Homology
BLAST of HG10004783 vs. NCBI nr
Match:
XP_038886633.1 (pentatricopeptide repeat-containing protein At1g25360-like [Benincasa hispida])
HSP 1 Score: 711.1 bits (1834), Expect = 6.1e-201
Identity = 415/797 (52.07%), Postives = 430/797 (53.95%), Query Frame = 0
Query: 1 MRNALDVRILANRYAAQLQLCAPQNPSSFSLARTVHAHMIASGFKPRGHLVNRLLDIYWK 60
MRNALDVR+LANRYAAQLQLC PQNPSS+SLARTVHAHMIASGFKPRGHLVNRLLDIYWK
Sbjct: 1 MRNALDVRVLANRYAAQLQLCCPQNPSSYSLARTVHAHMIASGFKPRGHLVNRLLDIYWK 60
Query: 61 SSNFIYARQLFDEIPHPDAVARTTLITAYSALGNLNMAREIFNGTPLNMRDTIFYNAMIT 120
SS+F+ ARQLFDEIPHPDAVARTTLI+AYSALGNLNMAR+IFNGTPLNMRDTIFYNAMIT
Sbjct: 61 SSDFVCARQLFDEIPHPDAVARTTLISAYSALGNLNMARDIFNGTPLNMRDTIFYNAMIT 120
Query: 121 GYSHKDDGYSAIELFHAMRRANFQPDDFTFTSVLSALALIVDGEHQCGQMHGAVVKFGVG 180
YSHKDDG+SAIELFHAMRRANFQPDDFTFTSVLSALALIVD EHQCGQMHGAVVKFG+G
Sbjct: 121 AYSHKDDGHSAIELFHAMRRANFQPDDFTFTSVLSALALIVDDEHQCGQMHGAVVKFGIG 180
Query: 181 LISSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPERDELTWTTLITGYVRNDDLT 240
L+SSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPERDELTWTTLITGYVRNDDLT
Sbjct: 181 LVSSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPERDELTWTTLITGYVRNDDLT 240
Query: 241 GARELLDTMTEPLGVAWNAMISGYVHHSLFEDALTLFRKMRLLGVQHDEFTYTSVISACA 300
GARELLDTMTE L VAWNAMISGYVHH LFEDALTLFRKMRLLGVQHDEFTYTSVISACA
Sbjct: 241 GARELLDTMTEHLSVAWNAMISGYVHHGLFEDALTLFRKMRLLGVQHDEFTYTSVISACA 300
Query: 301 N----------------------------------------------------------- 360
N
Sbjct: 301 NGGFFQLGKEVHAYILKNELNPNHDFLLSVSNALITLYWKYGKVDGARKIFYEMPVKDIV 360
Query: 361 --------------------------------------GLAQNGFGEEGLKLFNQMRLDG 420
GLAQNGFGEE LKLFNQMRLDG
Sbjct: 361 SWNAILSGYVNAGRMEDAKSFFAQMPEKCLLTWTVIISGLAQNGFGEESLKLFNQMRLDG 420
Query: 421 YEPCDYAFAGVVTACSVLGALENGRQLHAQIVHLGHDSSLSVGNAMISI----------- 440
YEPCDYAFAG +TACSVLGALENGRQLHAQIVHLGH+SSLSVGNAMIS+
Sbjct: 421 YEPCDYAFAGAITACSVLGALENGRQLHAQIVHLGHNSSLSVGNAMISMYARCGVVEAAR 480
BLAST of HG10004783 vs. NCBI nr
Match:
XP_023537093.1 (pentatricopeptide repeat-containing protein At1g25360-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 695.3 bits (1793), Expect = 3.4e-196
Identity = 400/766 (52.22%), Postives = 420/766 (54.83%), Query Frame = 0
Query: 1 MRNALDVRILANRYAAQLQLCAPQNPSSFSLARTVHAHMIASGFKPRGHLVNRLLDIYWK 60
MRNA+DVR+LANRYAAQLQLC PQNPSSFSLARTVHAHMI SGFKPRGHLVNRLLDIYWK
Sbjct: 1 MRNAIDVRVLANRYAAQLQLCCPQNPSSFSLARTVHAHMIVSGFKPRGHLVNRLLDIYWK 60
Query: 61 SSNFIYARQLFDEIPHPDAVARTTLITAYSALGNLNMAREIFNGTPLNMRDTIFYNAMIT 120
SSN +YARQLFDEIP+PDAVARTTLITAYS LGNLNMAREIFNGTPLNMRDTIFYNAMIT
Sbjct: 61 SSNLVYARQLFDEIPNPDAVARTTLITAYSNLGNLNMAREIFNGTPLNMRDTIFYNAMIT 120
Query: 121 GYSHKDDGYSAIELFHAMRRANFQPDDFTFTSVLSALALIVDGEHQCGQMHGAVVKFGVG 180
G+SH DG+SAI LFHAMRR+NF+PDDFTFTSVLSALALIVD E QCGQMHGAVVK G G
Sbjct: 121 GFSHNVDGHSAIGLFHAMRRSNFRPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKSGTG 180
Query: 181 LISSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPERDELTWTTLITGYVRNDDLT 240
L+SSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMP+RDELTWTTLITGYVRNDDL
Sbjct: 181 LVSSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRNDDLN 240
Query: 241 GARELLDTMTEPLGVAWNAMISGYVHHSLFEDALTLFRKMRLLGVQHDEFTYTSVISACA 300
GARELLDTMTE LGVAWNAMISGYVHH LFEDALTLFRKMR LGV+ DEFTYTSVISACA
Sbjct: 241 GARELLDTMTEKLGVAWNAMISGYVHHGLFEDALTLFRKMRFLGVELDEFTYTSVISACA 300
Query: 301 N----------------------------------------------------------- 360
N
Sbjct: 301 NGGFFQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGRMEEAKSFFAQMPEKSLL 360
Query: 361 -------GLAQNGFGEEGLKLFNQMRLDGYEPCDYAFAGVVTACSVLGALENGRQLHAQI 420
GLAQNGFGEEGL LFN+MRLDGYEPCDYAFAG +TACSVLG+LENGRQLHAQ+
Sbjct: 361 TWTVMISGLAQNGFGEEGLNLFNRMRLDGYEPCDYAFAGAITACSVLGSLENGRQLHAQL 420
Query: 421 VHLGHDSSLSVGNAMISI------------------------------------------ 440
+HLGHDSSLS+GNAMIS+
Sbjct: 421 IHLGHDSSLSIGNAMISMYARCGVVEAARSVFLTMPFVDSVSWNAMIAALGQHGHGVKAT 480
BLAST of HG10004783 vs. NCBI nr
Match:
XP_022951057.1 (pentatricopeptide repeat-containing protein At1g25360-like [Cucurbita moschata])
HSP 1 Score: 683.3 bits (1762), Expect = 1.4e-192
Identity = 400/797 (50.19%), Postives = 420/797 (52.70%), Query Frame = 0
Query: 1 MRNALDVRILANRYAAQLQLCAPQNPSSFSLARTVHAHMIASGFKPRGHLVNRLLDIYWK 60
MRNA+DVR+LANRYAAQLQLC PQNPSSFSLARTVHAHMI SGFKPRGHLVNRLLDIYWK
Sbjct: 1 MRNAIDVRVLANRYAAQLQLCCPQNPSSFSLARTVHAHMIVSGFKPRGHLVNRLLDIYWK 60
Query: 61 SSNFIYARQLFDEIPHPDAVARTTLITAYSALGNLNMAREIFNGTPLNMRDTIFYNAMIT 120
SSN +YARQLFDEIP+PDAVARTTLITAYS LGNLNMAREIFNGTPLNMRDTIFYNAMIT
Sbjct: 61 SSNLVYARQLFDEIPNPDAVARTTLITAYSNLGNLNMAREIFNGTPLNMRDTIFYNAMIT 120
Query: 121 GYSHKDDGYSAIELFHAMRRANFQPDDFTFTSVLSALALIVDGEHQCGQMHGAVVKFGVG 180
G+SH DG+SAI LFHAMRR+NF+PDDFTFTSVLSALALIVD E QCGQMHGAVVK G G
Sbjct: 121 GFSHNVDGHSAIGLFHAMRRSNFRPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKSGTG 180
Query: 181 LISSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPERDELTWTTLITGYVRNDDLT 240
L+SSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMP+RDELTWTTLITGYVRNDDL
Sbjct: 181 LVSSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRNDDLN 240
Query: 241 GARELLDTMTEPLGVAWNAMISGYVHHSLFEDALTLFRKMRLLGVQHDEFTYTSVISACA 300
GARELLDTMTE LGVAWNAMISGYVHH LFEDALTLFRKMR LGV+ DEFTYTSVISACA
Sbjct: 241 GARELLDTMTEKLGVAWNAMISGYVHHGLFEDALTLFRKMRFLGVELDEFTYTSVISACA 300
Query: 301 N----------------------------------------------------------- 360
N
Sbjct: 301 NGGFFQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGKVDGARHIFYEMPVKDIV 360
Query: 361 --------------------------------------GLAQNGFGEEGLKLFNQMRLDG 420
GLAQNGFGEEGL LFN+MRLDG
Sbjct: 361 SWNAILSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEEGLNLFNRMRLDG 420
Query: 421 YEPCDYAFAGVVTACSVLGALENGRQLHAQIVHLGHDSSLSVGNAMISI----------- 440
YEPCDYAFAG +TACSVLG+LENGRQLHAQ++HLGHDSSLS+GNAMIS+
Sbjct: 421 YEPCDYAFAGAITACSVLGSLENGRQLHAQLIHLGHDSSLSIGNAMISMYARCGVVEAAR 480
BLAST of HG10004783 vs. NCBI nr
Match:
KAG7020472.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 682.2 bits (1759), Expect = 3.0e-192
Identity = 399/797 (50.06%), Postives = 421/797 (52.82%), Query Frame = 0
Query: 1 MRNALDVRILANRYAAQLQLCAPQNPSSFSLARTVHAHMIASGFKPRGHLVNRLLDIYWK 60
MRNA+DVR+LANRYAAQLQLC PQNPSSFSLARTVHAHMI SGFKPRGHLVNRLLDIYWK
Sbjct: 1 MRNAIDVRVLANRYAAQLQLCCPQNPSSFSLARTVHAHMIVSGFKPRGHLVNRLLDIYWK 60
Query: 61 SSNFIYARQLFDEIPHPDAVARTTLITAYSALGNLNMAREIFNGTPLNMRDTIFYNAMIT 120
SSN ++ARQLFDEIP+PDAVARTTLITAYS LGNLNMAREIFNGTPLNMRDTIFYNAMIT
Sbjct: 61 SSNLVHARQLFDEIPNPDAVARTTLITAYSNLGNLNMAREIFNGTPLNMRDTIFYNAMIT 120
Query: 121 GYSHKDDGYSAIELFHAMRRANFQPDDFTFTSVLSALALIVDGEHQCGQMHGAVVKFGVG 180
G+SH DG+SAI LFHAMRR+NF+PDDFTFTSVLSALALIVD E QCGQMHGAVVK G G
Sbjct: 121 GFSHNVDGHSAIGLFHAMRRSNFRPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKSGTG 180
Query: 181 LISSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPERDELTWTTLITGYVRNDDLT 240
L+SSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMP+RDELTWTTLITGYVRNDDL
Sbjct: 181 LVSSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRNDDLN 240
Query: 241 GARELLDTMTEPLGVAWNAMISGYVHHSLFEDALTLFRKMRLLGVQHDEFTYTSVISACA 300
GARELLDTMTE LGVAWNAMISGYVHH LFEDALTLFRKMRL+GV+ DEFTYTSVISACA
Sbjct: 241 GARELLDTMTEKLGVAWNAMISGYVHHGLFEDALTLFRKMRLIGVELDEFTYTSVISACA 300
Query: 301 N----------------------------------------------------------- 360
N
Sbjct: 301 NGGFFQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGKVDGARHIFYEMPVKDIV 360
Query: 361 --------------------------------------GLAQNGFGEEGLKLFNQMRLDG 420
GLAQNGFGEEGL LFN+MRLDG
Sbjct: 361 SWNAILSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEEGLNLFNRMRLDG 420
Query: 421 YEPCDYAFAGVVTACSVLGALENGRQLHAQIVHLGHDSSLSVGNAMISI----------- 440
YEPCDYAFAG +TACSVLG+LENGRQLHAQ++HLGHDSSLS+GNAMIS+
Sbjct: 421 YEPCDYAFAGAITACSVLGSLENGRQLHAQLIHLGHDSSLSIGNAMISMYARCGVVEAAR 480
BLAST of HG10004783 vs. NCBI nr
Match:
KAG6585558.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 682.2 bits (1759), Expect = 3.0e-192
Identity = 399/797 (50.06%), Postives = 421/797 (52.82%), Query Frame = 0
Query: 1 MRNALDVRILANRYAAQLQLCAPQNPSSFSLARTVHAHMIASGFKPRGHLVNRLLDIYWK 60
MRNA+DVR+LANRYAAQLQLC PQNPSSFSLARTVHAHMI SGFKPRGHLVNRLLDIYWK
Sbjct: 1 MRNAIDVRVLANRYAAQLQLCCPQNPSSFSLARTVHAHMIVSGFKPRGHLVNRLLDIYWK 60
Query: 61 SSNFIYARQLFDEIPHPDAVARTTLITAYSALGNLNMAREIFNGTPLNMRDTIFYNAMIT 120
SSN ++ARQLFDEIP+PDAVARTTLITAYS LGNLNMAREIFNGTPLNMRDTIFYNAMIT
Sbjct: 61 SSNLVHARQLFDEIPNPDAVARTTLITAYSNLGNLNMAREIFNGTPLNMRDTIFYNAMIT 120
Query: 121 GYSHKDDGYSAIELFHAMRRANFQPDDFTFTSVLSALALIVDGEHQCGQMHGAVVKFGVG 180
G+SH DG+SAI LFHAMRR+NF+PDDFTFTSVLSALALIVD E QCGQMHGAVVK G G
Sbjct: 121 GFSHNVDGHSAIGLFHAMRRSNFRPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKSGTG 180
Query: 181 LISSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPERDELTWTTLITGYVRNDDLT 240
L+SSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMP+RDELTWTTLITGYVRNDDL
Sbjct: 181 LVSSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRNDDLN 240
Query: 241 GARELLDTMTEPLGVAWNAMISGYVHHSLFEDALTLFRKMRLLGVQHDEFTYTSVISACA 300
GARELLDTMTE LGVAWNAMISGYVHH LFEDALTLFRKMRL+GV+ DEFTYTSVISACA
Sbjct: 241 GARELLDTMTEKLGVAWNAMISGYVHHGLFEDALTLFRKMRLIGVELDEFTYTSVISACA 300
Query: 301 N----------------------------------------------------------- 360
N
Sbjct: 301 NGGFFQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGKVDGARHIFYEMPVKDIV 360
Query: 361 --------------------------------------GLAQNGFGEEGLKLFNQMRLDG 420
GLAQNGFGEEGL LFN+MRLDG
Sbjct: 361 SWNAILSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEEGLNLFNRMRLDG 420
Query: 421 YEPCDYAFAGVVTACSVLGALENGRQLHAQIVHLGHDSSLSVGNAMISI----------- 440
YEPCDYAFAG +TACSVLG+LENGRQLHAQ++HLGHDSSLS+GNAMIS+
Sbjct: 421 YEPCDYAFAGAITACSVLGSLENGRQLHAQLIHLGHDSSLSIGNAMISMYARCGVVEAAR 480
BLAST of HG10004783 vs. ExPASy Swiss-Prot
Match:
Q9FRI5 (Pentatricopeptide repeat-containing protein At1g25360 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H74 PE=2 SV=1)
HSP 1 Score: 402.1 bits (1032), Expect = 7.9e-111
Identity = 257/788 (32.61%), Postives = 335/788 (42.51%), Query Frame = 0
Query: 7 VRILANRYAAQLQLCAPQNPSSFSLARTVHAHMIASGFKPRGHLVNRLLDIYWKSSNFIY 66
VR +ANRYAA L+LC P +S LAR VH ++I GF+PR H++NRL+D+Y KSS Y
Sbjct: 8 VRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNY 67
Query: 67 ARQLFDEIPHPDAVARTTLITAYSALGNLNMAREIFNGTPLNMRDTIFYNAMITGYSHKD 126
ARQLFDEI PD +ARTT+++ Y A G++ +AR +F P+ MRDT+ YNAMITG+SH +
Sbjct: 68 ARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNN 127
Query: 127 DGYSAIELFHAMRRANFQPDDFTFTSVLSALALIVDGEHQCGQMHGAVVKFGVGLISSVL 186
DGYSAI LF M+ F+PD+FTF SVL+ LAL+ D E QC Q H A +K G G I+SV
Sbjct: 128 DGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVS 187
Query: 187 NALLSVYVKCASSPLVSSSSLMASARKLFDEMPERDELTWTTLITGYVRNDDLTGARELL 246
NAL+SVY KCASSP SL+ SARK+FDE+ E+DE +WTT++TGYV+N ELL
Sbjct: 188 NALVSVYSKCASSP-----SLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELL 247
Query: 247 DTMTEPLG-VAWNAMISGYVHHSLFEDALTLFRKMRLLGVQHDEFTYTSVISACA----- 306
+ M + + VA+NAMISGYV+ +++AL + R+M G++ DEFTY SVI ACA
Sbjct: 248 EGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLL 307
Query: 307 ------------------------------------------------------------ 366
Sbjct: 308 QLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYV 367
Query: 367 ---------------------------NGLAQNGFGEEGLKLFNQMRLDGYEPCDYAFAG 426
+GLA+NGFGEEGLKLF+ M+ +G+EPCDYAF+G
Sbjct: 368 SSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSG 427
Query: 427 VVTACSVLGALENGRQLHAQIVHLGHDSSLSVGNAMISI--------------------- 440
+ +C+VLGA NG+Q HAQ++ +G DSSLS GNA+I++
Sbjct: 428 AIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLD 487
BLAST of HG10004783 vs. ExPASy Swiss-Prot
Match:
Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)
HSP 1 Score: 187.2 bits (474), Expect = 4.0e-46
Identity = 146/528 (27.65%), Postives = 230/528 (43.56%), Query Frame = 0
Query: 6 DVRILANRYAAQLQLCAPQNPSSFSLARTVHAHMIASGFKPRGHLVNRLLDIYWKSSNFI 65
D + +R+ L A N + + +H+H++ +GF G ++N L+ +Y +
Sbjct: 272 DSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVE 331
Query: 66 YARQLFDEIPHPDAVAR--TTLITAYSALGNLNMAREIFNGTPLNMRDTIFYNAMITGYS 125
AR+L ++ D T L+ Y LG++N A+ IF L RD + + AMI GY
Sbjct: 332 TARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIF--VSLKDRDVVAWTAMIVGYE 391
Query: 126 HKDDGYSAIELFHAMRRANFQPDDFTFTSVLSALALIVDGEHQCGQMHGAVVKFGVGLIS 185
AI LF +M +P+ +T ++LS + + H Q+HG+ VK G
Sbjct: 392 QHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHG-KQIHGSAVKSGEIYSV 451
Query: 186 SVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMP-ERDELTWTTLITGYVRNDDLTGA 245
SV NAL+++Y K + + SA + FD + ERD ++WT++I ++ A
Sbjct: 452 SVSNALITMYAKAGN---------ITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEA 511
Query: 246 RELLDTM----TEPLGVAWNAMISGYVHHSLFEDALTLFRKMR----------------- 305
EL +TM P + + + S H L F M+
Sbjct: 512 LELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVD 571
Query: 306 LLG----------------VQHDEFTYTSVISAC-------------------------- 365
L G ++ D T+ S++SAC
Sbjct: 572 LFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGA 631
Query: 366 ----ANGLAQNGFGEEGLKLFNQMRLDGYEPCDYAFAGVVTACSV-LGALENG------- 425
AN + G EE K+ M+ DG + F+ + V + +E+G
Sbjct: 632 YSALANLYSACGKWEEAAKIRKSMK-DGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNE 691
Query: 426 -----RQLHAQIVHLG---------HDSSLSVGNAMI--SIEKLAVGFGLMKLPEGATVR 440
+++ +I +G HD V ++ EKLA+ FGL+ P+ T+R
Sbjct: 692 IYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLR 751
BLAST of HG10004783 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 181.8 bits (460), Expect = 1.7e-44
Identity = 140/632 (22.15%), Postives = 242/632 (38.29%), Query Frame = 0
Query: 5 LDVRILANRYAAQLQLCAPQNPSSFSLARTVHAHMIASGFKPRGHLVNRLLDIYWKSSNF 64
+ + +L N Y L + +F + +H H++ G ++ L+ +Y ++
Sbjct: 126 ISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRL 185
Query: 65 IYARQLFDEIPHPDAVARTTLITAYSALGNLNMAREIFNGTPLNMRDTIFYNAMITGYSH 124
A ++FD+ PH D V+ T LI Y++ G + A+++F+ P ++D + +NAMI+GY+
Sbjct: 186 EDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIP--VKDVVSWNAMISGYAE 245
Query: 125 KDDGYSAIELFHAMRRANFQPDDFTFTSVLSALALIVDGEHQCG-QMHGAVVKFGVGLIS 184
+ A+ELF M + N +PD+ T +V+SA A G + G Q+H + G G
Sbjct: 246 TGNYKEALELFKDMMKTNVRPDESTMVTVVSACA--QSGSIELGRQVHLWIDDHGFGSNL 305
Query: 185 SVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPERDELTWTTLITGYVR-------- 244
++NAL+ +Y KC + +A LF+ +P +D ++W TLI GY
Sbjct: 306 KIVNALIDLYSKCGE---------LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEAL 365
Query: 245 -------------ND--------------------------------------------- 304
ND
Sbjct: 366 LLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLID 425
Query: 305 ------DLTGARELLDTMTEPLGVAWNAMISGYVHHSLFEDALTLFRKMRLLGVQHDEFT 364
D+ A ++ +++ +WNAMI G+ H + + LF +MR +G+Q D+ T
Sbjct: 426 MYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDIT 485
