HG10004808 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10004808
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr08: 20590234 .. 20590647 (+)
RNA-Seq ExpressionHG10004808
SyntenyHG10004808
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAATTAGGATATATTCCAGACACAAAGTATGGGCCTCATCATATGGAATCTGAACACAAAGAATATGCCTTGTCTACTCACAGTGATGAGCTTGCAGTTGGGTTTGGGCTAATGAAGCTCTGGGGAAAAATTATTCGGCTGACAACTCTGCATAGTTAGATGTAGATTTGAAAATTGTCACTTCCACTTTTATAGTTTCTCTCATGCATCCAACGGTTGAAAATCTTAAAAAAAAATATCGCAGTGACATCATCGAATAATTTCTCAGTAGCTTTCAAGTTCATGTCTAAAAGTGGTGAGAAATGGGAAAGAGATTTCACCATTTCAAGAATGGTGAATGGTTGTGATGGTAATTCTGATTTCTACATTCTGTTCTATGGGTCTAAAAACTGGCCATACATCACCTAG

mRNA sequence

ATGAAGAAATTAGGATATATTCCAGACACAAAGTATGGGCCTCATCATATGGAATCTGAACACAAAGAATATGCCTTGTCTACTCACAGTGATGAGCTTGCAGTTGGGTTTGGGCTAATGAAGCTCTGGGGAAAAATTATTCGGCTGACAACTCTGCATATGACATCATCGAATAATTTCTCAGTAGCTTTCAAGTTCATGTCTAAAAGTGGTGAGAAATGGGAAAGAGATTTCACCATTTCAAGAATGGTGAATGGTTGTGATGGTAATTCTGATTTCTACATTCTGTTCTATGGGTCTAAAAACTGGCCATACATCACCTAG

Coding sequence (CDS)

ATGAAGAAATTAGGATATATTCCAGACACAAAGTATGGGCCTCATCATATGGAATCTGAACACAAAGAATATGCCTTGTCTACTCACAGTGATGAGCTTGCAGTTGGGTTTGGGCTAATGAAGCTCTGGGGAAAAATTATTCGGCTGACAACTCTGCATATGACATCATCGAATAATTTCTCAGTAGCTTTCAAGTTCATGTCTAAAAGTGGTGAGAAATGGGAAAGAGATTTCACCATTTCAAGAATGGTGAATGGTTGTGATGGTAATTCTGATTTCTACATTCTGTTCTATGGGTCTAAAAACTGGCCATACATCACCTAG

Protein sequence

MKKLGYIPDTKYGPHHMESEHKEYALSTHSDELAVGFGLMKLWGKIIRLTTLHMTSSNNFSVAFKFMSKSGEKWERDFTISRMVNGCDGNSDFYILFYGSKNWPYIT
Homology
[Close]
BLAST of HG10004808 vs. NCBI nr
Match: XP_022144208.1 (pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia] >XP_022144209.1 pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia] >XP_022144210.1 pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia] >XP_022144211.1 pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia] >XP_022144212.1 pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia] >XP_022144213.1 pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia] >XP_022144365.1 pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia] >XP_022144367.1 pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia] >XP_022144368.1 pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia] >XP_022144369.1 pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia] >XP_022144370.1 pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia] >XP_022144371.1 pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia] >XP_022144372.1 pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia] >XP_022144373.1 pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia])

HSP 1 Score: 82.8 bits (203), Expect = 2.0e-12
Identity = 46/70 (65.71%), Postives = 53/70 (75.71%), Query Frame = 0 

Query: 1   MKKLGYIPDTKYGPHHMESEHKEYALSTHSDELAVGFGLMKL-WGKIIRLTTLHMTSSNN 60
           MKKLGYIPDTKY  H MESEHKEYALSTHS++LAVGFGLMKL  G  +R+   ++    +
Sbjct: 701 MKKLGYIPDTKYVLHDMESEHKEYALSTHSEKLAVGFGLMKLPKGATVRVFK-NLRICGD 760

Query: 61  FSVAFKFMSK 70
              AFKFMSK
Sbjct: 761 CHNAFKFMSK 769

[Close]
BLAST of HG10004808 vs. NCBI nr
Match: XP_038886633.1 (pentatricopeptide repeat-containing protein At1g25360-like [Benincasa hispida])

HSP 1 Score: 82.0 bits (201), Expect = 3.4e-12
Identity = 45/70 (64.29%), Postives = 53/70 (75.71%), Query Frame = 0 

Query: 1   MKKLGYIPDTKYGPHHMESEHKEYALSTHSDELAVGFGLMKL-WGKIIRLTTLHMTSSNN 60
           MKKLGYIPDTKY  H MESEHKEYALSTHS++LAVGFGLMKL  G  +R+   ++    +
Sbjct: 701 MKKLGYIPDTKYVLHDMESEHKEYALSTHSEKLAVGFGLMKLPQGATVRVFK-NLRICGD 760

Query: 61  FSVAFKFMSK 70
              AFKFMS+
Sbjct: 761 CHNAFKFMSR 769

[Close]
BLAST of HG10004808 vs. NCBI nr
Match: PON80768.1 (DYW domain containing protein [Parasponia andersonii])

HSP 1 Score: 80.5 bits (197), Expect = 9.8e-12
Identity = 52/109 (47.71%), Postives = 67/109 (61.47%), Query Frame = 0 

Query: 1   MKKLGYIPDTKYGPHHMESEHKEYALSTHSDELAVGFGLMKL-WGKIIRLTTLHMTSSNN 60
           MKKLGYIPDTKY   +MESE KEYALSTHS++LAVGFGLMKL  G  IR+   ++    +
Sbjct: 709 MKKLGYIPDTKYVLRNMESELKEYALSTHSEKLAVGFGLMKLPPGATIRVFK-NLRICVD 768

Query: 61  FSVAFKFMSKSGEKWERDFTISRMVNGCDGNSDFYILFYGSK----NWP 105
              AFKF+S+ G++      I  M  G +  +D  + FY  +     WP
Sbjct: 769 CHSAFKFISRLGKR--EIIAIVAMAEGVNAFADSMVGFYHGRLLNIEWP 814

[Close]
BLAST of HG10004808 vs. NCBI nr
Match: XP_010271478.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g25360 [Nelumbo nucifera] >DAD40421.1 TPA_asm: hypothetical protein HUJ06_014744 [Nelumbo nucifera])

HSP 1 Score: 79.0 bits (193), Expect = 2.8e-11
Identity = 43/74 (58.11%), Postives = 54/74 (72.97%), Query Frame = 0 

Query: 1   MKKLGYIPDTKYGPHHMESEHKEYALSTHSDELAVGFGLMKL-WGKIIRLTTLHMTSSNN 60
           M+KLGYIPDTKY  H +ESEHKEYALSTHS++LAV FGL+KL  G  +R+   ++    +
Sbjct: 705 MRKLGYIPDTKYVLHDVESEHKEYALSTHSEKLAVAFGLLKLPRGATVRVLK-NLRICGD 764

Query: 61  FSVAFKFMSKSGEK 74
              AFKFMSK  E+
Sbjct: 765 CHTAFKFMSKVVER 777

[Close]
BLAST of HG10004808 vs. NCBI nr
Match: KAG7020472.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 78.6 bits (192), Expect = 3.7e-11
Identity = 43/70 (61.43%), Postives = 51/70 (72.86%), Query Frame = 0 

Query: 1   MKKLGYIPDTKYGPHHMESEHKEYALSTHSDELAVGFGLMKL-WGKIIRLTTLHMTSSNN 60
           MKK GY+PDTKY  H MESEHKEYAL+THS+ LAVGFGLMKL  G  +R+   ++    +
Sbjct: 701 MKKAGYVPDTKYVLHDMESEHKEYALATHSERLAVGFGLMKLPPGATVRVFK-NLRICGD 760

Query: 61  FSVAFKFMSK 70
              AFKFMSK
Sbjct: 761 CHNAFKFMSK 769

[Close]
BLAST of HG10004808 vs. ExPASy Swiss-Prot
Match: Q9FRI5 (Pentatricopeptide repeat-containing protein At1g25360 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H74 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 5.8e-07
Identity = 25/43 (58.14%), Postives = 35/43 (81.40%), Query Frame = 0 

Query: 1   MKKLGYIPDTKYGPHHMESE-HKEYALSTHSDELAVGFGLMKL 43
           M++LGY+PDT +  H +ES+ HKE  L+THS+++AV FGLMKL
Sbjct: 693 MRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKL 735

[Close]
BLAST of HG10004808 vs. ExPASy Swiss-Prot
Match: Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 4.9e-06
Identity = 27/69 (39.13%), Postives = 39/69 (56.52%), Query Frame = 0 

Query: 1   MKKLGYIPDTKYGPHHMESEHKEYALSTHSDELAVGFGLMKLWGKIIRLTTLHMTSSNNF 60
           +KK+GY+PDT    H +E E KE  L  HS++LA+ FGL+    K       ++   N+ 
Sbjct: 690 IKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDC 749

Query: 61  SVAFKFMSK 70
             A KF+SK
Sbjct: 750 HTAIKFISK 758

[Close]
BLAST of HG10004808 vs. ExPASy Swiss-Prot
Match: Q7Y211 (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 1.1e-05
Identity = 28/70 (40.00%), Postives = 44/70 (62.86%), Query Frame = 0 

Query: 1   MKKLGYIPDTKYGPHHMESEHKEYALSTHSDELAVGFGLMKLW-GKIIRLTTLHMTSSNN 60
           M+K GY+PDT    H++E + KE  L  HS++LA+ FG++    G IIR+   ++   N+
Sbjct: 794 MRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAK-NLRVCND 853

Query: 61  FSVAFKFMSK 70
             +A KF+SK
Sbjct: 854 CHLATKFISK 862

[Close]
BLAST of HG10004808 vs. ExPASy Swiss-Prot
Match: Q9ZVF4 (Pentatricopeptide repeat-containing protein At2g01510, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H37 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 7.1e-05
Identity = 21/41 (51.22%), Postives = 31/41 (75.61%), Query Frame = 0 

Query: 1   MKKLGYIPDTKYGPHHMESEHKEYALSTHSDELAVGFGLMK 42
           ++K+GY+PDT    H +E E KE +LS HS++LA+ FGL+K
Sbjct: 488 IRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIK 528

[Close]
BLAST of HG10004808 vs. ExPASy Swiss-Prot
Match: P93011 (Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H6 PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 2.7e-04
Identity = 25/67 (37.31%), Postives = 40/67 (59.70%), Query Frame = 0 

Query: 2   KKLGYIPDTKYGPHHMESEHKEYALSTHSDELAVGFGLMKLWGKIIRLTTLHMTSSNNFS 61
           K++GY P ++   H +E E KE+AL  HS++LAV FGL+K     I +   ++    +  
Sbjct: 489 KEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVDVAITIVK-NLRICEDCH 548

Query: 62  VAFKFMS 69
            AFK++S
Sbjct: 549 SAFKYIS 554

[Close]
BLAST of HG10004808 vs. ExPASy TrEMBL
Match: A0A6J1CRF6 (pentatricopeptide repeat-containing protein At1g25360-like OS=Momordica charantia OX=3673 GN=LOC111014069 PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 9.5e-13
Identity = 46/70 (65.71%), Postives = 53/70 (75.71%), Query Frame = 0 

Query: 1   MKKLGYIPDTKYGPHHMESEHKEYALSTHSDELAVGFGLMKL-WGKIIRLTTLHMTSSNN 60
           MKKLGYIPDTKY  H MESEHKEYALSTHS++LAVGFGLMKL  G  +R+   ++    +
Sbjct: 701 MKKLGYIPDTKYVLHDMESEHKEYALSTHSEKLAVGFGLMKLPKGATVRVFK-NLRICGD 760

Query: 61  FSVAFKFMSK 70
              AFKFMSK
Sbjct: 761 CHNAFKFMSK 769

[Close]
BLAST of HG10004808 vs. ExPASy TrEMBL
Match: A0A2P5E5D9 (DYW domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_003240 PE=3 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 4.7e-12
Identity = 52/109 (47.71%), Postives = 67/109 (61.47%), Query Frame = 0 

Query: 1   MKKLGYIPDTKYGPHHMESEHKEYALSTHSDELAVGFGLMKL-WGKIIRLTTLHMTSSNN 60
           MKKLGYIPDTKY   +MESE KEYALSTHS++LAVGFGLMKL  G  IR+   ++    +
Sbjct: 709 MKKLGYIPDTKYVLRNMESELKEYALSTHSEKLAVGFGLMKLPPGATIRVFK-NLRICVD 768

Query: 61  FSVAFKFMSKSGEKWERDFTISRMVNGCDGNSDFYILFYGSK----NWP 105
              AFKF+S+ G++      I  M  G +  +D  + FY  +     WP
Sbjct: 769 CHSAFKFISRLGKR--EIIAIVAMAEGVNAFADSMVGFYHGRLLNIEWP 814

[Close]
BLAST of HG10004808 vs. ExPASy TrEMBL
Match: A0A1U8AXN7 (pentatricopeptide repeat-containing protein At1g25360 OS=Nelumbo nucifera OX=4432 GN=LOC104607518 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.4e-11
Identity = 43/74 (58.11%), Postives = 54/74 (72.97%), Query Frame = 0 

Query: 1   MKKLGYIPDTKYGPHHMESEHKEYALSTHSDELAVGFGLMKL-WGKIIRLTTLHMTSSNN 60
           M+KLGYIPDTKY  H +ESEHKEYALSTHS++LAV FGL+KL  G  +R+   ++    +
Sbjct: 705 MRKLGYIPDTKYVLHDVESEHKEYALSTHSEKLAVAFGLLKLPRGATVRVLK-NLRICGD 764

Query: 61  FSVAFKFMSKSGEK 74
              AFKFMSK  E+
Sbjct: 765 CHTAFKFMSKVVER 777

[Close]
BLAST of HG10004808 vs. ExPASy TrEMBL
Match: A0A5A7VDN1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005030 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.8e-11
Identity = 44/70 (62.86%), Postives = 51/70 (72.86%), Query Frame = 0 

Query: 1   MKKLGYIPDTKYGPHHMESEHKEYALSTHSDELAVGFGLMKL-WGKIIRLTTLHMTSSNN 60
           MKKLGYIPDTKY  H MESEHKEYALSTHS++LAV FGLMKL  G  +R+   ++    +
Sbjct: 701 MKKLGYIPDTKYVLHDMESEHKEYALSTHSEKLAVAFGLMKLPQGATVRVFK-NLRICGD 760

Query: 61  FSVAFKFMSK 70
              A KFMSK
Sbjct: 761 CHNAIKFMSK 769

[Close]
BLAST of HG10004808 vs. ExPASy TrEMBL
Match: A0A6J1GGL5 (pentatricopeptide repeat-containing protein At1g25360-like OS=Cucurbita moschata OX=3662 GN=LOC111454019 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.8e-11
Identity = 43/70 (61.43%), Postives = 51/70 (72.86%), Query Frame = 0 

Query: 1   MKKLGYIPDTKYGPHHMESEHKEYALSTHSDELAVGFGLMKL-WGKIIRLTTLHMTSSNN 60
           MKK GY+PDTKY  H MESEHKEYAL+THS+ LAVGFGLMKL  G  +R+   ++    +
Sbjct: 701 MKKAGYVPDTKYVLHDMESEHKEYALATHSERLAVGFGLMKLPPGATVRVFK-NLRICGD 760

Query: 61  FSVAFKFMSK 70
              AFKFMSK
Sbjct: 761 CHNAFKFMSK 769

[Close]
BLAST of HG10004808 vs. TAIR 10
Match: AT1G25360.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 55.1 bits (131), Expect = 4.1e-08
Identity = 25/43 (58.14%), Postives = 35/43 (81.40%), Query Frame = 0 

Query: 1   MKKLGYIPDTKYGPHHMESE-HKEYALSTHSDELAVGFGLMKL 43
           M++LGY+PDT +  H +ES+ HKE  L+THS+++AV FGLMKL
Sbjct: 693 MRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKL 735

[Close]
BLAST of HG10004808 vs. TAIR 10
Match: AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 52.0 bits (123), Expect = 3.5e-07
Identity = 27/69 (39.13%), Postives = 39/69 (56.52%), Query Frame = 0 

Query: 1   MKKLGYIPDTKYGPHHMESEHKEYALSTHSDELAVGFGLMKLWGKIIRLTTLHMTSSNNF 60
           +KK+GY+PDT    H +E E KE  L  HS++LA+ FGL+    K       ++   N+ 
Sbjct: 690 IKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDC 749

Query: 61  SVAFKFMSK 70
             A KF+SK
Sbjct: 750 HTAIKFISK 758

[Close]
BLAST of HG10004808 vs. TAIR 10
Match: AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 50.8 bits (120), Expect = 7.7e-07
Identity = 28/70 (40.00%), Postives = 44/70 (62.86%), Query Frame = 0 

Query: 1   MKKLGYIPDTKYGPHHMESEHKEYALSTHSDELAVGFGLMKLW-GKIIRLTTLHMTSSNN 60
           M+K GY+PDT    H++E + KE  L  HS++LA+ FG++    G IIR+   ++   N+
Sbjct: 794 MRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAK-NLRVCND 853

Query: 61  FSVAFKFMSK 70
             +A KF+SK
Sbjct: 854 CHLATKFISK 862

[Close]
BLAST of HG10004808 vs. TAIR 10
Match: AT2G01510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 48.1 bits (113), Expect = 5.0e-06
Identity = 21/41 (51.22%), Postives = 31/41 (75.61%), Query Frame = 0 

Query: 1   MKKLGYIPDTKYGPHHMESEHKEYALSTHSDELAVGFGLMK 42
           ++K+GY+PDT    H +E E KE +LS HS++LA+ FGL+K
Sbjct: 488 IRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIK 528

[Close]
BLAST of HG10004808 vs. TAIR 10
Match: AT2G33760.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 46.2 bits (108), Expect = 1.9e-05
Identity = 25/67 (37.31%), Postives = 40/67 (59.70%), Query Frame = 0 

Query: 2   KKLGYIPDTKYGPHHMESEHKEYALSTHSDELAVGFGLMKLWGKIIRLTTLHMTSSNNFS 61
           K++GY P ++   H +E E KE+AL  HS++LAV FGL+K     I +   ++    +  
Sbjct: 489 KEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVDVAITIVK-NLRICEDCH 548

Query: 62  VAFKFMS 69
            AFK++S
Sbjct: 549 SAFKYIS 554

The following BLAST results are available for this feature:
BLAST of HG10004808 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022144208.12.0e-1265.71pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia]... [more]
XP_038886633.13.4e-1264.29pentatricopeptide repeat-containing protein At1g25360-like [Benincasa hispida][more]
PON80768.19.8e-1247.71DYW domain containing protein [Parasponia andersonii][more]
XP_010271478.12.8e-1158.11PREDICTED: pentatricopeptide repeat-containing protein At1g25360 [Nelumbo nucife... [more]
KAG7020472.13.7e-1161.43Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
BLAST of HG10004808 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FRI55.8e-0758.14Pentatricopeptide repeat-containing protein At1g25360 OS=Arabidopsis thaliana OX... [more]
Q9SHZ84.9e-0639.13Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... [more]
Q7Y2111.1e-0540.00Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... [more]
Q9ZVF47.1e-0551.22Pentatricopeptide repeat-containing protein At2g01510, mitochondrial OS=Arabidop... [more]
P930112.7e-0437.31Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana OX... [more]
BLAST of HG10004808 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CRF69.5e-1365.71pentatricopeptide repeat-containing protein At1g25360-like OS=Momordica charanti... [more]
A0A2P5E5D94.7e-1247.71DYW domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_003... [more]
A0A1U8AXN71.4e-1158.11pentatricopeptide repeat-containing protein At1g25360 OS=Nelumbo nucifera OX=443... [more]
A0A5A7VDN11.8e-1162.86Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1GGL51.8e-1161.43pentatricopeptide repeat-containing protein At1g25360-like OS=Cucurbita moschata... [more]
BLAST of HG10004808 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G25360.14.1e-0858.14Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G22070.13.5e-0739.13pentatricopeptide (PPR) repeat-containing protein [more]
AT3G57430.17.7e-0740.00Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G01510.15.0e-0651.22Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G33760.11.9e-0537.31Pentatricopeptide repeat (PPR) superfamily protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10004808.1HG10004808.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009451 RNA modification
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0003723 RNA binding