HG10004747 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10004747
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Ornithine decarboxylase-like
Location	Chr08: 20063639 .. 20064922 (+)
RNA-Seq Expression	HG10004747
Synteny	HG10004747

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGTCGACCAGCTTCTCGCCATTCCGGCGAATCCAAAAAAGAAGCTCCAACTCCTCCAAAACGTACCAGGCCTAAACCCTAAAACCATCACTCCCATTTCCCAACATGGCCTCCTCCATTTCATCCAATCCATTGCTCTCAAAAGTCCCGACGAACCCTTCTACATCTTCGACTTGGCCGTTGTCGCCACCCTCTTCGACCACTGGTCTCAGTCCCTTCCCACCGTCCGCCCTTTCTACGCCGTCAAATGCAACCCTAACCCGGCCCTCCTCGCCGCCATGGCCGCCCTCGGCTCCAATTTCGACTGCGCCAGTCGGGCCGAAATCCAATCTGTTTTAGACCTTGGCGTCTCCCCTGATCGAATCGTCTTTGCCAATCCTTGCAAACCCGAATCCCACATCGAATTCGCCGCCGCCGTTGGAGTTAACCTCACTACGTTCGATTCTGTTGACGAGATCGAGAAGATTCGACGTTGCCACCCGAAATCCTCTTTGTTGATTCGGATCAAACCATCCGACGACGGCGGCGCTCGGTGCCCATTGGGAAACAAATACGGCGCACTACCGGAAGAAATTATCCCTCTTCTCGAAGCTGCTAAATCTGCTGAACTCCCCGTCGTTGGCGTGTCATTTCACATTGGAAGTGGGGCTACTGAAACAGGGGCTTATTCGGCCGCCATCTCCGCTGCGAGAGAGGTTTTTGAAACGGCTGTCAGACTTGGCCTGCCGCCAATGAATGTGCTCAACATTGGCGGCGGATTCACTGCCGGACCCCAATTCGAAGAAGCGGCTGTGACAGTAAATTCGGCCCTCGAAGAGTATTTTCCGGCGGAAATGAGTATCACCCTCATGGCTGAACCGGGGCGGTTTTTTGCGGAATCGGCGTTCACTCTGGCCGTCAGCATCATCGGAAAACGGGTGAGGGGAGATCTAAGGGAGTATTGGATCAACGACGGGATTTATGGGTCCATGAACTGTATACTATACGATCATGCGACGGTGACTTGCAGGCCGTTGGCACTGAAATCGAACCGGAAAAACCCCACGTGCGGCGGAGGGAAAATGTACTGCGCCACTGTGTTCGGCCCCACGTGCGACGCTTTGGACACTGTTTTGACCGGACAGCAGCTGCCGGAGTTGGAGGTGGGAGACTGGCTGGTTTTTCCGAAGATGGGGGCTTACACGGCGGCAGCAGGATCCAATTTCAATGGGTTTAACACAGCGGCGATTGAGACTTATGTTGGGTACTCCGAACAGGGAAACGGCGCCGTATTGGATTGA

mRNA sequence

ATGGCCGTCGACCAGCTTCTCGCCATTCCGGCGAATCCAAAAAAGAAGCTCCAACTCCTCCAAAACGTACCAGGCCTAAACCCTAAAACCATCACTCCCATTTCCCAACATGGCCTCCTCCATTTCATCCAATCCATTGCTCTCAAAAGTCCCGACGAACCCTTCTACATCTTCGACTTGGCCGTTGTCGCCACCCTCTTCGACCACTGGTCTCAGTCCCTTCCCACCGTCCGCCCTTTCTACGCCGTCAAATGCAACCCTAACCCGGCCCTCCTCGCCGCCATGGCCGCCCTCGGCTCCAATTTCGACTGCGCCAGTCGGGCCGAAATCCAATCTGTTTTAGACCTTGGCGTCTCCCCTGATCGAATCGTCTTTGCCAATCCTTGCAAACCCGAATCCCACATCGAATTCGCCGCCGCCGTTGGAGTTAACCTCACTACGTTCGATTCTGTTGACGAGATCGAGAAGATTCGACGTTGCCACCCGAAATCCTCTTTGTTGATTCGGATCAAACCATCCGACGACGGCGGCGCTCGGTGCCCATTGGGAAACAAATACGGCGCACTACCGGAAGAAATTATCCCTCTTCTCGAAGCTGCTAAATCTGCTGAACTCCCCGTCGTTGGCGTGTCATTTCACATTGGAAGTGGGGCTACTGAAACAGGGGCTTATTCGGCCGCCATCTCCGCTGCGAGAGAGGTTTTTGAAACGGCTGTCAGACTTGGCCTGCCGCCAATGAATGTGCTCAACATTGGCGGCGGATTCACTGCCGGACCCCAATTCGAAGAAGCGGCTGTGACAGTAAATTCGGCCCTCGAAGAGTATTTTCCGGCGGAAATGAGTATCACCCTCATGGCTGAACCGGGGCGGTTTTTTGCGGAATCGGCGTTCACTCTGGCCGTCAGCATCATCGGAAAACGGGTGAGGGGAGATCTAAGGGAGTATTGGATCAACGACGGGATTTATGGGTCCATGAACTGTATACTATACGATCATGCGACGGTGACTTGCAGGCCGTTGGCACTGAAATCGAACCGGAAAAACCCCACGTGCGGCGGAGGGAAAATGTACTGCGCCACTGTGTTCGGCCCCACGTGCGACGCTTTGGACACTGTTTTGACCGGACAGCAGCTGCCGGAGTTGGAGGTGGGAGACTGGCTGGTTTTTCCGAAGATGGGGGCTTACACGGCGGCAGCAGGATCCAATTTCAATGGGTTTAACACAGCGGCGATTGAGACTTATGTTGGGTACTCCGAACAGGGAAACGGCGCCGTATTGGATTGA

Coding sequence (CDS)

ATGGCCGTCGACCAGCTTCTCGCCATTCCGGCGAATCCAAAAAAGAAGCTCCAACTCCTCCAAAACGTACCAGGCCTAAACCCTAAAACCATCACTCCCATTTCCCAACATGGCCTCCTCCATTTCATCCAATCCATTGCTCTCAAAAGTCCCGACGAACCCTTCTACATCTTCGACTTGGCCGTTGTCGCCACCCTCTTCGACCACTGGTCTCAGTCCCTTCCCACCGTCCGCCCTTTCTACGCCGTCAAATGCAACCCTAACCCGGCCCTCCTCGCCGCCATGGCCGCCCTCGGCTCCAATTTCGACTGCGCCAGTCGGGCCGAAATCCAATCTGTTTTAGACCTTGGCGTCTCCCCTGATCGAATCGTCTTTGCCAATCCTTGCAAACCCGAATCCCACATCGAATTCGCCGCCGCCGTTGGAGTTAACCTCACTACGTTCGATTCTGTTGACGAGATCGAGAAGATTCGACGTTGCCACCCGAAATCCTCTTTGTTGATTCGGATCAAACCATCCGACGACGGCGGCGCTCGGTGCCCATTGGGAAACAAATACGGCGCACTACCGGAAGAAATTATCCCTCTTCTCGAAGCTGCTAAATCTGCTGAACTCCCCGTCGTTGGCGTGTCATTTCACATTGGAAGTGGGGCTACTGAAACAGGGGCTTATTCGGCCGCCATCTCCGCTGCGAGAGAGGTTTTTGAAACGGCTGTCAGACTTGGCCTGCCGCCAATGAATGTGCTCAACATTGGCGGCGGATTCACTGCCGGACCCCAATTCGAAGAAGCGGCTGTGACAGTAAATTCGGCCCTCGAAGAGTATTTTCCGGCGGAAATGAGTATCACCCTCATGGCTGAACCGGGGCGGTTTTTTGCGGAATCGGCGTTCACTCTGGCCGTCAGCATCATCGGAAAACGGGTGAGGGGAGATCTAAGGGAGTATTGGATCAACGACGGGATTTATGGGTCCATGAACTGTATACTATACGATCATGCGACGGTGACTTGCAGGCCGTTGGCACTGAAATCGAACCGGAAAAACCCCACGTGCGGCGGAGGGAAAATGTACTGCGCCACTGTGTTCGGCCCCACGTGCGACGCTTTGGACACTGTTTTGACCGGACAGCAGCTGCCGGAGTTGGAGGTGGGAGACTGGCTGGTTTTTCCGAAGATGGGGGCTTACACGGCGGCAGCAGGATCCAATTTCAATGGGTTTAACACAGCGGCGATTGAGACTTATGTTGGGTACTCCGAACAGGGAAACGGCGCCGTATTGGATTGA

Protein sequence

MAVDQLLAIPANPKKKLQLLQNVPGLNPKTITPISQHGLLHFIQSIALKSPDEPFYIFDLAVVATLFDHWSQSLPTVRPFYAVKCNPNPALLAAMAALGSNFDCASRAEIQSVLDLGVSPDRIVFANPCKPESHIEFAAAVGVNLTTFDSVDEIEKIRRCHPKSSLLIRIKPSDDGGARCPLGNKYGALPEEIIPLLEAAKSAELPVVGVSFHIGSGATETGAYSAAISAAREVFETAVRLGLPPMNVLNIGGGFTAGPQFEEAAVTVNSALEEYFPAEMSITLMAEPGRFFAESAFTLAVSIIGKRVRGDLREYWINDGIYGSMNCILYDHATVTCRPLALKSNRKNPTCGGGKMYCATVFGPTCDALDTVLTGQQLPELEVGDWLVFPKMGAYTAAAGSNFNGFNTAAIETYVGYSEQGNGAVLD

Homology

[Close]

BLAST of HG10004747 vs. NCBI nr
Match: XP_038885888.1 (ornithine decarboxylase-like [Benincasa hispida])

HSP 1 Score: 822.0 bits (2122), Expect = 2.4e-234
Identity = 403/426 (94.60%), Postives = 417/426 (97.89%), Query Frame = 0


Query: 1   MAVDQLLAIPANPKKKLQLLQNVPGLNPKTITPISQHGLLHFIQSIALKSPDEPFYIFDL 60
           MAVDQLLA PANPKKKL LLQN PGLNPK+ITPISQHGLLHF+QS ALKSP+EPFY+FDL
Sbjct: 1   MAVDQLLAAPANPKKKLHLLQNAPGLNPKSITPISQHGLLHFLQSNALKSPNEPFYVFDL 60

Query: 61  AVVATLFDHWSQSLPTVRPFYAVKCNPNPALLAAMAALGSNFDCASRAEIQSVLDLGVSP 120
           AVVATLFDHWSQSLPTVRPFYAVKCNPNPALLAAMAALGSNFDCASRAEIQSVL LGVSP
Sbjct: 61  AVVATLFDHWSQSLPTVRPFYAVKCNPNPALLAAMAALGSNFDCASRAEIQSVLALGVSP 120

Query: 121 DRIVFANPCKPESHIEFAAAVGVNLTTFDSVDEIEKIRRCHPKSSLLIRIKPSDDGGARC 180
           DR+VFANPCKPESHIEFAAAVGVNLTTFDSVDEIEKIRRCHPKS+LLIRIKPSDDGGARC
Sbjct: 121 DRVVFANPCKPESHIEFAAAVGVNLTTFDSVDEIEKIRRCHPKSALLIRIKPSDDGGARC 180

Query: 181 PLGNKYGALPEEIIPLLEAAKSAELPVVGVSFHIGSGATETGAYSAAISAAREVFETAVR 240
           PLGNKYGALPEEIIPLLEAAKSAELPVVGVSFHIGSGATETGAYSAAISAAR VFETAVR
Sbjct: 181 PLGNKYGALPEEIIPLLEAAKSAELPVVGVSFHIGSGATETGAYSAAISAARGVFETAVR 240

Query: 241 LGLPPMNVLNIGGGFTAGPQFEEAAVTVNSALEEYFPAEMSITLMAEPGRFFAESAFTLA 300
           LGLPPMNVLNIGGGFTAGPQFEEAAVTVNSAL+EYFPAE+++TLMAEPGRFFAESAFTLA
Sbjct: 241 LGLPPMNVLNIGGGFTAGPQFEEAAVTVNSALKEYFPAELNVTLMAEPGRFFAESAFTLA 300

Query: 301 VSIIGKRVRGDLREYWINDGIYGSMNCILYDHATVTCRPLALKSNRKNPTCGGGKMYCAT 360
           VSIIGKRVRGDLREYWINDGIYGSMNCILYDHATVTCRPLA+KSN KNPTCGGG+MY +T
Sbjct: 301 VSIIGKRVRGDLREYWINDGIYGSMNCILYDHATVTCRPLAMKSNWKNPTCGGGRMYEST 360

Query: 361 VFGPTCDALDTVLTGQQLPELEVGDWLVFPKMGAYTAAAGSNFNGFNTAAIETYVGYSEQ 420
           VFGPTCDALDTVLTGQQLPELEVGDWLVFPKMGAYTAAAGSNFNGFNTAAIETY+ YSEQ
Sbjct: 361 VFGPTCDALDTVLTGQQLPELEVGDWLVFPKMGAYTAAAGSNFNGFNTAAIETYIVYSEQ 420

Query: 421 GNGAVL 427
           GNGAVL
Sbjct: 421 GNGAVL 426

[Close]

BLAST of HG10004747 vs. NCBI nr
Match: KAA0064856.1 (ornithine decarboxylase-like [Cucumis melo var. makuwa])

HSP 1 Score: 770.4 bits (1988), Expect = 8.2e-219
Identity = 377/427 (88.29%), Postives = 400/427 (93.68%), Query Frame = 0


Query: 1   MAVDQLLAIPANPKKKLQLLQNVPGLNPKTITPISQHGLLHFIQSIALKSPDEPFYIFDL 60
           MAVDQLL +PAN KKKL LLQN PGLNPKTITPISQHGLLHF+QSI LK+ D+PFY FDL
Sbjct: 1   MAVDQLLPVPANSKKKLHLLQNAPGLNPKTITPISQHGLLHFLQSIVLKTSDKPFYTFDL 60

Query: 61  AVVATLFDHWSQSLPTVRPFYAVKCNPNPALLAAMAALGSNFDCASRAEIQSVLDLGVSP 120
           AVVATLFD WS SLPTVRPFYAVKCNPNP  LAAMAALGSNFDCASRAEIQSVL LGVSP
Sbjct: 61  AVVATLFDLWSHSLPTVRPFYAVKCNPNPDFLAAMAALGSNFDCASRAEIQSVLALGVSP 120

Query: 121 DRIVFANPCKPESHIEFAAAVGVNLTTFDSVDEIEKIRRCHPKSSLLIRIKPSDDGGARC 180
           DRIVFANPCKPESHIEFAA VGVNLTTFDSVDEI+KIRRCHPKS+LLIRIKPSDDG ARC
Sbjct: 121 DRIVFANPCKPESHIEFAATVGVNLTTFDSVDEIQKIRRCHPKSALLIRIKPSDDGSARC 180

Query: 181 PLGNKYGALPEEIIPLLEAAKSAELPVVGVSFHIGSGATETGAYSAAISAAREVFETAVR 240
           PLGNKYGALPEEIIPLL+AAKSAEL VVGVSFHIGSGATET AYSAAI+AAR VFETAVR
Sbjct: 181 PLGNKYGALPEEIIPLLQAAKSAELAVVGVSFHIGSGATETRAYSAAIAAARGVFETAVR 240

Query: 241 LGLPPMNVLNIGGGFTAGPQFEEAAVTVNSALEEYFPAEMSITLMAEPGRFFAESAFTLA 300
           LGLPPMNVLNIGGGFTAGPQFEEAAV V SA++EYFP +++I LMAEPGRFFAESAFTLA
Sbjct: 241 LGLPPMNVLNIGGGFTAGPQFEEAAVAVKSAIKEYFPEDLNIALMAEPGRFFAESAFTLA 300

Query: 301 VSIIGKRVRGDLREYWINDGIYGSMNCILYDHATVTCRPLALKSNRKNPTCGGGKMYCAT 360
           V IIGKRVRGDLREYWINDGIYGSMNCILYDHAT++CR LA+KSN +NPTCGGG+M+ +T
Sbjct: 301 VHIIGKRVRGDLREYWINDGIYGSMNCILYDHATLSCRALAVKSNMENPTCGGGRMHRST 360

Query: 361 VFGPTCDALDTVLTGQQLPELEVGDWLVFPKMGAYTAAAGSNFNGFNTAAIETYVGYSEQ 420
           VFGPTCDALDTVLTG+QLPELEVGDWLVFPKMGAYTAAAGSNFNGFNTAAIETY+ YSEQ
Sbjct: 361 VFGPTCDALDTVLTGKQLPELEVGDWLVFPKMGAYTAAAGSNFNGFNTAAIETYIVYSEQ 420

Query: 421 GNGAVLD 428
           GNGAV +
Sbjct: 421 GNGAVFE 427

[Close]

BLAST of HG10004747 vs. NCBI nr
Match: XP_008445311.1 (PREDICTED: ornithine decarboxylase-like [Cucumis melo])

HSP 1 Score: 769.2 bits (1985), Expect = 1.8e-218
Identity = 376/427 (88.06%), Postives = 400/427 (93.68%), Query Frame = 0


Query: 1   MAVDQLLAIPANPKKKLQLLQNVPGLNPKTITPISQHGLLHFIQSIALKSPDEPFYIFDL 60
           MAVDQLL +PAN KKKL LLQN PGLNPKTITPISQHGLLHF+QSI LK+ D+PFY FDL
Sbjct: 1   MAVDQLLPVPANSKKKLHLLQNAPGLNPKTITPISQHGLLHFLQSIVLKTSDKPFYTFDL 60

Query: 61  AVVATLFDHWSQSLPTVRPFYAVKCNPNPALLAAMAALGSNFDCASRAEIQSVLDLGVSP 120
           AVVATLFD WS SLPTVRPFYAVKCNPNP  LAAMAALGSNFDCASRAEIQSVL LGVSP
Sbjct: 61  AVVATLFDLWSHSLPTVRPFYAVKCNPNPDFLAAMAALGSNFDCASRAEIQSVLALGVSP 120

Query: 121 DRIVFANPCKPESHIEFAAAVGVNLTTFDSVDEIEKIRRCHPKSSLLIRIKPSDDGGARC 180
           DRIVFANPCKPESHIEFAA VGVNLTTFDSVDEI+KIRRCHPKS+LLIRIKPSDDG ARC
Sbjct: 121 DRIVFANPCKPESHIEFAATVGVNLTTFDSVDEIQKIRRCHPKSALLIRIKPSDDGSARC 180

Query: 181 PLGNKYGALPEEIIPLLEAAKSAELPVVGVSFHIGSGATETGAYSAAISAAREVFETAVR 240
           PLGNKYGALPEEIIPLL+AAKSAEL VVGVSFHIGSGATET AYSAAI+AAR VFETAVR
Sbjct: 181 PLGNKYGALPEEIIPLLQAAKSAELAVVGVSFHIGSGATETRAYSAAIAAARGVFETAVR 240

Query: 241 LGLPPMNVLNIGGGFTAGPQFEEAAVTVNSALEEYFPAEMSITLMAEPGRFFAESAFTLA 300
           LGLPPMNVLNIGGGFTAGPQFEEAAV V SA++EYFP +++I LMAEPGRFFAESAFTLA
Sbjct: 241 LGLPPMNVLNIGGGFTAGPQFEEAAVAVKSAIKEYFPEDLNIALMAEPGRFFAESAFTLA 300

Query: 301 VSIIGKRVRGDLREYWINDGIYGSMNCILYDHATVTCRPLALKSNRKNPTCGGGKMYCAT 360
           V IIGKRVRGDLREYWINDGIYGSMNCILYDHAT++CR LA+KSN +NPTCGGG+M+ +T
Sbjct: 301 VHIIGKRVRGDLREYWINDGIYGSMNCILYDHATLSCRALAVKSNMENPTCGGGRMHRST 360

Query: 361 VFGPTCDALDTVLTGQQLPELEVGDWLVFPKMGAYTAAAGSNFNGFNTAAIETYVGYSEQ 420
           VFGPTCDALDTVLTG+QLPELEVGDWLVFPKMGAYTAAAGSNFNGFNTA+IETY+ YSEQ
Sbjct: 361 VFGPTCDALDTVLTGKQLPELEVGDWLVFPKMGAYTAAAGSNFNGFNTASIETYIVYSEQ 420

Query: 421 GNGAVLD 428
           GNGAV +
Sbjct: 421 GNGAVFE 427

[Close]

BLAST of HG10004747 vs. NCBI nr
Match: XP_023002363.1 (ornithine decarboxylase-like [Cucurbita maxima])

HSP 1 Score: 704.5 bits (1817), Expect = 5.5e-199
Identity = 344/410 (83.90%), Postives = 375/410 (91.46%), Query Frame = 0


Query: 19  LLQNVPGLNPKTITPISQHGLLHFIQSIALKS--PDEPFYIFDLAVVATLFDHWSQSLPT 78
           LLQ  PGL+PK+ITPI QHGLL F+QSIAL S  P+EPFYIFDLA +  L + W+QSLPT
Sbjct: 7   LLQTAPGLSPKSITPIPQHGLLPFLQSIALSSDNPNEPFYIFDLATITALMNLWTQSLPT 66

Query: 79  VRPFYAVKCNPNPALLAAMAALGSNFDCASRAEIQSVLDLGVSPDRIVFANPCKPESHIE 138
           VRPFYAVKCNPNPALLA MAALGSNFDCAS +EIQ+VL LGVSPDRIVFANPCKPESHI+
Sbjct: 67  VRPFYAVKCNPNPALLAVMAALGSNFDCASTSEIQAVLALGVSPDRIVFANPCKPESHIK 126

Query: 139 FAAAVGVNLTTFDSVDEIEKIRRCHPKSSLLIRIKPSDDGGARCPLGNKYGALPEEIIPL 198
           FAA VGVNLTTFDSV EIEKIR CHPKS+LL+RIKP +DGGARC LG KYGALPEEIIPL
Sbjct: 127 FAADVGVNLTTFDSVYEIEKIRSCHPKSALLLRIKPPEDGGARCQLGQKYGALPEEIIPL 186

Query: 199 LEAAKSAELPVVGVSFHIGSGATETGAYSAAISAAREVFETAVRLGLPPMNVLNIGGGFT 258
           LEAAK+A+L VVGVSFHIGSG  ETGAYS+AI+AAR VF+TAVRL LPPMNVLNIGGGFT
Sbjct: 187 LEAAKAADLAVVGVSFHIGSGDAETGAYSSAIAAARGVFDTAVRLALPPMNVLNIGGGFT 246

Query: 259 AGPQFEEAAVTVNSALEEYFPAEMSITLMAEPGRFFAESAFTLAVSIIGKRVRGDLREYW 318
           AGPQFE+AA+T+NSAL+EYFPAE++IT+MAEPGR+FAESAFTLAV++IGKRVRGD REYW
Sbjct: 247 AGPQFEKAALTINSALQEYFPAELNITVMAEPGRYFAESAFTLAVNVIGKRVRGDHREYW 306

Query: 319 INDGIYGSMNCILYDHATVTCRPLALKSNRKNPTCGGGKMYCATVFGPTCDALDTVLTGQ 378
           INDGIYGSMNCILYDHATVTC PLALKSNRKNPTCGG KMY  TVFGPTCD LDTVLTG 
Sbjct: 307 INDGIYGSMNCILYDHATVTCTPLALKSNRKNPTCGGMKMYGTTVFGPTCDGLDTVLTGY 366

Query: 379 QLPELEVGDWLVFPKMGAYTAAAGSNFNGFNTAAIETYVGYSEQGNGAVL 427
            LP+LEVGDWLV+PKMGAYTAAAGSNFNGFNTAAIETY+ YSEQGNGAVL
Sbjct: 367 PLPDLEVGDWLVWPKMGAYTAAAGSNFNGFNTAAIETYIVYSEQGNGAVL 416

[Close]

BLAST of HG10004747 vs. NCBI nr
Match: XP_023538083.1 (ornithine decarboxylase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 704.5 bits (1817), Expect = 5.5e-199
Identity = 344/410 (83.90%), Postives = 377/410 (91.95%), Query Frame = 0


Query: 19  LLQNVPGLNPKTITPISQHGLLHFIQSIALKS--PDEPFYIFDLAVVATLFDHWSQSLPT 78
           LLQ   GL+PK+ITPI QHGLLHF+QSIAL S  P+EPFYIFDLA +  L   W+QSLPT
Sbjct: 7   LLQTALGLSPKSITPIPQHGLLHFLQSIALSSDNPNEPFYIFDLATITALMSLWTQSLPT 66

Query: 79  VRPFYAVKCNPNPALLAAMAALGSNFDCASRAEIQSVLDLGVSPDRIVFANPCKPESHIE 138
           VRPFYAVKCNPNPALLAAMAALGSNFDCAS +EIQ+VL LGVSPDRIVFANPCKPESHI+
Sbjct: 67  VRPFYAVKCNPNPALLAAMAALGSNFDCASTSEIQAVLALGVSPDRIVFANPCKPESHIK 126

Query: 139 FAAAVGVNLTTFDSVDEIEKIRRCHPKSSLLIRIKPSDDGGARCPLGNKYGALPEEIIPL 198
           FAAAVGVNLTTFDSV EIEKIR CHPKS+LL+RIKP +DGGARC LG KYGALP+EIIPL
Sbjct: 127 FAAAVGVNLTTFDSVYEIEKIRSCHPKSALLLRIKPPEDGGARCQLGQKYGALPDEIIPL 186

Query: 199 LEAAKSAELPVVGVSFHIGSGATETGAYSAAISAAREVFETAVRLGLPPMNVLNIGGGFT 258
           LEAAK+A+L VVGVSFHIGSG  ET AYS+AI+AAR VF+TAVRL LPPMNVLNIGGGFT
Sbjct: 187 LEAAKAADLAVVGVSFHIGSGDAETEAYSSAIAAARGVFDTAVRLALPPMNVLNIGGGFT 246

Query: 259 AGPQFEEAAVTVNSALEEYFPAEMSITLMAEPGRFFAESAFTLAVSIIGKRVRGDLREYW 318
           AGPQFE+AAVT+NSAL+EYFPAE++IT+MAEPGR+FAESAFTLAV++IGKRVRGD REYW
Sbjct: 247 AGPQFEKAAVTINSALKEYFPAELNITVMAEPGRYFAESAFTLAVNVIGKRVRGDHREYW 306

Query: 319 INDGIYGSMNCILYDHATVTCRPLALKSNRKNPTCGGGKMYCATVFGPTCDALDTVLTGQ 378
           INDGIYGSMNCILYDHATV+C PLALKSNRKNPTCGG KMY +TVFGPTCD LDTVLTG 
Sbjct: 307 INDGIYGSMNCILYDHATVSCTPLALKSNRKNPTCGGMKMYGSTVFGPTCDGLDTVLTGY 366

Query: 379 QLPELEVGDWLVFPKMGAYTAAAGSNFNGFNTAAIETYVGYSEQGNGAVL 427
           QLP+LEVGDWLV+PKMGAYTAAAGSNFNGFNTAAIETY+ YS+QGNGAVL
Sbjct: 367 QLPDLEVGDWLVWPKMGAYTAAAGSNFNGFNTAAIETYIVYSDQGNGAVL 416

[Close]

BLAST of HG10004747 vs. ExPASy Swiss-Prot
Match: P50134 (Ornithine decarboxylase OS=Datura stramonium OX=4076 PE=2 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 4.4e-151
Identity = 256/393 (65.14%), Postives = 307/393 (78.12%), Query Frame = 0


Query: 29  KTITPISQHGLLHFIQSI---ALKSPDEPFYIFDLAVVATLFDHWSQSLPTVRPFYAVKC 88
           + + P+S+  L  F+ SI    L+   +PFY+ DL  V +L D W+  LP +RPFYAVKC
Sbjct: 36  RKVVPLSRDALQDFMVSIITQKLQDEKQPFYVLDLGEVVSLMDQWNAGLPNIRPFYAVKC 95

Query: 89  NPNPALLAAMAALGSNFDCASRAEIQSVLDLGVSPDRIVFANPCKPESHIEFAAAVGVNL 148
           NP P+ L+ ++A+GSNFDCASRAEI+ VL LG+SPDRIVFANPCKPES I FAA VGVNL
Sbjct: 96  NPEPSFLSMLSAMGSNFDCASRAEIEYVLSLGISPDRIVFANPCKPESDIIFAAKVGVNL 155

Query: 149 TTFDSVDEIEKIRRCHPKSSLLIRIKPSDDGGARCPLGNKYGALPEEIIPLLEAAKSAEL 208
           TTFDS DE+ KIR+ HPK  LL+RIKP DDG ARCP+G KYGALPEE+ PLL  A++A L
Sbjct: 156 TTFDSEDEVYKIRKHHPKCELLLRIKPMDDGNARCPMGPKYGALPEEVEPLLRTAQAARL 215

Query: 209 PVVGVSFHIGSGATETGAYSAAISAAREVFETAVRLGLPPMNVLNIGGGFTAGPQFEEAA 268
            V GVSFHIGSG  ++ AY  AI+AA+ VFETA R G+  M VL+IGGGFT+G QF  A+
Sbjct: 216 TVSGVSFHIGSGDADSKAYLGAIAAAKGVFETAARFGMSKMTVLDIGGGFTSGHQFTTAS 275

Query: 269 VTVNSALEEYFPAEMSITLMAEPGRFFAESAFTLAVSIIGKRVRGDLREYWINDGIYGSM 328
             V SALE++F  E  +T++AEPGRFFAE+AFTLA +IIGKRVRG+LREYWINDG+YGSM
Sbjct: 276 AAVRSALEQHFHDEQELTIIAEPGRFFAETAFTLATTIIGKRVRGELREYWINDGLYGSM 335

Query: 329 NCILYDHATVTCRPLALKSNRKNPTCGGGKMYCATVFGPTCDALDTVLTGQQLPELEVGD 388
           NC+LYDHATV   PLA  SNR N  CGG K + +TVFGPTCDALDTVL   QLPEL+V D
Sbjct: 336 NCVLYDHATVNATPLACMSNRSNLNCGGSKTFPSTVFGPTCDALDTVLRDYQLPELQVND 395

Query: 389 WLVFPKMGAYTAAAGSNFNGFNTAAIETYVGYS 419
           WL+FP MGAYT AAGSNFNGFNT+AI T++ Y+
Sbjct: 396 WLIFPNMGAYTKAAGSNFNGFNTSAIVTHLAYA 428

[Close]

BLAST of HG10004747 vs. ExPASy Swiss-Prot
Match: O22616 (Ornithine decarboxylase OS=Solanum lycopersicum OX=4081 GN=ODC PE=2 SV=2)

HSP 1 Score: 528.1 bits (1359), Expect = 9.3e-149
Identity = 252/393 (64.12%), Postives = 307/393 (78.12%), Query Frame = 0


Query: 29  KTITPISQHGLLHFIQSI---ALKSPDEPFYIFDLAVVATLFDHWSQSLPTVRPFYAVKC 88
           + + P+S+  L  F+ SI    L+   +PFY+ DL  V +L + W+ +LP +RPFYAVKC
Sbjct: 36  RKVVPLSKDALQDFMVSIITQKLQDDKQPFYVLDLGEVVSLMEQWNSALPNIRPFYAVKC 95

Query: 89  NPNPALLAAMAALGSNFDCASRAEIQSVLDLGVSPDRIVFANPCKPESHIEFAAAVGVNL 148
           NP P+ L+ ++A+GSNFDCASRAEI+ VL  G+SPDRIVFANPCKPES I FA  +GVNL
Sbjct: 96  NPEPSFLSMLSAMGSNFDCASRAEIEYVLSHGISPDRIVFANPCKPESDIIFAEKIGVNL 155

Query: 149 TTFDSVDEIEKIRRCHPKSSLLIRIKPSDDGGARCPLGNKYGALPEEIIPLLEAAKSAEL 208
           TT+DS DE+ KIR+ HPK  LL+RIKP  DG ARCP+G KYGALPEEI PLL  A++A L
Sbjct: 156 TTYDSEDEVYKIRKHHPKCELLLRIKPMTDGNARCPMGPKYGALPEEIEPLLRTAQAARL 215

Query: 209 PVVGVSFHIGSGATETGAYSAAISAAREVFETAVRLGLPPMNVLNIGGGFTAGPQFEEAA 268
            V GVSFHIGSG  ++ AY  AI+AA++VFETA +LG+P M VL+IGGGFT+G QF  AA
Sbjct: 216 TVSGVSFHIGSGDADSNAYLGAIAAAKQVFETAAQLGMPKMTVLDIGGGFTSGHQFTTAA 275

Query: 269 VTVNSALEEYFPAEMSITLMAEPGRFFAESAFTLAVSIIGKRVRGDLREYWINDGIYGSM 328
             V SALE +F     +T++AEPGRFFAE+AFTLA +IIGKRVRG+L+EYWINDG+YGSM
Sbjct: 276 PAVKSALETHFHDFPELTIIAEPGRFFAETAFTLATTIIGKRVRGELKEYWINDGLYGSM 335

Query: 329 NCILYDHATVTCRPLALKSNRKNPTCGGGKMYCATVFGPTCDALDTVLTGQQLPELEVGD 388
           NC+LYDHATVT  PLA  SNR N  CGG K + +TVFGPTCDALDTVL   QLPEL+V D
Sbjct: 336 NCVLYDHATVTATPLACMSNRNNLNCGGSKTFPSTVFGPTCDALDTVLRDYQLPELQVND 395

Query: 389 WLVFPKMGAYTAAAGSNFNGFNTAAIETYVGYS 419
           WL+FP MGAYT AAGSNFNGFNT+AI T++ Y+
Sbjct: 396 WLIFPNMGAYTKAAGSNFNGFNTSAIVTHLAYA 428

[Close]

BLAST of HG10004747 vs. ExPASy Swiss-Prot
Match: Q8S3N2 (Ornithine decarboxylase OS=Capsicum annuum OX=4072 GN=ODC PE=2 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 3.5e-148
Identity = 251/397 (63.22%), Postives = 309/397 (77.83%), Query Frame = 0


Query: 25  GLNPKTITPISQHGLLHFIQSI---ALKSPDEPFYIFDLAVVATLFDHWSQSLPTVRPFY 84
           G   + + P+S+  L  F+ SI    L+   +PFY+ DL  V +L D W+ +LP VRPFY
Sbjct: 36  GDTTRKVVPLSKDALQDFMVSIITQKLQGEKKPFYVLDLGEVVSLMDQWNVALPNVRPFY 95

Query: 85  AVKCNPNPALLAAMAALGSNFDCASRAEIQSVLDLGVSPDRIVFANPCKPESHIEFAAAV 144
           AVKCNP P+ L+ +AA+GSNF CASRAEI+ VL LG+SP+RIVFANPCKPES I FA  V
Sbjct: 96  AVKCNPEPSFLSMLAAMGSNFVCASRAEIEYVLSLGISPERIVFANPCKPESDIIFAEKV 155

Query: 145 GVNLTTFDSVDEIEKIRRCHPKSSLLIRIKPSDDGGARCPLGNKYGALPEEIIPLLEAAK 204
           GVNLTT+DS DE+ KI++ HPK  LL+RIKP +DG ARCP+G KYGALPEEI PLL  A+
Sbjct: 156 GVNLTTYDSEDEVYKIKKHHPKCELLLRIKPMNDGNARCPMGPKYGALPEEIEPLLRIAQ 215

Query: 205 SAELPVVGVSFHIGSGATETGAYSAAISAAREVFETAVRLGLPPMNVLNIGGGFTAGPQF 264
           ++ L V GVSFHIGSG  ++ AY  AI+AA++VFETA + G+  MNVL+IGGGFT+G QF
Sbjct: 216 ASRLTVSGVSFHIGSGDADSNAYLGAIAAAKQVFETAAKFGMSKMNVLDIGGGFTSGHQF 275

Query: 265 EEAAVTVNSALEEYFPAEMSITLMAEPGRFFAESAFTLAVSIIGKRVRGDLREYWINDGI 324
             AA  V SAL+++F  E  +T++AEPGRFFAE+AFTLA +IIGKRVRGDLREYWINDG+
Sbjct: 276 TTAATAVKSALQQHFSNEPELTIIAEPGRFFAETAFTLATTIIGKRVRGDLREYWINDGL 335

Query: 325 YGSMNCILYDHATVTCRPLALKSNRKNPTCGGGKMYCATVFGPTCDALDTVLTGQQLPEL 384
           YGSMNC+LYDHATVT  PLA  SNR N  C G KM+ +T+FGPTCDALDTVL    +PEL
Sbjct: 336 YGSMNCVLYDHATVTATPLACMSNRVNLNCSGSKMFPSTIFGPTCDALDTVLRDYHVPEL 395

Query: 385 EVGDWLVFPKMGAYTAAAGSNFNGFNTAAIETYVGYS 419
           +V DW++FP MGAYT AAGSNFNGFNT+AI T++ Y+
Sbjct: 396 QVNDWVIFPNMGAYTKAAGSNFNGFNTSAIVTHLAYA 432

[Close]

BLAST of HG10004747 vs. ExPASy Swiss-Prot
Match: P07805 (Ornithine decarboxylase OS=Trypanosoma brucei brucei OX=5702 PE=1 SV=2)

HSP 1 Score: 343.6 bits (880), Expect = 3.2e-93
Identity = 176/388 (45.36%), Postives = 252/388 (64.95%), Query Frame = 0


Query: 44  QSIALKSPDE--PFYIFDLAVVATLFDHWSQSLPTVRPFYAVKCNPNPALLAAMAALGSN 103
           + I++ + DE  PF++ DL  +    + W + LP V PFYAVKCN +  +L  +AALG+ 
Sbjct: 25  KKISMNTCDEGDPFFVADLGDIVRKHETWKKCLPRVTPFYAVKCNDDWRVLGTLAALGTG 84

Query: 104 FDCASRAEIQSVLDLGVSPDRIVFANPCKPESHIEFAAAVGVNLTTFDSVDEIEKIRRCH 163
           FDCAS  EIQ V  +GV P++I++ANPCK  SHI +A   GV++ TFD VDE+EK+ + H
Sbjct: 85  FDCASNTEIQRVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTH 144

Query: 164 PKSSLLIRIKPSDDGGARCPLGNKYGALPEEIIPLLEAAKSAELPVVGVSFHIGSGATET 223
           PK+ +++RI  +DD  ARC L  K+GA  E+   +LE AK   + V GVSFH+GSG+T+ 
Sbjct: 145 PKAKMVLRIS-TDDSLARCRLSVKFGAKVEDCRFILEQAKKLNIDVTGVSFHVGSGSTDA 204

Query: 224 GAYSAAISAAREVFETAVRLGLPPMNVLNIGGGF----TAGPQFEEAAVTVNSALEEYFP 283
             ++ AIS +R VF+    LG   M++L+IGGGF     A  +FEE A  +N+ALE++FP
Sbjct: 205 STFAQAISDSRFVFDMGTELGF-NMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHFP 264

Query: 284 AEMSITLMAEPGRFFAESAFTLAVSIIGKRVRGDLRE--------------YWINDGIYG 343
            ++ +T++AEPGR++  SAFTLAV++I K+V   ++               Y++NDG+YG
Sbjct: 265 PDLKLTIVAEPGRYYVASAFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVYG 324

Query: 344 SMNCILYDHATVTCRPLALKSNRKNPTCGGGKMYCATVFGPTCDALDTVLTGQQLPELEV 403
           S NCILYDHA V  RPL  +    N      K+Y ++V+GPTCD LD ++    LPE++V
Sbjct: 325 SFNCILYDHAVV--RPLPQREPIPNE-----KLYPSSVWGPTCDGLDQIVERYYLPEMQV 384

Query: 404 GDWLVFPKMGAYTAAAGSNFNGFNTAAI 412
           G+WL+F  MGAYT    S+FNGF +  I
Sbjct: 385 GEWLLFEDMGAYTVVGTSSFNGFQSPTI 403

[Close]

BLAST of HG10004747 vs. ExPASy Swiss-Prot
Match: P27118 (Ornithine decarboxylase (Fragment) OS=Gallus gallus OX=9031 GN=ODC1 PE=2 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 3.7e-89
Identity = 175/387 (45.22%), Postives = 239/387 (61.76%), Query Frame = 0


Query: 43  IQSIALKSPDEPFYIFDLAVVATLFDHWSQSLPTVRPFYAVKCNPNPALLAAMAALGSNF 102
           I  ++     + FY+ DL  +      W ++LP V PFYAVKCN + A++  +A LG+ F
Sbjct: 18  INEVSSSDDKDAFYVADLGDIVKKHMRWHKALPRVTPFYAVKCNDSEAVVKTLAVLGAGF 77

Query: 103 DCASRAEIQSVLDLGVSPDRIVFANPCKPESHIEFAAAVGVNLTTFDSVDEIEKIRRCHP 162
           DCAS+ EIQ V  +GV P+RI++ANPCK  S I+ AA  GV + TFDS  E+ KI R HP
Sbjct: 78  DCASKTEIQLVQSIGVPPERIIYANPCKQLSQIKHAANSGVRMMTFDSEVELMKIARPHP 137

Query: 163 KSSLLIRIKPSDDGGARCPLGNKYGALPEEIIPLLEAAKSAELPVVGVSFHIGSGATETG 222
           K+ LL+RI  +DD  A C L  K+GA  +    LLE AK  +L +VGVSFH+GSG T+  
Sbjct: 138 KAKLLLRI-TTDDSKAVCRLSVKFGATLKTSRLLLERAKELDLAIVGVSFHVGSGCTDPE 197

Query: 223 AYSAAISAAREVFETAVRLGLPPMNVLNIGGGFTAGP----QFEEAAVTVNSALEEYFPA 282
            +  AIS AR VF+    LG   M +L+IGGGF        +FEE    +N AL++YFP 
Sbjct: 198 TFVQAISDARCVFDMGAELGF-NMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPL 257

Query: 283 EMSITLMAEPGRFFAESAFTLAVSIIGKRV----------RGDLRE----YWINDGIYGS 342
           +  +T++AEPGR++  SAFTLAV+II K++            D+ +    Y++NDG+YGS
Sbjct: 258 DSEVTIIAEPGRYYVASAFTLAVNIIAKKIVSKEQTGSDDEDDVNDKTLMYYVNDGVYGS 317

Query: 343 MNCILYDHATVTCRPLALKSNRKNPTCGGGKMYCATVFGPTCDALDTVLTGQQLPELEVG 402
            NCILYDHA V  +P+  K  + +  C     Y  +++GPTCD LD ++    +PEL+VG
Sbjct: 318 FNCILYDHAHV--KPVLQKRPKPDDGC-----YSCSIWGPTCDGLDRIVERCNMPELQVG 377

Query: 403 DWLVFPKMGAYTAAAGSNFNGFNTAAI 412
           DW++F  MGAYT AA S FNGF    I
Sbjct: 378 DWILFENMGAYTVAAASTFNGFQRPTI 395

[Close]

BLAST of HG10004747 vs. ExPASy TrEMBL
Match: A0A5A7VEV5 (Ornithine decarboxylase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001690 PE=3 SV=1)

HSP 1 Score: 770.4 bits (1988), Expect = 4.0e-219
Identity = 377/427 (88.29%), Postives = 400/427 (93.68%), Query Frame = 0


Query: 1   MAVDQLLAIPANPKKKLQLLQNVPGLNPKTITPISQHGLLHFIQSIALKSPDEPFYIFDL 60
           MAVDQLL +PAN KKKL LLQN PGLNPKTITPISQHGLLHF+QSI LK+ D+PFY FDL
Sbjct: 1   MAVDQLLPVPANSKKKLHLLQNAPGLNPKTITPISQHGLLHFLQSIVLKTSDKPFYTFDL 60

Query: 61  AVVATLFDHWSQSLPTVRPFYAVKCNPNPALLAAMAALGSNFDCASRAEIQSVLDLGVSP 120
           AVVATLFD WS SLPTVRPFYAVKCNPNP  LAAMAALGSNFDCASRAEIQSVL LGVSP
Sbjct: 61  AVVATLFDLWSHSLPTVRPFYAVKCNPNPDFLAAMAALGSNFDCASRAEIQSVLALGVSP 120

Query: 121 DRIVFANPCKPESHIEFAAAVGVNLTTFDSVDEIEKIRRCHPKSSLLIRIKPSDDGGARC 180
           DRIVFANPCKPESHIEFAA VGVNLTTFDSVDEI+KIRRCHPKS+LLIRIKPSDDG ARC
Sbjct: 121 DRIVFANPCKPESHIEFAATVGVNLTTFDSVDEIQKIRRCHPKSALLIRIKPSDDGSARC 180

Query: 181 PLGNKYGALPEEIIPLLEAAKSAELPVVGVSFHIGSGATETGAYSAAISAAREVFETAVR 240
           PLGNKYGALPEEIIPLL+AAKSAEL VVGVSFHIGSGATET AYSAAI+AAR VFETAVR
Sbjct: 181 PLGNKYGALPEEIIPLLQAAKSAELAVVGVSFHIGSGATETRAYSAAIAAARGVFETAVR 240

Query: 241 LGLPPMNVLNIGGGFTAGPQFEEAAVTVNSALEEYFPAEMSITLMAEPGRFFAESAFTLA 300
           LGLPPMNVLNIGGGFTAGPQFEEAAV V SA++EYFP +++I LMAEPGRFFAESAFTLA
Sbjct: 241 LGLPPMNVLNIGGGFTAGPQFEEAAVAVKSAIKEYFPEDLNIALMAEPGRFFAESAFTLA 300

Query: 301 VSIIGKRVRGDLREYWINDGIYGSMNCILYDHATVTCRPLALKSNRKNPTCGGGKMYCAT 360
           V IIGKRVRGDLREYWINDGIYGSMNCILYDHAT++CR LA+KSN +NPTCGGG+M+ +T
Sbjct: 301 VHIIGKRVRGDLREYWINDGIYGSMNCILYDHATLSCRALAVKSNMENPTCGGGRMHRST 360

Query: 361 VFGPTCDALDTVLTGQQLPELEVGDWLVFPKMGAYTAAAGSNFNGFNTAAIETYVGYSEQ 420
           VFGPTCDALDTVLTG+QLPELEVGDWLVFPKMGAYTAAAGSNFNGFNTAAIETY+ YSEQ
Sbjct: 361 VFGPTCDALDTVLTGKQLPELEVGDWLVFPKMGAYTAAAGSNFNGFNTAAIETYIVYSEQ 420

Query: 421 GNGAVLD 428
           GNGAV +
Sbjct: 421 GNGAVFE 427

[Close]

BLAST of HG10004747 vs. ExPASy TrEMBL
Match: A0A1S3BD90 (ornithine decarboxylase-like OS=Cucumis melo OX=3656 GN=LOC103488379 PE=3 SV=1)

HSP 1 Score: 769.2 bits (1985), Expect = 8.8e-219
Identity = 376/427 (88.06%), Postives = 400/427 (93.68%), Query Frame = 0


Query: 1   MAVDQLLAIPANPKKKLQLLQNVPGLNPKTITPISQHGLLHFIQSIALKSPDEPFYIFDL 60
           MAVDQLL +PAN KKKL LLQN PGLNPKTITPISQHGLLHF+QSI LK+ D+PFY FDL
Sbjct: 1   MAVDQLLPVPANSKKKLHLLQNAPGLNPKTITPISQHGLLHFLQSIVLKTSDKPFYTFDL 60

Query: 61  AVVATLFDHWSQSLPTVRPFYAVKCNPNPALLAAMAALGSNFDCASRAEIQSVLDLGVSP 120
           AVVATLFD WS SLPTVRPFYAVKCNPNP  LAAMAALGSNFDCASRAEIQSVL LGVSP
Sbjct: 61  AVVATLFDLWSHSLPTVRPFYAVKCNPNPDFLAAMAALGSNFDCASRAEIQSVLALGVSP 120

Query: 121 DRIVFANPCKPESHIEFAAAVGVNLTTFDSVDEIEKIRRCHPKSSLLIRIKPSDDGGARC 180
           DRIVFANPCKPESHIEFAA VGVNLTTFDSVDEI+KIRRCHPKS+LLIRIKPSDDG ARC
Sbjct: 121 DRIVFANPCKPESHIEFAATVGVNLTTFDSVDEIQKIRRCHPKSALLIRIKPSDDGSARC 180

Query: 181 PLGNKYGALPEEIIPLLEAAKSAELPVVGVSFHIGSGATETGAYSAAISAAREVFETAVR 240
           PLGNKYGALPEEIIPLL+AAKSAEL VVGVSFHIGSGATET AYSAAI+AAR VFETAVR
Sbjct: 181 PLGNKYGALPEEIIPLLQAAKSAELAVVGVSFHIGSGATETRAYSAAIAAARGVFETAVR 240

Query: 241 LGLPPMNVLNIGGGFTAGPQFEEAAVTVNSALEEYFPAEMSITLMAEPGRFFAESAFTLA 300
           LGLPPMNVLNIGGGFTAGPQFEEAAV V SA++EYFP +++I LMAEPGRFFAESAFTLA
Sbjct: 241 LGLPPMNVLNIGGGFTAGPQFEEAAVAVKSAIKEYFPEDLNIALMAEPGRFFAESAFTLA 300

Query: 301 VSIIGKRVRGDLREYWINDGIYGSMNCILYDHATVTCRPLALKSNRKNPTCGGGKMYCAT 360
           V IIGKRVRGDLREYWINDGIYGSMNCILYDHAT++CR LA+KSN +NPTCGGG+M+ +T
Sbjct: 301 VHIIGKRVRGDLREYWINDGIYGSMNCILYDHATLSCRALAVKSNMENPTCGGGRMHRST 360

Query: 361 VFGPTCDALDTVLTGQQLPELEVGDWLVFPKMGAYTAAAGSNFNGFNTAAIETYVGYSEQ 420
           VFGPTCDALDTVLTG+QLPELEVGDWLVFPKMGAYTAAAGSNFNGFNTA+IETY+ YSEQ
Sbjct: 361 VFGPTCDALDTVLTGKQLPELEVGDWLVFPKMGAYTAAAGSNFNGFNTASIETYIVYSEQ 420

Query: 421 GNGAVLD 428
           GNGAV +
Sbjct: 421 GNGAVFE 427

[Close]

BLAST of HG10004747 vs. ExPASy TrEMBL
Match: A0A6J1KTC4 (ornithine decarboxylase-like OS=Cucurbita maxima OX=3661 GN=LOC111496226 PE=3 SV=1)

HSP 1 Score: 704.5 bits (1817), Expect = 2.7e-199
Identity = 344/410 (83.90%), Postives = 375/410 (91.46%), Query Frame = 0


Query: 19  LLQNVPGLNPKTITPISQHGLLHFIQSIALKS--PDEPFYIFDLAVVATLFDHWSQSLPT 78
           LLQ  PGL+PK+ITPI QHGLL F+QSIAL S  P+EPFYIFDLA +  L + W+QSLPT
Sbjct: 7   LLQTAPGLSPKSITPIPQHGLLPFLQSIALSSDNPNEPFYIFDLATITALMNLWTQSLPT 66

Query: 79  VRPFYAVKCNPNPALLAAMAALGSNFDCASRAEIQSVLDLGVSPDRIVFANPCKPESHIE 138
           VRPFYAVKCNPNPALLA MAALGSNFDCAS +EIQ+VL LGVSPDRIVFANPCKPESHI+
Sbjct: 67  VRPFYAVKCNPNPALLAVMAALGSNFDCASTSEIQAVLALGVSPDRIVFANPCKPESHIK 126

Query: 139 FAAAVGVNLTTFDSVDEIEKIRRCHPKSSLLIRIKPSDDGGARCPLGNKYGALPEEIIPL 198
           FAA VGVNLTTFDSV EIEKIR CHPKS+LL+RIKP +DGGARC LG KYGALPEEIIPL
Sbjct: 127 FAADVGVNLTTFDSVYEIEKIRSCHPKSALLLRIKPPEDGGARCQLGQKYGALPEEIIPL 186

Query: 199 LEAAKSAELPVVGVSFHIGSGATETGAYSAAISAAREVFETAVRLGLPPMNVLNIGGGFT 258
           LEAAK+A+L VVGVSFHIGSG  ETGAYS+AI+AAR VF+TAVRL LPPMNVLNIGGGFT
Sbjct: 187 LEAAKAADLAVVGVSFHIGSGDAETGAYSSAIAAARGVFDTAVRLALPPMNVLNIGGGFT 246

Query: 259 AGPQFEEAAVTVNSALEEYFPAEMSITLMAEPGRFFAESAFTLAVSIIGKRVRGDLREYW 318
           AGPQFE+AA+T+NSAL+EYFPAE++IT+MAEPGR+FAESAFTLAV++IGKRVRGD REYW
Sbjct: 247 AGPQFEKAALTINSALQEYFPAELNITVMAEPGRYFAESAFTLAVNVIGKRVRGDHREYW 306

Query: 319 INDGIYGSMNCILYDHATVTCRPLALKSNRKNPTCGGGKMYCATVFGPTCDALDTVLTGQ 378
           INDGIYGSMNCILYDHATVTC PLALKSNRKNPTCGG KMY  TVFGPTCD LDTVLTG 
Sbjct: 307 INDGIYGSMNCILYDHATVTCTPLALKSNRKNPTCGGMKMYGTTVFGPTCDGLDTVLTGY 366

Query: 379 QLPELEVGDWLVFPKMGAYTAAAGSNFNGFNTAAIETYVGYSEQGNGAVL 427
            LP+LEVGDWLV+PKMGAYTAAAGSNFNGFNTAAIETY+ YSEQGNGAVL
Sbjct: 367 PLPDLEVGDWLVWPKMGAYTAAAGSNFNGFNTAAIETYIVYSEQGNGAVL 416

[Close]

BLAST of HG10004747 vs. ExPASy TrEMBL
Match: A0A6J1GI92 (ornithine decarboxylase-like OS=Cucurbita moschata OX=3662 GN=LOC111454396 PE=3 SV=1)

HSP 1 Score: 696.8 bits (1797), Expect = 5.6e-197
Identity = 339/410 (82.68%), Postives = 374/410 (91.22%), Query Frame = 0


Query: 19  LLQNVPGLNPKTITPISQHGLLHFIQSIALKS--PDEPFYIFDLAVVATLFDHWSQSLPT 78
           LLQ   GL+PK++TPI QHGLL F+QS+AL S  P+EPFYIFDLA +  L + W+QSLP 
Sbjct: 7   LLQTALGLSPKSVTPIPQHGLLPFLQSLALSSDNPNEPFYIFDLATITALMNLWTQSLPA 66

Query: 79  VRPFYAVKCNPNPALLAAMAALGSNFDCASRAEIQSVLDLGVSPDRIVFANPCKPESHIE 138
           V PFYAVKCNPNPALLAAMAALGSNFDCAS +EIQ++L LGVSPDRIVFANPCKPESHI+
Sbjct: 67  VHPFYAVKCNPNPALLAAMAALGSNFDCASTSEIQAILALGVSPDRIVFANPCKPESHIK 126

Query: 139 FAAAVGVNLTTFDSVDEIEKIRRCHPKSSLLIRIKPSDDGGARCPLGNKYGALPEEIIPL 198
           FAAAVGVNLTTFDSV EIEKIR CHPK++LL+RIKP +DGGARC LG KYGALPEEIIPL
Sbjct: 127 FAAAVGVNLTTFDSVYEIEKIRSCHPKTALLLRIKPPEDGGARCQLGQKYGALPEEIIPL 186

Query: 199 LEAAKSAELPVVGVSFHIGSGATETGAYSAAISAAREVFETAVRLGLPPMNVLNIGGGFT 258
           LEAAK+A+L VVGVSFHIGSG  ETGAYS+AI+AAR VF+TAVRL L PMNVLNIGGGFT
Sbjct: 187 LEAAKAADLAVVGVSFHIGSGDAETGAYSSAIAAARGVFDTAVRLALSPMNVLNIGGGFT 246

Query: 259 AGPQFEEAAVTVNSALEEYFPAEMSITLMAEPGRFFAESAFTLAVSIIGKRVRGDLREYW 318
           AGPQFE+AA+T+NSAL+EYFPAE++IT+MAEPGR+FAESAFTLAV++IGKRVRGD REYW
Sbjct: 247 AGPQFEKAALTINSALKEYFPAELNITVMAEPGRYFAESAFTLAVNVIGKRVRGDHREYW 306

Query: 319 INDGIYGSMNCILYDHATVTCRPLALKSNRKNPTCGGGKMYCATVFGPTCDALDTVLTGQ 378
           INDGIYGSMNCILYDHATVTC PLALKSNRKNPTCGG KMY  TVFGPTCD LDTVLTG 
Sbjct: 307 INDGIYGSMNCILYDHATVTCTPLALKSNRKNPTCGGMKMYGTTVFGPTCDGLDTVLTGY 366

Query: 379 QLPELEVGDWLVFPKMGAYTAAAGSNFNGFNTAAIETYVGYSEQGNGAVL 427
           QLP+LEVGDWLV+PKMGAYTAAAGSNFNGFNTAAIETY+ YSEQGNGAVL
Sbjct: 367 QLPDLEVGDWLVWPKMGAYTAAAGSNFNGFNTAAIETYIVYSEQGNGAVL 416

[Close]

BLAST of HG10004747 vs. ExPASy TrEMBL
Match: A0A6J1CQX6 (ornithine decarboxylase-like OS=Momordica charantia OX=3673 GN=LOC111013933 PE=3 SV=1)

HSP 1 Score: 667.9 bits (1722), Expect = 2.8e-188
Identity = 326/421 (77.43%), Postives = 366/421 (86.94%), Query Frame = 0


Query: 1   MAVDQLLAIPANPKKKLQLLQNVPGLNPKTITPISQHGLLHFIQSIALKS--PDEPFYIF 60
           MAVD LL   A   KKL LLQ  PGL  K IT IS+ G++ F+QSIAL +   D+PFY+F
Sbjct: 1   MAVDHLLRAIAADPKKLHLLQIAPGLRGKAITTISEDGMIQFLQSIALNNQHSDDPFYVF 60

Query: 61  DLAVVATLFDHWSQSLPTVRPFYAVKCNPNPALLAAMAALGSNFDCASRAEIQSVLDLGV 120
           DLAV+  L D W++SLP VRPFYAVKCNP+PALL AMAALGSNFDCASR EI++VL  GV
Sbjct: 61  DLAVLVGLMDRWTRSLPAVRPFYAVKCNPDPALLGAMAALGSNFDCASRXEIEAVLAFGV 120

Query: 121 SPDRIVFANPCKPESHIEFAAAVGVNLTTFDSVDEIEKIRRCHPKSSLLIRIKPSDDGGA 180
           SPDRIVFANPCK ESHI+FAA+VGVNLTTFDS++E+EKIRRCHPKS+LLIRIK  DDGGA
Sbjct: 121 SPDRIVFANPCKAESHIKFAASVGVNLTTFDSIEEVEKIRRCHPKSALLIRIKSPDDGGA 180

Query: 181 RCPLGNKYGALPEEIIPLLEAAKSAELPVVGVSFHIGSGATETGAYSAAISAAREVFETA 240
           RCPLG KYGALPEEI PLL+AAK A+L V GVSFHIGSGATE GAY AAI+AAR VF+TA
Sbjct: 181 RCPLGPKYGALPEEITPLLQAAKDADLAVAGVSFHIGSGATEAGAYRAAIAAARGVFDTA 240

Query: 241 VRLGLPPMNVLNIGGGFTAGPQFEEAAVTVNSALEEYFPAEMSITLMAEPGRFFAESAFT 300
           V+LGLPPMNVLNIGGGFTAGPQFEEAA TV SA+ +YFPAE+  T MAEPGRFFAESAFT
Sbjct: 241 VQLGLPPMNVLNIGGGFTAGPQFEEAAATVKSAMGKYFPAEVKFTAMAEPGRFFAESAFT 300

Query: 301 LAVSIIGKRVRGDLREYWINDGIYGSMNCILYDHATVTCRPLALKSNRKNPTCGGGKMYC 360
           LA +IIGKRVRG++REYWINDGIYGSMNC+LYDHATVTC P+A KS+RKNPTCGG + Y 
Sbjct: 301 LAANIIGKRVRGEVREYWINDGIYGSMNCLLYDHATVTCTPMACKSSRKNPTCGGARKYG 360

Query: 361 ATVFGPTCDALDTVLTGQQLPELEVGDWLVFPKMGAYTAAAGSNFNGFNTAAIETYVGYS 420
           ATVFGPTCDALDTVLTG QLPELEVGDWLVFP MGAYTAAAGS+FNGF+TAAI+TY+ +S
Sbjct: 361 ATVFGPTCDALDTVLTGHQLPELEVGDWLVFPNMGAYTAAAGSSFNGFSTAAIKTYLVHS 420

[Close]

BLAST of HG10004747 vs. TAIR 10
Match: AT4G34710.1 (arginine decarboxylase 2 )

HSP 1 Score: 54.3 bits (129), Expect = 2.8e-07
Identity = 63/245 (25.71%), Postives = 106/245 (43.27%), Query Frame = 0


Query: 58  FDLAVVATLFDHWSQSLPTVRPFYAVKCNPNPALLAAMAALGSNF----DCASRAEI--- 117
           FD A+ +  +D   Q +      Y VKCN +  ++  +   GS+F    +  S+ EI   
Sbjct: 127 FDYAIKSQGYDSHYQGV------YPVKCNQDRFVVEDIVKFGSSFRFGLEAGSKPEILLA 186

Query: 118 QSVLDLGVSPDRIVFANPCKPESHIEFA---AAVGVNLT-------TFDSVDEIEKIRRC 177
            S L  G SPD  +  N  K   +I  A     + +N           D V E+ +    
Sbjct: 187 MSCLCKG-SPDAFLVCNGFKDAEYISLALLGRKLALNTVIVLEQEEELDLVIELSQKMNV 246

Query: 178 HPKSSLLIRIKPSDDG--GARCPLGNKYGALPEEIIPLLEAAKSAEL--PVVGVSFHIGS 237
            P   L  +++    G  G+      K+G    +I+ ++   + + +   +  + FHIGS
Sbjct: 247 RPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTTQIVRVVRKLRQSGMLDCLQLLHFHIGS 306

Query: 238 GATETGAYSAAISAAREVFETAVRLGLPPMNVLNIGGGFTA---GPQFEEAAVTVNSALE 279
               T   S  ++ A +++   VRLG   M V++IGGG      G +  E+ ++V  +LE
Sbjct: 307 QIPSTSLLSDGVAEAAQLYCELVRLG-AHMKVIDIGGGLGIDYDGSKSGESDLSVAYSLE 363

[Close]

BLAST of HG10004747 vs. TAIR 10
Match: AT4G34710.2 (arginine decarboxylase 2 )

HSP 1 Score: 54.3 bits (129), Expect = 2.8e-07
Identity = 63/245 (25.71%), Postives = 106/245 (43.27%), Query Frame = 0


Query: 58  FDLAVVATLFDHWSQSLPTVRPFYAVKCNPNPALLAAMAALGSNF----DCASRAEI--- 117
           FD A+ +  +D   Q +      Y VKCN +  ++  +   GS+F    +  S+ EI   
Sbjct: 127 FDYAIKSQGYDSHYQGV------YPVKCNQDRFVVEDIVKFGSSFRFGLEAGSKPEILLA 186

Query: 118 QSVLDLGVSPDRIVFANPCKPESHIEFA---AAVGVNLT-------TFDSVDEIEKIRRC 177
            S L  G SPD  +  N  K   +I  A     + +N           D V E+ +    
Sbjct: 187 MSCLCKG-SPDAFLVCNGFKDAEYISLALLGRKLALNTVIVLEQEEELDLVIELSQKMNV 246

Query: 178 HPKSSLLIRIKPSDDG--GARCPLGNKYGALPEEIIPLLEAAKSAEL--PVVGVSFHIGS 237
            P   L  +++    G  G+      K+G    +I+ ++   + + +   +  + FHIGS
Sbjct: 247 RPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTTQIVRVVRKLRQSGMLDCLQLLHFHIGS 306

Query: 238 GATETGAYSAAISAAREVFETAVRLGLPPMNVLNIGGGFTA---GPQFEEAAVTVNSALE 279
               T   S  ++ A +++   VRLG   M V++IGGG      G +  E+ ++V  +LE
Sbjct: 307 QIPSTSLLSDGVAEAAQLYCELVRLG-AHMKVIDIGGGLGIDYDGSKSGESDLSVAYSLE 363

[Close]

BLAST of HG10004747 vs. TAIR 10
Match: AT2G16500.1 (arginine decarboxylase 1 )

HSP 1 Score: 50.1 bits (118), Expect = 5.3e-06
Identity = 61/247 (24.70%), Postives = 107/247 (43.32%), Query Frame = 0


Query: 58  FDLAVVATLFDHWSQSLPTVRPFYAVKCNPNPALLAAMAALGSNF----DCASRAEI--- 117
           FD A+ +  +D   Q +      Y VKCN +  ++  +   GS F    +  S+ EI   
Sbjct: 116 FDYAIQSQGYDSHYQGV------YPVKCNQDRFIIEDIVEFGSGFRFGLEAGSKPEILLA 175

Query: 118 QSVLDLGVSPDRIVFANPCKPESHIE---FAAAVGVNLT-------TFDSVDEIEKIRRC 177
            S L  G +P+  +  N  K   +I    F   + +N           D V ++ +    
Sbjct: 176 MSCLCKG-NPEAFLVCNGFKDSEYISLALFGRKLELNTVIVLEQEEELDLVIDLSQKMNV 235

Query: 178 HPKSSLLIRIKPSDDG--GARCPLGNKYGALPEEIIPLLEAAKSAELPVVG----VSFHI 237
            P   L  +++    G  G+      K+G    +I+ ++   K +++ ++     + FHI
Sbjct: 236 RPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTVQILRVVR--KLSQVGMLDCLQLLHFHI 295

Query: 238 GSGATETGAYSAAISAAREVFETAVRLGLPPMNVLNIGGGFTA---GPQFEEAAVTVNSA 279
           GS    T   S  ++ A +++   VRLG   M V++IGGG      G +  E+ ++V  +
Sbjct: 296 GSQIPSTALLSDGVAEAAQLYCELVRLG-AHMKVIDIGGGLGIDYDGSKSGESDLSVAYS 352

The following BLAST results are available for this feature:

BLAST of HG10004747 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885888.1	2.4e-234	94.60	ornithine decarboxylase-like [Benincasa hispida]	[more]
KAA0064856.1	8.2e-219	88.29	ornithine decarboxylase-like [Cucumis melo var. makuwa]	[more]
XP_008445311.1	1.8e-218	88.06	PREDICTED: ornithine decarboxylase-like [Cucumis melo]	[more]
XP_023002363.1	5.5e-199	83.90	ornithine decarboxylase-like [Cucurbita maxima]	[more]
XP_023538083.1	5.5e-199	83.90	ornithine decarboxylase-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10004747 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P50134	4.4e-151	65.14	Ornithine decarboxylase OS=Datura stramonium OX=4076 PE=2 SV=1	[more]
O22616	9.3e-149	64.12	Ornithine decarboxylase OS=Solanum lycopersicum OX=4081 GN=ODC PE=2 SV=2	[more]
Q8S3N2	3.5e-148	63.22	Ornithine decarboxylase OS=Capsicum annuum OX=4072 GN=ODC PE=2 SV=1	[more]
P07805	3.2e-93	45.36	Ornithine decarboxylase OS=Trypanosoma brucei brucei OX=5702 PE=1 SV=2	[more]
P27118	3.7e-89	45.22	Ornithine decarboxylase (Fragment) OS=Gallus gallus OX=9031 GN=ODC1 PE=2 SV=1	[more]

BLAST of HG10004747 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VEV5	4.0e-219	88.29	Ornithine decarboxylase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A1S3BD90	8.8e-219	88.06	ornithine decarboxylase-like OS=Cucumis melo OX=3656 GN=LOC103488379 PE=3 SV=1	[more]
A0A6J1KTC4	2.7e-199	83.90	ornithine decarboxylase-like OS=Cucurbita maxima OX=3661 GN=LOC111496226 PE=3 SV...	[more]
A0A6J1GI92	5.6e-197	82.68	ornithine decarboxylase-like OS=Cucurbita moschata OX=3662 GN=LOC111454396 PE=3 ...	[more]
A0A6J1CQX6	2.8e-188	77.43	ornithine decarboxylase-like OS=Momordica charantia OX=3673 GN=LOC111013933 PE=3...	[more]

BLAST of HG10004747 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34710.1	2.8e-07	25.71	arginine decarboxylase 2	[more]
AT4G34710.2	2.8e-07	25.71	arginine decarboxylase 2	[more]
AT2G16500.1	5.3e-06	24.70	arginine decarboxylase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002433	Ornithine decarboxylase	PRINTS	PR01182	ORNDCRBXLASE	coord: 319..332 score: 71.67 coord: 53..77 score: 31.2 coord: 360..370 score: 69.39 coord: 380..393 score: 59.76 coord: 79..106 score: 61.67 coord: 123..147 score: 54.8 coord: 153..175 score: 44.2
IPR002433	Ornithine decarboxylase	PANTHER	PTHR11482	ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE	coord: 31..418
IPR000183	Ornithine/DAP/Arg decarboxylase	PRINTS	PR01179	ODADCRBXLASE	coord: 81..99 score: 44.49 coord: 204..217 score: 53.57 coord: 393..406 score: 57.14 coord: 101..113 score: 45.31 coord: 284..303 score: 42.81
IPR022644	Orn/DAP/Arg decarboxylase 2, N-terminal	PFAM	PF02784	Orn_Arg_deC_N	coord: 63..293 e-value: 8.1E-69 score: 231.7
IPR009006	Alanine racemase/group IV decarboxylase, C-terminal	GENE3D	2.40.37.10	Lyase, Ornithine Decarboxylase; Chain A, domain 1	coord: 52..413 e-value: 6.5E-132 score: 441.8
IPR009006	Alanine racemase/group IV decarboxylase, C-terminal	SUPERFAMILY	50621	Alanine racemase C-terminal domain-like	coord: 277..410
IPR029066	PLP-binding barrel	GENE3D	3.20.20.10	Alanine racemase	coord: 63..292 e-value: 6.5E-132 score: 441.8
IPR029066	PLP-binding barrel	SUPERFAMILY	51419	PLP-binding barrel	coord: 59..295
IPR022643	Orn/DAP/Arg decarboxylase 2, C-terminal	PFAM	PF00278	Orn_DAP_Arg_deC	coord: 294..393 e-value: 7.9E-18 score: 64.9
None	No IPR available	PANTHER	PTHR11482:SF61	ORNITHINE DECARBOXYLASE-LIKE	coord: 31..418
None	No IPR available	CDD	cd00622	PLPDE_III_ODC	coord: 52..414 e-value: 1.34066E-176 score: 495.476
IPR022657	Orn/DAP/Arg decarboxylase 2, conserved site	PROSITE	PS00879	ODR_DC_2_2	coord: 242..256
IPR022653	Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site	PROSITE	PS00878	ODR_DC_2_1	coord: 81..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10004747.1	HG10004747.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0033387	putrescine biosynthetic process from ornithine
biological_process	GO:0006596	polyamine biosynthetic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004586	ornithine decarboxylase activity
molecular_function	GO:0003824	catalytic activity