Query: 365 YTSVISACANG--------------------------------LAQNGFGEEGLKLFNQM 424
+ ++SAC++ L +G +E ++ N M
Sbjct: 486 FVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMM 545
Query: 425 RLDGYEPCDYAFAGVVTACSVLGALENGRQLHAQIVHLGHD------------------- 440
+ EP + ++ AC + G +E G ++ + +
Sbjct: 546 EM---EPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWN 605
BLAST of HG10004783 vs. ExPASy Swiss-Prot
Match:
O23169 (Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H5 PE=3 SV=1)
HSP 1 Score: 175.3 bits (443), Expect = 1.6e-42
Identity = 147/625 (23.52%), Postives = 246/625 (39.36%), Query Frame = 0
Query: 11 ANRYAAQLQLCAPQNPSSFSLARTVHAHMIASGFKPRGHLVNRLLDIYWKSSNFIYARQL 70
A+ Y +Q+C+ + + VH H+ SGF P + NRLL +Y K + + AR++
Sbjct: 85 ASTYCNLIQVCS--QTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 144
Query: 71 FDEIPHPDAVARTTLITAYSALGNLNMAREIFNGTPLNMRDTIFYNAMITGYSHKDDGYS 130
FDE+P+ D + ++ Y+ +G L AR++F+ + +D+ + AM+TGY KD
Sbjct: 145 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFD--EMTEKDSYSWTAMVTGYVKKDQPEE 204
Query: 131 AIELFHAMRRA-NFQPDDFTFTSVLSALALIVDGEHQCGQMHGAVVKFGVGLISSVLNAL 190
A+ L+ M+R N +P+ FT S+ A A V + ++HG +V+ G+ + ++L
Sbjct: 205 ALVLYSLMQRVPNSRPNIFT-VSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSL 264
Query: 191 LSVYVKCASSPLVSSSSLMASARKLFDEMPERDELTWTTLITGYVRND------------ 250
+ +Y KC + AR +FD++ E+D ++WT++I Y ++
Sbjct: 265 MDMYGKC---------GCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSEL 324
Query: 251 --------------------DLT------------------------------------- 310
DLT
Sbjct: 325 VGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNI 384
Query: 311 -GARELLDTMTEPLGVAWNAMISGYVHHSLFEDALTLFRKMRLLGVQHDEFTYTSVISAC 370
A+ ++D +P V+W ++I G + ++AL F + G + D T+ +V+SAC
Sbjct: 385 ESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSAC 444
Query: 371 ANGLAQNGFGEEGLKLF----NQMRL----DGY-------------------------EP 430
+ G E+GL+ F + RL D Y +P
Sbjct: 445 THA----GLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKP 504
Query: 431 CDYAFAGVVTACSVLGALENGRQLHAQI-------------------------------- 440
+ +A V+ CS G ++ + ++
Sbjct: 505 SKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRK 564
BLAST of HG10004783 vs. ExPASy Swiss-Prot
Match:
Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 167.9 bits (424), Expect = 2.5e-40
Identity = 134/555 (24.14%), Postives = 217/555 (39.10%), Query Frame = 0
Query: 12 NRYAAQLQLCAPQNPSSFSLARTVHAHMIASGFKPRGHLVNRLLDIYWKSSNFIYARQLF 71
N Y L A N S+F +HA + G++ + VN L++ Y + NF A LF
Sbjct: 114 NAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLF 173
Query: 72 DEIPHPDAVARTTLITAYSALGNLNMAREIFNGTPLNMRDTIFYNAMITGYSHKDDGYSA 131
D IP PD V+ ++I Y G +++A +F + ++ I + MI+GY D A
Sbjct: 174 DRIPEPDDVSWNSVIKGYVKAGKMDIALTLFR--KMAEKNAISWTTMISGYVQADMNKEA 233
Query: 132 IELFHAMRRANFQPDDFTFTSVLSALALIVDGEHQCGQ-MHGAVVKFGVGLISSVLNALL 191
++LFH M+ ++ +PD+ + + LSA A + G + G+ +H + K + + S + L+
Sbjct: 234 LQLFHEMQNSDVEPDNVSLANALSACAQL--GALEQGKWIHSYLNKTRIRMDSVLGCVLI 293
Query: 192 SVYVKCASSPLVSSSSLMASARKLFDEMPERDELTWTTLITGYVRNDDLTGARELLDTMT 251
+Y KC EM E A E+ +
Sbjct: 294 DMYAKCG-------------------EMEE---------------------ALEVFKNIK 353
Query: 252 EPLGVAWNAMISGYVHHSLFEDALTLFRKMRLLGVQHDEFTYTSVISACANGLAQNGFGE 311
+ AW A+ISGY +H +A++ F +M+ +G++ + T+T+V++AC + G E
Sbjct: 354 KKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTAC----SYTGLVE 413
Query: 312 EGLKLFNQMRLD-GYEPCDYAFAGVVTACSVLGALEN-----------------GRQLHA 371
EG +F M D +P + +V G L+ G L A
Sbjct: 414 EGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 473
Query: 372 QIVHLGHDSSLSVGNAMISI---------------------------------------- 431
+H + +G +I+I
Sbjct: 474 CRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVP 533
Query: 432 ------------------------------------------------------------ 440
Sbjct: 534 GCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDER 593
BLAST of HG10004783 vs. ExPASy TrEMBL
Match:
A0A6J1GGL5 (pentatricopeptide repeat-containing protein At1g25360-like OS=Cucurbita moschata OX=3662 GN=LOC111454019 PE=3 SV=1)
HSP 1 Score: 683.3 bits (1762), Expect = 6.6e-193
Identity = 400/797 (50.19%), Postives = 420/797 (52.70%), Query Frame = 0
Query: 1 MRNALDVRILANRYAAQLQLCAPQNPSSFSLARTVHAHMIASGFKPRGHLVNRLLDIYWK 60
MRNA+DVR+LANRYAAQLQLC PQNPSSFSLARTVHAHMI SGFKPRGHLVNRLLDIYWK
Sbjct: 1 MRNAIDVRVLANRYAAQLQLCCPQNPSSFSLARTVHAHMIVSGFKPRGHLVNRLLDIYWK 60
Query: 61 SSNFIYARQLFDEIPHPDAVARTTLITAYSALGNLNMAREIFNGTPLNMRDTIFYNAMIT 120
SSN +YARQLFDEIP+PDAVARTTLITAYS LGNLNMAREIFNGTPLNMRDTIFYNAMIT
Sbjct: 61 SSNLVYARQLFDEIPNPDAVARTTLITAYSNLGNLNMAREIFNGTPLNMRDTIFYNAMIT 120
Query: 121 GYSHKDDGYSAIELFHAMRRANFQPDDFTFTSVLSALALIVDGEHQCGQMHGAVVKFGVG 180
G+SH DG+SAI LFHAMRR+NF+PDDFTFTSVLSALALIVD E QCGQMHGAVVK G G
Sbjct: 121 GFSHNVDGHSAIGLFHAMRRSNFRPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKSGTG 180
Query: 181 LISSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPERDELTWTTLITGYVRNDDLT 240
L+SSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMP+RDELTWTTLITGYVRNDDL
Sbjct: 181 LVSSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRNDDLN 240
Query: 241 GARELLDTMTEPLGVAWNAMISGYVHHSLFEDALTLFRKMRLLGVQHDEFTYTSVISACA 300
GARELLDTMTE LGVAWNAMISGYVHH LFEDALTLFRKMR LGV+ DEFTYTSVISACA
Sbjct: 241 GARELLDTMTEKLGVAWNAMISGYVHHGLFEDALTLFRKMRFLGVELDEFTYTSVISACA 300
Query: 301 N----------------------------------------------------------- 360
N
Sbjct: 301 NGGFFQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGKVDGARHIFYEMPVKDIV 360
Query: 361 --------------------------------------GLAQNGFGEEGLKLFNQMRLDG 420
GLAQNGFGEEGL LFN+MRLDG
Sbjct: 361 SWNAILSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEEGLNLFNRMRLDG 420
Query: 421 YEPCDYAFAGVVTACSVLGALENGRQLHAQIVHLGHDSSLSVGNAMISI----------- 440
YEPCDYAFAG +TACSVLG+LENGRQLHAQ++HLGHDSSLS+GNAMIS+
Sbjct: 421 YEPCDYAFAGAITACSVLGSLENGRQLHAQLIHLGHDSSLSIGNAMISMYARCGVVEAAR 480
BLAST of HG10004783 vs. ExPASy TrEMBL
Match:
A0A6J1CRF6 (pentatricopeptide repeat-containing protein At1g25360-like OS=Momordica charantia OX=3673 GN=LOC111014069 PE=3 SV=1)
HSP 1 Score: 679.9 bits (1753), Expect = 7.2e-192
Identity = 396/797 (49.69%), Postives = 420/797 (52.70%), Query Frame = 0
Query: 1 MRNALDVRILANRYAAQLQLCAPQNPSSFSLARTVHAHMIASGFKPRGHLVNRLLDIYWK 60
MRN+L +R++ANRYAAQLQLC PQNPSSFSLARTVHAHMIASGFKPRGHLVNRLLD+YWK
Sbjct: 1 MRNSLGIRVVANRYAAQLQLCCPQNPSSFSLARTVHAHMIASGFKPRGHLVNRLLDVYWK 60
Query: 61 SSNFIYARQLFDEIPHPDAVARTTLITAYSALGNLNMAREIFNGTPLNMRDTIFYNAMIT 120
SSN +YARQLFDEIP+PDAVARTTLITAYSA+GNL++AR IFNGTPL MRDTIFYNAMIT
Sbjct: 61 SSNLVYARQLFDEIPNPDAVARTTLITAYSAVGNLSLARAIFNGTPLVMRDTIFYNAMIT 120
Query: 121 GYSHKDDGYSAIELFHAMRRANFQPDDFTFTSVLSALALIVDGEHQCGQMHGAVVKFGVG 180
GYSH DDG+SA+ELFHAMRR NFQPDDFTFTSVLSALALIVD E QC Q+HGAVVK G G
Sbjct: 121 GYSHNDDGHSALELFHAMRRGNFQPDDFTFTSVLSALALIVDNEQQCSQIHGAVVKSGTG 180
Query: 181 LISSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPERDELTWTTLITGYVRNDDLT 240
L+SSVLNALLSVYVKCASSPLV SSSLMASARKLFDEMPERDELTWTT+ITGYVRNDDL
Sbjct: 181 LVSSVLNALLSVYVKCASSPLVLSSSLMASARKLFDEMPERDELTWTTMITGYVRNDDLN 240
Query: 241 GARELLDTMTEPLGVAWNAMISGYVHHSLFEDALTLFRKMRLLGVQHDEFTYTSVISACA 300
GA LLDTMTE LGVAWN+MISGYVHH LF++ALTLFRKMRLLGVQHDEFTYTSVISACA
Sbjct: 241 GAHGLLDTMTEKLGVAWNSMISGYVHHGLFQEALTLFRKMRLLGVQHDEFTYTSVISACA 300
Query: 301 N----------------------------------------------------------- 360
N
Sbjct: 301 NGGFFQLGKQVHAYILKNELNPNHDFILSVSNALITLYWKFGKVDGARKIFYEMPIKDIV 360
Query: 361 --------------------------------------GLAQNGFGEEGLKLFNQMRLDG 420
GLAQNGFGEEGLKLFNQMRLDG
Sbjct: 361 TWNAILSGYVNSGRMEEAKSFFVEMPEKNLLTWTVMISGLAQNGFGEEGLKLFNQMRLDG 420
Query: 421 YEPCDYAFAGVVTACSVLGALENGRQLHAQIVHLGHDSSLSVGNAMISI----------- 440
YEPCDYAFAG +TACSVLGALENGRQLHAQ++HLGHDSSLSVGNAMIS+
Sbjct: 421 YEPCDYAFAGAITACSVLGALENGRQLHAQLIHLGHDSSLSVGNAMISMYARCGVVEAAK 480
BLAST of HG10004783 vs. ExPASy TrEMBL
Match:
A0A6J1KSZ4 (pentatricopeptide repeat-containing protein At1g25360-like OS=Cucurbita maxima OX=3661 GN=LOC111496149 PE=3 SV=1)
HSP 1 Score: 670.6 bits (1729), Expect = 4.4e-189
Identity = 396/797 (49.69%), Postives = 416/797 (52.20%), Query Frame = 0
Query: 1 MRNALDVRILANRYAAQLQLCAPQNPSSFSLARTVHAHMIASGFKPRGHLVNRLLDIYWK 60
MRN +DVR+LANRYAAQLQLC PQN SSFSLARTVHAHMI SGFK RGHLVNRLLDIYWK
Sbjct: 1 MRNVIDVRVLANRYAAQLQLCCPQNSSSFSLARTVHAHMIVSGFKLRGHLVNRLLDIYWK 60
Query: 61 SSNFIYARQLFDEIPHPDAVARTTLITAYSALGNLNMAREIFNGTPLNMRDTIFYNAMIT 120
SSN +YARQLFDEIP+PDAVARTTLITAYS LGNLNMAREIFN TPLNMRDTIFYNAMIT
Sbjct: 61 SSNLVYARQLFDEIPNPDAVARTTLITAYSNLGNLNMAREIFNRTPLNMRDTIFYNAMIT 120
Query: 121 GYSHKDDGYSAIELFHAMRRANFQPDDFTFTSVLSALALIVDGEHQCGQMHGAVVKFGVG 180
G+SH DG+SAI LFHAMRR+NF+PDDFTFTSVLSALALIVD E QCGQMHGAVVK G G
Sbjct: 121 GFSHNVDGHSAIGLFHAMRRSNFRPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKSGTG 180
Query: 181 LISSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPERDELTWTTLITGYVRNDDLT 240
L+SSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMP+RDELTWTTLITGYVRNDDL
Sbjct: 181 LVSSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRNDDLN 240
Query: 241 GARELLDTMTEPLGVAWNAMISGYVHHSLFEDALTLFRKMRLLGVQHDEFTYTSVISACA 300
GARELLDTMTE LGVAWNAMISGYVHH LFEDALTLFRKMR LGV+ DEFTYTSVISACA
Sbjct: 241 GARELLDTMTEKLGVAWNAMISGYVHHGLFEDALTLFRKMRFLGVELDEFTYTSVISACA 300
Query: 301 N----------------------------------------------------------- 360
N
Sbjct: 301 NGGFFQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGKVDGARNIFYEMPVKDIV 360
Query: 361 --------------------------------------GLAQNGFGEEGLKLFNQMRLDG 420
GLAQNGFGEEGL LFN+MRLDG
Sbjct: 361 SWNAILSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEEGLNLFNRMRLDG 420
Query: 421 YEPCDYAFAGVVTACSVLGALENGRQLHAQIVHLGHDSSLSVGNAMISI----------- 440
YEPCDYAFAG +TACSVLG+LENGRQLHAQ+VHLGHDSSLS+GNAMIS+
Sbjct: 421 YEPCDYAFAGAITACSVLGSLENGRQLHAQLVHLGHDSSLSIGNAMISMYARCGVVEAAR 480
BLAST of HG10004783 vs. ExPASy TrEMBL
Match:
A0A1S4DVG9 (pentatricopeptide repeat-containing protein At1g25360-like OS=Cucumis melo OX=3656 GN=LOC103488043 PE=3 SV=1)
HSP 1 Score: 647.1 bits (1668), Expect = 5.2e-182
Identity = 373/742 (50.27%), Postives = 401/742 (54.04%), Query Frame = 0
Query: 1 MRNALDVRILANRYAAQLQLCAPQNPSSFSLARTVHAHMIASGFKPRGHLVNRLLDIYWK 60
MRN LDVR+LANRY AQL LC PQNPSS+SLARTVHAH+IASGFK RGH+VNRL+D+YWK
Sbjct: 1 MRNVLDVRVLANRYVAQLNLCCPQNPSSYSLARTVHAHVIASGFKLRGHIVNRLIDVYWK 60
Query: 61 SSNFIYARQLFDEIPHPDAVARTTLITAYSALGNLNMAREIFNGTPLNMRDTIFYNAMIT 120
SS+F+YARQLFDEIP PD +ARTTLITAYSALGNL MAREIFN TPL+MRDT+FYNAMIT
Sbjct: 61 SSDFVYARQLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMIT 120
Query: 121 GYSHKDDGYSAIELFHAMRRANFQPDDFTFTSVLSALALIVDGEHQCGQMHGAVVKFGVG 180
GYSH +DG+SAIELF AMR ANFQPDDFTF SVLSA LI D E QCGQMHGAVVK G+G
Sbjct: 121 GYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFDDERQCGQMHGAVVKSGIG 180
Query: 181 LISSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPERDELTWTTLITGYVRNDDLT 240
L +VLN+LLSVYVKCASSPLVSSSSLMASARKLFDEMP+R+E WTTLITGYVRNDDL
Sbjct: 181 LFPAVLNSLLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNDDLA 240
Query: 241 GARELLDTMTEPLGVAWNAMISGYVHHSLFEDALTLFRKMRLLGVQHDEFTYTSVISACA 300
ARE+LDTMTE G+AWNAMISGY+HH LFEDALTLFRKMRLLGVQ DE TYTSVISACA
Sbjct: 241 AAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQLDESTYTSVISACA 300
Query: 301 ------------------------------------------------------------ 360
Sbjct: 301 DGGFFLLGKQVHAYILKNELNPDRNFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDVI 360
Query: 361 -------------------------------------NGLAQNGFGEEGLKLFNQMRLDG 420
+GLAQNGFGE+ LKLFNQMRLDG
Sbjct: 361 SWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMRLDG 420
Query: 421 YEPCDYAFAGVVTACSVLGALENGRQLHAQIVHLGHDSSLSVGNAMISI----------- 440
YEP DYAFAG +TACSVLGALENGRQLHAQIVHLGHDS+LSVGNAMI++
Sbjct: 421 YEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGVVEAAR 480
BLAST of HG10004783 vs. ExPASy TrEMBL
Match:
A0A5A7VDN1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005030 PE=3 SV=1)
HSP 1 Score: 625.9 bits (1613), Expect = 1.2e-175
Identity = 373/797 (46.80%), Postives = 401/797 (50.31%), Query Frame = 0
Query: 1 MRNALDVRILANRYAAQLQLCAPQNPSSFSLARTVHAHMIASGFKPRGHLVNRLLDIYWK 60
MRN LDVR+LANRY AQL LC PQNPSS+SLARTVHAH+IASGFK RGH+VNRL+D+YWK
Sbjct: 1 MRNVLDVRVLANRYVAQLNLCCPQNPSSYSLARTVHAHVIASGFKLRGHIVNRLIDVYWK 60
Query: 61 SSNFIYARQLFDEIPHPDAVARTTLITAYSALGNLNMAREIFNGTPLNMRDTIFYNAMIT 120
SS+F+YARQLFDEIP PD +ARTTLITAYSALGNL MAREIFN TPL+MRDT+FYNAMIT
Sbjct: 61 SSDFVYARQLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMIT 120
Query: 121 GYSHKDDGYSAIELFHAMRRANFQPDDFTFTSVLSALALIVDGEHQCGQMHGAVVKFGVG 180
GYSH +DG+SAIELF AMR ANFQPDDFTF SVLSA LI D E QCGQMHGAVVK G+G
Sbjct: 121 GYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFDDERQCGQMHGAVVKSGIG 180
Query: 181 LISSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPERDELTWTTLITGYVRNDDLT 240
L +VLN+LLSVYVKCASSPLVSSSSLMASARKLFDEMP+R+E WTTLITGYVRNDDL
Sbjct: 181 LFPAVLNSLLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNDDLA 240
Query: 241 GARELLDTMTEPLGVAWNAMISGYVHHSLFEDALTLFRKMRLLGVQHDEFTYTSVISACA 300
ARE+LDTMTE G+AWNAMISGY+HH LFEDALTLFRKMRLLGVQ DE TYTSVISACA
Sbjct: 241 AAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQLDESTYTSVISACA 300
Query: 301 ------------------------------------------------------------ 360
Sbjct: 301 DGGFFLLGKQVHAYILKNELNPDRNFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDVI 360
Query: 361 -------------------------------------NGLAQNGFGEEGLKLFNQMRLDG 420
+GLAQNGFGE+ LKLFNQMRLDG
Sbjct: 361 SWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMRLDG 420
Query: 421 YEPCDYAFAGVVTACSVLGALENGRQLHAQIVHLGHDSSLSVGNAMISI----------- 440
YEP DYAFAG +TACSVLGALENGRQLHAQIVHLGHDS+LSVGNAMI++
Sbjct: 421 YEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGVVEAAR 480
BLAST of HG10004783 vs. TAIR 10
Match:
AT1G25360.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 402.1 bits (1032), Expect = 5.6e-112
Identity = 257/788 (32.61%), Postives = 335/788 (42.51%), Query Frame = 0
Query: 7 VRILANRYAAQLQLCAPQNPSSFSLARTVHAHMIASGFKPRGHLVNRLLDIYWKSSNFIY 66
VR +ANRYAA L+LC P +S LAR VH ++I GF+PR H++NRL+D+Y KSS Y
Sbjct: 8 VRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNY 67
Query: 67 ARQLFDEIPHPDAVARTTLITAYSALGNLNMAREIFNGTPLNMRDTIFYNAMITGYSHKD 126
ARQLFDEI PD +ARTT+++ Y A G++ +AR +F P+ MRDT+ YNAMITG+SH +
Sbjct: 68 ARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNN 127
Query: 127 DGYSAIELFHAMRRANFQPDDFTFTSVLSALALIVDGEHQCGQMHGAVVKFGVGLISSVL 186
DGYSAI LF M+ F+PD+FTF SVL+ LAL+ D E QC Q H A +K G G I+SV
Sbjct: 128 DGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVS 187
Query: 187 NALLSVYVKCASSPLVSSSSLMASARKLFDEMPERDELTWTTLITGYVRNDDLTGARELL 246
NAL+SVY KCASSP SL+ SARK+FDE+ E+DE +WTT++TGYV+N ELL
Sbjct: 188 NALVSVYSKCASSP-----SLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELL 247
Query: 247 DTMTEPLG-VAWNAMISGYVHHSLFEDALTLFRKMRLLGVQHDEFTYTSVISACA----- 306
+ M + + VA+NAMISGYV+ +++AL + R+M G++ DEFTY SVI ACA
Sbjct: 248 EGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLL 307
Query: 307 ------------------------------------------------------------ 366
Sbjct: 308 QLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYV 367
Query: 367 ---------------------------NGLAQNGFGEEGLKLFNQMRLDGYEPCDYAFAG 426
+GLA+NGFGEEGLKLF+ M+ +G+EPCDYAF+G
Sbjct: 368 SSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSG 427
Query: 427 VVTACSVLGALENGRQLHAQIVHLGHDSSLSVGNAMISI--------------------- 440
+ +C+VLGA NG+Q HAQ++ +G DSSLS GNA+I++
Sbjct: 428 AIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLD 487
BLAST of HG10004783 vs. TAIR 10
Match:
AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 187.2 bits (474), Expect = 2.8e-47
Identity = 146/528 (27.65%), Postives = 230/528 (43.56%), Query Frame = 0
Query: 6 DVRILANRYAAQLQLCAPQNPSSFSLARTVHAHMIASGFKPRGHLVNRLLDIYWKSSNFI 65
D + +R+ L A N + + +H+H++ +GF G ++N L+ +Y +
Sbjct: 272 DSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVE 331
Query: 66 YARQLFDEIPHPDAVAR--TTLITAYSALGNLNMAREIFNGTPLNMRDTIFYNAMITGYS 125
AR+L ++ D T L+ Y LG++N A+ IF L RD + + AMI GY
Sbjct: 332 TARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIF--VSLKDRDVVAWTAMIVGYE 391
Query: 126 HKDDGYSAIELFHAMRRANFQPDDFTFTSVLSALALIVDGEHQCGQMHGAVVKFGVGLIS 185
AI LF +M +P+ +T ++LS + + H Q+HG+ VK G
Sbjct: 392 QHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHG-KQIHGSAVKSGEIYSV 451
Query: 186 SVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMP-ERDELTWTTLITGYVRNDDLTGA 245
SV NAL+++Y K + + SA + FD + ERD ++WT++I ++ A
Sbjct: 452 SVSNALITMYAKAGN---------ITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEA 511
Query: 246 RELLDTM----TEPLGVAWNAMISGYVHHSLFEDALTLFRKMR----------------- 305
EL +TM P + + + S H L F M+
Sbjct: 512 LELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVD 571
Query: 306 LLG----------------VQHDEFTYTSVISAC-------------------------- 365
L G ++ D T+ S++SAC
Sbjct: 572 LFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGA 631
Query: 366 ----ANGLAQNGFGEEGLKLFNQMRLDGYEPCDYAFAGVVTACSV-LGALENG------- 425
AN + G EE K+ M+ DG + F+ + V + +E+G
Sbjct: 632 YSALANLYSACGKWEEAAKIRKSMK-DGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNE 691
Query: 426 -----RQLHAQIVHLG---------HDSSLSVGNAMI--SIEKLAVGFGLMKLPEGATVR 440
+++ +I +G HD V ++ EKLA+ FGL+ P+ T+R
Sbjct: 692 IYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLR 751
BLAST of HG10004783 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 181.8 bits (460), Expect = 1.2e-45
Identity = 140/632 (22.15%), Postives = 242/632 (38.29%), Query Frame = 0
Query: 5 LDVRILANRYAAQLQLCAPQNPSSFSLARTVHAHMIASGFKPRGHLVNRLLDIYWKSSNF 64
+ + +L N Y L + +F + +H H++ G ++ L+ +Y ++
Sbjct: 126 ISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRL 185
Query: 65 IYARQLFDEIPHPDAVARTTLITAYSALGNLNMAREIFNGTPLNMRDTIFYNAMITGYSH 124
A ++FD+ PH D V+ T LI Y++ G + A+++F+ P ++D + +NAMI+GY+
Sbjct: 186 EDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIP--VKDVVSWNAMISGYAE 245
Query: 125 KDDGYSAIELFHAMRRANFQPDDFTFTSVLSALALIVDGEHQCG-QMHGAVVKFGVGLIS 184
+ A+ELF M + N +PD+ T +V+SA A G + G Q+H + G G
Sbjct: 246 TGNYKEALELFKDMMKTNVRPDESTMVTVVSACA--QSGSIELGRQVHLWIDDHGFGSNL 305
Query: 185 SVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPERDELTWTTLITGYVR-------- 244
++NAL+ +Y KC + +A LF+ +P +D ++W TLI GY
Sbjct: 306 KIVNALIDLYSKCGE---------LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEAL 365
Query: 245 -------------ND--------------------------------------------- 304
ND
Sbjct: 366 LLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLID 425
Query: 305 ------DLTGARELLDTMTEPLGVAWNAMISGYVHHSLFEDALTLFRKMRLLGVQHDEFT 364
D+ A ++ +++ +WNAMI G+ H + + LF +MR +G+Q D+ T
Sbjct: 426 MYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDIT 485
Query: 365 YTSVISACANG--------------------------------LAQNGFGEEGLKLFNQM 424
+ ++SAC++ L +G +E ++ N M
Sbjct: 486 FVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMM 545
Query: 425 RLDGYEPCDYAFAGVVTACSVLGALENGRQLHAQIVHLGHD------------------- 440
+ EP + ++ AC + G +E G ++ + +
Sbjct: 546 EM---EPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWN 605
BLAST of HG10004783 vs. TAIR 10
Match:
AT4G37170.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 175.3 bits (443), Expect = 1.1e-43
Identity = 147/625 (23.52%), Postives = 246/625 (39.36%), Query Frame = 0
Query: 11 ANRYAAQLQLCAPQNPSSFSLARTVHAHMIASGFKPRGHLVNRLLDIYWKSSNFIYARQL 70
A+ Y +Q+C+ + + VH H+ SGF P + NRLL +Y K + + AR++
Sbjct: 85 ASTYCNLIQVCS--QTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 144
Query: 71 FDEIPHPDAVARTTLITAYSALGNLNMAREIFNGTPLNMRDTIFYNAMITGYSHKDDGYS 130
FDE+P+ D + ++ Y+ +G L AR++F+ + +D+ + AM+TGY KD
Sbjct: 145 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFD--EMTEKDSYSWTAMVTGYVKKDQPEE 204
Query: 131 AIELFHAMRRA-NFQPDDFTFTSVLSALALIVDGEHQCGQMHGAVVKFGVGLISSVLNAL 190
A+ L+ M+R N +P+ FT S+ A A V + ++HG +V+ G+ + ++L
Sbjct: 205 ALVLYSLMQRVPNSRPNIFT-VSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSL 264
Query: 191 LSVYVKCASSPLVSSSSLMASARKLFDEMPERDELTWTTLITGYVRND------------ 250
+ +Y KC + AR +FD++ E+D ++WT++I Y ++
Sbjct: 265 MDMYGKC---------GCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSEL 324
Query: 251 --------------------DLT------------------------------------- 310
DLT
Sbjct: 325 VGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNI 384
Query: 311 -GARELLDTMTEPLGVAWNAMISGYVHHSLFEDALTLFRKMRLLGVQHDEFTYTSVISAC 370
A+ ++D +P V+W ++I G + ++AL F + G + D T+ +V+SAC
Sbjct: 385 ESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSAC 444
Query: 371 ANGLAQNGFGEEGLKLF----NQMRL----DGY-------------------------EP 430
+ G E+GL+ F + RL D Y +P
Sbjct: 445 THA----GLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKP 504
Query: 431 CDYAFAGVVTACSVLGALENGRQLHAQI-------------------------------- 440
+ +A V+ CS G ++ + ++
Sbjct: 505 SKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRK 564
BLAST of HG10004783 vs. TAIR 10
Match:
AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 167.9 bits (424), Expect = 1.8e-41
Identity = 134/555 (24.14%), Postives = 217/555 (39.10%), Query Frame = 0
Query: 12 NRYAAQLQLCAPQNPSSFSLARTVHAHMIASGFKPRGHLVNRLLDIYWKSSNFIYARQLF 71
N Y L A N S+F +HA + G++ + VN L++ Y + NF A LF
Sbjct: 114 NAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLF 173
Query: 72 DEIPHPDAVARTTLITAYSALGNLNMAREIFNGTPLNMRDTIFYNAMITGYSHKDDGYSA 131
D IP PD V+ ++I Y G +++A +F + ++ I + MI+GY D A
Sbjct: 174 DRIPEPDDVSWNSVIKGYVKAGKMDIALTLFR--KMAEKNAISWTTMISGYVQADMNKEA 233
Query: 132 IELFHAMRRANFQPDDFTFTSVLSALALIVDGEHQCGQ-MHGAVVKFGVGLISSVLNALL 191
++LFH M+ ++ +PD+ + + LSA A + G + G+ +H + K + + S + L+
Sbjct: 234 LQLFHEMQNSDVEPDNVSLANALSACAQL--GALEQGKWIHSYLNKTRIRMDSVLGCVLI 293
Query: 192 SVYVKCASSPLVSSSSLMASARKLFDEMPERDELTWTTLITGYVRNDDLTGARELLDTMT 251
+Y KC EM E A E+ +
Sbjct: 294 DMYAKCG-------------------EMEE---------------------ALEVFKNIK 353
Query: 252 EPLGVAWNAMISGYVHHSLFEDALTLFRKMRLLGVQHDEFTYTSVISACANGLAQNGFGE 311
+ AW A+ISGY +H +A++ F +M+ +G++ + T+T+V++AC + G E
Sbjct: 354 KKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTAC----SYTGLVE 413
Query: 312 EGLKLFNQMRLD-GYEPCDYAFAGVVTACSVLGALEN-----------------GRQLHA 371
EG +F M D +P + +V G L+ G L A
Sbjct: 414 EGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 473
Query: 372 QIVHLGHDSSLSVGNAMISI---------------------------------------- 431
+H + +G +I+I
Sbjct: 474 CRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVP 533
Query: 432 ------------------------------------------------------------ 440
Sbjct: 534 GCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDER 593
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038886633.1 | 6.1e-201 | 52.07 | pentatricopeptide repeat-containing protein At1g25360-like [Benincasa hispida] | [more] |
XP_023537093.1 | 3.4e-196 | 52.22 | pentatricopeptide repeat-containing protein At1g25360-like [Cucurbita pepo subsp... | [more] |
XP_022951057.1 | 1.4e-192 | 50.19 | pentatricopeptide repeat-containing protein At1g25360-like [Cucurbita moschata] | [more] |
KAG7020472.1 | 3.0e-192 | 50.06 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
KAG6585558.1 | 3.0e-192 | 50.06 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
Match Name | E-value | Identity | Description | |
Q9FRI5 | 7.9e-111 | 32.61 | Pentatricopeptide repeat-containing protein At1g25360 OS=Arabidopsis thaliana OX... | [more] |
Q9SHZ8 | 4.0e-46 | 27.65 | Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... | [more] |
Q9LN01 | 1.7e-44 | 22.15 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
O23169 | 1.6e-42 | 23.52 | Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana OX... | [more] |
Q9FJY7 | 2.5e-40 | 24.14 | Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GGL5 | 6.6e-193 | 50.19 | pentatricopeptide repeat-containing protein At1g25360-like OS=Cucurbita moschata... | [more] |
A0A6J1CRF6 | 7.2e-192 | 49.69 | pentatricopeptide repeat-containing protein At1g25360-like OS=Momordica charanti... | [more] |
A0A6J1KSZ4 | 4.4e-189 | 49.69 | pentatricopeptide repeat-containing protein At1g25360-like OS=Cucurbita maxima O... | [more] |
A0A1S4DVG9 | 5.2e-182 | 50.27 | pentatricopeptide repeat-containing protein At1g25360-like OS=Cucumis melo OX=36... | [more] |
A0A5A7VDN1 | 1.2e-175 | 46.80 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT1G25360.1 | 5.6e-112 | 32.61 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G22070.1 | 2.8e-47 | 27.65 | pentatricopeptide (PPR) repeat-containing protein | [more] |
AT1G08070.1 | 1.2e-45 | 22.15 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G37170.1 | 1.1e-43 | 23.52 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G66520.1 | 1.8e-41 | 24.14 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |