HG10004704 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10004704
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ethylene-responsive transcription factor ERF003-like
Location	Chr08: 19641298 .. 19641916 (+)
RNA-Seq Expression	HG10004704
Synteny	HG10004704

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTAGACCACAACAGAGATTTCGCGGTGTCCGACAACGCCATTGGGGCTCCTGGGTCTCGGAAATCCGTCATCCTTTATTGTAAGTCAAAATCTAAAGGTTATAGTTTTGAATCTTCACCCTCATACAAAGAGACTAATATATAGTGATCTTGTAAATGCAGGAAAACTAGAATCTGGCTTGGCACTTTCGAGACGGCGGAAGATGCAGCACGAGCATATGACGAAGCCGCACGCCTTATGTGTGGACCGAGAGCACGTACAAACTTCCCTTATGATGCTTCTCTGTCTCGCTCCTCGTCTTCTCGCCTTCTCTCAGCTACTCTAACGGCTAAGCTCCACCGTTGCTACATGGCGTCTTTGCAGCTAACTAAGCAATCCTCCTCTGCCGCACGTCGCCCTCAAACTGACTTTTCCATGGCGTCCGGCATTGCTCCGGTCGAGCGAGTGGAAGCGGATACGACCACGGTGAAGAAAGTCAAACTGGAGAGCGTGGATTGTGGGGAGCCGTTGATGATTGAGATGTTGGATGATGATCATATACAACAAATGATTGAGGAGCTGCTTGATTATGGCGGAATTGAGCTTCGTTCTGCTTCTGTTGGCATTGACTGTTAA

mRNA sequence

ATGCCTAGACCACAACAGAGATTTCGCGGTGTCCGACAACGCCATTGGGGCTCCTGGGTCTCGGAAATCCGTCATCCTTTATTGAAAACTAGAATCTGGCTTGGCACTTTCGAGACGGCGGAAGATGCAGCACGAGCATATGACGAAGCCGCACGCCTTATGTGTGGACCGAGAGCACGTACAAACTTCCCTTATGATGCTTCTCTGTCTCGCTCCTCGTCTTCTCGCCTTCTCTCAGCTACTCTAACGGCTAAGCTCCACCGTTGCTACATGGCGTCTTTGCAGCTAACTAAGCAATCCTCCTCTGCCGCACGTCGCCCTCAAACTGACTTTTCCATGGCGTCCGGCATTGCTCCGGTCGAGCGAGTGGAAGCGGATACGACCACGGTGAAGAAAGTCAAACTGGAGAGCGTGGATTGTGGGGAGCCGTTGATGATTGAGATGTTGGATGATGATCATATACAACAAATGATTGAGGAGCTGCTTGATTATGGCGGAATTGAGCTTCGTTCTGCTTCTGTTGGCATTGACTGTTAA

Coding sequence (CDS)

ATGCCTAGACCACAACAGAGATTTCGCGGTGTCCGACAACGCCATTGGGGCTCCTGGGTCTCGGAAATCCGTCATCCTTTATTGAAAACTAGAATCTGGCTTGGCACTTTCGAGACGGCGGAAGATGCAGCACGAGCATATGACGAAGCCGCACGCCTTATGTGTGGACCGAGAGCACGTACAAACTTCCCTTATGATGCTTCTCTGTCTCGCTCCTCGTCTTCTCGCCTTCTCTCAGCTACTCTAACGGCTAAGCTCCACCGTTGCTACATGGCGTCTTTGCAGCTAACTAAGCAATCCTCCTCTGCCGCACGTCGCCCTCAAACTGACTTTTCCATGGCGTCCGGCATTGCTCCGGTCGAGCGAGTGGAAGCGGATACGACCACGGTGAAGAAAGTCAAACTGGAGAGCGTGGATTGTGGGGAGCCGTTGATGATTGAGATGTTGGATGATGATCATATACAACAAATGATTGAGGAGCTGCTTGATTATGGCGGAATTGAGCTTCGTTCTGCTTCTGTTGGCATTGACTGTTAA

Protein sequence

MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDFSMASGIAPVERVEADTTTVKKVKLESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELRSASVGIDC

Homology

[Close]

BLAST of HG10004704 vs. NCBI nr
Match: XP_038886168.1 (ethylene-responsive transcription factor ERF003-like [Benincasa hispida])

HSP 1 Score: 334.0 bits (855), Expect = 8.2e-88
Identity = 170/175 (97.14%), Postives = 173/175 (98.86%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDFSMASGIAPV 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDFSMASGIAP+
Sbjct: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDFSMASGIAPI 120

Query: 121 ERVEADTT-TVKKVKLESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELRSASV 175
           ERVEADTT T KK+KLESVDCGEPLMIE+LDDDHIQQMIEELLDYGGIELRSASV
Sbjct: 121 ERVEADTTSTAKKIKLESVDCGEPLMIEILDDDHIQQMIEELLDYGGIELRSASV 175

[Close]

BLAST of HG10004704 vs. NCBI nr
Match: KAA0064899.1 (ethylene-responsive transcription factor ERF003-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 318.9 bits (816), Expect = 2.7e-83
Identity = 164/175 (93.71%), Postives = 166/175 (94.86%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQ-----TDFSMAS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQ     TDFS+AS
Sbjct: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDVIRTDFSVAS 120

Query: 121 GIAPVERVEADTTTVKKVKLESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELR 171
           GIAP ERVE D TT KKVK+ESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELR
Sbjct: 121 GIAPGERVEVDGTTAKKVKMESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELR 175

[Close]

BLAST of HG10004704 vs. NCBI nr
Match: XP_008445253.1 (PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo])

HSP 1 Score: 318.9 bits (816), Expect = 2.7e-83
Identity = 164/175 (93.71%), Postives = 166/175 (94.86%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 41  MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 100

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQ-----TDFSMAS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQ     TDFS+AS
Sbjct: 101 TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDVIRTDFSVAS 160

Query: 121 GIAPVERVEADTTTVKKVKLESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELR 171
           GIAP ERVE D TT KKVK+ESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELR
Sbjct: 161 GIAPGERVEVDGTTAKKVKMESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELR 215

[Close]

BLAST of HG10004704 vs. NCBI nr
Match: XP_004138708.1 (ethylene-responsive transcription factor ERF003 [Cucumis sativus] >KGN62981.1 hypothetical protein Csa_021824 [Cucumis sativus])

HSP 1 Score: 316.6 bits (810), Expect = 1.3e-82
Identity = 162/175 (92.57%), Postives = 166/175 (94.86%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQ-----TDFSMAS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCY+AS+QLTKQSSSAARRPQ     TDFS+AS
Sbjct: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYVASMQLTKQSSSAARRPQTDVIRTDFSVAS 120

Query: 121 GIAPVERVEADTTTVKKVKLESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELR 171
           GIAPVERVE DT T KKVK+ESVDC EPLMIEMLDDDHIQQMIEELLDYGGIELR
Sbjct: 121 GIAPVERVEVDTMTAKKVKMESVDCEEPLMIEMLDDDHIQQMIEELLDYGGIELR 175

[Close]

BLAST of HG10004704 vs. NCBI nr
Match: XP_022996634.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita maxima])

HSP 1 Score: 297.4 bits (760), Expect = 8.5e-77
Identity = 159/178 (89.33%), Postives = 162/178 (91.01%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQ-----TDFSMAS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQ     TDFS+ S
Sbjct: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDFSVTS 120

Query: 121 GIAPVERVEADTTTVKKVKLESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELRSAS 174
           GIAPV  VEAD T+ KKVKLESVD GEP     LDDDHIQQMIEELLDYGGIELRSA+
Sbjct: 121 GIAPV-GVEADVTSTKKVKLESVDRGEP-----LDDDHIQQMIEELLDYGGIELRSAA 172

[Close]

BLAST of HG10004704 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 6.8e-53
Identity = 110/174 (63.22%), Postives = 131/174 (75.29%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           M RPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTK--QSSSAARRPQTDFSMASGIA 120
           TNFPY+ +   +SSS+LLSATLTAKLH+CYMASLQ+TK  Q+ +  +  ++  + + G+ 
Sbjct: 61  TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSADSDGVT 120

