HG10004763 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10004763
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Thioredoxin-like_fold domain-containing protein
Location	Chr08: 20208477 .. 20210835 (-)
RNA-Seq Expression	HG10004763
Synteny	HG10004763

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAAACCAAAAACCAGTTGCTCACCGCTTCAATCACTTGCTTTTTCCTTCTCCTTCCTCGCCGTCTTTCTTCTCAATGCGCATGCTCAGAGTCTCCCACCAGCAAAATTCGACGGTTTCGTATATGGAAATCACTCACTGGACTTAGATACGATCCTCATCGAGGCGTTTTTCGATCCGGTTTGTCCCGATAGCAGAGACTCTTGGCCACCTCTCAAAAAAGCCCTCGATCATTACGGCTCTCGCGTTCGTCTTGTCATTCACCTCCTCCCTCTACCGTGAGTACACTCGATTGCTCTCTTATGTGTGTCTGCGTATGATTTTCGTTGATTGCTCTGTTTTATAGCTGAGATTTTTTTTTATTCGAGTTTCGAAATTTAAAAATGGATGATCGTCATACGTTTCGAGGATCGTCTCAATCGGAAGGGTTGATACTTAATTGGAAGTAATTGTAATGCCTTCACTTTGTCACTTTACTAAAATTCGGTTGTTTGTGTTGGATTTCTTTGAAGAGACAGAGACAGAAATTATATTAAATTTGCGTAGGAGTAGTGTTTTCGGGTTGCAATTGTAATTAATTAAATAAAATTGCCCTGAGGTGATTCTGATTTCGATTATGCATGTTAACAATTCAGTACGAACTTTGCCTACGTTCTGGATTGATTTAAACTTAATGTTATCCTTCGTCGCGGATTCATGGGCGAGAATTTTCTGATAGTTCATATTTTGTTGGATTGCAGTTATCATGACAATGCATATGCAGCATCTCGTGCTTTACATATTGTAGATTTGGTGAATCCCTCGGATACATTCAAATTGTTGGAAGCATTCTTCGGGCATCAGGTTATTGTTTTGTTCAATTTATTAAATACATATATTTTGAATGTAGGGAACCATTGATCTGGTGATGTATAAATGAGAATGAATGTGTCTTCGTATTAGAATTATCGAGAGAGGAGAAGACAGAGTTTTAACACAAGGGGATGAGATTTTATTCAATAATATGTCCAAAAGGGAGAGTGGTATGTATGGAGTACCAACTGCTGAATATGAGAATAATAACCAGACGAACAACTTTAACAAACTACAATAATTCGTAACTAATCACTTAATAATATGGCTGAAAGTCATTTGATTAATGATTTTCCTTAATTGTACGAGATTAGGTTTTCAATCACTTCTGTCCAAGTTCTTTCTTTAGAGCTTACGTTTTCTGGAAATTATCAAGTAAATGGTACTTTCCTGCTGTATATATTTTTCCTGGGTTTCATTTTCGAAAATCTCAGTAGCATATAGACTTGTTTGGTGGAATGTTTTAGAGCTTTTGTGTATTTAAAACTGTTGGACCTGTAACTTTCCTGCTGTATATATTTTTCCAGCTGGGTTTCATTTTGGAAAATTTCAGTAGCATATAGGCTTTTTTGGTGGAATGTTTTAGAGCTTTTGTGTATTCAAAACTGTTGGACTTGTAATGCAGGGTCATCCTCTTATAGGAAGAATAACTTCCATTGTTTTGAAATATACCTGGTCCATGGTTTAAACAAAATAAAGAAAAATCACATAAAATGGTTTAAAAAACAGTAACCCTCCAATGGTGTTTTCATTGATTTCTGTTTTCAAAAGCAGAAAATTGTTTTAAAAAAACTCTCAAACAACTCGTCGATCATGCTTTCACTGAAATTGGACTTATTTGTTGTGTCATTAGTAGTGAAAGGTTTCTGAATGCTATATGTTGAATTGAACGCATGAACCTCAAAATGACTAGACAAATTTTGTATTTTATGTAGTCTCACTCTCACTATCATAAAGACTAAATGACTGCATTTCTAATAAACAGAAGCAGTTTTACAATGCCGAAACTCGTTATTTGTCAAGGGCTTCTGTTGTGGATAACATTGTGAAGTTTGGAGTTGAAGTACTGGGGAACTCCTACAAAAACACTCTAGTAACTGGCTTCAATGACAGGGACACCGATCTTTTGACACGTGTTTCTTTCAAGGTATGATGGCATCACACTTCAATTTTTACGTTGTTATAAAGATATATATAGTTATATTATAACAGATAAGTAATGCAATAACATTGTGAGATTGTTAATTGATCTCGCTGCATGATATCTGAGCCTAATCTACATTTCACAACTTTGTTTTCTTTGCTATGCGTCATTCATTTTGAACTCTTTTACATCTTGCAGTTTAGCACCTCAAGAGGAGTCTATGGAACACCTTTTTTCTTTATAAATGGATTCCTAGCTCCTGATAAAGGATCTCCCATAAATTACACTGGATGGAGAAACTTGATCGACCCTTTGATCAAGAAAAATAAGAGATCAGGGTCTCAGCATCTATTGCTGTAA

mRNA sequence

ATGGTGAAACCAAAAACCAGTTGCTCACCGCTTCAATCACTTGCTTTTTCCTTCTCCTTCCTCGCCGTCTTTCTTCTCAATGCGCATGCTCAGAGTCTCCCACCAGCAAAATTCGACGGTTTCGTATATGGAAATCACTCACTGGACTTAGATACGATCCTCATCGAGGCGTTTTTCGATCCGGTTTGTCCCGATAGCAGAGACTCTTGGCCACCTCTCAAAAAAGCCCTCGATCATTACGGCTCTCGCGTTCGTCTTGTCATTCACCTCCTCCCTCTACCTTATCATGACAATGCATATGCAGCATCTCGTGCTTTACATATTGTAGATTTGGTGAATCCCTCGGATACATTCAAATTGTTGGAAGCATTCTTCGGGCATCAGAAGCAGTTTTACAATGCCGAAACTCGTTATTTGTCAAGGGCTTCTGTTGTGGATAACATTGTGAAGTTTGGAGTTGAAGTACTGGGGAACTCCTACAAAAACACTCTAGTAACTGGCTTCAATGACAGGGACACCGATCTTTTGACACGTGTTTCTTTCAAGTTTAGCACCTCAAGAGGAGTCTATGGAACACCTTTTTTCTTTATAAATGGATTCCTAGCTCCTGATAAAGGATCTCCCATAAATTACACTGGATGGAGAAACTTGATCGACCCTTTGATCAAGAAAAATAAGAGATCAGGGTCTCAGCATCTATTGCTGTAA

Coding sequence (CDS)

ATGGTGAAACCAAAAACCAGTTGCTCACCGCTTCAATCACTTGCTTTTTCCTTCTCCTTCCTCGCCGTCTTTCTTCTCAATGCGCATGCTCAGAGTCTCCCACCAGCAAAATTCGACGGTTTCGTATATGGAAATCACTCACTGGACTTAGATACGATCCTCATCGAGGCGTTTTTCGATCCGGTTTGTCCCGATAGCAGAGACTCTTGGCCACCTCTCAAAAAAGCCCTCGATCATTACGGCTCTCGCGTTCGTCTTGTCATTCACCTCCTCCCTCTACCTTATCATGACAATGCATATGCAGCATCTCGTGCTTTACATATTGTAGATTTGGTGAATCCCTCGGATACATTCAAATTGTTGGAAGCATTCTTCGGGCATCAGAAGCAGTTTTACAATGCCGAAACTCGTTATTTGTCAAGGGCTTCTGTTGTGGATAACATTGTGAAGTTTGGAGTTGAAGTACTGGGGAACTCCTACAAAAACACTCTAGTAACTGGCTTCAATGACAGGGACACCGATCTTTTGACACGTGTTTCTTTCAAGTTTAGCACCTCAAGAGGAGTCTATGGAACACCTTTTTTCTTTATAAATGGATTCCTAGCTCCTGATAAAGGATCTCCCATAAATTACACTGGATGGAGAAACTTGATCGACCCTTTGATCAAGAAAAATAAGAGATCAGGGTCTCAGCATCTATTGCTGTAA

Protein sequence

MVKPKTSCSPLQSLAFSFSFLAVFLLNAHAQSLPPAKFDGFVYGNHSLDLDTILIEAFFDPVCPDSRDSWPPLKKALDHYGSRVRLVIHLLPLPYHDNAYAASRALHIVDLVNPSDTFKLLEAFFGHQKQFYNAETRYLSRASVVDNIVKFGVEVLGNSYKNTLVTGFNDRDTDLLTRVSFKFSTSRGVYGTPFFFINGFLAPDKGSPINYTGWRNLIDPLIKKNKRSGSQHLLL

Homology

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BLAST of HG10004763 vs. NCBI nr
Match: XP_038886167.1 (uncharacterized protein LOC120076418 [Benincasa hispida])

HSP 1 Score: 473.4 bits (1217), Expect = 1.1e-129
Identity = 230/235 (97.87%), Postives = 231/235 (98.30%), Query Frame = 0


Query: 1   MVKPKTSCSPLQSLAFSFSFLAVFLLNAHAQSLPPAKFDGFVYGNHSLDLDTILIEAFFD 60
           M KPKTS SPL SLAFSFSFLAVFLLNAHAQSLPPAKFDGFVYGNHSLDLDTILIEAFFD
Sbjct: 1   MEKPKTSRSPLPSLAFSFSFLAVFLLNAHAQSLPPAKFDGFVYGNHSLDLDTILIEAFFD 60

Query: 61  PVCPDSRDSWPPLKKALDHYGSRVRLVIHLLPLPYHDNAYAASRALHIVDLVNPSDTFKL 120
           PVCPDSRDSWPPLKKALDHYGSRVRLVIHLLPLPYHDNAYAASRALHIVDLVNPSDTFKL
Sbjct: 61  PVCPDSRDSWPPLKKALDHYGSRVRLVIHLLPLPYHDNAYAASRALHIVDLVNPSDTFKL 120

Query: 121 LEAFFGHQKQFYNAETRYLSRASVVDNIVKFGVEVLGNSYKNTLVTGFNDRDTDLLTRVS 180
           LEAFFGHQKQFYNAETRYLSRASVVDNIVKFGVEVLGNSYKNTL+TGFNDRDTDLLTRVS
Sbjct: 121 LEAFFGHQKQFYNAETRYLSRASVVDNIVKFGVEVLGNSYKNTLITGFNDRDTDLLTRVS 180

Query: 181 FKFSTSRGVYGTPFFFINGFLAPDKGSPINYTGWRNLIDPLIKKNKRSGSQHLLL 236
           FKFSTSRGVYGTPFFFINGFLAPDKGSPINYTGWRNLIDPLIKKNKRSGSQHL L
Sbjct: 181 FKFSTSRGVYGTPFFFINGFLAPDKGSPINYTGWRNLIDPLIKKNKRSGSQHLSL 235

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BLAST of HG10004763 vs. NCBI nr
Match: KAA0064840.1 (Thioredoxin-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 441.0 bits (1133), Expect = 6.3e-120
Identity = 216/238 (90.76%), Postives = 224/238 (94.12%), Query Frame = 0


Query: 1   MVKPKTSCSPLQSL---AFSFSFLAVFLLNAHAQSLPPAKFDGFVYGNHSLDLDTILIEA 60
           M KP T CS LQSL   +FSFSFLA FLL AHAQSLPPAKFDGFVYGNHSLDL+TILIEA
Sbjct: 1   MEKPNTICSHLQSLLAFSFSFSFLAHFLLTAHAQSLPPAKFDGFVYGNHSLDLNTILIEA 60

Query: 61  FFDPVCPDSRDSWPPLKKALDHYGSRVRLVIHLLPLPYHDNAYAASRALHIVDLVNPSDT 120
           FFDPVCPDSRDSWPPLKKALDHYGSRVRLVIHLLPLPYHDNAYA SRALHIVDLVNPSDT
Sbjct: 61  FFDPVCPDSRDSWPPLKKALDHYGSRVRLVIHLLPLPYHDNAYATSRALHIVDLVNPSDT 120

Query: 121 FKLLEAFFGHQKQFYNAETRYLSRASVVDNIVKFGVEVLGNSYKNTLVTGFNDRDTDLLT 180
           FKLLEAFFG QKQFYNAETRYLSRA+V+DNIVKFGVEVLG+SYKNTLVTGF+DR+TDLLT
Sbjct: 121 FKLLEAFFGDQKQFYNAETRYLSRAAVMDNIVKFGVEVLGDSYKNTLVTGFSDRETDLLT 180

Query: 181 RVSFKFSTSRGVYGTPFFFINGFLAPDKGSPINYTGWRNLIDPLIKKNKRSGSQHLLL 236
           RVSFKFSTSRGVYGTPFFFINGFLAPDKGSP+NY  WRNLIDPLIKKNKRSGSQHL L
Sbjct: 181 RVSFKFSTSRGVYGTPFFFINGFLAPDKGSPLNYAEWRNLIDPLIKKNKRSGSQHLSL 238

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BLAST of HG10004763 vs. NCBI nr
Match: XP_008445330.1 (PREDICTED: uncharacterized protein LOC103488395 [Cucumis melo])

HSP 1 Score: 437.2 bits (1123), Expect = 9.0e-119
Identity = 214/238 (89.92%), Postives = 223/238 (93.70%), Query Frame = 0


