Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAGAATCCAGTCGTTTCGATGAGGCCAAAATCAAACGGAGCAAACAGCTTCGTCATTCACGTGAAGGATGATCAAGAGGACTACAGAGGAGGAAGTCCCGCCGCAAGCATCACTCCCGCGAGGATTCTGAGCCGGATCCGCCGTGTTCTGATGCGATTCATATTCTATTTTCCTTCTCGAGGTTCGTCGTCGTCGCCGTCGGCATTTATGGCGTCGAAGCAGAGAAATCTGGAGAAATTCGAGCCGCCGAAGACTTCCTGTAGTTCGAATTACTCGTCTTACTCGCATTACAACGAAGCCATTGCCGATTGTATTGAGTTCTTCAACAAGTCGTCGCAGGATCAAATCGGCGTCGACGAAGGCAGAATCTCCGATGCAAATGCGATGGTATGA
mRNA sequence
ATGAAGAAGAATCCAGTCGTTTCGATGAGGCCAAAATCAAACGGAGCAAACAGCTTCGTCATTCACGTGAAGGATGATCAAGAGGACTACAGAGGAGGAAGTCCCGCCGCAAGCATCACTCCCGCGAGGATTCTGAGCCGGATCCGCCGTGTTCTGATGCGATTCATATTCTATTTTCCTTCTCGAGGTTCGTCGTCGTCGCCGTCGGCATTTATGGCGTCGAAGCAGAGAAATCTGGAGAAATTCGAGCCGCCGAAGACTTCCTGTAGTTCGAATTACTCGTCTTACTCGCATTACAACGAAGCCATTGCCGATTGTATTGAGTTCTTCAACAAGTCGTCGCAGGATCAAATCGGCGTCGACGAAGGCAGAATCTCCGATGCAAATGCGATGGTATGA
Coding sequence (CDS)
ATGAAGAAGAATCCAGTCGTTTCGATGAGGCCAAAATCAAACGGAGCAAACAGCTTCGTCATTCACGTGAAGGATGATCAAGAGGACTACAGAGGAGGAAGTCCCGCCGCAAGCATCACTCCCGCGAGGATTCTGAGCCGGATCCGCCGTGTTCTGATGCGATTCATATTCTATTTTCCTTCTCGAGGTTCGTCGTCGTCGCCGTCGGCATTTATGGCGTCGAAGCAGAGAAATCTGGAGAAATTCGAGCCGCCGAAGACTTCCTGTAGTTCGAATTACTCGTCTTACTCGCATTACAACGAAGCCATTGCCGATTGTATTGAGTTCTTCAACAAGTCGTCGCAGGATCAAATCGGCGTCGACGAAGGCAGAATCTCCGATGCAAATGCGATGGTATGA
Protein sequence
MKKNPVVSMRPKSNGANSFVIHVKDDQEDYRGGSPAASITPARILSRIRRVLMRFIFYFPSRGSSSSPSAFMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIGVDEGRISDANAMV
Homology
BLAST of HG10004786 vs. NCBI nr
Match:
KAA0065168.1 (hypothetical protein E6C27_scaffold82G005050 [Cucumis melo var. makuwa])
HSP 1 Score: 224.9 bits (572), Expect = 4.0e-55
Identity = 113/133 (84.96%), Postives = 122/133 (91.73%), Query Frame = 0
Query: 3 KNPVVSMRPKSNGANSFVIHVKDDQEDYRGGSPAASITPARILSRIRRVLMRFIFYFPSR 62
KNP VS RPKSNGAN+FVIHVKDDQ+DYRGGSPA I+PARI+SRIRRVLMRFIFY PSR
Sbjct: 2 KNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPSR 61
Query: 63 GSSSSPSA---FMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIG 122
GSS++ +A F A KQ+NLEKFEPPKTSCSS+YSSYSHYNEAIADCIEFFNKSSQDQIG
Sbjct: 62 GSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQIG 121
Query: 123 VDEGRISDANAMV 133
VDEGRISDANAMV
Sbjct: 122 VDEGRISDANAMV 134
BLAST of HG10004786 vs. NCBI nr
Match:
XP_022996993.1 (uncharacterized protein LOC111492057 [Cucurbita maxima])
HSP 1 Score: 219.9 bits (559), Expect = 1.3e-53
Identity = 112/133 (84.21%), Postives = 121/133 (90.98%), Query Frame = 0
Query: 1 MKKNPVVSMRPKSNGANSFVIHVKDDQEDYRGGSPAASITPARILSRIRRVLMRFIFYFP 60
M+KNP VS+RPKSNGANSF+I+V+DDQEDYRGGSP SI+P R LSRIRR+LMRF+FYFP
Sbjct: 1 MEKNPAVSIRPKSNGANSFIINVEDDQEDYRGGSPGVSISPVRFLSRIRRILMRFMFYFP 60
Query: 61 SRGSSSSP-SAFMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIG 120
SRGSSSSP S+ MASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIG
Sbjct: 61 SRGSSSSPSSSIMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIG 120
Query: 121 VDEGRISDANAMV 133
ISDANAMV
Sbjct: 121 -----ISDANAMV 128
BLAST of HG10004786 vs. NCBI nr
Match:
KAE8652124.1 (hypothetical protein Csa_022629 [Cucumis sativus])
HSP 1 Score: 219.5 bits (558), Expect = 1.7e-53
Identity = 110/129 (85.27%), Postives = 118/129 (91.47%), Query Frame = 0
Query: 3 KNPVVSMRPKSNGANSFVIHVKDDQEDYRGGSPAASITPARILSRIRRVLMRFIFYFPSR 62
KNP VS RPKSNGANSFV+HVKDDQ+DYRGGSPA I+PARILSRIRRV MRFIFY PSR
Sbjct: 2 KNPAVSTRPKSNGANSFVVHVKDDQDDYRGGSPAERISPARILSRIRRVFMRFIFYLPSR 61
Query: 63 GSSSSPSAFMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIGVDE 122
GS+++ +A A KQRNLEKFEPPKTSCSS+YSSYSHYNEAIADCIEF NKSSQDQIGVDE
Sbjct: 62 GSAAAAAA--ALKQRNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFLNKSSQDQIGVDE 121
Query: 123 GRISDANAM 132
GRISDANAM
Sbjct: 122 GRISDANAM 128
BLAST of HG10004786 vs. NCBI nr
Match:
KAG7029433.1 (hypothetical protein SDJN02_07772, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 213.8 bits (543), Expect = 9.1e-52
Identity = 110/133 (82.71%), Postives = 120/133 (90.23%), Query Frame = 0
Query: 1 MKKNPVVSMRPKSNGANSFVIHVKDDQEDYRGGSPAASITPARILSRIRRVLMRFIFYFP 60
M+KNP VS+R KSNGANSF+I+V+DDQEDYRGGSP SI+PAR LSRIRR+LMRF+FYFP
Sbjct: 1 MEKNPAVSIRQKSNGANSFIINVEDDQEDYRGGSPGVSISPARFLSRIRRILMRFMFYFP 60
Query: 61 SRGSS-SSPSAFMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIG 120
SRGSS SS S+ MASK+RNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIG
Sbjct: 61 SRGSSPSSSSSIMASKRRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIG 120
Query: 121 VDEGRISDANAMV 133
ISDANAMV
Sbjct: 121 -----ISDANAMV 128
BLAST of HG10004786 vs. NCBI nr
Match:
KAG6598497.1 (hypothetical protein SDJN03_08275, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 213.8 bits (543), Expect = 9.1e-52
Identity = 110/133 (82.71%), Postives = 120/133 (90.23%), Query Frame = 0
Query: 1 MKKNPVVSMRPKSNGANSFVIHVKDDQEDYRGGSPAASITPARILSRIRRVLMRFIFYFP 60
M+KNP VS+R KSNGANSF+I+V+DDQED+RGGSP SI+PAR LSRIRR+LMRF+FYFP
Sbjct: 1 MEKNPAVSIRQKSNGANSFIINVEDDQEDFRGGSPGVSISPARFLSRIRRILMRFMFYFP 60
Query: 61 SRGSS-SSPSAFMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIG 120
SRGSS SS S+ MASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIG
Sbjct: 61 SRGSSPSSSSSIMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIG 120
Query: 121 VDEGRISDANAMV 133
ISDANAMV
Sbjct: 121 -----ISDANAMV 128
BLAST of HG10004786 vs. ExPASy TrEMBL
Match:
A0A5A7VC16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005050 PE=4 SV=1)
HSP 1 Score: 224.9 bits (572), Expect = 1.9e-55
Identity = 113/133 (84.96%), Postives = 122/133 (91.73%), Query Frame = 0
Query: 3 KNPVVSMRPKSNGANSFVIHVKDDQEDYRGGSPAASITPARILSRIRRVLMRFIFYFPSR 62
KNP VS RPKSNGAN+FVIHVKDDQ+DYRGGSPA I+PARI+SRIRRVLMRFIFY PSR
Sbjct: 2 KNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPSR 61
Query: 63 GSSSSPSA---FMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIG 122
GSS++ +A F A KQ+NLEKFEPPKTSCSS+YSSYSHYNEAIADCIEFFNKSSQDQIG
Sbjct: 62 GSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQIG 121
Query: 123 VDEGRISDANAMV 133
VDEGRISDANAMV
Sbjct: 122 VDEGRISDANAMV 134
BLAST of HG10004786 vs. ExPASy TrEMBL
Match:
A0A0A0LPF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368240 PE=4 SV=1)
HSP 1 Score: 221.1 bits (562), Expect = 2.8e-54
Identity = 111/130 (85.38%), Postives = 119/130 (91.54%), Query Frame = 0
Query: 3 KNPVVSMRPKSNGANSFVIHVKDDQEDYRGGSPAASITPARILSRIRRVLMRFIFYFPSR 62
KNP VS RPKSNGANSFV+HVKDDQ+DYRGGSPA I+PARILSRIRRV MRFIFY PSR
Sbjct: 2 KNPAVSTRPKSNGANSFVVHVKDDQDDYRGGSPAERISPARILSRIRRVFMRFIFYLPSR 61
Query: 63 GSSSSPSAFMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIGVDE 122
GS+++ +A A KQRNLEKFEPPKTSCSS+YSSYSHYNEAIADCIEF NKSSQDQIGVDE
Sbjct: 62 GSAAAAAA--ALKQRNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFLNKSSQDQIGVDE 121
Query: 123 GRISDANAMV 133
GRISDANAMV
Sbjct: 122 GRISDANAMV 129
BLAST of HG10004786 vs. ExPASy TrEMBL
Match:
A0A6J1KCK5 (uncharacterized protein LOC111492057 OS=Cucurbita maxima OX=3661 GN=LOC111492057 PE=4 SV=1)
HSP 1 Score: 219.9 bits (559), Expect = 6.2e-54
Identity = 112/133 (84.21%), Postives = 121/133 (90.98%), Query Frame = 0
Query: 1 MKKNPVVSMRPKSNGANSFVIHVKDDQEDYRGGSPAASITPARILSRIRRVLMRFIFYFP 60
M+KNP VS+RPKSNGANSF+I+V+DDQEDYRGGSP SI+P R LSRIRR+LMRF+FYFP
Sbjct: 1 MEKNPAVSIRPKSNGANSFIINVEDDQEDYRGGSPGVSISPVRFLSRIRRILMRFMFYFP 60
Query: 61 SRGSSSSP-SAFMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIG 120
SRGSSSSP S+ MASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIG
Sbjct: 61 SRGSSSSPSSSIMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIG 120
Query: 121 VDEGRISDANAMV 133
ISDANAMV
Sbjct: 121 -----ISDANAMV 128
BLAST of HG10004786 vs. ExPASy TrEMBL
Match:
A0A6J1CRC4 (uncharacterized protein LOC111014042 OS=Momordica charantia OX=3673 GN=LOC111014042 PE=4 SV=1)
HSP 1 Score: 189.1 bits (479), Expect = 1.2e-44
Identity = 102/131 (77.86%), Postives = 112/131 (85.50%), Query Frame = 0
Query: 3 KNPVVSMRPKSNGANSFVIHVKDDQEDYRGGSPAASITPARILSRIRRVLMRFIFYFPSR 62
+NP V + K NGA+ FVIHV+ DQEDYRGGS S++PARILSRIRR+ MRFIFYFPSR
Sbjct: 5 ENPTVPISHKPNGADGFVIHVR-DQEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSR 64
Query: 63 GSSSSPSAFMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSS-QDQIGVD 122
GSSSSP MAS+QRNLEKFEPPKTSCSSNYSSYSHY+EAIADCIEFFNKSS Q+QIGV
Sbjct: 65 GSSSSP--IMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFNKSSLQEQIGVG 124
Query: 123 EGRISDANAMV 133
GR SD NAMV
Sbjct: 125 -GRNSDGNAMV 131
BLAST of HG10004786 vs. ExPASy TrEMBL
Match:
A0A6A1UVD7 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR8G002767 PE=4 SV=1)
HSP 1 Score: 114.0 bits (284), Expect = 4.8e-22
Identity = 64/127 (50.39%), Postives = 85/127 (66.93%), Query Frame = 0
Query: 9 MRPKSNGANSFVIHVKDDQEDYRGGSP--------AASITPARILSRIRRVLMRFIFYFP 68
M A SFVI V+ + R +P + + ++ +R R++LMR +F P
Sbjct: 1 MHKHRRAAESFVIQVRGCEAVDRHQAPHQTSVDSSEFNFSAMKLFNRFRKILMRLLFSLP 60
Query: 69 SRGSSSSPSAFMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIGV 128
SRGSS++ S AS+Q+N ++FEPPKTSCSS YSS+SHYNEAIADCIEFFNKSS D+I +
Sbjct: 61 SRGSSAA-SGMTASRQKNCDRFEPPKTSCSSYYSSHSHYNEAIADCIEFFNKSSHDEI-L 120
BLAST of HG10004786 vs. TAIR 10
Match:
AT1G75717.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 64.3 bits (155), Expect = 8.3e-11
Identity = 39/84 (46.43%), Postives = 54/84 (64.29%), Query Frame = 0
Query: 43 RILSRIRRVLMRFIFYFPSRGSSSSPSAFMASKQRNLEKFEPPKTSCSSN-YSSYSHYNE 102
++ ++ ++LMR I + + SSS S+ + E+FEPPK SCSS+ YSS+ HY+E
Sbjct: 2 KLFHKLGKILMRLIDF--TLHSSSRRQKKNNSRSGDGERFEPPKISCSSSYYSSHVHYSE 61
Query: 103 AIADCIEFFNKSSQDQIGVDEGRI 126
AIADCIEFFNKSS E R+
Sbjct: 62 AIADCIEFFNKSSAMSCEDHEARL 83
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0065168.1 | 4.0e-55 | 84.96 | hypothetical protein E6C27_scaffold82G005050 [Cucumis melo var. makuwa] | [more] |
| XP_022996993.1 | 1.3e-53 | 84.21 | uncharacterized protein LOC111492057 [Cucurbita maxima] | [more] |
| KAE8652124.1 | 1.7e-53 | 85.27 | hypothetical protein Csa_022629 [Cucumis sativus] | [more] |
| KAG7029433.1 | 9.1e-52 | 82.71 | hypothetical protein SDJN02_07772, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAG6598497.1 | 9.1e-52 | 82.71 | hypothetical protein SDJN03_08275, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7VC16 | 1.9e-55 | 84.96 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A0A0LPF9 | 2.8e-54 | 85.38 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368240 PE=4 SV=1 | [more] |
| A0A6J1KCK5 | 6.2e-54 | 84.21 | uncharacterized protein LOC111492057 OS=Cucurbita maxima OX=3661 GN=LOC111492057... | [more] |
| A0A6J1CRC4 | 1.2e-44 | 77.86 | uncharacterized protein LOC111014042 OS=Momordica charantia OX=3673 GN=LOC111014... | [more] |
| A0A6A1UVD7 | 4.8e-22 | 50.39 | Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR8G002767 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G75717.1 | 8.3e-11 | 46.43 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