Query: 121 PVE-RVEADTTTVKKVKLESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELRS 172
             E  +    T   ++K E  +         L++DHI+QMIEELL YG IEL S
Sbjct: 121 ANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIELCS 174

[Close]

BLAST of HG10004704 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.1e-42
Identity = 101/169 (59.76%), Postives = 120/169 (71.01%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           M RPQQR+RG RQRHWGSWVSEIRH +LKTRIW GTFE+AEDAARAYDEAARLMCG RAR
Sbjct: 1   MARPQQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSS--SAARRPQTDFSMASGIA 120
           TNFPY+ + S+SSSS+LLSATL AKLHRCYMASLQ+T+ SS   A R   +  +   GI 
Sbjct: 61  TNFPYNPNASQSSSSKLLSATLIAKLHRCYMASLQMTRPSSLPEAPRIIASPNNAVKGIG 120

Query: 121 ------PVERVEADTTT-----VKKVKLESVDCGEPLMIEMLDDDHIQQ 157
                 P +R + +  T      KKVK   V+C +    + L++DHI Q
Sbjct: 121 ADAMLLPKKREQEEQETGGNLDFKKVK---VECSQ--QFKPLEEDHIAQ 164

[Close]

BLAST of HG10004704 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.6e-25
Identity = 60/101 (59.41%), Postives = 73/101 (72.28%), Query Frame = 0


Query: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  D-----------------ASLSRSSSSRLLSATLTAKLHRC 90
           +                 +++S S+SS  LS+ L+AKL +C
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC 105

[Close]

BLAST of HG10004704 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.7e-22
Identity = 79/182 (43.41%), Postives = 97/182 (53.30%), Query Frame = 0


Query: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  DASLSRSS--------SSRLLSATLTAKLHR-C-----YMASLQLTKQSS---------S 125
             S   +S        S + LS  L AKL + C     Y+  L+L   SS          
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

Query: 126 AARRPQTDFSMASGIAPVERVEADTTTVKKVKLESVDCGEPLMIEMLDDDHIQQMIEELL 165
           +   P     +  G     R   D  T  K+K+ + D  E       DD    QMIEELL
Sbjct: 125 SKTSPNWVKLVELGDKVNARPGGDIET-NKMKVRNEDVQE-------DDQMAMQMIEELL 178

[Close]

BLAST of HG10004704 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.1e-21
Identity = 78/186 (41.94%), Postives = 100/186 (53.76%), Query Frame = 0


Query: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66  DASLSRSS----------SSRLLSATLTAKLHRC------YMASLQLTKQSS-------S 125
             S   S           S + LS  L AKL +        +  L+L   SS        
Sbjct: 65  VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQKR 124

Query: 126 AARRPQTDFSMASGIAPV---ERVEADTTTVKKVKLESVDCGEPLMIEMLDDDHI-QQMI 165
           A  +    + M   +  V     V+   TT+ K  +E  +  E  +I   D+D +  +MI
Sbjct: 125 AGSKTSPTWVMRLELGNVVNESAVDLGLTTMNKQNVEKEEEEEEAIIS--DEDQLAMEMI 184

[Close]

BLAST of HG10004704 vs. ExPASy TrEMBL
Match: A0A5A7VHF4 (Ethylene-responsive transcription factor ERF003-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002150 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.3e-83
Identity = 164/175 (93.71%), Postives = 166/175 (94.86%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQ-----TDFSMAS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQ     TDFS+AS
Sbjct: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDVIRTDFSVAS 120

Query: 121 GIAPVERVEADTTTVKKVKLESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELR 171
           GIAP ERVE D TT KKVK+ESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELR
Sbjct: 121 GIAPGERVEVDGTTAKKVKMESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELR 175

[Close]

BLAST of HG10004704 vs. ExPASy TrEMBL
Match: A0A1S3BD40 (ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=LOC103488338 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.3e-83
Identity = 164/175 (93.71%), Postives = 166/175 (94.86%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 41  MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 100

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQ-----TDFSMAS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQ     TDFS+AS
Sbjct: 101 TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDVIRTDFSVAS 160

Query: 121 GIAPVERVEADTTTVKKVKLESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELR 171
           GIAP ERVE D TT KKVK+ESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELR
Sbjct: 161 GIAPGERVEVDGTTAKKVKMESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELR 215

[Close]

BLAST of HG10004704 vs. ExPASy TrEMBL
Match: A0A0A0LSL8 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G382540 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 6.5e-83
Identity = 162/175 (92.57%), Postives = 166/175 (94.86%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQ-----TDFSMAS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCY+AS+QLTKQSSSAARRPQ     TDFS+AS
Sbjct: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYVASMQLTKQSSSAARRPQTDVIRTDFSVAS 120

Query: 121 GIAPVERVEADTTTVKKVKLESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELR 171
           GIAPVERVE DT T KKVK+ESVDC EPLMIEMLDDDHIQQMIEELLDYGGIELR
Sbjct: 121 GIAPVERVEVDTMTAKKVKMESVDCEEPLMIEMLDDDHIQQMIEELLDYGGIELR 175

[Close]

BLAST of HG10004704 vs. ExPASy TrEMBL
Match: A0A6J1K9A3 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661 GN=LOC111491817 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 4.1e-77
Identity = 159/178 (89.33%), Postives = 162/178 (91.01%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQ-----TDFSMAS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQ     TDFS+ S
Sbjct: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDFSVTS 120

Query: 121 GIAPVERVEADTTTVKKVKLESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELRSAS 174
           GIAPV  VEAD T+ KKVKLESVD GEP     LDDDHIQQMIEELLDYGGIELRSA+
Sbjct: 121 GIAPV-GVEADVTSTKKVKLESVDRGEP-----LDDDHIQQMIEELLDYGGIELRSAA 172

[Close]

BLAST of HG10004704 vs. ExPASy TrEMBL
Match: A0A6J1HED1 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=3662 GN=LOC111462772 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.7e-76
Identity = 157/178 (88.20%), Postives = 161/178 (90.45%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQ-----TDFSMAS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQ     TDFS+ S
Sbjct: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDFSVTS 120

Query: 121 GIAPVERVEADTTTVKKVKLESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELRSAS 174
           GIAPV  VE D T+ KKVKLESVD GEP     LDDDHIQQMI+ELLDYGGIELRSA+
Sbjct: 121 GIAPV-GVETDVTSTKKVKLESVDRGEP-----LDDDHIQQMIDELLDYGGIELRSAA 172

[Close]

BLAST of HG10004704 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 208.4 bits (529), Expect = 4.8e-54
Identity = 110/174 (63.22%), Postives = 131/174 (75.29%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           M RPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTK--QSSSAARRPQTDFSMASGIA 120
           TNFPY+ +   +SSS+LLSATLTAKLH+CYMASLQ+TK  Q+ +  +  ++  + + G+ 
Sbjct: 61  TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSADSDGVT 120

Query: 121 PVE-RVEADTTTVKKVKLESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELRS 172
             E  +    T   ++K E  +         L++DHI+QMIEELL YG IEL S
Sbjct: 121 ANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIELCS 174

[Close]

BLAST of HG10004704 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 115.9 bits (289), Expect = 3.3e-26
Identity = 60/101 (59.41%), Postives = 73/101 (72.28%), Query Frame = 0


Query: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  D-----------------ASLSRSSSSRLLSATLTAKLHRC 90
           +                 +++S S+SS  LS+ L+AKL +C
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC 105

[Close]

BLAST of HG10004704 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 105.9 bits (263), Expect = 3.4e-23
Identity = 79/182 (43.41%), Postives = 97/182 (53.30%), Query Frame = 0


Query: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  DASLSRSS--------SSRLLSATLTAKLHR-C-----YMASLQLTKQSS---------S 125
             S   +S        S + LS  L AKL + C     Y+  L+L   SS          
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

Query: 126 AARRPQTDFSMASGIAPVERVEADTTTVKKVKLESVDCGEPLMIEMLDDDHIQQMIEELL 165
           +   P     +  G     R   D  T  K+K+ + D  E       DD    QMIEELL
Sbjct: 125 SKTSPNWVKLVELGDKVNARPGGDIET-NKMKVRNEDVQE-------DDQMAMQMIEELL 178

[Close]

BLAST of HG10004704 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 104.8 bits (260), Expect = 7.5e-23
Identity = 78/186 (41.94%), Postives = 100/186 (53.76%), Query Frame = 0


Query: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66  DASLSRSS----------SSRLLSATLTAKLHRC------YMASLQLTKQSS-------S 125
             S   S           S + LS  L AKL +        +  L+L   SS        
Sbjct: 65  VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQKR 124

Query: 126 AARRPQTDFSMASGIAPV---ERVEADTTTVKKVKLESVDCGEPLMIEMLDDDHI-QQMI 165
           A  +    + M   +  V     V+   TT+ K  +E  +  E  +I   D+D +  +MI
Sbjct: 125 AGSKTSPTWVMRLELGNVVNESAVDLGLTTMNKQNVEKEEEEEEAIIS--DEDQLAMEMI 184

[Close]

BLAST of HG10004704 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 97.1 bits (240), Expect = 1.6e-20
Identity = 77/182 (42.31%), Postives = 95/182 (52.20%), Query Frame = 0


Query: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQR WGSWVSEIRHPLL   +WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLL---VWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  DASLSRSS--------SSRLLSATLTAKLHR-C-----YMASLQLTKQSS---------S 125
             S   +S        S + LS  L AKL + C     Y+  L+L   SS          
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

Query: 126 AARRPQTDFSMASGIAPVERVEADTTTVKKVKLESVDCGEPLMIEMLDDDHIQQMIEELL 165
           +   P     +  G     R   D  T  K+K+ + D  E       DD    QMIEELL
Sbjct: 125 SKTSPNWVKLVELGDKVNARPGGDIET-NKMKVRNEDVQE-------DDQMAMQMIEELL 175

The following BLAST results are available for this feature:

BLAST of HG10004704 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886168.1	8.2e-88	97.14	ethylene-responsive transcription factor ERF003-like [Benincasa hispida]	[more]
KAA0064899.1	2.7e-83	93.71	ethylene-responsive transcription factor ERF003-like protein [Cucumis melo var. ...	[more]
XP_008445253.1	2.7e-83	93.71	PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo]	[more]
XP_004138708.1	1.3e-82	92.57	ethylene-responsive transcription factor ERF003 [Cucumis sativus] >KGN62981.1 hy...	[more]
XP_022996634.1	8.5e-77	89.33	ethylene-responsive transcription factor ERF003-like [Cucurbita maxima]	[more]

BLAST of HG10004704 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AW5	6.8e-53	63.22	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
P16146	1.1e-42	59.76	Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1	[more]
Q9XI33	4.6e-25	59.41	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q3E958	4.7e-22	43.41	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LFN7	1.1e-21	41.94	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of HG10004704 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VHF4	1.3e-83	93.71	Ethylene-responsive transcription factor ERF003-like protein OS=Cucumis melo var...	[more]
A0A1S3BD40	1.3e-83	93.71	ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0LSL8	6.5e-83	92.57	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G382540 PE=...	[more]
A0A6J1K9A3	4.1e-77	89.33	ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1HED1	2.7e-76	88.20	ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=36...	[more]

BLAST of HG10004704 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25190.1	4.8e-54	63.22	Integrase-type DNA-binding superfamily protein	[more]
AT1G15360.1	3.3e-26	59.41	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.2	3.4e-23	43.41	Integrase-type DNA-binding superfamily protein	[more]
AT5G11190.1	7.5e-23	41.94	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.1	1.6e-20	42.31	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 30..46 score: 70.91 coord: 8..19 score: 61.21
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 7..70 e-value: 2.0E-39 score: 147.0
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 7..56 e-value: 1.9E-11 score: 44.0
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 7..64 score: 20.718536
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 6..66 e-value: 1.63186E-34 score: 114.291
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 6..66 e-value: 4.5E-26 score: 92.8
None	No IPR available	PANTHER	PTHR31194:SF112	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003	coord: 1..172
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 1..172
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 7..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10004704.1	HG10004704.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity