HG10004768 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10004768
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Sec-independent protein translocase protein TATC
Location	Chr08: 20234814 .. 20235422 (-)
RNA-Seq Expression	HG10004768
Synteny	HG10004768

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCAGTCTTGATTCCATTTTATGCTGATCAATCTCGCAGTTTTAAACCCCAAAATTTCTCTCCGGCCACCGTCCACGGTGGTCTTCTCAACTTCCCTCCACCGGCTGTCCCATATTACAGTCACCGCCACCATCAGCAACCGCCACTCCTCCCTTTGCCCCGCCGTCCGTTTCCCCCTCCGGAAACCGGAGCCAGGGCATTCTGCCGCCCAAAGGGTATGAAATCCAGAGACCATTCTCTTACTCCAAAGAAATCAAAGCCAATTAAACGAAGTAAAGGGCCATCGGCGGTGAAATCGACGATGGAGTTCGTGATCGTTGATTCCACGAATCGACTGGGGCCGGAGCCGAGCCACGTTCCTAAAGATCTATGGAGAGTTTTAGGATTACGGTCATCGGCGCCGCCGTGCGAAGGTAACAAGAGTTCGGGGACGGCGGCGGAGATGGAGTTTTCGGGGTCGGCGTTCAGCGTTTCGCCGCCGCCGAGTAGTGTTCCGCTTCCGAAATTCTCTCTGAGGCGGAAGGTGGTTAGTTGTAACGTGGAGGCCGCCGGAGTAGACGCCGGAGCCACCGACAATCTCAGGCGACTTTTGCGCCTCCGATGA

mRNA sequence

ATGGAGGCAGTCTTGATTCCATTTTATGCTGATCAATCTCGCAGTTTTAAACCCCAAAATTTCTCTCCGGCCACCGTCCACGGTGGTCTTCTCAACTTCCCTCCACCGGCTGTCCCATATTACAGTCACCGCCACCATCAGCAACCGCCACTCCTCCCTTTGCCCCGCCGTCCGTTTCCCCCTCCGGAAACCGGAGCCAGGGCATTCTGCCGCCCAAAGGGTATGAAATCCAGAGACCATTCTCTTACTCCAAAGAAATCAAAGCCAATTAAACGAAGTAAAGGGCCATCGGCGGTGAAATCGACGATGGAGTTCGTGATCGTTGATTCCACGAATCGACTGGGGCCGGAGCCGAGCCACGTTCCTAAAGATCTATGGAGAGTTTTAGGATTACGGTCATCGGCGCCGCCGTGCGAAGGTAACAAGAGTTCGGGGACGGCGGCGGAGATGGAGTTTTCGGGGTCGGCGTTCAGCGTTTCGCCGCCGCCGAGTAGTGTTCCGCTTCCGAAATTCTCTCTGAGGCGGAAGGTGGTTAGTTGTAACGTGGAGGCCGCCGGAGTAGACGCCGGAGCCACCGACAATCTCAGGCGACTTTTGCGCCTCCGATGA

Coding sequence (CDS)

ATGGAGGCAGTCTTGATTCCATTTTATGCTGATCAATCTCGCAGTTTTAAACCCCAAAATTTCTCTCCGGCCACCGTCCACGGTGGTCTTCTCAACTTCCCTCCACCGGCTGTCCCATATTACAGTCACCGCCACCATCAGCAACCGCCACTCCTCCCTTTGCCCCGCCGTCCGTTTCCCCCTCCGGAAACCGGAGCCAGGGCATTCTGCCGCCCAAAGGGTATGAAATCCAGAGACCATTCTCTTACTCCAAAGAAATCAAAGCCAATTAAACGAAGTAAAGGGCCATCGGCGGTGAAATCGACGATGGAGTTCGTGATCGTTGATTCCACGAATCGACTGGGGCCGGAGCCGAGCCACGTTCCTAAAGATCTATGGAGAGTTTTAGGATTACGGTCATCGGCGCCGCCGTGCGAAGGTAACAAGAGTTCGGGGACGGCGGCGGAGATGGAGTTTTCGGGGTCGGCGTTCAGCGTTTCGCCGCCGCCGAGTAGTGTTCCGCTTCCGAAATTCTCTCTGAGGCGGAAGGTGGTTAGTTGTAACGTGGAGGCCGCCGGAGTAGACGCCGGAGCCACCGACAATCTCAGGCGACTTTTGCGCCTCCGATGA

Protein sequence

MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFPPPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVKSTMEFVIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLRLR

Homology

[Close]

BLAST of HG10004768 vs. NCBI nr
Match: XP_038884839.1 (uncharacterized protein LOC120075485 [Benincasa hispida])

HSP 1 Score: 358.6 bits (919), Expect = 3.5e-95
Identity = 182/203 (89.66%), Postives = 190/203 (93.60%), Query Frame = 0


Query: 1   MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFP 60
           MEAVL+PF   +SRSF PQNFSPATVHGGL NFPPPAV Y+SHRHHQQPPLLPLPRRPFP
Sbjct: 1   MEAVLVPF--SESRSFNPQNFSPATVHGGLFNFPPPAVTYFSHRHHQQPPLLPLPRRPFP 60

Query: 61  PPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSK-GPSAVKSTMEFVIVDSTNRLGPEPS 120
           PPETGA AFCRPK  KSRD SLTPKKSKPIKRSK GP AVKST+EFVIVDSTNRLGPEPS
Sbjct: 61  PPETGATAFCRPK-CKSRDQSLTPKKSKPIKRSKGGPPAVKSTVEFVIVDSTNRLGPEPS 120

Query: 121 HVPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVS 180
           HVPKDLW+VLGL+SSAPPCEG++S GTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVS
Sbjct: 121 HVPKDLWKVLGLQSSAPPCEGSRSLGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVS 180

Query: 181 CNVEAAGVDAGATDNLRRLLRLR 203
           CNVEAAGVDAGATDNLRRLLRLR
Sbjct: 181 CNVEAAGVDAGATDNLRRLLRLR 200

[Close]

BLAST of HG10004768 vs. NCBI nr
Match: XP_023546813.1 (proline-rich receptor-like protein kinase PERK2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321.2 bits (822), Expect = 6.2e-84
Identity = 166/202 (82.18%), Postives = 174/202 (86.14%), Query Frame = 0


Query: 1   MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFP 60
           MEAVLIPF A++SRS K  NFSPATVH GLLN PPPAVP YSHRHHQQPPLLPLPRRPFP
Sbjct: 1   MEAVLIPFSAERSRSLKSCNFSPATVHDGLLNVPPPAVPNYSHRHHQQPPLLPLPRRPFP 60

Query: 61  PPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVKSTMEFVIVDSTNRLGPEPSH 120
           P   GA   CRPKG KSRD SLTPKKSKPIKRS+GP A+KST EF+IVDSTNRLGPEPSH
Sbjct: 61  PTAVGAPPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALKSTAEFMIVDSTNRLGPEPSH 120

Query: 121 VPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSC 180
           VPKDLWRVLGLRSSAPP EG    G + E EFSGS F VSPPPSSVPLPKF+LRR+ VSC
Sbjct: 121 VPKDLWRVLGLRSSAPPREG----GRSFETEFSGSGFGVSPPPSSVPLPKFNLRRE-VSC 180

Query: 181 NVEAAGVDAGATDNLRRLLRLR 203
           NVEAAGVDAGATDNLRRLLRLR
Sbjct: 181 NVEAAGVDAGATDNLRRLLRLR 197

[Close]

BLAST of HG10004768 vs. NCBI nr
Match: XP_022997633.1 (uncharacterized protein LOC111492508 [Cucurbita maxima])

HSP 1 Score: 319.3 bits (817), Expect = 2.4e-83
Identity = 164/202 (81.19%), Postives = 174/202 (86.14%), Query Frame = 0


Query: 1   MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFP 60
           MEAVLIPF A++SRS K +NFSPATVH G+LN PPPAVP YSHRHHQQPPLLPLP RPFP
Sbjct: 1   MEAVLIPFSAERSRSLKSRNFSPATVHDGVLNIPPPAVPNYSHRHHQQPPLLPLPGRPFP 60

Query: 61  PPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVKSTMEFVIVDSTNRLGPEPSH 120
           P   G    CRPKG KSRD SLTPKKSKPIKRS+GP A+KST EF+IVDSTNRLGPEPSH
Sbjct: 61  PTAVGVPPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALKSTAEFMIVDSTNRLGPEPSH 120

Query: 121 VPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSC 180
           VPKDLWRVLGLRSSAPP EG    G + E EFSGSAF VSPPPSSVPLPKF+LRR+ VSC
Sbjct: 121 VPKDLWRVLGLRSSAPPREG----GRSFETEFSGSAFGVSPPPSSVPLPKFTLRRE-VSC 180

Query: 181 NVEAAGVDAGATDNLRRLLRLR 203
           NVEAAGVDAGATDNLRRLLRLR
Sbjct: 181 NVEAAGVDAGATDNLRRLLRLR 197

[Close]

BLAST of HG10004768 vs. NCBI nr
Match: KAA0064835.1 (sec-independent protein translocase protein TATC [Cucumis melo var. makuwa])

HSP 1 Score: 313.9 bits (803), Expect = 9.9e-82
Identity = 159/202 (78.71%), Postives = 168/202 (83.17%), Query Frame = 0


Query: 1   MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFP 60
           ME VLIPF ADQSRSF PQN SPATVH GLLNFP   +PY   RHHQQPPLLPLPRRP P
Sbjct: 1   MEVVLIPFSADQSRSFNPQNLSPATVHAGLLNFPLRGIPYNGRRHHQQPPLLPLPRRPLP 60

Query: 61  PPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVKSTMEFVIVDSTNRLGPEPSH 120
           P ETGA +F R K +K RD SL PKKSKPIKRS+GP A KST+E VI+DSTNRLGPEP H
Sbjct: 61  PSETGATSFFRQKCVKFRDQSLNPKKSKPIKRSRGPPAAKSTVELVIIDSTNRLGPEPCH 120

Query: 121 VPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSC 180
           VPKDLWRVLGLR SAP C+  +S  TAAE+EFSGSA S SPPPSSVPLPKFSLRRKVV C
Sbjct: 121 VPKDLWRVLGLRPSAPMCKSTRSWETAAEIEFSGSACSQSPPPSSVPLPKFSLRRKVVGC 180

Query: 181 NVEAAGVDAGATDNLRRLLRLR 203
           NVE AGVDAGATDNLRRLLRLR
Sbjct: 181 NVEGAGVDAGATDNLRRLLRLR 202

[Close]

BLAST of HG10004768 vs. NCBI nr
Match: XP_022962625.1 (uncharacterized protein LOC111463019 [Cucurbita moschata])

HSP 1 Score: 311.2 bits (796), Expect = 6.4e-81
Identity = 162/202 (80.20%), Postives = 171/202 (84.65%), Query Frame = 0


Query: 1   MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFP 60
           ME VLIPF A++SRS K +NF PATVH GLLN PPPAVP YSHR  QQPPLLPLPRRPFP
Sbjct: 1   MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHRLRQQPPLLPLPRRPFP 60

Query: 61  PPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVKSTMEFVIVDSTNRLGPEPSH 120
           P   GA   CRPKG KSRD SLTPKKSKPIKRS+GP A+KST EF+IVDSTNRLGPEPSH
Sbjct: 61  PTAVGAPPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALKSTAEFMIVDSTNRLGPEPSH 120

Query: 121 VPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSC 180
           VPKDLWRVLGLRSSAPP EG    G   E EFSGSAF VSPPPSSVPLPKF+LRR+ +SC
Sbjct: 121 VPKDLWRVLGLRSSAPPREG----GRRFETEFSGSAFGVSPPPSSVPLPKFTLRRE-MSC 180

Query: 181 NVEAAGVDAGATDNLRRLLRLR 203
           NVEAAGVDAGATDNLRRLLRLR
Sbjct: 181 NVEAAGVDAGATDNLRRLLRLR 197

[Close]

BLAST of HG10004768 vs. ExPASy TrEMBL
Match: A0A6J1KEH8 (uncharacterized protein LOC111492508 OS=Cucurbita maxima OX=3661 GN=LOC111492508 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.1e-83
Identity = 164/202 (81.19%), Postives = 174/202 (86.14%), Query Frame = 0


Query: 1   MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFP 60
           MEAVLIPF A++SRS K +NFSPATVH G+LN PPPAVP YSHRHHQQPPLLPLP RPFP
Sbjct: 1   MEAVLIPFSAERSRSLKSRNFSPATVHDGVLNIPPPAVPNYSHRHHQQPPLLPLPGRPFP 60

Query: 61  PPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVKSTMEFVIVDSTNRLGPEPSH 120
           P   G    CRPKG KSRD SLTPKKSKPIKRS+GP A+KST EF+IVDSTNRLGPEPSH
Sbjct: 61  PTAVGVPPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALKSTAEFMIVDSTNRLGPEPSH 120

Query: 121 VPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSC 180
           VPKDLWRVLGLRSSAPP EG    G + E EFSGSAF VSPPPSSVPLPKF+LRR+ VSC
Sbjct: 121 VPKDLWRVLGLRSSAPPREG----GRSFETEFSGSAFGVSPPPSSVPLPKFTLRRE-VSC 180

Query: 181 NVEAAGVDAGATDNLRRLLRLR 203
           NVEAAGVDAGATDNLRRLLRLR
Sbjct: 181 NVEAAGVDAGATDNLRRLLRLR 197

[Close]

BLAST of HG10004768 vs. ExPASy TrEMBL
Match: A0A5A7VG22 (Sec-independent protein translocase protein TATC OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001470 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.8e-82
Identity = 159/202 (78.71%), Postives = 168/202 (83.17%), Query Frame = 0


Query: 1   MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFP 60
           ME VLIPF ADQSRSF PQN SPATVH GLLNFP   +PY   RHHQQPPLLPLPRRP P
Sbjct: 1   MEVVLIPFSADQSRSFNPQNLSPATVHAGLLNFPLRGIPYNGRRHHQQPPLLPLPRRPLP 60

Query: 61  PPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVKSTMEFVIVDSTNRLGPEPSH 120
           P ETGA +F R K +K RD SL PKKSKPIKRS+GP A KST+E VI+DSTNRLGPEP H
Sbjct: 61  PSETGATSFFRQKCVKFRDQSLNPKKSKPIKRSRGPPAAKSTVELVIIDSTNRLGPEPCH 120

Query: 121 VPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSC 180
           VPKDLWRVLGLR SAP C+  +S  TAAE+EFSGSA S SPPPSSVPLPKFSLRRKVV C
Sbjct: 121 VPKDLWRVLGLRPSAPMCKSTRSWETAAEIEFSGSACSQSPPPSSVPLPKFSLRRKVVGC 180

Query: 181 NVEAAGVDAGATDNLRRLLRLR 203
           NVE AGVDAGATDNLRRLLRLR
Sbjct: 181 NVEGAGVDAGATDNLRRLLRLR 202

[Close]

BLAST of HG10004768 vs. ExPASy TrEMBL
Match: A0A6J1HFM4 (uncharacterized protein LOC111463019 OS=Cucurbita moschata OX=3662 GN=LOC111463019 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 3.1e-81
Identity = 162/202 (80.20%), Postives = 171/202 (84.65%), Query Frame = 0


Query: 1   MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFP 60
           ME VLIPF A++SRS K +NF PATVH GLLN PPPAVP YSHR  QQPPLLPLPRRPFP
Sbjct: 1   MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHRLRQQPPLLPLPRRPFP 60

Query: 61  PPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVKSTMEFVIVDSTNRLGPEPSH 120
           P   GA   CRPKG KSRD SLTPKKSKPIKRS+GP A+KST EF+IVDSTNRLGPEPSH
Sbjct: 61  PTAVGAPPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALKSTAEFMIVDSTNRLGPEPSH 120

Query: 121 VPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSC 180
           VPKDLWRVLGLRSSAPP EG    G   E EFSGSAF VSPPPSSVPLPKF+LRR+ +SC
Sbjct: 121 VPKDLWRVLGLRSSAPPREG----GRRFETEFSGSAFGVSPPPSSVPLPKFTLRRE-MSC 180

Query: 181 NVEAAGVDAGATDNLRRLLRLR 203
           NVEAAGVDAGATDNLRRLLRLR
Sbjct: 181 NVEAAGVDAGATDNLRRLLRLR 197

[Close]

BLAST of HG10004768 vs. ExPASy TrEMBL
Match: A0A0A0LN70 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345930 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.8e-79
Identity = 155/202 (76.73%), Postives = 165/202 (81.68%), Query Frame = 0


Query: 1   MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFP 60
           ME V IPF ADQSR F PQNFSPA VHGG LNFP P + Y S R HQQPPLLPLPRRP P
Sbjct: 1   MEVVFIPFSADQSRGFNPQNFSPANVHGGFLNFPLPGISYNSCRQHQQPPLLPLPRRPLP 60

Query: 61  PPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVKSTMEFVIVDSTNRLGPEPSH 120
           P E GA    RPK M+ RD SLTPKKSKPIKRS+GP A KST+E VIVDSTNRLGPEPSH
Sbjct: 61  PSEIGATVSSRPKCMEFRDQSLTPKKSKPIKRSRGPPAAKSTVELVIVDSTNRLGPEPSH 120

Query: 121 VPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSC 180
           VPKDL  +LGLR S P CE  +S  TAAE+EFSGSA+S SPPPSSVPLPKFSLRRKVV C
Sbjct: 121 VPKDLLTLLGLRPSVPLCESTRSWETAAEIEFSGSAYSQSPPPSSVPLPKFSLRRKVVGC 180

Query: 181 NVEAAGVDAGATDNLRRLLRLR 203
           NVEA+GVDAGATDNLRRLLR+R
Sbjct: 181 NVEASGVDAGATDNLRRLLRIR 202

[Close]

BLAST of HG10004768 vs. ExPASy TrEMBL
Match: A0A6J1GI76 (uncharacterized protein LOC111454434 OS=Cucurbita moschata OX=3662 GN=LOC111454434 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 4.0e-52
Identity = 129/208 (62.02%), Postives = 146/208 (70.19%), Query Frame = 0


Query: 1   MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSH--RHHQQPPLLPLPRRP 60
           MEAVLI           P NFSPA           PAV +YSH  RH +QPP  PLPRR 
Sbjct: 1   MEAVLI-----------PHNFSPAA----------PAVTFYSHRRRHRRQPPRFPLPRRS 60

Query: 61  FPPPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVKSTMEFVIVDSTNRLGPEP 120
           FPP    A+  CRPKG++ RD SL PKKSK IKR +    V+ T E +IVDSTNR+GPEP
Sbjct: 61  FPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCR-ELPVEMTAEALIVDSTNRMGPEP 120

Query: 121 SHVPKDLWRVLGLR---SSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRR 180
           SHVPKDL  VLGLR    S+PP EG++S G AAE+EFSGSAF+VSPPPSSVPLP F L R
Sbjct: 121 SHVPKDLCVVLGLRLPPPSSPPREGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMR 180

Query: 181 KVVSCNVE-AAGVDAGATDNLRRLLRLR 203
           K ++CNVE AAG+DAGATDNLRRLLRLR
Sbjct: 181 K-LNCNVEAAAGIDAGATDNLRRLLRLR 185

[Close]

BLAST of HG10004768 vs. TAIR 10
Match: AT1G20070.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; Has 26 Blast hits to 26 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 5.9e-08
Identity = 26/44 (59.09%), Postives = 37/44 (84.09%), Query Frame = 0


Query: 159 VSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLRLR 203
           +SPPPSS+P+P+FS++ K + CNVEAAG    AT+N+RR+L+LR
Sbjct: 151 LSPPPSSLPMPRFSIKPK-LRCNVEAAGKSDVATNNIRRVLQLR 193

[Close]

BLAST of HG10004768 vs. TAIR 10
Match: AT3G21570.1 (unknown protein; Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 6.1e-05
Identity = 25/57 (43.86%), Postives = 35/57 (61.40%), Query Frame = 0


Query: 146 TAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLRLR 203
           +A ++    S F+VSP PSS+PLP FS  +K     V    +D  A+ +LRRLLRL+
Sbjct: 81  SADDIYAGSSIFAVSPAPSSLPLPSFS--KKKAKSQVVVVSIDDSASQDLRRLLRLK 135

[Close]

BLAST of HG10004768 vs. TAIR 10
Match: AT4G02040.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 30 Blast hits to 30 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 6.8e-04
Identity = 26/66 (39.39%), Postives = 36/66 (54.55%), Query Frame = 0


Query: 106 VIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSS 165
           +IV +TNR+GPEP  + K +   LGL+S                  F+G+  S+SPPPS 
Sbjct: 97  LIVSATNRIGPEPEILMKQI-GALGLQS------------------FAGANCSLSPPPSC 143

Query: 166 VPLPKF 172
           VP+P F
Sbjct: 157 VPIPCF 143

The following BLAST results are available for this feature:

BLAST of HG10004768 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884839.1	3.5e-95	89.66	uncharacterized protein LOC120075485 [Benincasa hispida]	[more]
XP_023546813.1	6.2e-84	82.18	proline-rich receptor-like protein kinase PERK2 [Cucurbita pepo subsp. pepo]	[more]
XP_022997633.1	2.4e-83	81.19	uncharacterized protein LOC111492508 [Cucurbita maxima]	[more]
KAA0064835.1	9.9e-82	78.71	sec-independent protein translocase protein TATC [Cucumis melo var. makuwa]	[more]
XP_022962625.1	6.4e-81	80.20	uncharacterized protein LOC111463019 [Cucurbita moschata]	[more]

BLAST of HG10004768 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10004768 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KEH8	1.1e-83	81.19	uncharacterized protein LOC111492508 OS=Cucurbita maxima OX=3661 GN=LOC111492508...	[more]
A0A5A7VG22	4.8e-82	78.71	Sec-independent protein translocase protein TATC OS=Cucumis melo var. makuwa OX=...	[more]
A0A6J1HFM4	3.1e-81	80.20	uncharacterized protein LOC111463019 OS=Cucurbita moschata OX=3662 GN=LOC1114630...	[more]
A0A0A0LN70	3.8e-79	76.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345930 PE=4 SV=1	[more]
A0A6J1GI76	4.0e-52	62.02	uncharacterized protein LOC111454434 OS=Cucurbita moschata OX=3662 GN=LOC1114544...	[more]

BLAST of HG10004768 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G20070.1	5.9e-08	59.09	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G21570.1	6.1e-05	43.86	unknown protein; Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bac...	[more]
AT4G02040.1	6.8e-04	39.39	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF15365	PNRC	coord: 152..171 e-value: 6.8E-5 score: 22.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..86
None	No IPR available	PANTHER	PTHR33670	SPLICING FACTOR, PROLINE- AND GLUTAMINE-RICH-LIKE	coord: 30..202
None	No IPR available	PANTHER	PTHR33670:SF14	SPLICING FACTOR, PROLINE- AND GLUTAMINE-RICH-LIKE	coord: 30..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10004768.1	HG10004768.1	mRNA