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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCGAGCCGTTCAGTGAACAACCTCATGTGCAAGGATGACTTGAGAAGAGCTTACAGAGAGAAAGCTGGGAGATCAAGAAGACGCGTCAAAGTCCGTGACATCATCGACATCTTAGACATCATCGTACCTGTCATCCCCCACTTCTTTGGAGGCCGTATCATCGGCGGCGGTGTTAATTGCAGTGCCGGCCCCGACAACTACAACAACAACATGGGTGGTGGTTATGGTCGTGAGGATGACATGCCTTTCCGCTGTGGCAATAATGGCGGCGGCCGCTTTGGCCTTGTTGGCATGGCTTCTGGTGATTACGGCAGTGAGAGCGGGCATTACGGCCATGGAAATGCTAACCATAATGCTCACCACGGGATGAGAATGGCTCGTGCTGAGGACTATGGCGATCGTGAAATTTCAGAGGAAGAGTTTGAGAGGCTCCTTGAGTATGCCGAGCAGTGCAATGTTGTCAAGATGTACTGA mRNA sequence ATGGCGAGCCGTTCAGTGAACAACCTCATGTGCAAGGATGACTTGAGAAGAGCTTACAGAGAGAAAGCTGGGAGATCAAGAAGACGCGTCAAAGTCCGTGACATCATCGACATCTTAGACATCATCGTACCTGTCATCCCCCACTTCTTTGGAGGCCGTATCATCGGCGGCGGTGTTAATTGCAGTGCCGGCCCCGACAACTACAACAACAACATGGGTGGTGGTTATGGTCGTGAGGATGACATGCCTTTCCGCTGTGGCAATAATGGCGGCGGCCGCTTTGGCCTTGTTGGCATGGCTTCTGGTGATTACGGCAGTGAGAGCGGGCATTACGGCCATGGAAATGCTAACCATAATGCTCACCACGGGATGAGAATGGCTCGTGCTGAGGACTATGGCGATCGTGAAATTTCAGAGGAAGAGTTTGAGAGGCTCCTTGAGTATGCCGAGCAGTGCAATGTTGTCAAGATGTACTGA Coding sequence (CDS) ATGGCGAGCCGTTCAGTGAACAACCTCATGTGCAAGGATGACTTGAGAAGAGCTTACAGAGAGAAAGCTGGGAGATCAAGAAGACGCGTCAAAGTCCGTGACATCATCGACATCTTAGACATCATCGTACCTGTCATCCCCCACTTCTTTGGAGGCCGTATCATCGGCGGCGGTGTTAATTGCAGTGCCGGCCCCGACAACTACAACAACAACATGGGTGGTGGTTATGGTCGTGAGGATGACATGCCTTTCCGCTGTGGCAATAATGGCGGCGGCCGCTTTGGCCTTGTTGGCATGGCTTCTGGTGATTACGGCAGTGAGAGCGGGCATTACGGCCATGGAAATGCTAACCATAATGCTCACCACGGGATGAGAATGGCTCGTGCTGAGGACTATGGCGATCGTGAAATTTCAGAGGAAGAGTTTGAGAGGCTCCTTGAGTATGCCGAGCAGTGCAATGTTGTCAAGATGTACTGA Protein sequence MASRSVNNLMCKDDLRRAYREKAGRSRRRVKVRDIIDILDIIVPVIPHFFGGRIIGGGVNCSAGPDNYNNNMGGGYGREDDMPFRCGNNGGGRFGLVGMASGDYGSESGHYGHGNANHNAHHGMRMARAEDYGDREISEEEFERLLEYAEQCNVVKMY
Homology
BLAST of HG10004932 vs. NCBI nr
Match: KGN62520.1 (hypothetical protein Csa_022281 [Cucumis sativus]) HSP 1 Score: 170.2 bits (430), Expect = 1.4e-38 Identity = 105/168 (62.50%), Postives = 121/168 (72.02%), Query Frame = 0
Query: 1 MASRSVNNL-MCKDDLRRAYREKAGRS-RRRVKVRDIIDILDIIVPVIPHFFGGRIIGGG 60
MA RSVNNL KDD+RRAYREK G S RRR+K+RDIID+L+I+ P+IPHFFG
Sbjct: 1 MAFRSVNNLQFWKDDMRRAYREKVGSSRRRRIKIRDIIDVLEIVGPIIPHFFGSN----- 60
Query: 61 VNCSAGPDNY----NNNMGGGYGREDD--MPFRCGNNGGGRFGLVGMASGDYGSESGHYG 120
+ SAGPDNY NN+M G YGR DD F CG GGGRFGL M SGDYG+ES HYG
Sbjct: 61 -SLSAGPDNYSNYGNNHMNGSYGRRDDDMHSFHCGGGGGGRFGL-DMGSGDYGNESRHYG 120
Query: 121 HGNANHNAHHGMRMARAEDYGDREISEEEFERLLEYAEQC--NVVKMY 159
G N N+ +GMRMA AEDY DREI+EEEFERLL++AEQ N +MY
Sbjct: 121 -GRGNGNSQYGMRMALAEDYYDREITEEEFERLLDFAEQSHNNNSRMY 160
BLAST of HG10004932 vs. NCBI nr
Match: XP_022962401.1 (zinc transporter 7-like [Cucurbita moschata]) HSP 1 Score: 131.7 bits (330), Expect = 5.5e-27 Identity = 84/165 (50.91%), Postives = 108/165 (65.45%), Query Frame = 0
Query: 1 MASRSVNNLMCKDDLRRAYREKAGRSRR-RVKVRDIIDILDIIVPVIPHFFGGRIIGGGV 60
MA RSV+NL C+DDL YR A RSRR RVK+RDII+I++I+ P+IPHFF GG
Sbjct: 1 MACRSVDNLRCRDDLMNVYRANASRSRRGRVKIRDIIEIIEILGPIIPHFFKKH---GGA 60
Query: 61 NCSAGPDNYNNNMGGGYGREDDMPFRCGNNGGGRFGLVGMASGDYGSESGHY------GH 120
N N+++ GY R+ D + G RFG GMASG+YG+ SGHY GH
Sbjct: 61 N------NFSSCGSMGYARDQD-------DMGSRFGF-GMASGEYGNGSGHYGHSHGHGH 120
Query: 121 GNANHNAHHGMRMARAEDYGDREISEEEFERLLEYAEQCNVVKMY 159
+++ +H+GM M +DY D EISEEEFE+LL+YAEQCN V+MY
Sbjct: 121 SHSHGESHYGMSMGHVDDYADHEISEEEFEKLLDYAEQCN-VRMY 147
BLAST of HG10004932 vs. NCBI nr
Match: XP_023545419.1 (zinc transporter 7-A-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545420.1 zinc transporter 7-A-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 130.6 bits (327), Expect = 1.2e-26 Identity = 84/170 (49.41%), Postives = 107/170 (62.94%), Query Frame = 0
Query: 1 MASRSVNNLMCKDDLRRAYREKAGRSRR-RVKVRDIIDILDIIVPVIPHFFGGRIIGGGV 60
MA RSV+NL C+DDL YR A RSRR RVK+RDII+I++I+ P+IP FF GG
Sbjct: 1 MACRSVDNLRCRDDLMNVYRANARRSRRGRVKIRDIIEIIEILGPIIPPFFQKH---GGA 60
Query: 61 NCSAGPDNYNNNMGGGYGR-EDDMPFRCGNNGGGRFGLVGMASGDYGSESGHY------- 120
N N+++ GY R +DDM RCG GM+SGDYG+ SGHY
Sbjct: 61 N------NFSSCGSMGYARDQDDMGSRCG---------FGMSSGDYGNGSGHYGHSHGHG 120
Query: 121 ---GHGNANHNAHHGMRMARAEDYGDREISEEEFERLLEYAEQCNVVKMY 159
GH +++ +H+GM M +DY D EISEEEFE+LL+YAEQCN V+MY
Sbjct: 121 HGHGHSHSHGESHYGMSMGHVDDYADHEISEEEFEKLLDYAEQCN-VRMY 151
BLAST of HG10004932 vs. NCBI nr
Match: KAG6598377.1 (hypothetical protein SDJN03_08155, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 127.1 bits (318), Expect = 1.3e-25 Identity = 83/165 (50.30%), Postives = 107/165 (64.85%), Query Frame = 0
Query: 1 MASRSVNNLMCKDDLRRAYREKAGRSRR-RVKVRDIIDILDIIVPVIPHFFGGRIIGGGV 60
MA RSV+NL C+DDL YR A RSRR RVK+RDII+I++I+ P+IP FF GG
Sbjct: 1 MACRSVDNLRCRDDLMNVYRANARRSRRGRVKIRDIIEIIEILGPIIPPFFQKH---GGA 60
Query: 61 NCSAGPDNYNNNMGGGYGREDDMPFRCGNNGGGRFGLVGMASGDYGSESGHY------GH 120
N N+++ GY R+ D + G RFG GMASG+YG+ SGHY GH
Sbjct: 61 N------NFSSCGSMGYARDQD-------DMGSRFGF-GMASGEYGNGSGHYGHSHGHGH 120
Query: 121 GNANHNAHHGMRMARAEDYGDREISEEEFERLLEYAEQCNVVKMY 159
+++ +H+GM M +DY D EISEEEFE+LL+YAEQCN V+MY
Sbjct: 121 SHSHGESHYGMSMGHVDDYADHEISEEEFEKLLDYAEQCN-VRMY 147
BLAST of HG10004932 vs. NCBI nr
Match: KAG6598378.1 (hypothetical protein SDJN03_08156, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 94.7 bits (234), Expect = 7.4e-16 Identity = 69/160 (43.12%), Postives = 90/160 (56.25%), Query Frame = 0
Query: 1 MASRSVNNLMCKDDLRRAYREKAGRSRR-RVKVRDIIDILDIIVPVIPHFFGGRIIGGGV 60
MA RSV+NL C+DDL YR A RSRR VK+RDII I+ I+ PV+PHFF R G
Sbjct: 1 MACRSVDNLRCRDDLMNVYRANAHRSRRGSVKIRDIIGIIKILGPVVPHFFERR---NGA 60
Query: 61 NCSAGPDNYNNNMGGGYGREDDMPFRCGNNGGGRFGLVGMASGDYGSESGH-YGHGNANH 120
N + + M + ++ M + + GH +GH +++
Sbjct: 61 NVTLVV------VAAWVMLVTRMTWVPALGLVWLLVIMAMVAATMATAHGHGHGHSHSHG 120
Query: 121 NAHHGMRMARAEDYGDREISEEEFERLLEYAEQCNVVKMY 159
+H+GM M +DY D EISEEEFERLL+YAEQCN VKMY
Sbjct: 121 ESHYGMSMGHVDDYADHEISEEEFERLLDYAEQCN-VKMY 150
BLAST of HG10004932 vs. ExPASy TrEMBL
Match: A0A0A0LKW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359890 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 6.7e-39 Identity = 105/168 (62.50%), Postives = 121/168 (72.02%), Query Frame = 0
Query: 1 MASRSVNNL-MCKDDLRRAYREKAGRS-RRRVKVRDIIDILDIIVPVIPHFFGGRIIGGG 60
MA RSVNNL KDD+RRAYREK G S RRR+K+RDIID+L+I+ P+IPHFFG
Sbjct: 1 MAFRSVNNLQFWKDDMRRAYREKVGSSRRRRIKIRDIIDVLEIVGPIIPHFFGSN----- 60
Query: 61 VNCSAGPDNY----NNNMGGGYGREDD--MPFRCGNNGGGRFGLVGMASGDYGSESGHYG 120
+ SAGPDNY NN+M G YGR DD F CG GGGRFGL M SGDYG+ES HYG
Sbjct: 61 -SLSAGPDNYSNYGNNHMNGSYGRRDDDMHSFHCGGGGGGRFGL-DMGSGDYGNESRHYG 120
Query: 121 HGNANHNAHHGMRMARAEDYGDREISEEEFERLLEYAEQC--NVVKMY 159
G N N+ +GMRMA AEDY DREI+EEEFERLL++AEQ N +MY
Sbjct: 121 -GRGNGNSQYGMRMALAEDYYDREITEEEFERLLDFAEQSHNNNSRMY 160
BLAST of HG10004932 vs. ExPASy TrEMBL
Match: A0A6J1HD14 (zinc transporter 7-like OS=Cucurbita moschata OX=3662 GN=LOC111462856 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 2.6e-27 Identity = 84/165 (50.91%), Postives = 108/165 (65.45%), Query Frame = 0
Query: 1 MASRSVNNLMCKDDLRRAYREKAGRSRR-RVKVRDIIDILDIIVPVIPHFFGGRIIGGGV 60
MA RSV+NL C+DDL YR A RSRR RVK+RDII+I++I+ P+IPHFF GG
Sbjct: 1 MACRSVDNLRCRDDLMNVYRANASRSRRGRVKIRDIIEIIEILGPIIPHFFKKH---GGA 60
Query: 61 NCSAGPDNYNNNMGGGYGREDDMPFRCGNNGGGRFGLVGMASGDYGSESGHY------GH 120
N N+++ GY R+ D + G RFG GMASG+YG+ SGHY GH
Sbjct: 61 N------NFSSCGSMGYARDQD-------DMGSRFGF-GMASGEYGNGSGHYGHSHGHGH 120
Query: 121 GNANHNAHHGMRMARAEDYGDREISEEEFERLLEYAEQCNVVKMY 159
+++ +H+GM M +DY D EISEEEFE+LL+YAEQCN V+MY
Sbjct: 121 SHSHGESHYGMSMGHVDDYADHEISEEEFEKLLDYAEQCN-VRMY 147
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| KGN62520.1 | 1.4e-38 | 62.50 | hypothetical protein Csa_022281 [Cucumis sativus] | [more] |
| XP_022962401.1 | 5.5e-27 | 50.91 | zinc transporter 7-like [Cucurbita moschata] | [more] |
| XP_023545419.1 | 1.2e-26 | 49.41 | zinc transporter 7-A-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545420.... | [more] |
| KAG6598377.1 | 1.3e-25 | 50.30 | hypothetical protein SDJN03_08155, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG6598378.1 | 7.4e-16 | 43.13 | hypothetical protein SDJN03_08156, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LKW7 | 6.7e-39 | 62.50 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359890 PE=4 SV=1 | [more] |
| A0A6J1HD14 | 2.6e-27 | 50.91 | zinc transporter 7-like OS=Cucurbita moschata OX=3662 GN=LOC111462856 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
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Relationships
The following mRNA feature(s) are a part of this gene:
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