HG10004710 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10004710
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	zinc finger protein 3-like
Location	Chr08: 19678295 .. 19678941 (-)
RNA-Seq Expression	HG10004710
Synteny	HG10004710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTCCTCAACCTCTCCACCTCCAAAAACGCCGTCGCATAATCAGGAAGAAAACGACGACGAATTAGAGGAAAACCACCACCATCTCCGCCGTGGGATACCGACGGAGGAGCTGAATCTCATGGAAGGCTTGAAAATGGGTTCATCGGAGCCGAGGGTATTTTCGTGTAATTTTTGTCAAAGGAAATTTTATAGCTCACAAGCACTTGGAGGGCATCAAAATGCTCATAAAAGAGAGAGAACGTTGGCTAAAAGAGGCGGTCAACGCTTTCCGGCATTCGGTGGCTACCACCACTATGCGGCGGCGCCGTCTTTTCCACTTCCCGGTGGTCCCAACAACAGATCGCTTGGAATTCAAGTTCACGCGATGGTACATAAACCGCTCACCACGCGCCGGTTTCTTCCTCTTCGAGGTTTGGAATCCTCTACGGCCGTTCTTACGGTTGGTCTAGAACGCCCATCCATCAACAGCCCGGTATTGGGAAGCTACCGTTGATGAACGCTGGCCATGCGATTAATCATACCACTGGATTTCCGCCACGTGGCTGCAACTCCGTCGGTAGATTCGACTTTGACGTCGTCCGATCAACGGCGGCGACTGCCGACGACACCCACAAAGTACTCGACTTGTCTCTCAAGCTGTAA

mRNA sequence

ATGGAGTCCTCAACCTCTCCACCTCCAAAAACGCCGTCGCATAATCAGGAAGAAAACGACGACGAATTAGAGGAAAACCACCACCATCTCCGCCGTGGGATACCGACGGAGGAGCTGAATCTCATGGAAGGCTTGAAAATGGGTTCATCGGAGCCGAGGGTATTTTCGTGTAATTTTTGTCAAAGGAAATTTTATAGCTCACAAGCACTTGGAGGGCATCAAAATGCTCATAAAAGAGAGAGAACGTTGGCTAAAAGAGGCGGTCAACGCTTTCCGGCATTCGGTGGCTACCACCACTATGCGGCGGCGCCGTCTTTTCCACTTCCCGGTGGTCCCAACAACAGATCGCTTGGAATTCAAGTTCACGCGATGGTACATAAACCGCTCACCACGCGCCGGTTTCTTCCTCTTCGAGGTTTGGAATCCTCTACGGCCGTTCTTACGCCCGGTATTGGGAAGCTACCGTTGATGAACGCTGGCCATGCGATTAATCATACCACTGGATTTCCGCCACGTGGCTGCAACTCCGTCGGTAGATTCGACTTTGACGTCGTCCGATCAACGGCGGCGACTGCCGACGACACCCACAAAGTACTCGACTTGTCTCTCAAGCTGTAA

Coding sequence (CDS)

ATGGAGTCCTCAACCTCTCCACCTCCAAAAACGCCGTCGCATAATCAGGAAGAAAACGACGACGAATTAGAGGAAAACCACCACCATCTCCGCCGTGGGATACCGACGGAGGAGCTGAATCTCATGGAAGGCTTGAAAATGGGTTCATCGGAGCCGAGGGTATTTTCGTGTAATTTTTGTCAAAGGAAATTTTATAGCTCACAAGCACTTGGAGGGCATCAAAATGCTCATAAAAGAGAGAGAACGTTGGCTAAAAGAGGCGGTCAACGCTTTCCGGCATTCGGTGGCTACCACCACTATGCGGCGGCGCCGTCTTTTCCACTTCCCGGTGGTCCCAACAACAGATCGCTTGGAATTCAAGTTCACGCGATGGTACATAAACCGCTCACCACGCGCCGGTTTCTTCCTCTTCGAGGTTTGGAATCCTCTACGGCCGTTCTTACGCCCGGTATTGGGAAGCTACCGTTGATGAACGCTGGCCATGCGATTAATCATACCACTGGATTTCCGCCACGTGGCTGCAACTCCGTCGGTAGATTCGACTTTGACGTCGTCCGATCAACGGCGGCGACTGCCGACGACACCCACAAAGTACTCGACTTGTCTCTCAAGCTGTAA

Protein sequence

MESSTSPPPKTPSHNQEENDDELEENHHHLRRGIPTEELNLMEGLKMGSSEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHYAAAPSFPLPGGPNNRSLGIQVHAMVHKPLTTRRFLPLRGLESSTAVLTPGIGKLPLMNAGHAINHTTGFPPRGCNSVGRFDFDVVRSTAATADDTHKVLDLSLKL

Homology

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BLAST of HG10004710 vs. NCBI nr
Match: XP_038886144.1 (zinc finger protein 3-like [Benincasa hispida])

HSP 1 Score: 345.1 bits (884), Expect = 4.1e-91
Identity = 180/217 (82.95%), Postives = 186/217 (85.71%), Query Frame = 0


Query: 1   MESSTSPPPKT-PSHNQEENDDELEENHHHLRRGIPTEELNLMEGLKMGSSEPRVFSCNF 60
           MESSTSPPPKT PSHNQE+NDDELEENHHHLR GIP EELNL+EGLKMGSSEPRVFSCNF
Sbjct: 1   MESSTSPPPKTPPSHNQEQNDDELEENHHHLRLGIPAEELNLIEGLKMGSSEPRVFSCNF 60

Query: 61  CQRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHYAAAPSFPLPGGP-NNRSLG 120
           CQRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHYAAAPSFP PGGP NNRSLG
Sbjct: 61  CQRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHYAAAPSFPHPGGPNNNRSLG 120

Query: 121 IQVHAMVHKP------LTTRRFLPL----RGLESSTAVLTPGIGKLPLMNAGHAINHTTG 180
           IQVHAMVHKP       ++ R+  L     G   +     PGIGKL LMNAGHAINHT G
Sbjct: 121 IQVHAMVHKPSHHAPVSSSSRYGILYDRSYGWSRTPIHQQPGIGKLHLMNAGHAINHTDG 180

Query: 181 FPPRGCNSVGRFDFDVVRSTAATADDTHKVLDLSLKL 206
           FPPRGCNSVGRFDFDVVRSTAA ADDTHKVLDLSLKL
Sbjct: 181 FPPRGCNSVGRFDFDVVRSTAAAADDTHKVLDLSLKL 217

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BLAST of HG10004710 vs. NCBI nr
Match: XP_011649844.1 (zinc finger protein 3 [Cucumis sativus] >KGN62985.1 hypothetical protein Csa_021975 [Cucumis sativus])

HSP 1 Score: 332.4 bits (851), Expect = 2.7e-87
Identity = 175/224 (78.12%), Postives = 184/224 (82.14%), Query Frame = 0


Query: 1   MESSTSPPPKTPSHNQEENDDELEENHHHLRRGIPTEELNLMEGLKMGSSEPRVFSCNFC 60
           MESST+PPPKT S+NQE+NDDELE+NHHHLRR IP EELNL+EGLKMGSSEPRVFSCNFC
Sbjct: 1   MESSTAPPPKTASYNQEQNDDELEDNHHHLRREIPAEELNLIEGLKMGSSEPRVFSCNFC 60

Query: 61  QRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHYAA--APSFPLPGGP-----N 120
           QRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFG YHHYAA  APSFPLPG P     N
Sbjct: 61  QRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGAYHHYAAAVAPSFPLPGSPNNNNNN 120

Query: 121 NRSLGIQVHAMVHKP------LTTRRF-----LPLRGLESSTAV-LTPGIGKLPLMNAGH 180
           NRSLGIQVHAMVHKP       +  RF         G  S T +   PG+GKLPLMNAGH
Sbjct: 121 NRSLGIQVHAMVHKPSHHPPASSNSRFGVHYGRSYGGGWSRTPIHQQPGVGKLPLMNAGH 180

Query: 181 AINHTTGFPPRGCNSVGRFDFDVVRSTAATADDTHKVLDLSLKL 206
            INHTTGFPPRGC+SVGRFDFDVVRST A ADDTHKVLDLSLKL
Sbjct: 181 PINHTTGFPPRGCSSVGRFDFDVVRSTTAAADDTHKVLDLSLKL 224

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BLAST of HG10004710 vs. NCBI nr
Match: XP_008445256.1 (PREDICTED: zinc finger protein 3-like [Cucumis melo] >KAA0064895.1 zinc finger protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 319.3 bits (817), Expect = 2.4e-83
Identity = 172/223 (77.13%), Postives = 182/223 (81.61%), Query Frame = 0


Query: 1   MESSTSPPPKTPSHNQEENDDELEENHHHLRRGIPTEELNLMEGLKMGSSEPRVFSCNFC 60
           MESST+  PKT S+NQE+ND +LE+NHHHLRR IP EELNL+EGLKM SSEPRVFSCNFC
Sbjct: 1   MESSTA--PKTASYNQEQNDGDLEDNHHHLRREIPAEELNLIEGLKMASSEPRVFSCNFC 60

Query: 61  QRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHY---AAAPSFPLPGGP----N 120
           QRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHY   AAAPSF LPGGP    N
Sbjct: 61  QRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHYAAVAAAPSFLLPGGPNNNNN 120

Query: 121 NRSLGIQVHAMVHKP------LTTRRFLPLRGLE----SSTAV-LTPGIGKLPLMNAGHA 180
           NRSLGIQVHAMVHKP       +  RF    G      S T +   PG+GKLPLMNAGH 
Sbjct: 121 NRSLGIQVHAMVHKPSHHPPVSSNSRFGVHYGRSDGGWSRTPIHQQPGVGKLPLMNAGHP 180

Query: 181 INHTTGFPPRGCNSVGRFDFDVVRSTAATADDTHKVLDLSLKL 206
           INHTTGFPPRGC+SVGRFDFDVVRSTAA ADDTHKVLDLSLKL
Sbjct: 181 INHTTGFPPRGCSSVGRFDFDVVRSTAAAADDTHKVLDLSLKL 221

[Close]

BLAST of HG10004710 vs. NCBI nr
Match: XP_023546670.1 (zinc finger protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 236.9 bits (603), Expect = 1.6e-58
Identity = 134/220 (60.91%), Postives = 152/220 (69.09%), Query Frame = 0


Query: 1   MESSTS-PPPKTPSHNQEENDDEL-----EENHHHLRRGIPTEELNLMEGLKMGSSEPRV 60
           MESST+  PPK PS N E++DDEL     ++NHH+LRRG+P EELNL++GLKMG  EPRV
Sbjct: 1   MESSTTETPPKPPSQNHEQHDDELQKGFADDNHHYLRRGVPAEELNLIDGLKMGLPEPRV 60

Query: 61  FSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHYAAAPSFPLPGGPNN 120
           FSCNFC+RKFYSSQALGGHQNAHKRER LAKRGGQR PAFGGYHHYA+A  F        
Sbjct: 61  FSCNFCRRKFYSSQALGGHQNAHKRERALAKRGGQRLPAFGGYHHYASAAPF-------- 120

Query: 121 RSLGIQVHAMVHK-PLTTRRFLPLRGLESSTAVLTPGIGKLPLMNAGHAINHTTGFPPRG 180
           RS+GIQVHAMVHK P     F  L G   +     P +GKLP+MNAGHAINHT+      
Sbjct: 121 RSIGIQVHAMVHKPPHHAPAFGILYGWSRTPIHQRPDVGKLPVMNAGHAINHTS------ 180

Query: 181 CNSVGRFDFDVVRSTAA--------TADDTHKVLDLSLKL 206
               GR DFDV RSTA           ++ HK LDLSLKL
Sbjct: 181 ----GRMDFDVERSTAGGGVGLKNKQEEERHKALDLSLKL 202

[Close]

BLAST of HG10004710 vs. NCBI nr
Match: XP_022996822.1 (zinc finger protein 3-like [Cucurbita maxima])

HSP 1 Score: 230.3 bits (586), Expect = 1.5e-56
Identity = 134/223 (60.09%), Postives = 154/223 (69.06%), Query Frame = 0


Query: 1   MESSTS-PPPKTPSHNQEENDDEL-------EENHHHLRRGIPTEELNLMEGLKMGSSEP 60
           MESST+  PPK PS NQE++DDEL       ++NHHHLR G+P EELNL++GLKMG  E 
Sbjct: 1   MESSTTETPPKPPSQNQEQHDDELQKGFAEEDDNHHHLRGGVPAEELNLIDGLKMGLPER 60

Query: 61  RVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHYA-AAPSFPLPGG 120
           R+FSCNFC+RKFYSSQALGGHQNAHKRERTLAKRGGQR PAFGGYHHYA AAPS      
Sbjct: 61  RLFSCNFCRRKFYSSQALGGHQNAHKRERTLAKRGGQRPPAFGGYHHYASAAPS------ 120

Query: 121 PNNRSLGIQVHAMVHK-PLTTRRFLPLRGLESSTAVLTPGIGKLPLMNAGHAINHTTGFP 180
              RS+GIQVHAMVHK P     F  + G   +     PG+GKLP+MNAGHAINHT+   
Sbjct: 121 ---RSIGIQVHAMVHKPPHHAPAFGIIYGWSRTPIHQQPGVGKLPVMNAGHAINHTS--- 180

Query: 181 PRGCNSVGRFDFDVVRSTAA--------TADDTHKVLDLSLKL 206
                   R +FDV RSTA           ++ HKV+DLSLKL
Sbjct: 181 -------SRMNFDVERSTAGGGVGLNNKQEEERHKVVDLSLKL 204

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BLAST of HG10004710 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 9.3e-22
Identity = 73/167 (43.71%), Postives = 90/167 (53.89%), Query Frame = 0


Query: 16  QEENDDELEENHHHLRRGIPT-EELNLMEGLKMGSS-------------EPRVFSCNFCQ 75
           +++   +LE     L RG  T  ELNL++  K  SS             +PRVFSCN+CQ
Sbjct: 15  KKQGHQDLELGLTLLSRGTATSSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQ 74

Query: 76  RKFYSSQALGGHQNAHKRERTLAKRGG------QRFPA------FGGYHHYAAAPSFPLP 135
           RKFYSSQALGGHQNAHKRERTLAKRG          P+       G    +A+  S PL 
Sbjct: 75  RKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLH 134

Query: 136 GGPNNRS-LGIQVHAMVHKP-LTTRRFLPLRGLESSTAVLTPGIGKL 155
           G  NNRS LGIQ H+ +HKP    R+   L  +   +    P IGK+
Sbjct: 135 GSVNNRSTLGIQAHSTIHKPSFLGRQTTSLSHVFKQSIHQKPTIGKM 181

[Close]

BLAST of HG10004710 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 9.6e-19
Identity = 67/169 (39.64%), Postives = 90/169 (53.25%), Query Frame = 0


Query: 3   SSTSPPPKTPSHNQEENDDE--LEENHHHLRRGIPTEELNLMEGLKMGSSEPRVFSCNFC 62
           SS++  P   S NQ   D+E  +  + H L      ++   +      S+E ++FSCN+C
Sbjct: 7   SSSTAFPYQDSLNQSIEDEERDVHNSSHELNLIDCIDDTTSIVNESTTSTEQKLFSCNYC 66

Query: 63  QRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHYAAAPSFPLPGGPNN-RSLGI 122
           QR FYSSQALGGHQNAHKRERTLAKRG +   +   + H       P  G  NN RSLGI
Sbjct: 67  QRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGI 126

Query: 123 QVHAMVHKPLTTRRFLPLRGLESSTAV---LTPGIGKLPLMNAGHAINH 166
           Q H++ HK  +   F    G  + + +     P IGK P M+  H  +H
Sbjct: 127 QAHSISHKLSSYNGFGGHYGQINWSRLPFDQQPAIGKFPSMDNFHHHHH 175

[Close]

BLAST of HG10004710 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 2.0e-16
Identity = 60/137 (43.80%), Postives = 75/137 (54.74%), Query Frame = 0


Query: 14  HNQEENDDELEENHHHLRRGIPTEELN-LMEGLKMGSSEPRVFSCNFCQRKFYSSQALGG 73
           +N   N+ +LE +   L     +E  N   +  +  S   RVFSCN+CQRKFYSSQALGG
Sbjct: 43  NNNNNNNLDLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGG 102

Query: 74  HQNAHKRERTLAKRGGQR-----FPAFGGYHHYAAAPS------FPLPGGPNN-----RS 133
           HQNAHKRERTLAKR  +      FP  G   +YAAA +       PL G  N      R+
Sbjct: 103 HQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLPLHGSGNGNMTSFRT 162

[Close]

BLAST of HG10004710 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-14
Identity = 43/82 (52.44%), Postives = 54/82 (65.85%), Query Frame = 0


Query: 50  SEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHYAAAPSFPLP 109
           + PRVFSCN+C+RKFYSSQALGGHQNAHKRERT+AKR       FG +H          P
Sbjct: 54  ANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHR---------P 113

Query: 110 GGPNNRSLGIQVHA-MVHKPLT 131
               + SLG+Q H+ ++H  L+
Sbjct: 114 YTYTSSSLGMQAHSGLLHHTLS 126

[Close]

BLAST of HG10004710 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.3e-12
Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = 0


Query: 51 EPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRF 92
          +PRVFSCN+CQRKFYSSQALGGHQNAHK ERTLAK+  + F
Sbjct: 48 QPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELF 88

[Close]

BLAST of HG10004710 vs. ExPASy TrEMBL
Match: A0A0A0LM45 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G382580 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.3e-87
Identity = 175/224 (78.12%), Postives = 184/224 (82.14%), Query Frame = 0


Query: 1   MESSTSPPPKTPSHNQEENDDELEENHHHLRRGIPTEELNLMEGLKMGSSEPRVFSCNFC 60
           MESST+PPPKT S+NQE+NDDELE+NHHHLRR IP EELNL+EGLKMGSSEPRVFSCNFC
Sbjct: 1   MESSTAPPPKTASYNQEQNDDELEDNHHHLRREIPAEELNLIEGLKMGSSEPRVFSCNFC 60

Query: 61  QRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHYAA--APSFPLPGGP-----N 120
           QRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFG YHHYAA  APSFPLPG P     N
Sbjct: 61  QRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGAYHHYAAAVAPSFPLPGSPNNNNNN 120

Query: 121 NRSLGIQVHAMVHKP------LTTRRF-----LPLRGLESSTAV-LTPGIGKLPLMNAGH 180
           NRSLGIQVHAMVHKP       +  RF         G  S T +   PG+GKLPLMNAGH
Sbjct: 121 NRSLGIQVHAMVHKPSHHPPASSNSRFGVHYGRSYGGGWSRTPIHQQPGVGKLPLMNAGH 180

Query: 181 AINHTTGFPPRGCNSVGRFDFDVVRSTAATADDTHKVLDLSLKL 206
            INHTTGFPPRGC+SVGRFDFDVVRST A ADDTHKVLDLSLKL
Sbjct: 181 PINHTTGFPPRGCSSVGRFDFDVVRSTTAAADDTHKVLDLSLKL 224

[Close]

BLAST of HG10004710 vs. ExPASy TrEMBL
Match: A0A5A7VG79 (Zinc finger protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002100 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.2e-83
Identity = 172/223 (77.13%), Postives = 182/223 (81.61%), Query Frame = 0


Query: 1   MESSTSPPPKTPSHNQEENDDELEENHHHLRRGIPTEELNLMEGLKMGSSEPRVFSCNFC 60
           MESST+  PKT S+NQE+ND +LE+NHHHLRR IP EELNL+EGLKM SSEPRVFSCNFC
Sbjct: 1   MESSTA--PKTASYNQEQNDGDLEDNHHHLRREIPAEELNLIEGLKMASSEPRVFSCNFC 60

Query: 61  QRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHY---AAAPSFPLPGGP----N 120
           QRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHY   AAAPSF LPGGP    N
Sbjct: 61  QRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHYAAVAAAPSFLLPGGPNNNNN 120

Query: 121 NRSLGIQVHAMVHKP------LTTRRFLPLRGLE----SSTAV-LTPGIGKLPLMNAGHA 180
           NRSLGIQVHAMVHKP       +  RF    G      S T +   PG+GKLPLMNAGH 
Sbjct: 121 NRSLGIQVHAMVHKPSHHPPVSSNSRFGVHYGRSDGGWSRTPIHQQPGVGKLPLMNAGHP 180

Query: 181 INHTTGFPPRGCNSVGRFDFDVVRSTAATADDTHKVLDLSLKL 206
           INHTTGFPPRGC+SVGRFDFDVVRSTAA ADDTHKVLDLSLKL
Sbjct: 181 INHTTGFPPRGCSSVGRFDFDVVRSTAAAADDTHKVLDLSLKL 221

[Close]

BLAST of HG10004710 vs. ExPASy TrEMBL
Match: A0A1S3BC89 (zinc finger protein 3-like OS=Cucumis melo OX=3656 GN=LOC103488342 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.2e-83
Identity = 172/223 (77.13%), Postives = 182/223 (81.61%), Query Frame = 0


Query: 1   MESSTSPPPKTPSHNQEENDDELEENHHHLRRGIPTEELNLMEGLKMGSSEPRVFSCNFC 60
           MESST+  PKT S+NQE+ND +LE+NHHHLRR IP EELNL+EGLKM SSEPRVFSCNFC
Sbjct: 1   MESSTA--PKTASYNQEQNDGDLEDNHHHLRREIPAEELNLIEGLKMASSEPRVFSCNFC 60

Query: 61  QRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHY---AAAPSFPLPGGP----N 120
           QRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHY   AAAPSF LPGGP    N
Sbjct: 61  QRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHYAAVAAAPSFLLPGGPNNNNN 120

Query: 121 NRSLGIQVHAMVHKP------LTTRRFLPLRGLE----SSTAV-LTPGIGKLPLMNAGHA 180
           NRSLGIQVHAMVHKP       +  RF    G      S T +   PG+GKLPLMNAGH 
Sbjct: 121 NRSLGIQVHAMVHKPSHHPPVSSNSRFGVHYGRSDGGWSRTPIHQQPGVGKLPLMNAGHP 180

Query: 181 INHTTGFPPRGCNSVGRFDFDVVRSTAATADDTHKVLDLSLKL 206
           INHTTGFPPRGC+SVGRFDFDVVRSTAA ADDTHKVLDLSLKL
Sbjct: 181 INHTTGFPPRGCSSVGRFDFDVVRSTAAAADDTHKVLDLSLKL 221

[Close]

BLAST of HG10004710 vs. ExPASy TrEMBL
Match: A0A6J1K332 (zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111491949 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 7.1e-57
Identity = 134/223 (60.09%), Postives = 154/223 (69.06%), Query Frame = 0


Query: 1   MESSTS-PPPKTPSHNQEENDDEL-------EENHHHLRRGIPTEELNLMEGLKMGSSEP 60
           MESST+  PPK PS NQE++DDEL       ++NHHHLR G+P EELNL++GLKMG  E 
Sbjct: 1   MESSTTETPPKPPSQNQEQHDDELQKGFAEEDDNHHHLRGGVPAEELNLIDGLKMGLPER 60

Query: 61  RVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHYA-AAPSFPLPGG 120
           R+FSCNFC+RKFYSSQALGGHQNAHKRERTLAKRGGQR PAFGGYHHYA AAPS      
Sbjct: 61  RLFSCNFCRRKFYSSQALGGHQNAHKRERTLAKRGGQRPPAFGGYHHYASAAPS------ 120

Query: 121 PNNRSLGIQVHAMVHK-PLTTRRFLPLRGLESSTAVLTPGIGKLPLMNAGHAINHTTGFP 180
              RS+GIQVHAMVHK P     F  + G   +     PG+GKLP+MNAGHAINHT+   
Sbjct: 121 ---RSIGIQVHAMVHKPPHHAPAFGIIYGWSRTPIHQQPGVGKLPVMNAGHAINHTS--- 180

Query: 181 PRGCNSVGRFDFDVVRSTAA--------TADDTHKVLDLSLKL 206
                   R +FDV RSTA           ++ HKV+DLSLKL
Sbjct: 181 -------SRMNFDVERSTAGGGVGLNNKQEEERHKVVDLSLKL 204

[Close]

BLAST of HG10004710 vs. ExPASy TrEMBL
Match: A0A6J1GJK2 (zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111454443 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 9.6e-46
Identity = 121/216 (56.02%), Postives = 134/216 (62.04%), Query Frame = 0


Query: 1   MESSTSPPPKTPSHNQEENDDELEENHHHLRRGIPTEELNLMEGLKMGSSEPRVFSCNFC 60
           MESS    P  P    ++   E ++   +LRRGIP EELNL+  LKMGS EPRVFSCNFC
Sbjct: 1   MESSAVDTP--PRLQLQKGFGEEDDGDKYLRRGIPAEELNLIGDLKMGSIEPRVFSCNFC 60

Query: 61  QRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHY---AAAPSFPLPGGPNNRSL 120
           +RKFYSSQALGGHQNAHKRERTLAKR        GGYHHY   A AP FP   GP NRSL
Sbjct: 61  RRKFYSSQALGGHQNAHKRERTLAKR--------GGYHHYTAAATAPFFPFQTGP-NRSL 120

Query: 121 GIQVHAMVHKPLTTRRFLPLRGLESSTAVLTPGIGKLPLMNAGHAINHTTGFPPRGCNSV 180
           GIQ+HAMVHKP          G         PGIGKLP +N       T   PP G N+V
Sbjct: 121 GIQLHAMVHKPPHYTAVSSSHGWSRIPIHQQPGIGKLPPIN-------THRSPPHGFNTV 180

Query: 181 GRFDFDVVRSTAATA--------DDTHKVLDLSLKL 206
           GRF+ D+ RSTAA          D+THKVLDLSLKL
Sbjct: 181 GRFNLDMRRSTAAAGGVHFDNKQDETHKVLDLSLKL 198

[Close]

BLAST of HG10004710 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 107.1 bits (266), Expect = 1.7e-23
Identity = 89/252 (35.32%), Postives = 120/252 (47.62%), Query Frame = 0


Query: 1   MESSTSPPPKTPSHN------QEENDDELEENHHHLRRGIP-----------TEELNLME 60
           ++ S SP     ++N      QEE+D + +E    ++  +             +ELNL++
Sbjct: 23  LQFSDSPKLSLENYNIDTVAAQEEDDHDQKEGVEGIKLDLMLAGYDSSQPQLNQELNLLD 82

Query: 61  GLKMG----------SSEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRFPA 120
            L+ G          S+E ++FSCN+CQR FYSSQALGGHQNAHKRERTLAKRG +   A
Sbjct: 83  CLETGVVTPSFNGSTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASA 142

Query: 121 FGGYHHYAAAPSFPLPGGPNNRSLGIQVHAMVHKPLTTRRFLPLRG---LESSTAVLTPG 180
               H Y  AP  P  G  +NR+LGIQ H+M HKP +   +    G         V  P 
Sbjct: 143 AAFGHPYGFAP-VPFHGQYSNRTLGIQAHSMSHKPSSYNVYGGEYGQINWSRIPLVQQPA 202

Query: 181 IGKLPLMNAGHAINHTTGFPP---RGCNSVGRFDFDVVRSTAATA--------------D 206
           I KL      H  +H     P     C ++GRFD   +     T+              +
Sbjct: 203 IAKL-TSTENHYNHHQMMIAPPLTSTCENIGRFDVGRIPVEFPTSELWQRGEELLKPAEE 262

[Close]

BLAST of HG10004710 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 105.1 bits (261), Expect = 6.6e-23
Identity = 73/167 (43.71%), Postives = 90/167 (53.89%), Query Frame = 0


Query: 16  QEENDDELEENHHHLRRGIPT-EELNLMEGLKMGSS-------------EPRVFSCNFCQ 75
           +++   +LE     L RG  T  ELNL++  K  SS             +PRVFSCN+CQ
Sbjct: 15  KKQGHQDLELGLTLLSRGTATSSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQ 74

Query: 76  RKFYSSQALGGHQNAHKRERTLAKRGG------QRFPA------FGGYHHYAAAPSFPLP 135
           RKFYSSQALGGHQNAHKRERTLAKRG          P+       G    +A+  S PL 
Sbjct: 75  RKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLH 134

Query: 136 GGPNNRS-LGIQVHAMVHKP-LTTRRFLPLRGLESSTAVLTPGIGKL 155
           G  NNRS LGIQ H+ +HKP    R+   L  +   +    P IGK+
Sbjct: 135 GSVNNRSTLGIQAHSTIHKPSFLGRQTTSLSHVFKQSIHQKPTIGKM 181

[Close]

BLAST of HG10004710 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 95.1 bits (235), Expect = 6.8e-20
Identity = 67/169 (39.64%), Postives = 90/169 (53.25%), Query Frame = 0


Query: 3   SSTSPPPKTPSHNQEENDDE--LEENHHHLRRGIPTEELNLMEGLKMGSSEPRVFSCNFC 62
           SS++  P   S NQ   D+E  +  + H L      ++   +      S+E ++FSCN+C
Sbjct: 7   SSSTAFPYQDSLNQSIEDEERDVHNSSHELNLIDCIDDTTSIVNESTTSTEQKLFSCNYC 66

Query: 63  QRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHYAAAPSFPLPGGPNN-RSLGI 122
           QR FYSSQALGGHQNAHKRERTLAKRG +   +   + H       P  G  NN RSLGI
Sbjct: 67  QRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGI 126

Query: 123 QVHAMVHKPLTTRRFLPLRGLESSTAV---LTPGIGKLPLMNAGHAINH 166
           Q H++ HK  +   F    G  + + +     P IGK P M+  H  +H
Sbjct: 127 QAHSISHKLSSYNGFGGHYGQINWSRLPFDQQPAIGKFPSMDNFHHHHH 175

[Close]

BLAST of HG10004710 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 87.4 bits (215), Expect = 1.4e-17
Identity = 60/137 (43.80%), Postives = 75/137 (54.74%), Query Frame = 0


Query: 14  HNQEENDDELEENHHHLRRGIPTEELN-LMEGLKMGSSEPRVFSCNFCQRKFYSSQALGG 73
           +N   N+ +LE +   L     +E  N   +  +  S   RVFSCN+CQRKFYSSQALGG
Sbjct: 43  NNNNNNNLDLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGG 102

Query: 74  HQNAHKRERTLAKRGGQR-----FPAFGGYHHYAAAPS------FPLPGGPNN-----RS 133
           HQNAHKRERTLAKR  +      FP  G   +YAAA +       PL G  N      R+
Sbjct: 103 HQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLPLHGSGNGNMTSFRT 162

[Close]

BLAST of HG10004710 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 81.6 bits (200), Expect = 7.8e-16
Identity = 43/82 (52.44%), Postives = 54/82 (65.85%), Query Frame = 0


Query: 50  SEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHYAAAPSFPLP 109
           + PRVFSCN+C+RKFYSSQALGGHQNAHKRERT+AKR       FG +H          P
Sbjct: 54  ANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHR---------P 113

Query: 110 GGPNNRSLGIQVHA-MVHKPLT 131
               + SLG+Q H+ ++H  L+
Sbjct: 114 YTYTSSSLGMQAHSGLLHHTLS 126

The following BLAST results are available for this feature:

BLAST of HG10004710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886144.1	4.1e-91	82.95	zinc finger protein 3-like [Benincasa hispida]	[more]
XP_011649844.1	2.7e-87	78.13	zinc finger protein 3 [Cucumis sativus] >KGN62985.1 hypothetical protein Csa_021...	[more]
XP_008445256.1	2.4e-83	77.13	PREDICTED: zinc finger protein 3-like [Cucumis melo] >KAA0064895.1 zinc finger p...	[more]
XP_023546670.1	1.6e-58	60.91	zinc finger protein 3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022996822.1	1.5e-56	60.09	zinc finger protein 3-like [Cucurbita maxima]	[more]

BLAST of HG10004710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42485	9.3e-22	43.71	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
Q39262	9.6e-19	39.64	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]
Q39263	2.0e-16	43.80	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q39266	1.1e-14	52.44	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q39261	1.3e-12	80.49	Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1	[more]

BLAST of HG10004710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM45	1.3e-87	78.13	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G382580 P...	[more]
A0A5A7VG79	1.2e-83	77.13	Zinc finger protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3BC89	1.2e-83	77.13	zinc finger protein 3-like OS=Cucumis melo OX=3656 GN=LOC103488342 PE=4 SV=1	[more]
A0A6J1K332	7.1e-57	60.09	zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111491949 PE=4 SV=1	[more]
A0A6J1GJK2	9.6e-46	56.02	zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111454443 PE=4 SV...	[more]

BLAST of HG10004710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10970.1	1.7e-23	35.32	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G80730.1	6.6e-23	43.71	zinc-finger protein 1	[more]
AT5G25160.1	6.8e-20	39.64	zinc finger protein 3	[more]
AT1G66140.1	1.4e-17	43.80	zinc finger protein 4	[more]
AT1G24625.1	7.8e-16	52.44	zinc finger protein 7	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 37..92 e-value: 4.8E-6 score: 28.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..36
None	No IPR available	PANTHER	PTHR47287:SF1	ZINC FINGER PROTEIN 1-LIKE	coord: 21..205
IPR044246	Zinc finger protein 3-like	PANTHER	PTHR47287	C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN	coord: 21..205
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 57..77
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 55..82 score: 11.239817
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 52..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10004710.1	HG10004710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009788	negative regulation of abscisic acid-activated signaling pathway