Query: 1   MVKPKTSCSPLQSL---AFSFSFLAVFLLNAHAQSLPPAKFDGFVYGNHSLDLDTILIEA 60
           M KP T CS LQSL   +F FSFLA FLL AHAQSLPPAKFDGFVYGNHSLDL+TILIEA
Sbjct: 1   MEKPNTICSHLQSLLTFSFFFSFLAHFLLTAHAQSLPPAKFDGFVYGNHSLDLNTILIEA 60

Query: 61  FFDPVCPDSRDSWPPLKKALDHYGSRVRLVIHLLPLPYHDNAYAASRALHIVDLVNPSDT 120
           FFDPVCPDSRDSWPPLKKALDHYGSRVRLVIHLLPLPYH+NAYA SRALHIVDLVNPSDT
Sbjct: 61  FFDPVCPDSRDSWPPLKKALDHYGSRVRLVIHLLPLPYHENAYATSRALHIVDLVNPSDT 120

Query: 121 FKLLEAFFGHQKQFYNAETRYLSRASVVDNIVKFGVEVLGNSYKNTLVTGFNDRDTDLLT 180
           FKLLEAFFG QKQFYNAETRYLSRA+V+DNIVKFGVEVLG+SYKNTLVTGF+DR+TDLLT
Sbjct: 121 FKLLEAFFGDQKQFYNAETRYLSRAAVMDNIVKFGVEVLGDSYKNTLVTGFSDRETDLLT 180

Query: 181 RVSFKFSTSRGVYGTPFFFINGFLAPDKGSPINYTGWRNLIDPLIKKNKRSGSQHLLL 236
           RVSFKFSTSRGVYGTPFFFINGFLAPDKGSP+NY  WRNLIDPLIKKNKRSGSQHL L
Sbjct: 181 RVSFKFSTSRGVYGTPFFFINGFLAPDKGSPLNYAEWRNLIDPLIKKNKRSGSQHLSL 238

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BLAST of HG10004763 vs. NCBI nr
Match: XP_004143004.1 (uncharacterized protein LOC101216804 [Cucumis sativus] >KGN62258.1 hypothetical protein Csa_018779 [Cucumis sativus])

HSP 1 Score: 431.4 bits (1108), Expect = 5.0e-117
Identity = 211/236 (89.41%), Postives = 222/236 (94.07%), Query Frame = 0


Query: 1   MVKPKTSCSPLQS-LAFSFSFLAVFLLNAHAQSLPPAKFDGFVYGNHSLDLDTILIEAFF 60
           M K  ++ S LQS LAFSFSFLA+F L AHAQSLPP KFDGFVYGNHSLD +TI IEAFF
Sbjct: 1   MEKTNSTSSHLQSLLAFSFSFLALFHLTAHAQSLPPPKFDGFVYGNHSLDFNTIHIEAFF 60

Query: 61  DPVCPDSRDSWPPLKKALDHYGSRVRLVIHLLPLPYHDNAYAASRALHIVDLVNPSDTFK 120
           DPVCPDSRDSWPPLKKALDHYGSRVRLVIHLLPLPYHDNAYAASRALHIVDLVNPSDTFK
Sbjct: 61  DPVCPDSRDSWPPLKKALDHYGSRVRLVIHLLPLPYHDNAYAASRALHIVDLVNPSDTFK 120

Query: 121 LLEAFFGHQKQFYNAETRYLSRASVVDNIVKFGVEVLGNSYKNTLVTGFNDRDTDLLTRV 180
           LLEAFFG QKQFYNAETRYLSRA++VD++VKFGVEVLG+SYKNTLVTGFNDR+TDLLTRV
Sbjct: 121 LLEAFFGDQKQFYNAETRYLSRAAIVDSMVKFGVEVLGDSYKNTLVTGFNDRETDLLTRV 180

Query: 181 SFKFSTSRGVYGTPFFFINGFLAPDKGSPINYTGWRNLIDPLIKKNKRSGSQHLLL 236
           SFKFSTSRGVYGTPFFFINGFLAPDKGSP+NYT WRNLIDPLIKKNKRSGSQHL L
Sbjct: 181 SFKFSTSRGVYGTPFFFINGFLAPDKGSPLNYTEWRNLIDPLIKKNKRSGSQHLSL 236

[Close]

BLAST of HG10004763 vs. NCBI nr
Match: KAG7020442.1 (hypothetical protein SDJN02_17126 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 422.2 bits (1084), Expect = 3.0e-114
Identity = 205/235 (87.23%), Postives = 215/235 (91.49%), Query Frame = 0


Query: 1   MVKPKTSCSPLQSLAFSFSFLAVFLLNAHAQSLPPAKFDGFVYGNHSLDLDTILIEAFFD 60
           M KPK+SCS LQS+A SF F  +F LNAHAQSLPPAKFDGFVYGNHS +L+TI IEAF+D
Sbjct: 1   MEKPKSSCSTLQSIAVSFFFFFLFHLNAHAQSLPPAKFDGFVYGNHSGELNTIRIEAFYD 60

Query: 61  PVCPDSRDSWPPLKKALDHYGSRVRLVIHLLPLPYHDNAYAASRALHIVDLVNPSDTFKL 120
           PVCPDSRDSWPPLKKALD+YGSRV LVIHLLPLPYHDNAYAASRALHIVDLVNPS TF L
Sbjct: 61  PVCPDSRDSWPPLKKALDYYGSRVHLVIHLLPLPYHDNAYAASRALHIVDLVNPSATFTL 120

Query: 121 LEAFFGHQKQFYNAETRYLSRASVVDNIVKFGVEVLGNSYKNTLVTGFNDRDTDLLTRVS 180
           LEAFFG QKQFYNAETRYLSRASVVDNIVKFGV+VLG SYKN LV GFNDRDTDLLTRVS
Sbjct: 121 LEAFFGQQKQFYNAETRYLSRASVVDNIVKFGVKVLGESYKNALVAGFNDRDTDLLTRVS 180

Query: 181 FKFSTSRGVYGTPFFFINGFLAPDKGSPINYTGWRNLIDPLIKKNKRSGSQHLLL 236
           FKFSTSRGVYGTPFFFINGFLAPD+GSP+NYTGWR LIDPLIKK KRS SQHL L
Sbjct: 181 FKFSTSRGVYGTPFFFINGFLAPDQGSPLNYTGWRKLIDPLIKKKKRSWSQHLSL 235

[Close]

BLAST of HG10004763 vs. ExPASy TrEMBL
Match: A0A5A7VCC7 (Thioredoxin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001520 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 3.0e-120
Identity = 216/238 (90.76%), Postives = 224/238 (94.12%), Query Frame = 0


Query: 1   MVKPKTSCSPLQSL---AFSFSFLAVFLLNAHAQSLPPAKFDGFVYGNHSLDLDTILIEA 60
           M KP T CS LQSL   +FSFSFLA FLL AHAQSLPPAKFDGFVYGNHSLDL+TILIEA
Sbjct: 1   MEKPNTICSHLQSLLAFSFSFSFLAHFLLTAHAQSLPPAKFDGFVYGNHSLDLNTILIEA 60

Query: 61  FFDPVCPDSRDSWPPLKKALDHYGSRVRLVIHLLPLPYHDNAYAASRALHIVDLVNPSDT 120
           FFDPVCPDSRDSWPPLKKALDHYGSRVRLVIHLLPLPYHDNAYA SRALHIVDLVNPSDT
Sbjct: 61  FFDPVCPDSRDSWPPLKKALDHYGSRVRLVIHLLPLPYHDNAYATSRALHIVDLVNPSDT 120

Query: 121 FKLLEAFFGHQKQFYNAETRYLSRASVVDNIVKFGVEVLGNSYKNTLVTGFNDRDTDLLT 180
           FKLLEAFFG QKQFYNAETRYLSRA+V+DNIVKFGVEVLG+SYKNTLVTGF+DR+TDLLT
Sbjct: 121 FKLLEAFFGDQKQFYNAETRYLSRAAVMDNIVKFGVEVLGDSYKNTLVTGFSDRETDLLT 180

Query: 181 RVSFKFSTSRGVYGTPFFFINGFLAPDKGSPINYTGWRNLIDPLIKKNKRSGSQHLLL 236
           RVSFKFSTSRGVYGTPFFFINGFLAPDKGSP+NY  WRNLIDPLIKKNKRSGSQHL L
Sbjct: 181 RVSFKFSTSRGVYGTPFFFINGFLAPDKGSPLNYAEWRNLIDPLIKKNKRSGSQHLSL 238

[Close]

BLAST of HG10004763 vs. ExPASy TrEMBL
Match: A0A1S3BD67 (uncharacterized protein LOC103488395 OS=Cucumis melo OX=3656 GN=LOC103488395 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 4.4e-119
Identity = 214/238 (89.92%), Postives = 223/238 (93.70%), Query Frame = 0


Query: 1   MVKPKTSCSPLQSL---AFSFSFLAVFLLNAHAQSLPPAKFDGFVYGNHSLDLDTILIEA 60
           M KP T CS LQSL   +F FSFLA FLL AHAQSLPPAKFDGFVYGNHSLDL+TILIEA
Sbjct: 1   MEKPNTICSHLQSLLTFSFFFSFLAHFLLTAHAQSLPPAKFDGFVYGNHSLDLNTILIEA 60

Query: 61  FFDPVCPDSRDSWPPLKKALDHYGSRVRLVIHLLPLPYHDNAYAASRALHIVDLVNPSDT 120
           FFDPVCPDSRDSWPPLKKALDHYGSRVRLVIHLLPLPYH+NAYA SRALHIVDLVNPSDT
Sbjct: 61  FFDPVCPDSRDSWPPLKKALDHYGSRVRLVIHLLPLPYHENAYATSRALHIVDLVNPSDT 120

Query: 121 FKLLEAFFGHQKQFYNAETRYLSRASVVDNIVKFGVEVLGNSYKNTLVTGFNDRDTDLLT 180
           FKLLEAFFG QKQFYNAETRYLSRA+V+DNIVKFGVEVLG+SYKNTLVTGF+DR+TDLLT
Sbjct: 121 FKLLEAFFGDQKQFYNAETRYLSRAAVMDNIVKFGVEVLGDSYKNTLVTGFSDRETDLLT 180

Query: 181 RVSFKFSTSRGVYGTPFFFINGFLAPDKGSPINYTGWRNLIDPLIKKNKRSGSQHLLL 236
           RVSFKFSTSRGVYGTPFFFINGFLAPDKGSP+NY  WRNLIDPLIKKNKRSGSQHL L
Sbjct: 181 RVSFKFSTSRGVYGTPFFFINGFLAPDKGSPLNYAEWRNLIDPLIKKNKRSGSQHLSL 238

[Close]

BLAST of HG10004763 vs. ExPASy TrEMBL
Match: A0A0A0LKC9 (Thioredoxin-like_fold domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G345990 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 2.4e-117
Identity = 211/236 (89.41%), Postives = 222/236 (94.07%), Query Frame = 0


Query: 1   MVKPKTSCSPLQS-LAFSFSFLAVFLLNAHAQSLPPAKFDGFVYGNHSLDLDTILIEAFF 60
           M K  ++ S LQS LAFSFSFLA+F L AHAQSLPP KFDGFVYGNHSLD +TI IEAFF
Sbjct: 1   MEKTNSTSSHLQSLLAFSFSFLALFHLTAHAQSLPPPKFDGFVYGNHSLDFNTIHIEAFF 60

Query: 61  DPVCPDSRDSWPPLKKALDHYGSRVRLVIHLLPLPYHDNAYAASRALHIVDLVNPSDTFK 120
           DPVCPDSRDSWPPLKKALDHYGSRVRLVIHLLPLPYHDNAYAASRALHIVDLVNPSDTFK
Sbjct: 61  DPVCPDSRDSWPPLKKALDHYGSRVRLVIHLLPLPYHDNAYAASRALHIVDLVNPSDTFK 120

Query: 121 LLEAFFGHQKQFYNAETRYLSRASVVDNIVKFGVEVLGNSYKNTLVTGFNDRDTDLLTRV 180
           LLEAFFG QKQFYNAETRYLSRA++VD++VKFGVEVLG+SYKNTLVTGFNDR+TDLLTRV
Sbjct: 121 LLEAFFGDQKQFYNAETRYLSRAAIVDSMVKFGVEVLGDSYKNTLVTGFNDRETDLLTRV 180

Query: 181 SFKFSTSRGVYGTPFFFINGFLAPDKGSPINYTGWRNLIDPLIKKNKRSGSQHLLL 236
           SFKFSTSRGVYGTPFFFINGFLAPDKGSP+NYT WRNLIDPLIKKNKRSGSQHL L
Sbjct: 181 SFKFSTSRGVYGTPFFFINGFLAPDKGSPLNYTEWRNLIDPLIKKNKRSGSQHLSL 236

[Close]

BLAST of HG10004763 vs. ExPASy TrEMBL
Match: A0A6J1GJ54 (uncharacterized protein LOC111454702 OS=Cucurbita moschata OX=3662 GN=LOC111454702 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 2.5e-114
Identity = 205/235 (87.23%), Postives = 214/235 (91.06%), Query Frame = 0


Query: 1   MVKPKTSCSPLQSLAFSFSFLAVFLLNAHAQSLPPAKFDGFVYGNHSLDLDTILIEAFFD 60
           M KPK+SCS LQS+A SF F   F LNAHAQSLPPAKFDGFVYGNHS DL+TI IEAF+D
Sbjct: 1   MEKPKSSCSTLQSIAVSFFFFFFFHLNAHAQSLPPAKFDGFVYGNHSGDLNTIRIEAFYD 60

Query: 61  PVCPDSRDSWPPLKKALDHYGSRVRLVIHLLPLPYHDNAYAASRALHIVDLVNPSDTFKL 120
           PVCPDSRDSWPPLKKALD+YGSRV LVIHLLPLPYHDNAYAASRALHIVDLVNPS TF L
Sbjct: 61  PVCPDSRDSWPPLKKALDYYGSRVHLVIHLLPLPYHDNAYAASRALHIVDLVNPSATFTL 120

Query: 121 LEAFFGHQKQFYNAETRYLSRASVVDNIVKFGVEVLGNSYKNTLVTGFNDRDTDLLTRVS 180
           LEAFFG QKQFYNAETRYLSRASVVDNIVKFGV+VLG SYKN LV GFNDRDTDLLTRVS
Sbjct: 121 LEAFFGQQKQFYNAETRYLSRASVVDNIVKFGVKVLGESYKNALVAGFNDRDTDLLTRVS 180

Query: 181 FKFSTSRGVYGTPFFFINGFLAPDKGSPINYTGWRNLIDPLIKKNKRSGSQHLLL 236
           FKFSTSRGVYGTPFFFINGFLAPD+GSP+N+TGWR LIDPLIKK KRS SQHL L
Sbjct: 181 FKFSTSRGVYGTPFFFINGFLAPDQGSPLNFTGWRKLIDPLIKKKKRSWSQHLSL 235

[Close]

BLAST of HG10004763 vs. ExPASy TrEMBL
Match: A0A6J1KJN0 (uncharacterized protein LOC111496311 OS=Cucurbita maxima OX=3661 GN=LOC111496311 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 3.2e-114
Identity = 207/237 (87.34%), Postives = 215/237 (90.72%), Query Frame = 0


Query: 1   MVKPKTSCSPLQSLAFSFSFLAVFL--LNAHAQSLPPAKFDGFVYGNHSLDLDTILIEAF 60
           M KPK+SCS LQS+A SF F   F   LNAHAQSLPPAKFDGFVYGNHS DL+TI IEAF
Sbjct: 1   MEKPKSSCSTLQSIAVSFFFFFFFFFHLNAHAQSLPPAKFDGFVYGNHSGDLNTIRIEAF 60

Query: 61  FDPVCPDSRDSWPPLKKALDHYGSRVRLVIHLLPLPYHDNAYAASRALHIVDLVNPSDTF 120
           +DPVCPDSRDSWPPLKKALD+YGSRVRLVIHLLPLPYHDNAYAASRALHIVDLVNPS TF
Sbjct: 61  YDPVCPDSRDSWPPLKKALDYYGSRVRLVIHLLPLPYHDNAYAASRALHIVDLVNPSATF 120

Query: 121 KLLEAFFGHQKQFYNAETRYLSRASVVDNIVKFGVEVLGNSYKNTLVTGFNDRDTDLLTR 180
            LLEAFFG QKQFYNAETRYLSRASVVDNIVKFGV+VLG SYKN LV GFNDRDTDLLTR
Sbjct: 121 TLLEAFFGQQKQFYNAETRYLSRASVVDNIVKFGVKVLGESYKNALVAGFNDRDTDLLTR 180

Query: 181 VSFKFSTSRGVYGTPFFFINGFLAPDKGSPINYTGWRNLIDPLIKKNKRSGSQHLLL 236
           VSFKFSTSRGVYGTPFFFINGFLAPD+GSP+NYTGWR LIDPLIKK KRS SQHL L
Sbjct: 181 VSFKFSTSRGVYGTPFFFINGFLAPDQGSPLNYTGWRKLIDPLIKKKKRSWSQHLSL 237

[Close]

BLAST of HG10004763 vs. TAIR 10
Match: AT1G76020.1 (Thioredoxin superfamily protein )

HSP 1 Score: 269.2 bits (687), Expect = 3.0e-72
Identity = 124/198 (62.63%), Postives = 155/198 (78.28%), Query Frame = 0


Query: 30  AQSLPPAKFDGFVY-GNHSLDLDTILIEAFFDPVCPDSRDSWPPLKKALDHYGSRVRLVI 89
           AQ +PP + DGFVY   H  D DTILIEA+FDPVCPDSRDSWPPLK+AL HYGSRV L++
Sbjct: 19  AQLVPPVRQDGFVYPPGHRFDPDTILIEAYFDPVCPDSRDSWPPLKQALHHYGSRVALLL 78

Query: 90  HLLPLPYHDNAYAASRALHIVDLVNPSDTFKLLEAFFGHQKQFYNAETRYLSRASVVDNI 149
           HLLPLPYHDNAY  SRALHIV+ V+ + TF LLE FF HQ  FYNA+T+ LSR +VV+ I
Sbjct: 79  HLLPLPYHDNAYVTSRALHIVNTVHANATFSLLEGFFKHQSLFYNAQTQLLSRPAVVEKI 138

Query: 150 VKFGVEVLGNSYKNTLVTGFNDRDTDLLTRVSFKFSTSRGVYGTPFFFINGFLAPDKGSP 209
           V+ G   LGNSY++ L +GF+D+ +D  TRVSFK+S SRGVYGTP F++NGF+  D  SP
Sbjct: 139 VELGTVSLGNSYQSVLKSGFSDKKSDRATRVSFKYSASRGVYGTPTFYVNGFVLSDAASP 198

Query: 210 INYTGWRNLIDPLIKKNK 227
            N+ GW+ +IDPL++ ++
Sbjct: 199 SNFGGWKKIIDPLVQAHE 216

[Close]

BLAST of HG10004763 vs. TAIR 10
Match: AT1G20225.1 (Thioredoxin superfamily protein )

HSP 1 Score: 253.4 bits (646), Expect = 1.7e-67
Identity = 116/195 (59.49%), Postives = 148/195 (75.90%), Query Frame = 0


Query: 30  AQSLPPAKFDGFVY-GNHSLDLDTILIEAFFDPVCPDSRDSWPPLKKALDHYGSRVRLVI 89
           AQ +PPA+ DGF+Y     +D DTILIEA+ DPVCPD RD+W PLK A+DHYGSRV LV+
Sbjct: 20  AQLIPPARRDGFLYPPGRKIDRDTILIEAYIDPVCPDCRDAWEPLKLAIDHYGSRVALVL 79

Query: 90  HLLPLPYHDNAYAASRALHIVDLVNPSDTFKLLEAFFGHQKQFYNAETRYLSRASVVDNI 149
           HL+PLP+HDNA+ ASRALHIVD +N + TF LLE  F HQ  FYN++T+ +SR +VV+ +
Sbjct: 80  HLIPLPFHDNAFVASRALHIVDTLNANATFNLLEGIFKHQTLFYNSQTQLMSRPAVVEEL 139

Query: 150 VKFGVEVLGNSYKNTLVTGFNDRDTDLLTRVSFKFSTSRGVYGTPFFFINGFLAPDKGSP 209
           +K G   LGNSY + L +GF++  +DL TRVSFK+S SRGV  TP F++NGF  P  GSP
Sbjct: 140 IKLGTVTLGNSYHSPLKSGFSNSKSDLATRVSFKYSVSRGVSATPTFYVNGFELPGAGSP 199

Query: 210 INYTGWRNLIDPLIK 224
            +Y GWR+ IDPL+K
Sbjct: 200 KDYEGWRDTIDPLVK 214

The following BLAST results are available for this feature:

BLAST of HG10004763 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886167.1	1.1e-129	97.87	uncharacterized protein LOC120076418 [Benincasa hispida]	[more]
KAA0064840.1	6.3e-120	90.76	Thioredoxin-like protein [Cucumis melo var. makuwa]	[more]
XP_008445330.1	9.0e-119	89.92	PREDICTED: uncharacterized protein LOC103488395 [Cucumis melo]	[more]
XP_004143004.1	5.0e-117	89.41	uncharacterized protein LOC101216804 [Cucumis sativus] >KGN62258.1 hypothetical ...	[more]
KAG7020442.1	3.0e-114	87.23	hypothetical protein SDJN02_17126 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of HG10004763 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10004763 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VCC7	3.0e-120	90.76	Thioredoxin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A1S3BD67	4.4e-119	89.92	uncharacterized protein LOC103488395 OS=Cucumis melo OX=3656 GN=LOC103488395 PE=...	[more]
A0A0A0LKC9	2.4e-117	89.41	Thioredoxin-like_fold domain-containing protein OS=Cucumis sativus OX=3659 GN=Cs...	[more]
A0A6J1GJ54	2.5e-114	87.23	uncharacterized protein LOC111454702 OS=Cucurbita moschata OX=3662 GN=LOC1114547...	[more]
A0A6J1KJN0	3.2e-114	87.34	uncharacterized protein LOC111496311 OS=Cucurbita maxima OX=3661 GN=LOC111496311...	[more]

BLAST of HG10004763 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76020.1	3.0e-72	62.63	Thioredoxin superfamily protein	[more]
AT1G20225.1	1.7e-67	59.49	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012336	Thioredoxin-like fold	PFAM	PF13462	Thioredoxin_4	coord: 52..219 e-value: 1.6E-7 score: 31.7
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 49..218 e-value: 5.5E-32 score: 113.3
None	No IPR available	PANTHER	PTHR33875	OS09G0542200 PROTEIN	coord: 16..229
None	No IPR available	CDD	cd02972	DsbA_family	coord: 55..124 e-value: 1.32514E-9 score: 52.0228
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 24..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10004763.1	HG10004763.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane