HG10004857 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10004857
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionHAD-superfamily hydrolase isoform 1
LocationChr08: 20981339 .. 20983353 (-)
RNA-Seq ExpressionHG10004857
SyntenyHG10004857
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAACGATTGGATTCCGCCTTATCTCGGTTCCTGCCGCCGTCTCTCCACCTTCTCCACCTTCTCAAAGTCCGAACAATGATTCATTCCAAGAAAGCCAATCGCCGGGCCATCAACTTCCGATTACAACATCTCGCAGAAGCCTCACTATGCTCTCATTTATCTCTGCGGTGCCGTCTCTGTTTCTACCCGCTCCCGCCACTGCTTTCAATATCGGCATTTGTAAGCAGCACGCGACCGCAACGTTGATTCGTCGATTGTTTCGTCTTCCTTGTGTTCTTTGTTTTGTTGTTGGAACCCTAGTTTATAGGTTTGTTTGCAGCAGGACCAAAGGATTGGCTGAAGGAGCAGAAGAAGAAGGCCTCCAAATTCCTCTTGGCACCAATTGAGGCCTCCAGAGACAGCCTTCACATAGTTTACCTTTTGCTTTGTAAGTCTCTCACCGTCTCTTGTTTCTCCGTTATCTCCTCGTTCGGTATCCTCTTACATCGTCTCCGGTTGCAGCCAACGATTCCAATTACTCAAATAAGGATATGGAGGACGTTCAAAGACTGCTTAAGTCTGCTGCAAGGGATTGCGTTTTGAAGGACAGGAGCTCGTTTGTTCAATTCCAAGCGAGTACAGGAGTCGAGGTTCAATCTTCTAATATTGCTTGTGTTTCTCTTTGTATTCGTTCTGAATTCCTTGCGTTTGTAAACCAGGAATTATCCAAATACAATGTGCAATTCAAACTGTTATTTTAGCATCCCATGCCGCTACTCATAGAATCTGTTGAAGTATATACTAAATTCACATTGAATAGATTAGATATGTTGAAATATTTGTCCAATATCCTAGCTTGAATGTTCTTTGGTTTCAATCTTTGTATTTCGCAGGTCTGTACATTTCAATTGATTGTGAAAAATGCATCATCCTTGCTTGGAAACAAAGATCCTATAAAACTAGAAGCTGAAAGTCTATTAAAAGATCTAGTAAGGTAGCCTCCATTTCATTTGCTGCTGCCTATTATGTTATTTCTTCAATTGGATAATGCTTTTATTTTGATAAGTAATAGTTACCTGTTTGGTCGTTTAGTTTATTTATAAGGTAAGTTGCTTTATGTTTATTCGTACAATGGACTGGTAAGAATAAAGATTAAATTTCTAATGGCTCTTGGATAAAAAATGTTCCAGCAACATTGAAGAGTTGTATTATATCCTCTCTTCCAATAATCCAACAGTCATTAGTTTTGTTTCTATTGATTGTCATTTTAATATTTTCTCGTTCTTATAATGCAGCTCTTTCACATCTCTTAATAGTCTTGCCTATGAAACTGATATTCAAGTCAATTCCAATAGGTACGTACGTCCTCATTCAAAGGCTCAAATAAAGTTTGTCTTGAACAGTTGTTGTCCCATCTCAAATTAATATCTTAATAGACAAATACTATTACTTAGTAATTAGATTTTCCAAAATGTTAGATTTTCTGCCACATGATAGGGCTGGTGGCTGATGATCCATTTTTCCAAGCGCTGTTCAGTTAGTAGGTGGTCCGTTTTCTTTGATTACATGACTTAACGCAAATTTCAAGACTAATGCGAAATGGTAAAGACGTGAAACTAGATAGGGATTCTATGGGAATTTGTACTTTGGGTGTGCATAAGTGAAACTCAACAGCAAGGTCTTCCTAGTGGGTAGCAATGCTGTAAGATTGAAAAATCCATGGCAGTGATGGAATTGTAGTTTGGTTTGAAGGCCATTACAGCCGTGTAACTCAGATACAGTATTCTGCTGACTTTAACTAAGTGAAGCTCTTTCATTATGCTTTATATATTTGATATTGCAGGGAATTTTTCCCTGTGAATTTCGGTACAAAAACTTGTGGCCATCTAAACCCTTTTCCGTGTATACTTGTCTATTTACTTATTTACTATTATTTTTTTGTTGCAGACAAAAGGTATTGGATGCACTAAATGATACCATGTCTTCCCTCGACAAATTTGAGAAGGGTATTAAGGATTGTCTTGAAATTTAA

mRNA sequence

ATGACAACGATTGGATTCCGCCTTATCTCGGTTCCTGCCGCCGTCTCTCCACCTTCTCCACCTTCTCAAAGTCCGAACAATGATTCATTCCAAGAAAGCCAATCGCCGGGCCATCAACTTCCGATTACAACATCTCGCAGAAGCCTCACTATGCTCTCATTTATCTCTGCGGTGCCGTCTCTGTTTCTACCCGCTCCCGCCACTGCTTTCAATATCGGCATTTGTTTGTTTGCAGCAGGACCAAAGGATTGGCTGAAGGAGCAGAAGAAGAAGGCCTCCAAATTCCTCTTGGCACCAATTGAGGCCTCCAGAGACAGCCTTCACATAGTTTACCTTTTGCTTTCCAACGATTCCAATTACTCAAATAAGGATATGGAGGACGTTCAAAGACTGCTTAAGTCTGCTGCAAGGGATTGCGTTTTGAAGGACAGGAGCTCGTTTGTTCAATTCCAAGCGAGTACAGGAGTCGAGGTCTGTACATTTCAATTGATTGTGAAAAATGCATCATCCTTGCTTGGAAACAAAGATCCTATAAAACTAGAAGCTGAAAGTCTATTAAAAGATCTAGTAAGCTCTTTCACATCTCTTAATAGTCTTGCCTATGAAACTGATATTCAAGTCAATTCCAATAGACAAAAGGTATTGGATGCACTAAATGATACCATGTCTTCCCTCGACAAATTTGAGAAGGGTATTAAGGATTGTCTTGAAATTTAA

Coding sequence (CDS)

ATGACAACGATTGGATTCCGCCTTATCTCGGTTCCTGCCGCCGTCTCTCCACCTTCTCCACCTTCTCAAAGTCCGAACAATGATTCATTCCAAGAAAGCCAATCGCCGGGCCATCAACTTCCGATTACAACATCTCGCAGAAGCCTCACTATGCTCTCATTTATCTCTGCGGTGCCGTCTCTGTTTCTACCCGCTCCCGCCACTGCTTTCAATATCGGCATTTGTTTGTTTGCAGCAGGACCAAAGGATTGGCTGAAGGAGCAGAAGAAGAAGGCCTCCAAATTCCTCTTGGCACCAATTGAGGCCTCCAGAGACAGCCTTCACATAGTTTACCTTTTGCTTTCCAACGATTCCAATTACTCAAATAAGGATATGGAGGACGTTCAAAGACTGCTTAAGTCTGCTGCAAGGGATTGCGTTTTGAAGGACAGGAGCTCGTTTGTTCAATTCCAAGCGAGTACAGGAGTCGAGGTCTGTACATTTCAATTGATTGTGAAAAATGCATCATCCTTGCTTGGAAACAAAGATCCTATAAAACTAGAAGCTGAAAGTCTATTAAAAGATCTAGTAAGCTCTTTCACATCTCTTAATAGTCTTGCCTATGAAACTGATATTCAAGTCAATTCCAATAGACAAAAGGTATTGGATGCACTAAATGATACCATGTCTTCCCTCGACAAATTTGAGAAGGGTATTAAGGATTGTCTTGAAATTTAA

Protein sequence

MTTIGFRLISVPAAVSPPSPPSQSPNNDSFQESQSPGHQLPITTSRRSLTMLSFISAVPSLFLPAPATAFNIGICLFAAGPKDWLKEQKKKASKFLLAPIEASRDSLHIVYLLLSNDSNYSNKDMEDVQRLLKSAARDCVLKDRSSFVQFQASTGVEVCTFQLIVKNASSLLGNKDPIKLEAESLLKDLVSSFTSLNSLAYETDIQVNSNRQKVLDALNDTMSSLDKFEKGIKDCLEI
Homology
BLAST of HG10004857 vs. NCBI nr
Match: XP_038884855.1 (uncharacterized protein LOC120075490 isoform X1 [Benincasa hispida])

HSP 1 Score: 401.7 bits (1031), Expect = 4.3e-108
Identity = 215/238 (90.34%), Postives = 222/238 (93.28%), Query Frame = 0

Query: 1   MTTIGFRLISVPAAVSPPSPPSQSPNNDSFQESQSPGHQLPITTSRRSLTMLSFISAVPS 60
           MTTIGFRL  V AAVSPPSP SQ+PNND FQESQ P HQLPITTSRR LTMLSFISAVPS
Sbjct: 1   MTTIGFRLTPVRAAVSPPSPLSQNPNNDPFQESQPPRHQLPITTSRRGLTMLSFISAVPS 60

Query: 61  LFLPAPATAFNIGICLFAAGPKDWLKEQKKKASKFLLAPIEASRDSLHIVYLLLSNDSNY 120
           LFLPAPATAFNIGI    +GPKDWLKEQKKKASKFLLAPIEASRDSL  V+LLLSNDS+Y
Sbjct: 61  LFLPAPATAFNIGI----SGPKDWLKEQKKKASKFLLAPIEASRDSLQTVHLLLSNDSDY 120

Query: 121 SNKDMEDVQRLLKSAARDCVLKDRSSFVQFQASTGVEVCTFQLIVKNASSLLGNKDPIKL 180
           SNKDMEDV RLLKSAARDCVLKDR+SFVQFQASTGVEVCTFQLIVKNASSLLGNKDPIKL
Sbjct: 121 SNKDMEDVHRLLKSAARDCVLKDRNSFVQFQASTGVEVCTFQLIVKNASSLLGNKDPIKL 180

Query: 181 EAESLLKDLVSSFTSLNSLAYETDIQVNSNRQKVLDALNDTMSSLDKFEKGIKDCLEI 239
           EAESLLKDLVSSFT LNSLAYETDIQV+SNRQ+VLDALNDTMSSLDKFEKGIKDCLEI
Sbjct: 181 EAESLLKDLVSSFTFLNSLAYETDIQVDSNRQRVLDALNDTMSSLDKFEKGIKDCLEI 234

BLAST of HG10004857 vs. NCBI nr
Match: XP_008444717.1 (PREDICTED: uncharacterized protein LOC103487971 [Cucumis melo] >KAA0065233.1 Chloroplast thylakoid membrane [Cucumis melo var. makuwa])

HSP 1 Score: 397.9 bits (1021), Expect = 6.2e-107
Identity = 213/238 (89.50%), Postives = 224/238 (94.12%), Query Frame = 0

Query: 1   MTTIGFRLISVPAAVSPPSPPSQSPNNDSFQESQSPGHQLPITTSRRSLTMLSFISAVPS 60
           MTTIGFRL SVPAAV   SPPSQSPN+D FQESQ+  HQLPITTSRR LTMLSFISA+PS
Sbjct: 1   MTTIGFRLFSVPAAV---SPPSQSPNSDQFQESQTLRHQLPITTSRRGLTMLSFISAMPS 60

Query: 61  LFLPAPATAFNIGICLFAAGPKDWLKEQKKKASKFLLAPIEASRDSLHIVYLLLSNDSNY 120
           LFLPAPA+AF+IGI    +GPKDWLKEQKKK+SKFLLAPIEASRDSL  VYLLLSNDS+Y
Sbjct: 61  LFLPAPASAFDIGI----SGPKDWLKEQKKKSSKFLLAPIEASRDSLQTVYLLLSNDSDY 120

Query: 121 SNKDMEDVQRLLKSAARDCVLKDRSSFVQFQASTGVEVCTFQLIVKNASSLLGNKDPIKL 180
           SNKDMEDVQRLLKSAARDCVLKDRSSFVQFQASTGVEVCTFQLIVKNA+SLLGNKDPIKL
Sbjct: 121 SNKDMEDVQRLLKSAARDCVLKDRSSFVQFQASTGVEVCTFQLIVKNAASLLGNKDPIKL 180

Query: 181 EAESLLKDLVSSFTSLNSLAYETDIQVNSNRQKVLDALNDTMSSLDKFEKGIKDCLEI 239
           EAE+LLKDLVSSFTSLNSLAYETDIQVNSNRQKVLDALNDTM+SLDKFEKGIKDCLEI
Sbjct: 181 EAENLLKDLVSSFTSLNSLAYETDIQVNSNRQKVLDALNDTMTSLDKFEKGIKDCLEI 231

BLAST of HG10004857 vs. NCBI nr
Match: XP_004152696.1 (uncharacterized protein LOC101216764 isoform X1 [Cucumis sativus] >KGN62602.1 hypothetical protein Csa_022077 [Cucumis sativus])

HSP 1 Score: 393.3 bits (1009), Expect = 1.5e-105
Identity = 212/238 (89.08%), Postives = 221/238 (92.86%), Query Frame = 0

Query: 1   MTTIGFRLISVPAAVSPPSPPSQSPNNDSFQESQSPGHQLPITTSRRSLTMLSFISAVPS 60
           MTTIGFRLISV AAV   SPPSQSPNND FQE Q   HQLPITTSRR LTMLSFISAVPS
Sbjct: 1   MTTIGFRLISVSAAV---SPPSQSPNNDQFQECQPLRHQLPITTSRRGLTMLSFISAVPS 60

Query: 61  LFLPAPATAFNIGICLFAAGPKDWLKEQKKKASKFLLAPIEASRDSLHIVYLLLSNDSNY 120
           LFLPAPA+AF+IGI    +GPKDWLKEQKKKASKFLLAPIEASRDSL  VYLLLSNDS+Y
Sbjct: 61  LFLPAPASAFDIGI----SGPKDWLKEQKKKASKFLLAPIEASRDSLQAVYLLLSNDSDY 120

Query: 121 SNKDMEDVQRLLKSAARDCVLKDRSSFVQFQASTGVEVCTFQLIVKNASSLLGNKDPIKL 180
           S+KDMEDVQRLLKSAARDCVLKDR+SFVQFQASTGVEVCTFQLIVKNA+SLLGN+DPIKL
Sbjct: 121 SSKDMEDVQRLLKSAARDCVLKDRNSFVQFQASTGVEVCTFQLIVKNAASLLGNRDPIKL 180

Query: 181 EAESLLKDLVSSFTSLNSLAYETDIQVNSNRQKVLDALNDTMSSLDKFEKGIKDCLEI 239
           EAESLLKDLVSSFTSLNSL YETDIQVNSNRQKVLDALNDTM+SLDKFEKGIKDCLEI
Sbjct: 181 EAESLLKDLVSSFTSLNSLTYETDIQVNSNRQKVLDALNDTMTSLDKFEKGIKDCLEI 231

BLAST of HG10004857 vs. NCBI nr
Match: XP_038884856.1 (uncharacterized protein LOC120075490 isoform X2 [Benincasa hispida])

HSP 1 Score: 384.8 bits (987), Expect = 5.4e-103
Identity = 207/230 (90.00%), Postives = 214/230 (93.04%), Query Frame = 0

Query: 1   MTTIGFRLISVPAAVSPPSPPSQSPNNDSFQESQSPGHQLPITTSRRSLTMLSFISAVPS 60
           MTTIGFRL  V AAVSPPSP SQ+PNND FQESQ P HQLPITTSRR LTMLSFISAVPS
Sbjct: 1   MTTIGFRLTPVRAAVSPPSPLSQNPNNDPFQESQPPRHQLPITTSRRGLTMLSFISAVPS 60

Query: 61  LFLPAPATAFNIGICLFAAGPKDWLKEQKKKASKFLLAPIEASRDSLHIVYLLLSNDSNY 120
           LFLPAPATAFNIGI    +GPKDWLKEQKKKASKFLLAPIEASRDSL  V+LLLSNDS+Y
Sbjct: 61  LFLPAPATAFNIGI----SGPKDWLKEQKKKASKFLLAPIEASRDSLQTVHLLLSNDSDY 120

Query: 121 SNKDMEDVQRLLKSAARDCVLKDRSSFVQFQASTGVEVCTFQLIVKNASSLLGNKDPIKL 180
           SNKDMEDV RLLKSAARDCVLKDR+SFVQFQASTGVEVCTFQLIVKNASSLLGNKDPIKL
Sbjct: 121 SNKDMEDVHRLLKSAARDCVLKDRNSFVQFQASTGVEVCTFQLIVKNASSLLGNKDPIKL 180

Query: 181 EAESLLKDLVSSFTSLNSLAYETDIQVNSNRQKVLDALNDTMSSLDKFEK 231
           EAESLLKDLVSSFT LNSLAYETDIQV+SNRQ+VLDALNDTMSSLDKFEK
Sbjct: 181 EAESLLKDLVSSFTFLNSLAYETDIQVDSNRQRVLDALNDTMSSLDKFEK 226

BLAST of HG10004857 vs. NCBI nr
Match: XP_023545902.1 (uncharacterized protein LOC111805195 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 373.6 bits (958), Expect = 1.2e-99
Identity = 200/238 (84.03%), Postives = 218/238 (91.60%), Query Frame = 0

Query: 1   MTTIGFRLISVPAAVSPPSPPSQSPNNDSFQESQSPGHQLPITTSRRSLTMLSFISAVPS 60
           MTTIGFRLISVP+AVSP S  S  PNND   +SQ+  H LPITTSRR LTMLSF+SA+PS
Sbjct: 1   MTTIGFRLISVPSAVSPLSLLSHRPNND---QSQALRHNLPITTSRRGLTMLSFLSAMPS 60

Query: 61  LFLPAPATAFNIGICLFAAGPKDWLKEQKKKASKFLLAPIEASRDSLHIVYLLLSNDSNY 120
           LFLPAPATAF+IGI    +GPKDWL+EQK+KAS+FLLAPIEASR SLH VYL+LSNDS+Y
Sbjct: 61  LFLPAPATAFDIGI----SGPKDWLREQKRKASRFLLAPIEASRGSLHAVYLMLSNDSDY 120

Query: 121 SNKDMEDVQRLLKSAARDCVLKDRSSFVQFQASTGVEVCTFQLIVKNASSLLGNKDPIKL 180
           SNKDMEDVQR+LKSAARDCVLKDR+SFVQFQASTGVEVCTFQLIVKNA+SLLGN+DPIKL
Sbjct: 121 SNKDMEDVQRMLKSAARDCVLKDRNSFVQFQASTGVEVCTFQLIVKNAASLLGNEDPIKL 180

Query: 181 EAESLLKDLVSSFTSLNSLAYETDIQVNSNRQKVLDALNDTMSSLDKFEKGIKDCLEI 239
           EAES LKDLVSSFTSLNSLAYETDIQVNSNRQKVLDA+NDT+ SLDKFEKGIKDCLEI
Sbjct: 181 EAESRLKDLVSSFTSLNSLAYETDIQVNSNRQKVLDAVNDTIDSLDKFEKGIKDCLEI 231

BLAST of HG10004857 vs. ExPASy TrEMBL
Match: A0A5A7VAP0 (Chloroplast thylakoid membrane OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005740 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 3.0e-107
Identity = 213/238 (89.50%), Postives = 224/238 (94.12%), Query Frame = 0

Query: 1   MTTIGFRLISVPAAVSPPSPPSQSPNNDSFQESQSPGHQLPITTSRRSLTMLSFISAVPS 60
           MTTIGFRL SVPAAV   SPPSQSPN+D FQESQ+  HQLPITTSRR LTMLSFISA+PS
Sbjct: 1   MTTIGFRLFSVPAAV---SPPSQSPNSDQFQESQTLRHQLPITTSRRGLTMLSFISAMPS 60

Query: 61  LFLPAPATAFNIGICLFAAGPKDWLKEQKKKASKFLLAPIEASRDSLHIVYLLLSNDSNY 120
           LFLPAPA+AF+IGI    +GPKDWLKEQKKK+SKFLLAPIEASRDSL  VYLLLSNDS+Y
Sbjct: 61  LFLPAPASAFDIGI----SGPKDWLKEQKKKSSKFLLAPIEASRDSLQTVYLLLSNDSDY 120

Query: 121 SNKDMEDVQRLLKSAARDCVLKDRSSFVQFQASTGVEVCTFQLIVKNASSLLGNKDPIKL 180
           SNKDMEDVQRLLKSAARDCVLKDRSSFVQFQASTGVEVCTFQLIVKNA+SLLGNKDPIKL
Sbjct: 121 SNKDMEDVQRLLKSAARDCVLKDRSSFVQFQASTGVEVCTFQLIVKNAASLLGNKDPIKL 180

Query: 181 EAESLLKDLVSSFTSLNSLAYETDIQVNSNRQKVLDALNDTMSSLDKFEKGIKDCLEI 239
           EAE+LLKDLVSSFTSLNSLAYETDIQVNSNRQKVLDALNDTM+SLDKFEKGIKDCLEI
Sbjct: 181 EAENLLKDLVSSFTSLNSLAYETDIQVNSNRQKVLDALNDTMTSLDKFEKGIKDCLEI 231

BLAST of HG10004857 vs. ExPASy TrEMBL
Match: A0A1S3BAY8 (uncharacterized protein LOC103487971 OS=Cucumis melo OX=3656 GN=LOC103487971 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 3.0e-107
Identity = 213/238 (89.50%), Postives = 224/238 (94.12%), Query Frame = 0

Query: 1   MTTIGFRLISVPAAVSPPSPPSQSPNNDSFQESQSPGHQLPITTSRRSLTMLSFISAVPS 60
           MTTIGFRL SVPAAV   SPPSQSPN+D FQESQ+  HQLPITTSRR LTMLSFISA+PS
Sbjct: 1   MTTIGFRLFSVPAAV---SPPSQSPNSDQFQESQTLRHQLPITTSRRGLTMLSFISAMPS 60

Query: 61  LFLPAPATAFNIGICLFAAGPKDWLKEQKKKASKFLLAPIEASRDSLHIVYLLLSNDSNY 120
           LFLPAPA+AF+IGI    +GPKDWLKEQKKK+SKFLLAPIEASRDSL  VYLLLSNDS+Y
Sbjct: 61  LFLPAPASAFDIGI----SGPKDWLKEQKKKSSKFLLAPIEASRDSLQTVYLLLSNDSDY 120

Query: 121 SNKDMEDVQRLLKSAARDCVLKDRSSFVQFQASTGVEVCTFQLIVKNASSLLGNKDPIKL 180
           SNKDMEDVQRLLKSAARDCVLKDRSSFVQFQASTGVEVCTFQLIVKNA+SLLGNKDPIKL
Sbjct: 121 SNKDMEDVQRLLKSAARDCVLKDRSSFVQFQASTGVEVCTFQLIVKNAASLLGNKDPIKL 180

Query: 181 EAESLLKDLVSSFTSLNSLAYETDIQVNSNRQKVLDALNDTMSSLDKFEKGIKDCLEI 239
           EAE+LLKDLVSSFTSLNSLAYETDIQVNSNRQKVLDALNDTM+SLDKFEKGIKDCLEI
Sbjct: 181 EAENLLKDLVSSFTSLNSLAYETDIQVNSNRQKVLDALNDTMTSLDKFEKGIKDCLEI 231

BLAST of HG10004857 vs. ExPASy TrEMBL
Match: A0A0A0LPA8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361670 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 7.3e-106
Identity = 212/238 (89.08%), Postives = 221/238 (92.86%), Query Frame = 0

Query: 1   MTTIGFRLISVPAAVSPPSPPSQSPNNDSFQESQSPGHQLPITTSRRSLTMLSFISAVPS 60
           MTTIGFRLISV AAV   SPPSQSPNND FQE Q   HQLPITTSRR LTMLSFISAVPS
Sbjct: 1   MTTIGFRLISVSAAV---SPPSQSPNNDQFQECQPLRHQLPITTSRRGLTMLSFISAVPS 60

Query: 61  LFLPAPATAFNIGICLFAAGPKDWLKEQKKKASKFLLAPIEASRDSLHIVYLLLSNDSNY 120
           LFLPAPA+AF+IGI    +GPKDWLKEQKKKASKFLLAPIEASRDSL  VYLLLSNDS+Y
Sbjct: 61  LFLPAPASAFDIGI----SGPKDWLKEQKKKASKFLLAPIEASRDSLQAVYLLLSNDSDY 120

Query: 121 SNKDMEDVQRLLKSAARDCVLKDRSSFVQFQASTGVEVCTFQLIVKNASSLLGNKDPIKL 180
           S+KDMEDVQRLLKSAARDCVLKDR+SFVQFQASTGVEVCTFQLIVKNA+SLLGN+DPIKL
Sbjct: 121 SSKDMEDVQRLLKSAARDCVLKDRNSFVQFQASTGVEVCTFQLIVKNAASLLGNRDPIKL 180

Query: 181 EAESLLKDLVSSFTSLNSLAYETDIQVNSNRQKVLDALNDTMSSLDKFEKGIKDCLEI 239
           EAESLLKDLVSSFTSLNSL YETDIQVNSNRQKVLDALNDTM+SLDKFEKGIKDCLEI
Sbjct: 181 EAESLLKDLVSSFTSLNSLTYETDIQVNSNRQKVLDALNDTMTSLDKFEKGIKDCLEI 231

BLAST of HG10004857 vs. ExPASy TrEMBL
Match: A0A6J1K9U3 (uncharacterized protein LOC111492399 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492399 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 6.7e-99
Identity = 199/238 (83.61%), Postives = 217/238 (91.18%), Query Frame = 0

Query: 1   MTTIGFRLISVPAAVSPPSPPSQSPNNDSFQESQSPGHQLPITTSRRSLTMLSFISAVPS 60
           MTTIGFRLISVP+AVSP S  S  P +D   +SQ+  H LPITTSRR LTMLSF+SA+PS
Sbjct: 1   MTTIGFRLISVPSAVSPLSLLSHKPRDD---QSQALRHNLPITTSRRGLTMLSFLSAMPS 60

Query: 61  LFLPAPATAFNIGICLFAAGPKDWLKEQKKKASKFLLAPIEASRDSLHIVYLLLSNDSNY 120
           LFLPAPATAF+IGI    +GPKDWL+EQKKKAS+FLLAPIEASRDSLH VYL+LSN S+Y
Sbjct: 61  LFLPAPATAFDIGI----SGPKDWLREQKKKASRFLLAPIEASRDSLHAVYLMLSNYSDY 120

Query: 121 SNKDMEDVQRLLKSAARDCVLKDRSSFVQFQASTGVEVCTFQLIVKNASSLLGNKDPIKL 180
           SNKDMEDVQR+LKSAARDCVLKDR+SFVQFQASTGVEVCTFQLIVKNA+SLLGN+DPIKL
Sbjct: 121 SNKDMEDVQRMLKSAARDCVLKDRNSFVQFQASTGVEVCTFQLIVKNAASLLGNEDPIKL 180

Query: 181 EAESLLKDLVSSFTSLNSLAYETDIQVNSNRQKVLDALNDTMSSLDKFEKGIKDCLEI 239
           EAES LKDLVSSFTSLNSLAYETDIQVNSNRQKVLDA+NDT+ SLDKFEKGIKDCLEI
Sbjct: 181 EAESRLKDLVSSFTSLNSLAYETDIQVNSNRQKVLDAVNDTIDSLDKFEKGIKDCLEI 231

BLAST of HG10004857 vs. ExPASy TrEMBL
Match: A0A6J1HBI9 (uncharacterized protein LOC111462505 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462505 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.5e-98
Identity = 197/237 (83.12%), Postives = 216/237 (91.14%), Query Frame = 0

Query: 1   MTTIGFRLISVPAAVSPPSPPSQSPNNDSFQESQSPGHQLPITTSRRSLTMLSFISAVPS 60
           MTTIGFRLISVP+AVSP S  S  P +D   +SQ+  H LP+TTSRR LTMLSF+SA+PS
Sbjct: 1   MTTIGFRLISVPSAVSPLSLLSHEPRDD---QSQALRHNLPVTTSRRGLTMLSFLSAMPS 60

Query: 61  LFLPAPATAFNIGICLFAAGPKDWLKEQKKKASKFLLAPIEASRDSLHIVYLLLSNDSNY 120
           LFLPAPATAF+IGI    +GPKDWL+EQKKKAS+FLLAPIEASRDSLH VYL+LSN S+Y
Sbjct: 61  LFLPAPATAFDIGI----SGPKDWLREQKKKASRFLLAPIEASRDSLHAVYLMLSNGSDY 120

Query: 121 SNKDMEDVQRLLKSAARDCVLKDRSSFVQFQASTGVEVCTFQLIVKNASSLLGNKDPIKL 180
           SNKDMEDVQR+LKSAARDCVLKDR+SFVQFQASTGVEVCTFQLIVKNA+SLLGN+DPIKL
Sbjct: 121 SNKDMEDVQRMLKSAARDCVLKDRNSFVQFQASTGVEVCTFQLIVKNAASLLGNEDPIKL 180

Query: 181 EAESLLKDLVSSFTSLNSLAYETDIQVNSNRQKVLDALNDTMSSLDKFEKGIKDCLE 238
           EAES LKDLVSSFTSLNSLAYETDIQVNSNRQKVLDA+NDT+ SLDKFEKGIKDCLE
Sbjct: 181 EAESRLKDLVSSFTSLNSLAYETDIQVNSNRQKVLDAVNDTIDSLDKFEKGIKDCLE 230

BLAST of HG10004857 vs. TAIR 10
Match: AT5G42765.1 (INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 210.3 bits (534), Expect = 1.7e-54
Identity = 123/234 (52.56%), Postives = 164/234 (70.09%), Query Frame = 0

Query: 9   ISVPAAVSPPSPPSQSPNNDSFQESQSPGHQLPITTSRRSLTMLSFISAVPSLFLPA--- 68
           IS P   S   PP   P       +Q   H LP   SRR  T+L  +S+  SL L     
Sbjct: 7   ISQPFFSSNTKPPPPPP----IAAAQISDH-LPQIISRRDATVL--LSSATSLLLTLSPT 66

Query: 69  -PATAFNIGICLFAAGPKDWLKEQKKKASKFLLAPIEASRDSLHIVYLLLSNDSNYSNKD 128
            PA AF++GI    +GPK+WLK+QKKK+S+FLLAPI+A+R +L   YL L+++S+Y+ KD
Sbjct: 67  NPAFAFSLGI----SGPKEWLKDQKKKSSRFLLAPIDATRQALQSAYLSLTSESDYTEKD 126

Query: 129 MEDVQRLLKSAARDCVLKDRSSFVQFQASTGVEVCTFQLIVKNASSLLGNKDPIKLEAES 188
           +E++Q L KS+ARDCV K+RSS V FQ+ +GVEVCTF+L+VKNA+SLL +KDP+KLEAE+
Sbjct: 127 LENLQNLFKSSARDCVPKERSSLVDFQSKSGVEVCTFKLVVKNAASLLDDKDPVKLEAEN 186

Query: 189 LLKDLVSSFTSLNSLAYETDIQVNSNRQKVLDALNDTMSSLDKFEKGIKDCLEI 239
           +L DLV SF SL  L    D+ + S+R+KV D + +T+S LDKFEKG+KDCLEI
Sbjct: 187 ILDDLVRSFGSLIVLTNGVDMNLPSDRKKVADGVTETISYLDKFEKGVKDCLEI 229

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038884855.14.3e-10890.34uncharacterized protein LOC120075490 isoform X1 [Benincasa hispida][more]
XP_008444717.16.2e-10789.50PREDICTED: uncharacterized protein LOC103487971 [Cucumis melo] >KAA0065233.1 Chl... [more]
XP_004152696.11.5e-10589.08uncharacterized protein LOC101216764 isoform X1 [Cucumis sativus] >KGN62602.1 hy... [more]
XP_038884856.15.4e-10390.00uncharacterized protein LOC120075490 isoform X2 [Benincasa hispida][more]
XP_023545902.11.2e-9984.03uncharacterized protein LOC111805195 isoform X1 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7VAP03.0e-10789.50Chloroplast thylakoid membrane OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A1S3BAY83.0e-10789.50uncharacterized protein LOC103487971 OS=Cucumis melo OX=3656 GN=LOC103487971 PE=... [more]
A0A0A0LPA87.3e-10689.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361670 PE=4 SV=1[more]
A0A6J1K9U36.7e-9983.61uncharacterized protein LOC111492399 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1HBI91.5e-9883.12uncharacterized protein LOC111462505 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
Match NameE-valueIdentityDescription
AT5G42765.11.7e-5452.56INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thyl... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..41
NoneNo IPR availablePANTHERPTHR36398PLASMA MEMBRANE FUSION PROTEINcoord: 1..238

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10004857.1HG10004857.1mRNA