDLVPIDVSFMGKNHFVIEENLTFAYPNSPEQGKKGFRRSSSSANLRAEDAVAATTDVNG 240

Query: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGADRASRRQRRREKERLGKRKWEPEHFVKIVNC 300
           VE GSPGSLPDRLMSEIYQHFANRTSPG DRASRRQRRREKERLGKRKWEPEHFVKIVNC
Sbjct: 241 VEIGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKRKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKLWISVSSEYWYQKIYIFVNLLAELNKETCSVFCKPETSCVKETLREH 360
           SPTP RPLQGLWK                                               
Sbjct: 301 SPTPSRPLQGLWK----------------------------------------------- 360

Query: 361 FLSRVRVEQLHCGISDDLTMDFYLVVYDDIGGIACRRVGDSSERLSSYAPVFWTSNTTFL 420
                       GISDD++MDFYLVVYDDIGGIACRRVGDSSE++SSYAPVFWTSN TFL
Sbjct: 361 ------------GISDDMSMDFYLVVYDDIGGIACRRVGDSSEQVSSYAPVFWTSNPTFL 420

Query: 421 EAPFSLEEEYLHDCRVHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSTP 480
           E+PFSL EEYLHDCR+HV+PLAANDIDELVPSIENK ISRILCVNSSYDLVLPDLAGSTP
Sbjct: 421 ESPFSLVEEYLHDCRIHVRPLAANDIDELVPSIENKTISRILCVNSSYDLVLPDLAGSTP 462

Query: 481 NPRNVEGRIWQYSNGTFGFGFLRDNFIIGLKHLARNGSILDTVE 525
           NPRNVEGRIW+YSNGTFGFGFLRDNFII LKH+A+NGSILDTVE
Sbjct: 481 NPRNVEGRIWEYSNGTFGFGFLRDNFIIDLKHIAQNGSILDTVE 462

[Close]

BLAST of HG10004999 vs. ExPASy Swiss-Prot
Match: Q84WW1 (F-box protein At3g12350 OS=Arabidopsis thaliana OX=3702 GN=At3g12350 PE=2 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 5.7e-100
Identity = 216/512 (42.19%), Postives = 286/512 (55.86%), Query Frame = 0


Query: 16  FTDFPEDVQLCILSFLSPSDIATFSCTSKKFVSLCRNDRKLWFTMCDRKWGSKTQINNWG 75
           F + PED+QL ILS L+P++I++F+CTSK+F SLC+ D K+W  MCD++WG KT+I  W 
Sbjct: 8   FCEIPEDLQLRILSLLTPAEISSFACTSKRFASLCQEDGKIWHVMCDQRWGKKTKIQKWA 67

Query: 76  KGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGPDFLAGSRVSPSKNGT 135
            G+I YR LYKTL   ENLIGFWR  G +  + +SPPLVFF+WG  F+ GSRV  + + T
Sbjct: 68  NGQIPYRHLYKTLKGLENLIGFWRLCGRANPAASSPPLVFFDWGSSFILGSRVLSTGDDT 127

Query: 136 YDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSDCDLIPIDLSFMGKNH 195
           Y+V K+PFL MG+S EG++ +F+D  G         DL E + S+ +L+ +D++FMG  H
Sbjct: 128 YEVKKTPFLLMGISPEGRSENFLDLVG-GNLRSVDDDLKELEASN-NLVSVDVNFMGNGH 187

Query: 196 FVIEENLTFAYPTSPEQRKKGFRRSSSSANLRAEDGAAAVTDVNGVESGSPGSLPDRLMS 255
            ++EEN  F                  + N R ED  +     +G ES    S P+   S
Sbjct: 188 IMVEENRCF------------------TNNNRREDQRS-----SGDESDDLISSPN--FS 247

Query: 256 EIYQHFANRTSPGADRASRRQRRREKERLGKR-KWEPEHFVKIVNCSPTPLRPLQGLWKL 315
           E+Y   AN+TSPG DR  RRQ+R+EKER   R KWEPEHF+K+ +CSPTP RPLQGLWK 
Sbjct: 248 EMYTQLANKTSPGGDR--RRQKRKEKERQASRTKWEPEHFLKVADCSPTPTRPLQGLWK- 307

Query: 316 WISVSSEYWYQKIYIFVNLLAELNKETCSVFCKPETSCVKETLREHFLSRVRVEQLHCGI 375
                                         FC+                           
Sbjct: 308 -----------------------------GFCEG-------------------------- 367

Query: 376 SDDLTMDFYLVVYDDIGGIACRRVGDSSERLSSYA-PVFWTSNTTFLEAPFSLEEEYLHD 435
               +++ YLV YD++GGI CR+V D S  LS Y  PVFWT   TF+ +PFS EEE L +
Sbjct: 368 ----SIELYLVKYDEVGGIICRKVEDLS--LSRYTPPVFWTPKHTFIRSPFSAEEELLLN 419

Query: 436 CRVHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSTPNPRNVEGRIWQYS 495
            R+H+ P A          +    +S +L + SS DLVLP   G+       EGR+W Y 
Sbjct: 428 SRIHISPFA---------EVHENVVSGMLYMKSSCDLVLPGEPGNGIGFLRGEGRVWLYD 419

Query: 496 NGTFGFGFLRDNFIIGLKHLA-RNGSILDTVE 525
           NGTFGFGFLRD FII LK +A  +G + D VE
Sbjct: 488 NGTFGFGFLRDQFIIDLKRVALEDGCLADEVE 419

[Close]

BLAST of HG10004999 vs. ExPASy TrEMBL
Match: A0A0A0LR36 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G354670 PE=4 SV=1)

HSP 1 Score: 887.9 bits (2293), Expect = 2.1e-254
Identity = 438/524 (83.59%), Postives = 453/524 (86.45%), Query Frame = 0


Query: 1   MANLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKKFVSLCRNDRKLWFTM 60
           MANLSS++DEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSK+FVSLCRNDRKLWFTM
Sbjct: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQINNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120
           CDRKWGSKTQI NWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP
Sbjct: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120

Query: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSD 180
           DFLAG RVSPSKNGTYDVFKSPFLWM LSSEGQAMSFI+ DGRSEFAGKFADLGESDFSD
Sbjct: 121 DFLAGCRVSPSKNGTYDVFKSPFLWMTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLTFAYPTSPEQRKKGFRRSSSSANLRAEDGAAAVTDVNG 240
           CDLIPIDLSFMGKNHFVIEENL F YPTSPE+ KKGFRRSSSSANL AEDGAAA+TDV+ 
Sbjct: 181 CDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAITDVSR 240

Query: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGADRASRRQRRREKERLGKRKWEPEHFVKIVNC 300
           VESGSPGSLPDRLMSEIYQHFANRTSPG DRASRRQRRRE+ERLGKRKWEPEHFVKIVNC
Sbjct: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKLWISVSSEYWYQKIYIFVNLLAELNKETCSVFCKPETSCVKETLREH 360
           SPTPLRPLQGLWK                                               
Sbjct: 301 SPTPLRPLQGLWK----------------------------------------------- 360

Query: 361 FLSRVRVEQLHCGISDDLTMDFYLVVYDDIGGIACRRVGDSSERLSSYAPVFWTSNTTFL 420
                       GIS+DL+MDFYLVVYDDIGGIACR+VGDSSERLSSYAPVFWTSNTTFL
Sbjct: 361 ------------GISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTTFL 420

Query: 421 EAPFSLEEEYLHDCRVHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSTP 480
           EAPFS+EEEYLHDCR+HVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGS P
Sbjct: 421 EAPFSVEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSAP 465

Query: 481 NPRNVEGRIWQYSNGTFGFGFLRDNFIIGLKHLARNGSILDTVE 525
           NPRNVEGRIWQYSNGTFGFGFLRDNFII LKHLARNG+I+DTVE
Sbjct: 481 NPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGTIVDTVE 465

[Close]

BLAST of HG10004999 vs. ExPASy TrEMBL
Match: A0A1S3BBA8 (F-box protein At3g12350 OS=Cucumis melo OX=3656 GN=LOC103487829 PE=4 SV=1)

HSP 1 Score: 875.9 bits (2262), Expect = 8.2e-251
Identity = 435/524 (83.02%), Postives = 449/524 (85.69%), Query Frame = 0


Query: 1   MANLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKKFVSLCRNDRKLWFTM 60
           MANLSS++DEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSK+FVSLCRNDRKLWFTM
Sbjct: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQINNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120
           CDRKWGSKTQI NWGKGKITYRLLYKTLHQWENLIGFWRRSGSST SVTSPPLVFFEWGP
Sbjct: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTTSVTSPPLVFFEWGP 120

Query: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSD 180
           DFLAGSRVSPSKNGTYDVFKSPFLWM LSS GQAMSFID DGRSE AGKFA+LGESD SD
Sbjct: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMTLSSAGQAMSFIDLDGRSELAGKFANLGESDLSD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLTFAYPTSPEQRKKGFRRSSSSANLRAEDGAAAVTDVNG 240
            DLIPIDLSFMGKNHFVIEENL F YPTSPE+ KKGFRRSSSSANL AEDGAAAVTDV+ 
Sbjct: 181 SDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAVTDVSR 240

Query: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGADRASRRQRRREKERLGKRKWEPEHFVKIVNC 300
           VESGSPGSLPDRLMSEIYQHFANRTSPG DRASRRQRRRE+ERLGKRKWEPEHFVKIVNC
Sbjct: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKLWISVSSEYWYQKIYIFVNLLAELNKETCSVFCKPETSCVKETLREH 360
           SPTPLRPLQGLWK                                               
Sbjct: 301 SPTPLRPLQGLWK----------------------------------------------- 360

Query: 361 FLSRVRVEQLHCGISDDLTMDFYLVVYDDIGGIACRRVGDSSERLSSYAPVFWTSNTTFL 420
                       GIS+DL+MDFYLVVYDDIGGIACR+VGDSSERLSSYAPVFWTSNT+FL
Sbjct: 361 ------------GISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTSFL 420

Query: 421 EAPFSLEEEYLHDCRVHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSTP 480
           EAPFS+EEE LHDCR+HVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSTP
Sbjct: 421 EAPFSVEEENLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSTP 465

Query: 481 NPRNVEGRIWQYSNGTFGFGFLRDNFIIGLKHLARNGSILDTVE 525
           NPRNVEGRIWQYSNGTFGFGFLRDNFII LKHLARNGSI+DTVE
Sbjct: 481 NPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSIMDTVE 465

[Close]

BLAST of HG10004999 vs. ExPASy TrEMBL
Match: A0A5A7V081 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00920 PE=4 SV=1)

HSP 1 Score: 874.8 bits (2259), Expect = 1.8e-250
Identity = 434/524 (82.82%), Postives = 449/524 (85.69%), Query Frame = 0


Query: 1   MANLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKKFVSLCRNDRKLWFTM 60
           MANLSS++DEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSK+FVSLCRNDRKLWFTM
Sbjct: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQINNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120
           CDRKWGSKTQI NWGKGKITYRLLYKTLHQWENLIGFWRRSGSST SVTSPPLVFFEWGP
Sbjct: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTTSVTSPPLVFFEWGP 120

Query: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSD 180
           DFLAGSRVSPSKNGTYDVFKSPFLW+ LSS GQAMSFID DGRSE AGKFA+LGESD SD
Sbjct: 121 DFLAGSRVSPSKNGTYDVFKSPFLWLTLSSAGQAMSFIDLDGRSELAGKFANLGESDLSD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLTFAYPTSPEQRKKGFRRSSSSANLRAEDGAAAVTDVNG 240
            DLIPIDLSFMGKNHFVIEENL F YPTSPE+ KKGFRRSSSSANL AEDGAAAVTDV+ 
Sbjct: 181 SDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAVTDVSR 240

Query: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGADRASRRQRRREKERLGKRKWEPEHFVKIVNC 300
           VESGSPGSLPDRLMSEIYQHFANRTSPG DRASRRQRRRE+ERLGKRKWEPEHFVKIVNC
Sbjct: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKLWISVSSEYWYQKIYIFVNLLAELNKETCSVFCKPETSCVKETLREH 360
           SPTPLRPLQGLWK                                               
Sbjct: 301 SPTPLRPLQGLWK----------------------------------------------- 360

Query: 361 FLSRVRVEQLHCGISDDLTMDFYLVVYDDIGGIACRRVGDSSERLSSYAPVFWTSNTTFL 420
                       GIS+DL+MDFYLVVYDDIGGIACR+VGDSSERLSSYAPVFWTSNT+FL
Sbjct: 361 ------------GISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTSFL 420

Query: 421 EAPFSLEEEYLHDCRVHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSTP 480
           EAPFS+EEE LHDCR+HVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSTP
Sbjct: 421 EAPFSVEEENLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSTP 465

Query: 481 NPRNVEGRIWQYSNGTFGFGFLRDNFIIGLKHLARNGSILDTVE 525
           NPRNVEGRIWQYSNGTFGFGFLRDNFII LKHLARNGSI+DTVE
Sbjct: 481 NPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSIMDTVE 465

[Close]

BLAST of HG10004999 vs. ExPASy TrEMBL
Match: A0A6J1BQZ2 (F-box protein At3g12350 OS=Momordica charantia OX=3673 GN=LOC111004638 PE=4 SV=1)

HSP 1 Score: 857.4 bits (2214), Expect = 3.0e-245
Identity = 422/524 (80.53%), Postives = 439/524 (83.78%), Query Frame = 0


Query: 1   MANLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKKFVSLCRNDRKLWFTM 60
           M NLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSK+FVSLCRNDRKLWFTM
Sbjct: 1   MVNLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQINNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120
           CDR+WGSKTQI NWGKG I YRLLYKTLHQWENLIGFWRRSG STI V+SPPLVFFEWGP
Sbjct: 61  CDRRWGSKTQIKNWGKGNIAYRLLYKTLHQWENLIGFWRRSGPSTIGVSSPPLVFFEWGP 120

Query: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSD 180
           DFLAGSRVSPSKNGTY V KSPFLWMGLS EGQ M+FIDPDGRSEF+GKFAD GE   SD
Sbjct: 121 DFLAGSRVSPSKNGTYSVIKSPFLWMGLSPEGQVMNFIDPDGRSEFSGKFADWGE---SD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLTFAYPTSPEQRKKGFRRSSSSANLRAEDGAAAVTDVNG 240
           CDL+PID+SFMGKNHFVIEENLTFAYP SPEQ KKGFRRSSSSANLRAED  AA TDVNG
Sbjct: 181 CDLVPIDVSFMGKNHFVIEENLTFAYPNSPEQGKKGFRRSSSSANLRAEDAVAATTDVNG 240

Query: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGADRASRRQRRREKERLGKRKWEPEHFVKIVNC 300
           VE GSPGSLPDRLMSEIYQHFANRTSPG DRASRRQRRREKERLGKRKWEPEHFVKIVNC
Sbjct: 241 VEIGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKRKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKLWISVSSEYWYQKIYIFVNLLAELNKETCSVFCKPETSCVKETLREH 360
           SPTP RPLQGLWK                                               
Sbjct: 301 SPTPSRPLQGLWK----------------------------------------------- 360

Query: 361 FLSRVRVEQLHCGISDDLTMDFYLVVYDDIGGIACRRVGDSSERLSSYAPVFWTSNTTFL 420
                       GISDD++MDFYLVVYDDIGGIACRRVGDSSE++SSYAPVFWTSN TFL
Sbjct: 361 ------------GISDDMSMDFYLVVYDDIGGIACRRVGDSSEQVSSYAPVFWTSNPTFL 420

Query: 421 EAPFSLEEEYLHDCRVHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSTP 480
           E+PFSL EEYLHDCR+HV+PLAANDIDELVPSIENK ISRILCVNSSYDLVLPDLAGSTP
Sbjct: 421 ESPFSLVEEYLHDCRIHVRPLAANDIDELVPSIENKTISRILCVNSSYDLVLPDLAGSTP 462

Query: 481 NPRNVEGRIWQYSNGTFGFGFLRDNFIIGLKHLARNGSILDTVE 525
           NPRNVEGRIW+YSNGTFGFGFLRDNFII LKH+A+NGSILDTVE
Sbjct: 481 NPRNVEGRIWEYSNGTFGFGFLRDNFIIDLKHIAQNGSILDTVE 462

[Close]

BLAST of HG10004999 vs. ExPASy TrEMBL
Match: A0A6J1KA40 (F-box protein At3g12350-like OS=Cucurbita maxima OX=3661 GN=LOC111492477 PE=4 SV=1)

HSP 1 Score: 814.3 bits (2102), Expect = 2.9e-232
Identity = 410/524 (78.24%), Postives = 423/524 (80.73%), Query Frame = 0


Query: 1   MANLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKKFVSLCRNDRKLWFTM 60
           MANLSSE DE+GSFSFTDFPEDVQLCILSFLSPSDIA+FSCTSK+FVSLCRNDRKLWFTM
Sbjct: 1   MANLSSEIDEIGSFSFTDFPEDVQLCILSFLSPSDIASFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQINNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120
           CDR+WGS TQINNWGKGKI YRLLYKTLHQWENLIGFWRRSGS TI V+SPPLVFFEWGP
Sbjct: 61  CDRRWGSTTQINNWGKGKIAYRLLYKTLHQWENLIGFWRRSGSPTIGVSSPPLVFFEWGP 120

Query: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSD 180
           DFLAGSRVSPSKNGTYDVFKSPFLWMGLS E QAMSFIDPDGRS FAGKF DLGESDFSD
Sbjct: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMGLSPEAQAMSFIDPDGRSGFAGKFGDLGESDFSD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLTFAYPTSPEQRKKGFRRSSSSANLRAEDGAAAVTDVNG 240
           CDLIPI+LSFMG NHF IEENLT AYP SPE+R  G RRSS       ED  AAVTDVN 
Sbjct: 181 CDLIPIELSFMGTNHFSIEENLTLAYPNSPERRINGCRRSS------PEDSLAAVTDVNV 240

Query: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGADRASRRQRRREKERLGKRKWEPEHFVKIVNC 300
           V SGSPGSL D LMSEIYQ FANRTSPG DRASRRQRRREKERLGKRK E EHFVKIVNC
Sbjct: 241 VGSGSPGSLLDGLMSEIYQQFANRTSPGGDRASRRQRRREKERLGKRKLEAEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKLWISVSSEYWYQKIYIFVNLLAELNKETCSVFCKPETSCVKETLREH 360
           SPTPLRP+QGLWK                                               
Sbjct: 301 SPTPLRPIQGLWK----------------------------------------------- 360

Query: 361 FLSRVRVEQLHCGISDDLTMDFYLVVYDDIGGIACRRVGDSSERLSSYAPVFWTSNTTFL 420
                       GISDD+ MDFYLVVYDDIGGIACRRVGDSSE LSSY+PVFWTSNTTFL
Sbjct: 361 ------------GISDDMRMDFYLVVYDDIGGIACRRVGDSSEGLSSYSPVFWTSNTTFL 420

Query: 421 EAPFSLEEEYLHDCRVHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSTP 480
           EAPFSLEEE+ HDCR+HV PL ANDIDELVPSIENK ISRIL VNSSYDLVLPDLAGS P
Sbjct: 421 EAPFSLEEEHFHDCRIHVHPLPANDIDELVPSIENKRISRILRVNSSYDLVLPDLAGSVP 459

Query: 481 NPRNVEGRIWQYSNGTFGFGFLRDNFIIGLKHLARNGSILDTVE 525
           NPRNVEGRIWQYSNGTFGFGFLRDNFII LKH+ARNGSILDTVE
Sbjct: 481 NPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHIARNGSILDTVE 459

[Close]

BLAST of HG10004999 vs. TAIR 10
Match: AT3G12350.1 (F-box family protein )

HSP 1 Score: 366.3 bits (939), Expect = 4.1e-101
Identity = 216/512 (42.19%), Postives = 286/512 (55.86%), Query Frame = 0


Query: 16  FTDFPEDVQLCILSFLSPSDIATFSCTSKKFVSLCRNDRKLWFTMCDRKWGSKTQINNWG 75
           F + PED+QL ILS L+P++I++F+CTSK+F SLC+ D K+W  MCD++WG KT+I  W 
Sbjct: 8   FCEIPEDLQLRILSLLTPAEISSFACTSKRFASLCQEDGKIWHVMCDQRWGKKTKIQKWA 67

Query: 76  KGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGPDFLAGSRVSPSKNGT 135
            G+I YR LYKTL   ENLIGFWR  G +  + +SPPLVFF+WG  F+ GSRV  + + T
Sbjct: 68  NGQIPYRHLYKTLKGLENLIGFWRLCGRANPAASSPPLVFFDWGSSFILGSRVLSTGDDT 127

Query: 136 YDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSDCDLIPIDLSFMGKNH 195
           Y+V K+PFL MG+S EG++ +F+D  G         DL E + S+ +L+ +D++FMG  H
Sbjct: 128 YEVKKTPFLLMGISPEGRSENFLDLVG-GNLRSVDDDLKELEASN-NLVSVDVNFMGNGH 187

Query: 196 FVIEENLTFAYPTSPEQRKKGFRRSSSSANLRAEDGAAAVTDVNGVESGSPGSLPDRLMS 255
            ++EEN  F                  + N R ED  +     +G ES    S P+   S
Sbjct: 188 IMVEENRCF------------------TNNNRREDQRS-----SGDESDDLISSPN--FS 247

Query: 256 EIYQHFANRTSPGADRASRRQRRREKERLGKR-KWEPEHFVKIVNCSPTPLRPLQGLWKL 315
           E+Y   AN+TSPG DR  RRQ+R+EKER   R KWEPEHF+K+ +CSPTP RPLQGLWK 
Sbjct: 248 EMYTQLANKTSPGGDR--RRQKRKEKERQASRTKWEPEHFLKVADCSPTPTRPLQGLWK- 307

Query: 316 WISVSSEYWYQKIYIFVNLLAELNKETCSVFCKPETSCVKETLREHFLSRVRVEQLHCGI 375
                                         FC+                           
Sbjct: 308 -----------------------------GFCEG-------------------------- 367

Query: 376 SDDLTMDFYLVVYDDIGGIACRRVGDSSERLSSYA-PVFWTSNTTFLEAPFSLEEEYLHD 435
               +++ YLV YD++GGI CR+V D S  LS Y  PVFWT   TF+ +PFS EEE L +
Sbjct: 368 ----SIELYLVKYDEVGGIICRKVEDLS--LSRYTPPVFWTPKHTFIRSPFSAEEELLLN 419

Query: 436 CRVHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSTPNPRNVEGRIWQYS 495
            R+H+ P A          +    +S +L + SS DLVLP   G+       EGR+W Y 
Sbjct: 428 SRIHISPFA---------EVHENVVSGMLYMKSSCDLVLPGEPGNGIGFLRGEGRVWLYD 419

Query: 496 NGTFGFGFLRDNFIIGLKHLA-RNGSILDTVE 525
           NGTFGFGFLRD FII LK +A  +G + D VE
Sbjct: 488 NGTFGFGFLRDQFIIDLKRVALEDGCLADEVE 419

[Close]

BLAST of HG10004999 vs. TAIR 10
Match: AT3G12350.2 (F-box family protein )

HSP 1 Score: 269.2 bits (687), Expect = 6.8e-72
Identity = 145/302 (48.01%), Postives = 195/302 (64.57%), Query Frame = 0


Query: 16  FTDFPEDVQLCILSFLSPSDIATFSCTSKKFVSLCRNDRKLWFTMCDRKWGSKTQINNWG 75
           F + PED+QL ILS L+P++I++F+CTSK+F SLC+ D K+W  MCD++WG KT+I  W 
Sbjct: 8   FCEIPEDLQLRILSLLTPAEISSFACTSKRFASLCQEDGKIWHVMCDQRWGKKTKIQKWA 67

Query: 76  KGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGPDFLAGSRVSPSKNGT 135
            G+I YR LYKTL   ENLIGFWR  G +  + +SPPLVFF+WG  F+ GSRV  + + T
Sbjct: 68  NGQIPYRHLYKTLKGLENLIGFWRLCGRANPAASSPPLVFFDWGSSFILGSRVLSTGDDT 127

Query: 136 YDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSDCDLIPIDLSFMGKNH 195
           Y+V K+PFL MG+S EG++ +F+D  G         DL E + S+ +L+ +D++FMG  H
Sbjct: 128 YEVKKTPFLLMGISPEGRSENFLDLVG-GNLRSVDDDLKELEASN-NLVSVDVNFMGNGH 187

Query: 196 FVIEENLTFAYPTSPEQRKKGFRRSSSSANLRAEDGAAAVTDVNGVESGSPGSLPDRLMS 255
            ++EEN  F                  + N R ED  +     +G ES    S P+   S
Sbjct: 188 IMVEENRCF------------------TNNNRREDQRS-----SGDESDDLISSPN--FS 247

Query: 256 EIYQHFANRTSPGADRASRRQRRREKERLGKR-KWEPEHFVKIVNCSPTPLRPLQGLWKL 315
           E+Y   AN+TSPG DR  RRQ+R+EKER   R KWEPEHF+K+ +CSPTP RPLQGLWK+
Sbjct: 248 EMYTQLANKTSPGGDR--RRQKRKEKERQASRTKWEPEHFLKVADCSPTPTRPLQGLWKV 280

Query: 316 WI 317
            I
Sbjct: 308 SI 280

The following BLAST results are available for this feature:

BLAST of HG10004999 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886422.1	3.1e-260	85.69	F-box protein At3g12350 [Benincasa hispida]	[more]
XP_004142896.1	4.3e-254	83.59	F-box protein At3g12350 [Cucumis sativus] >KGN62441.1 hypothetical protein Csa_0...	[more]
XP_008444539.1	1.7e-250	83.02	PREDICTED: F-box protein At3g12350 [Cucumis melo]	[more]
KAA0060958.1	3.8e-250	82.82	F-box protein [Cucumis melo var. makuwa]	[more]
XP_022131422.1	6.2e-245	80.53	F-box protein At3g12350 [Momordica charantia] >XP_022131423.1 F-box protein At3g...	[more]

BLAST of HG10004999 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84WW1	5.7e-100	42.19	F-box protein At3g12350 OS=Arabidopsis thaliana OX=3702 GN=At3g12350 PE=2 SV=1	[more]

BLAST of HG10004999 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LR36	2.1e-254	83.59	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G354670 PE=4 ...	[more]
A0A1S3BBA8	8.2e-251	83.02	F-box protein At3g12350 OS=Cucumis melo OX=3656 GN=LOC103487829 PE=4 SV=1	[more]
A0A5A7V081	1.8e-250	82.82	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00920 ...	[more]
A0A6J1BQZ2	3.0e-245	80.53	F-box protein At3g12350 OS=Momordica charantia OX=3673 GN=LOC111004638 PE=4 SV=1	[more]
A0A6J1KA40	2.9e-232	78.24	F-box protein At3g12350-like OS=Cucurbita maxima OX=3661 GN=LOC111492477 PE=4 SV...	[more]

BLAST of HG10004999 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12350.1	4.1e-101	42.19	F-box family protein	[more]
AT3G12350.2	6.8e-72	48.01	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 19..60 e-value: 1.3E-5 score: 34.6
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 14..55 e-value: 1.3E-7 score: 31.3
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 13..60 score: 11.325583
None	No IPR available	GENE3D	1.20.1280.50		coord: 5..93 e-value: 6.8E-9 score: 37.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..285
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 9..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10004999.1	HG10004999.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding