HG10004660 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10004660
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPlant protein of unknown function (DUF247)
LocationChr08: 19317320 .. 19318195 (-)
RNA-Seq ExpressionHG10004660
SyntenyHG10004660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTGGAAAATCAAGTTCCTTTCTTTCTACTTCAACATTTGTACGACCTGTTACCAGAAGATAGTATCCCCACGTTGTCCTTGACAAATCTTACAAATTTTGCTCTATGTAATGGGTCGTTGGTAGATGAATATAAAGATCGTTTTGTTCCCTGCTCTAATATAAAGCCAAAGCACTTGGTCGATTTCTTAAGATTCTACTTCGTCCCCTTGCCCTTGCCCATTCCTGATGATATGCAACTTAAAAAAAAGCATGAGAATAAGAAGCCTCATGTGGAGAATAGTGAGAAGGAGGAAAATTGTCCATCCATAACTGAGATCTACGAGGCTGGTGTTATCATCAAGAAAGCAGAAAACTCCCAACTTATAACCAACATAAGTTTCAAAAATGGGGTTTTGGAAATCCCACCCTTGGATATTTATGATGATTTTGAGATTTATCTGCGAAACCTAATAGCATTTGAGCATTTTCCCGTAGAAGACAAGAACAACTATGCAATCCAATATGTATCATTTCTGGATGATTTGATCAGCACAGAGAAAGACGTATGTTTACTTGTGAAGGCCGGAGTCATAATCAACCAAATTGGTGGTAGTGATAAAGAAGTTTCAGATTTGTTTAACAGCCTCTGTAAATTTGTTTCAATCCCAAGTTCTTCCCACTATGACCCTATCAGCAAAGATCTGCGTGAACACTGCAATGGAAAGTGGAACAAGGCCAAAGCTTCACTCAAACATAACTATTTCAACACGCCATGGGCCTTTATCTCCTTCTTTGCTGCATCCTTCCTCATTCTTCTCACCCTCCTTCAAACCATTTTCTCTGCTATCTCTGCATTTCCTAATTACTCAATGTTTGCTCCTTTTACATAA

mRNA sequence

ATGAAGTTGGAAAATCAAGTTCCTTTCTTTCTACTTCAACATTTGTACGACCTGTTACCAGAAGATAGTATCCCCACGTTGTCCTTGACAAATCTTACAAATTTTGCTCTATGTAATGGGTCGTTGGTAGATGAATATAAAGATCGTTTTGTTCCCTGCTCTAATATAAAGCCAAAGCACTTGGTCGATTTCTTAAGATTCTACTTCGTCCCCTTGCCCTTGCCCATTCCTGATGATATGCAACTTAAAAAAAAGCATGAGAATAAGAAGCCTCATGTGGAGAATAGTGAGAAGGAGGAAAATTGTCCATCCATAACTGAGATCTACGAGGCTGGTGTTATCATCAAGAAAGCAGAAAACTCCCAACTTATAACCAACATAAGTTTCAAAAATGGGGTTTTGGAAATCCCACCCTTGGATATTTATGATGATTTTGAGATTTATCTGCGAAACCTAATAGCATTTGAGCATTTTCCCGTAGAAGACAAGAACAACTATGCAATCCAATATGTATCATTTCTGGATGATTTGATCAGCACAGAGAAAGACGTATGTTTACTTGTGAAGGCCGGAGTCATAATCAACCAAATTGGTGGTAGTGATAAAGAAGTTTCAGATTTGTTTAACAGCCTCTGTAAATTTGTTTCAATCCCAAGTTCTTCCCACTATGACCCTATCAGCAAAGATCTGCGTGAACACTGCAATGGAAAGTGGAACAAGGCCAAAGCTTCACTCAAACATAACTATTTCAACACGCCATGGGCCTTTATCTCCTTCTTTGCTGCATCCTTCCTCATTCTTCTCACCCTCCTTCAAACCATTTTCTCTGCTATCTCTGCATTTCCTAATTACTCAATGTTTGCTCCTTTTACATAA

Coding sequence (CDS)

ATGAAGTTGGAAAATCAAGTTCCTTTCTTTCTACTTCAACATTTGTACGACCTGTTACCAGAAGATAGTATCCCCACGTTGTCCTTGACAAATCTTACAAATTTTGCTCTATGTAATGGGTCGTTGGTAGATGAATATAAAGATCGTTTTGTTCCCTGCTCTAATATAAAGCCAAAGCACTTGGTCGATTTCTTAAGATTCTACTTCGTCCCCTTGCCCTTGCCCATTCCTGATGATATGCAACTTAAAAAAAAGCATGAGAATAAGAAGCCTCATGTGGAGAATAGTGAGAAGGAGGAAAATTGTCCATCCATAACTGAGATCTACGAGGCTGGTGTTATCATCAAGAAAGCAGAAAACTCCCAACTTATAACCAACATAAGTTTCAAAAATGGGGTTTTGGAAATCCCACCCTTGGATATTTATGATGATTTTGAGATTTATCTGCGAAACCTAATAGCATTTGAGCATTTTCCCGTAGAAGACAAGAACAACTATGCAATCCAATATGTATCATTTCTGGATGATTTGATCAGCACAGAGAAAGACGTATGTTTACTTGTGAAGGCCGGAGTCATAATCAACCAAATTGGTGGTAGTGATAAAGAAGTTTCAGATTTGTTTAACAGCCTCTGTAAATTTGTTTCAATCCCAAGTTCTTCCCACTATGACCCTATCAGCAAAGATCTGCGTGAACACTGCAATGGAAAGTGGAACAAGGCCAAAGCTTCACTCAAACATAACTATTTCAACACGCCATGGGCCTTTATCTCCTTCTTTGCTGCATCCTTCCTCATTCTTCTCACCCTCCTTCAAACCATTTTCTCTGCTATCTCTGCATTTCCTAATTACTCAATGTTTGCTCCTTTTACATAA

Protein sequence

MKLENQVPFFLLQHLYDLLPEDSIPTLSLTNLTNFALCNGSLVDEYKDRFVPCSNIKPKHLVDFLRFYFVPLPLPIPDDMQLKKKHENKKPHVENSEKEENCPSITEIYEAGVIIKKAENSQLITNISFKNGVLEIPPLDIYDDFEIYLRNLIAFEHFPVEDKNNYAIQYVSFLDDLISTEKDVCLLVKAGVIINQIGGSDKEVSDLFNSLCKFVSIPSSSHYDPISKDLREHCNGKWNKAKASLKHNYFNTPWAFISFFAASFLILLTLLQTIFSAISAFPNYSMFAPFT
Homology
BLAST of HG10004660 vs. NCBI nr
Match: XP_038890800.1 (UPF0481 protein At3g47200-like [Benincasa hispida])

HSP 1 Score: 343.6 bits (880), Expect = 1.7e-90
Identity = 187/290 (64.48%), Postives = 221/290 (76.21%), Query Frame = 0

Query: 1   MKLENQVPFFLLQHLYDLLPEDSIPTL--SLTNLTN----FALCNGSLVDEYKDRFVPCS 60
           +KLENQVPFFLL++L++L+P+  +P +  S  +LT+    F L     +D YK+      
Sbjct: 203 IKLENQVPFFLLRNLFNLIPKHDVPMIIFSFGDLTHKALKFRLVRKYEIDLYKE------ 262

Query: 61  NIKPKHLVDFLRFYFVPLPLPIPDDMQLKKKHENKKPHVENSEKEENC-PSITEIYEAGV 120
              PKHLVD L FYFVPLPL   DDMQ      NK    +N E+     PSITE+ EAGV
Sbjct: 263 ---PKHLVDLLSFYFVPLPL---DDMQ------NKHHGFKNGEEHRWIPPSITELCEAGV 322

Query: 121 IIKKAENSQLITNISFKNGVLEIPPLDIYDDFEIYLRNLIAFEHFPVEDKNNYAIQYVSF 180
            IKKAEN++ +TNI+FKNGVLEIPPL IYD+FE+ LRN++AFE      KN Y IQYV F
Sbjct: 323 TIKKAENAKYVTNITFKNGVLEIPPLHIYDEFELMLRNMVAFEQISAGKKNKYVIQYVLF 382

Query: 181 LDDLISTEKDVCLLVKAGVIINQIGGSDKEVSDLFNSLCKFVSIPSSSHYDPISKDLREH 240
           +DDLISTEKDV LLV+AGVIINQIGGSDKEVSDLFN+LCKF++ P SSH+DPI KDL +H
Sbjct: 383 MDDLISTEKDVRLLVEAGVIINQIGGSDKEVSDLFNNLCKFITAPRSSHFDPIIKDLCDH 442

Query: 241 CNGKWNKAKASLKHNYFNTPWAFISFFAASFLILLTLLQTIFSAISAFPN 284
           CNG+WNKAKASLKHNYFNTPWAFIS FAAS LILLT+LQTIFSAISAFP+
Sbjct: 443 CNGRWNKAKASLKHNYFNTPWAFISLFAASLLILLTILQTIFSAISAFPS 474

BLAST of HG10004660 vs. NCBI nr
Match: XP_038886585.1 (UPF0481 protein At3g47200-like [Benincasa hispida])

HSP 1 Score: 316.2 bits (809), Expect = 2.9e-82
Identity = 189/324 (58.33%), Postives = 224/324 (69.14%), Query Frame = 0

Query: 2   KLENQVPFFLLQHLYDLLPEDSIP----------TLSLTNLTNFALCNGSLVDEYKDRFV 61
           KLENQVPFFLL+ L+ L+PED +P           +S T LT + + N   + +Y+   +
Sbjct: 202 KLENQVPFFLLRSLFHLIPEDDVPMISFIDDEDGPISFTQLT-YNVLNFGFMGKYE---I 261

Query: 62  PCSNI-KPKHLVDFL-RFYFVPLP-------------------------LPI----PDDM 121
            C  + +P HLVDFL  F FVPLP                         LP      ++ 
Sbjct: 262 CCELLEEPAHLVDFLIYFLFVPLPPGMKNRQHEKSNENNNDFSSLLRFLLPAHWKKQNED 321

Query: 122 QLKKKHENKKPHVENS-EKEENCPSITEIYEAGVIIKKAENSQLITNISFKNGVLEIPPL 181
           Q  +K +NKKPH EN+ EK+   PSITE+ EAGV IKKAEN++ + NISFKNGVLEIPPL
Sbjct: 322 QNSEKKKNKKPHDENNMEKQWVPPSITELCEAGVTIKKAENTKCLMNISFKNGVLEIPPL 381

Query: 182 DIYDDFEIYLRNLIAFEHFPVEDKNNYAIQYVSFLDDLISTEKDVCLLVKAGVIINQIGG 241
            I D FEI +RNLIAFEHF  E KN Y IQYVSFLD LI ++KDV LLVKA +IIN IGG
Sbjct: 382 FITDSFEIIMRNLIAFEHFSTESKNKYVIQYVSFLDYLICSDKDVSLLVKADIIINDIGG 441

Query: 242 SDKEVSDLFNSLCKFVSIPS-SSHYDPISKDLREHCNGKWNKAKASLKHNYFNTPWAFIS 283
           SD EVS LFN+LCKFV++PS SSH++ ISKDL EH NG WNK+KASLKHNYFNTPWAFIS
Sbjct: 442 SDIEVSQLFNNLCKFVAVPSYSSHFNNISKDLVEHYNGWWNKSKASLKHNYFNTPWAFIS 501

BLAST of HG10004660 vs. NCBI nr
Match: XP_038884451.1 (UPF0481 protein At3g47200-like [Benincasa hispida] >XP_038884452.1 UPF0481 protein At3g47200-like [Benincasa hispida] >XP_038884453.1 UPF0481 protein At3g47200-like [Benincasa hispida])

HSP 1 Score: 312.0 bits (798), Expect = 5.4e-81
Identity = 182/309 (58.90%), Postives = 221/309 (71.52%), Query Frame = 0

Query: 1   MKLENQVPFFLLQHLYDLLPE-DSIPTL-SLTNLTNFALCNGSLVDEYK--DRFVPCSNI 60
           +KLENQVPF LLQ+L+DL+P+ D  P + SL  LT+ AL    LV  Y+  D +      
Sbjct: 211 IKLENQVPFILLQNLFDLIPKLDDDPMISSLIRLTDIALKGFGLVSRYEIDDLYYK---- 270

Query: 61  KPKHLVDFLRFYFVPLPLPIPDDMQ--------LKKKHE----------NKKP-HVENSE 120
           +PKHL+DFL FYF+PLP   PDDMQ        ++KK+           NKKP H +NS 
Sbjct: 271 EPKHLLDFLSFYFLPLP---PDDMQNKQDEIKNIEKKNNDFRKLLSCLWNKKPDHEKNSY 330

Query: 121 KEENC--PSITEIYEAGVIIKKAENSQL-ITNISFKNGVLEIPPLDIYDDFEIYLRNLIA 180
           ++     PS TE+ EAG+ IK A+N  L +TNISFKNGVLEIPP+ I   FEI +RNLIA
Sbjct: 331 QQWRLSPPSTTELCEAGITIKVADNENLCLTNISFKNGVLEIPPIIIESTFEIVVRNLIA 390

Query: 181 FEHFPVEDKNNYAIQYVSFLDDLISTEKDVCLLVKAGVIINQIGGSDKEVSDLFNSLCKF 240
           F+H+P  ++  Y IQYV FLDDLISTE+DV LLVKAGVIIN  GGSDKE+SD+FN+  KF
Sbjct: 391 FDHYPAGNQKQYVIQYVLFLDDLISTEEDVHLLVKAGVIINTFGGSDKEISDMFNNFSKF 450

Query: 241 VSIPSSSHYDPISKDLREHCNGKWNKAKASLKHNYFNTPWAFISFFAASFLILLTLLQTI 284
              P +SH+D +S+ LR HCNG+WNKAKASLK NYFNTPWA ISF AA+FLILLTLLQTI
Sbjct: 451 AIFPVTSHFDDMSQALRVHCNGRWNKAKASLKRNYFNTPWAVISFIAATFLILLTLLQTI 510

BLAST of HG10004660 vs. NCBI nr
Match: KAA0064946.1 (UPF0481 protein [Cucumis melo var. makuwa])

HSP 1 Score: 309.3 bits (791), Expect = 3.5e-80
Identity = 179/311 (57.56%), Postives = 220/311 (70.74%), Query Frame = 0

Query: 1   MKLENQVPFFLLQHLYDLLPEDSIPTLSLTNLTNFALCNGSLVDEYKDRFVPCSNIKPKH 60
           +KLENQVPFFLLQH++ ++P+ S P +S  NLT  AL +   +  YK   V     +PKH
Sbjct: 230 IKLENQVPFFLLQHMFHMIPQHS-PPVSFINLTYSALYDW-FISTYKICSVGIVPNEPKH 289

Query: 61  LVDFLRFYFVPLPLPIPDDM----QLKKKHENKK-------------------PHVENSE 120
           LV FL FYF+  P    DDM    Q  K  ENKK                    + +N +
Sbjct: 290 LVHFLSFYFI--PSHTTDDMIQNKQEIKNSENKKKNNYNFLSFFSTLFCCQLWQNPDNKK 349

Query: 121 KEE----NCPSITEIYEAGVIIKKAENSQLITNISFKNGVLEIPPLDIYDDFEIYLRNLI 180
           K +    + PSITE+ E+GV I+KA+N++ +TNI+FKNGVL+IP L IYD+FE+  RNLI
Sbjct: 350 KNDQELLSPPSITELCESGVTIEKAKNAKYLTNITFKNGVLKIPHLHIYDEFELMFRNLI 409

Query: 181 AFEHFPVEDKNNYAIQYVSFLDDLISTEKDVCLLVKAGVIINQIGGSDKEVSDLFNSLCK 240
           AFE FP  ++N YA QY+ F+DDLISTEKDV LLV +GVIIN IGGSDKEVS+LFN+L K
Sbjct: 410 AFEQFPAGNENMYATQYILFMDDLISTEKDVRLLVNSGVIINNIGGSDKEVSELFNNLGK 469

Query: 241 FVS-IPSSSHYDPISKDLREHCNGKWNKAKASLKHNYFNTPWAFISFFAASFLILLTLLQ 284
           FV+  PS   ++ ISK LR+HCNG+WNKAKASLKHNYFNTPWAFISFFAASFL+LLTLLQ
Sbjct: 470 FVNQCPSPYMFNHISKALRKHCNGRWNKAKASLKHNYFNTPWAFISFFAASFLVLLTLLQ 529

BLAST of HG10004660 vs. NCBI nr
Match: KAA0064941.1 (UPF0481 protein [Cucumis melo var. makuwa])

HSP 1 Score: 307.8 bits (787), Expect = 1.0e-79
Identity = 174/309 (56.31%), Postives = 214/309 (69.26%), Query Frame = 0

Query: 1   MKLENQVPFFLLQHLYDLLPEDSIPT----------LSLTNLTNFALCNGSLVDEYKDRF 60
           +KLENQVPFFLLQ+L+DL+P+D+  T          +SL +LT  AL     V EY+   
Sbjct: 201 IKLENQVPFFLLQNLFDLIPKDNDDTSSIVDYEAGPISLIDLTYMALKAFGFVREYEINN 260

Query: 61  VPCSNIKPKHLVDFLRFYFVPLPLPIPDDMQLKKKHENKKP------HVENSEKEE---- 120
           +   N  P+H++D L FYF+P+P   PD  +   K +NK        H+ N + +     
Sbjct: 261 LYHKN--PEHILDLLSFYFLPVPHNDPDMNKQHDKRKNKADFLSFFRHLWNKKSDHKKIS 320

Query: 121 -----NCPSITEIYEAGVIIKKAENSQL-ITNISFKNGVLEIPPLDIYDDFEIYLRNLIA 180
                + P+ITE++EAGV IK AE   L   NISFKNGVLEIPP+ I   FE+ +RN++A
Sbjct: 321 KQRRLSPPTITELFEAGVTIKAAEKENLCFMNISFKNGVLEIPPIVIEGTFEVVIRNVLA 380

Query: 181 FEHFPVEDKNNYAIQYVSFLDDLISTEKDVCLLVKAGVIINQIGGSDKEVSDLFNSLCKF 240
           FE FP  ++  YAIQYV+FLDDLISTEKD+CLLVKAGVI N  GGSDKE S+LFNSL K 
Sbjct: 381 FEIFPAGNQKKYAIQYVTFLDDLISTEKDLCLLVKAGVITNDTGGSDKEASELFNSLTKL 440

Query: 241 VSIPSSSHYDPISKDLREHCNGKWNKAKASLKHNYFNTPWAFISFFAASFLILLTLLQTI 284
           V+ P SS++D  SK LR HC+G WNKAKASLKHNYFNTPWA ISFFAA FLI+LT+LQTI
Sbjct: 441 VTTPLSSYFDDTSKALRVHCDGSWNKAKASLKHNYFNTPWAIISFFAAIFLIILTILQTI 500

BLAST of HG10004660 vs. ExPASy Swiss-Prot
Match: Q9SD53 (UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.5e-20
Identity = 88/295 (29.83%), Postives = 135/295 (45.76%), Query Frame = 0

Query: 3   LENQVPFFLLQHLYDLLPEDSIPTLSLTNLTNFALCNGSLVDEYKDRFVPCSNIKPKHLV 62
           LENQVPFF+LQ LY       I   S  N   F       +D+    +    N K KHL+
Sbjct: 179 LENQVPFFVLQTLY---VGSKIGVSSDLNRIAFHFFKNP-IDKEGSYWEKHRNYKAKHLL 238

Query: 63  DFLRFYFVPLPLPIPDDMQLKKKHENKKPHVE---NSEKEENCPSITEIYEAGVIIKKAE 122
           D +R  F+P            +  +   PHV+   +  K  N PS+    +A  +I  A+
Sbjct: 239 DLIRETFLP---------NTSESDKASSPHVQVQLHEGKSGNVPSVDS--KAVPLILSAK 298

Query: 123 NSQL--------------ITNISFKNGVLEIPPLDIYDDFEIYLRNLIAFEHFPVEDKNN 182
             +L              I N+  K   L+IP L        +  N +AFE F   D +N
Sbjct: 299 RLRLQGIKFRLRRSKEDSILNVRLKKNKLQIPQLRFDGFISSFFLNCVAFEQF-YTDSSN 358

Query: 183 YAIQYVSFLDDLISTEKDVCLLVKAGVIINQIGGSDKEVSDLFNSLCKFVSIP-SSSHYD 242
               Y+ F+  L++ E+DV  L    +II    GS+ EVS+ F ++ K V     +S+ +
Sbjct: 359 EITTYIVFMGCLLNNEEDVTFLRNDKLIIENHFGSNNEVSEFFKTISKDVVFEVDTSYLN 418

Query: 243 PISKDLREHCNGKWNKAKASLKHNYFNTPWAFISFFAASFLILLTLLQTIFSAIS 280
            + K + E+    +N   A  +H +F +PW F+S  A  F+ILLT+LQ+  + +S
Sbjct: 419 NVFKGVNEYTKKWYNGLWAGFRHTHFESPWTFLSSCAVLFVILLTMLQSTVAILS 457

BLAST of HG10004660 vs. ExPASy TrEMBL
Match: A0A5A7VF39 (UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002650 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.7e-80
Identity = 179/311 (57.56%), Postives = 220/311 (70.74%), Query Frame = 0

Query: 1   MKLENQVPFFLLQHLYDLLPEDSIPTLSLTNLTNFALCNGSLVDEYKDRFVPCSNIKPKH 60
           +KLENQVPFFLLQH++ ++P+ S P +S  NLT  AL +   +  YK   V     +PKH
Sbjct: 230 IKLENQVPFFLLQHMFHMIPQHS-PPVSFINLTYSALYDW-FISTYKICSVGIVPNEPKH 289

Query: 61  LVDFLRFYFVPLPLPIPDDM----QLKKKHENKK-------------------PHVENSE 120
           LV FL FYF+  P    DDM    Q  K  ENKK                    + +N +
Sbjct: 290 LVHFLSFYFI--PSHTTDDMIQNKQEIKNSENKKKNNYNFLSFFSTLFCCQLWQNPDNKK 349

Query: 121 KEE----NCPSITEIYEAGVIIKKAENSQLITNISFKNGVLEIPPLDIYDDFEIYLRNLI 180
           K +    + PSITE+ E+GV I+KA+N++ +TNI+FKNGVL+IP L IYD+FE+  RNLI
Sbjct: 350 KNDQELLSPPSITELCESGVTIEKAKNAKYLTNITFKNGVLKIPHLHIYDEFELMFRNLI 409

Query: 181 AFEHFPVEDKNNYAIQYVSFLDDLISTEKDVCLLVKAGVIINQIGGSDKEVSDLFNSLCK 240
           AFE FP  ++N YA QY+ F+DDLISTEKDV LLV +GVIIN IGGSDKEVS+LFN+L K
Sbjct: 410 AFEQFPAGNENMYATQYILFMDDLISTEKDVRLLVNSGVIINNIGGSDKEVSELFNNLGK 469

Query: 241 FVS-IPSSSHYDPISKDLREHCNGKWNKAKASLKHNYFNTPWAFISFFAASFLILLTLLQ 284
           FV+  PS   ++ ISK LR+HCNG+WNKAKASLKHNYFNTPWAFISFFAASFL+LLTLLQ
Sbjct: 470 FVNQCPSPYMFNHISKALRKHCNGRWNKAKASLKHNYFNTPWAFISFFAASFLVLLTLLQ 529

BLAST of HG10004660 vs. ExPASy TrEMBL
Match: A0A5A7VGS6 (UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002590 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 5.0e-80
Identity = 174/309 (56.31%), Postives = 214/309 (69.26%), Query Frame = 0

Query: 1   MKLENQVPFFLLQHLYDLLPEDSIPT----------LSLTNLTNFALCNGSLVDEYKDRF 60
           +KLENQVPFFLLQ+L+DL+P+D+  T          +SL +LT  AL     V EY+   
Sbjct: 201 IKLENQVPFFLLQNLFDLIPKDNDDTSSIVDYEAGPISLIDLTYMALKAFGFVREYEINN 260

Query: 61  VPCSNIKPKHLVDFLRFYFVPLPLPIPDDMQLKKKHENKKP------HVENSEKEE---- 120
           +   N  P+H++D L FYF+P+P   PD  +   K +NK        H+ N + +     
Sbjct: 261 LYHKN--PEHILDLLSFYFLPVPHNDPDMNKQHDKRKNKADFLSFFRHLWNKKSDHKKIS 320

Query: 121 -----NCPSITEIYEAGVIIKKAENSQL-ITNISFKNGVLEIPPLDIYDDFEIYLRNLIA 180
                + P+ITE++EAGV IK AE   L   NISFKNGVLEIPP+ I   FE+ +RN++A
Sbjct: 321 KQRRLSPPTITELFEAGVTIKAAEKENLCFMNISFKNGVLEIPPIVIEGTFEVVIRNVLA 380

Query: 181 FEHFPVEDKNNYAIQYVSFLDDLISTEKDVCLLVKAGVIINQIGGSDKEVSDLFNSLCKF 240
           FE FP  ++  YAIQYV+FLDDLISTEKD+CLLVKAGVI N  GGSDKE S+LFNSL K 
Sbjct: 381 FEIFPAGNQKKYAIQYVTFLDDLISTEKDLCLLVKAGVITNDTGGSDKEASELFNSLTKL 440

Query: 241 VSIPSSSHYDPISKDLREHCNGKWNKAKASLKHNYFNTPWAFISFFAASFLILLTLLQTI 284
           V+ P SS++D  SK LR HC+G WNKAKASLKHNYFNTPWA ISFFAA FLI+LT+LQTI
Sbjct: 441 VTTPLSSYFDDTSKALRVHCDGSWNKAKASLKHNYFNTPWAIISFFAAIFLIILTILQTI 500

BLAST of HG10004660 vs. ExPASy TrEMBL
Match: A0A1S3BD29 (LOW QUALITY PROTEIN: UPF0481 protein At3g47200-like OS=Cucumis melo OX=3656 GN=LOC103488563 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 5.0e-80
Identity = 178/310 (57.42%), Postives = 219/310 (70.65%), Query Frame = 0

Query: 1   MKLENQVPFFLLQHLYDLLPEDSIPTLSLTNLTNFALCNGSLVDEYKDRFVPCSNIKPKH 60
           +KLENQVPFFLLQH++ ++P+ S P +S  NLT  AL +   +  YK   V     +PKH
Sbjct: 230 IKLENQVPFFLLQHMFHMIPQHS-PPVSFINLTYSALYDW-FISTYKICSVGIVPNEPKH 289

Query: 61  LVDFLRFYFVPLPLPIPDDM----QLKKKHENKKPH----------------VENSEKEE 120
           LV FL FYF+  P    DDM    Q  K  ENKK +                 +N + ++
Sbjct: 290 LVHFLSFYFI--PSHTTDDMIQNKQEIKNSENKKKNNYNFLSFFSTLFCCQLWQNPDNKK 349

Query: 121 N------CPSITEIYEAGVIIKKAENSQLITNISFKNGVLEIPPLDIYDDFEIYLRNLIA 180
                   PSITE+ E+GV I+KA+N++ +TNI+FKNGVL+IP L IYD+FE+  RNLIA
Sbjct: 350 KMIRNFCLPSITELCESGVTIEKAKNAKYLTNITFKNGVLKIPHLHIYDEFELMFRNLIA 409

Query: 181 FEHFPVEDKNNYAIQYVSFLDDLISTEKDVCLLVKAGVIINQIGGSDKEVSDLFNSLCKF 240
           FE FP  ++N YA QY+ F+DDLISTEKDV LLV +GVIIN IGGSDKEVS+LFN+L KF
Sbjct: 410 FEQFPAGNENMYATQYILFMDDLISTEKDVRLLVNSGVIINNIGGSDKEVSELFNNLGKF 469

Query: 241 VS-IPSSSHYDPISKDLREHCNGKWNKAKASLKHNYFNTPWAFISFFAASFLILLTLLQT 284
           V+  PS   ++ ISK LR+HCNG+WNKAKASLKHNYFNTPWAFISFFAASFL+LLTLLQT
Sbjct: 470 VNQCPSPYMFNHISKALRKHCNGRWNKAKASLKHNYFNTPWAFISFFAASFLVLLTLLQT 529

BLAST of HG10004660 vs. ExPASy TrEMBL
Match: A0A5A7V9V0 (UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002610 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 1.1e-79
Identity = 170/286 (59.44%), Postives = 210/286 (73.43%), Query Frame = 0

Query: 1   MKLENQVPFFLLQHLYDLLPEDSIPTL--SLTNLTNFALCNGSLVDEYKDRFVPCSNIKP 60
           +KLENQVPFFLLQ+L+DL+P+  I  +  S  +LT  AL    LV  Y+         +P
Sbjct: 189 IKLENQVPFFLLQYLFDLIPKHDISMMISSFRDLTLRAL-KFRLVRTYEINLFK----EP 248

Query: 61  KHLVDFLRFYFVPLPLPIPDDMQLKKKHENKKPHVENSEKEEN---CPSITEIYEAGVII 120
           KH VD L FYFVP            +K  N+    +++ +E+N    PSITE+ EAGV I
Sbjct: 249 KHFVDLLTFYFVP---------SAGQKVNNQHGIFKSTIEEKNRWIPPSITELREAGVTI 308

Query: 121 KKAENSQLITNISFKNGVLEIPPLDIYDDFEIYLRNLIAFEHFPVEDKNNYAIQYVSFLD 180
           KKAE ++ +T+I+FKNGVL IPPL IYD+FE+ LRN++AFE    +  N Y IQYV F+D
Sbjct: 309 KKAEKAKHLTDITFKNGVLRIPPLHIYDEFELVLRNMVAFEQISAKKMNKYVIQYVLFMD 368

Query: 181 DLISTEKDVCLLVKAGVIINQIGGSDKEVSDLFNSLCKFVSIPSSSHYDPISKDLREHCN 240
           DLISTEKDV LLV+AGVIINQIGGSDKEV+DLFN+ CKF++ P SS++D I KDL EHCN
Sbjct: 369 DLISTEKDVRLLVEAGVIINQIGGSDKEVADLFNNFCKFITAPKSSNFDSIIKDLCEHCN 428

Query: 241 GKWNKAKASLKHNYFNTPWAFISFFAASFLILLTLLQTIFSAISAF 282
           G+WN+AKASLKHNYFNTPWAFISFFAA+ LILLTLLQTIF+AI+ F
Sbjct: 429 GRWNRAKASLKHNYFNTPWAFISFFAATLLILLTLLQTIFTAITTF 460

BLAST of HG10004660 vs. ExPASy TrEMBL
Match: A0A1S3BCY5 (UPF0481 protein At3g47200-like OS=Cucumis melo OX=3656 GN=LOC103488292 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 1.4e-79
Identity = 170/286 (59.44%), Postives = 209/286 (73.08%), Query Frame = 0

Query: 1   MKLENQVPFFLLQHLYDLLPEDSIPTL--SLTNLTNFALCNGSLVDEYKDRFVPCSNIKP 60
           +KLENQVPFFLLQ+L+DL+P+  I  +  S  +LT  AL    LV  Y+         +P
Sbjct: 189 IKLENQVPFFLLQYLFDLIPKHDISMMISSFRDLTLRAL-KFRLVRTYEINLFK----EP 248

Query: 61  KHLVDFLRFYFVPLPLPIPDDMQLKKKHENKKPHVENSEKEEN---CPSITEIYEAGVII 120
           KH VD L FYFVP            +K  N+    +++ +E+N    PSITE+ EAGV I
Sbjct: 249 KHFVDLLTFYFVP---------SAGQKVNNQHGIFKSTIEEKNRWIPPSITELREAGVTI 308

Query: 121 KKAENSQLITNISFKNGVLEIPPLDIYDDFEIYLRNLIAFEHFPVEDKNNYAIQYVSFLD 180
           KKAE ++ +T+I+FKNGVL IPPL IYD+FE+ LRN++AFE       N Y IQYV F+D
Sbjct: 309 KKAEKAKHLTDITFKNGVLRIPPLHIYDEFELVLRNMVAFEQISARKMNKYVIQYVLFMD 368

Query: 181 DLISTEKDVCLLVKAGVIINQIGGSDKEVSDLFNSLCKFVSIPSSSHYDPISKDLREHCN 240
           DLISTEKDV LLV+AGVIINQIGGSDKEV+DLFN+ CKF++ P SS++D I KDL EHCN
Sbjct: 369 DLISTEKDVRLLVEAGVIINQIGGSDKEVADLFNNFCKFITAPKSSNFDSIIKDLCEHCN 428

Query: 241 GKWNKAKASLKHNYFNTPWAFISFFAASFLILLTLLQTIFSAISAF 282
           G+WN+AKASLKHNYFNTPWAFISFFAA+ LILLTLLQTIF+AI+ F
Sbjct: 429 GRWNRAKASLKHNYFNTPWAFISFFAATLLILLTLLQTIFTAITTF 460

BLAST of HG10004660 vs. TAIR 10
Match: AT4G31980.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). )

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-33
Identity = 92/280 (32.86%), Postives = 155/280 (55.36%), Query Frame = 0

Query: 3   LENQVPFFLLQHLYDLL---PEDSIPTLSLTNLTNFALCNGSLVDEYKDRFVPCSNIKPK 62
           +ENQ+PFF+++ ++ LL    +   P++      +F+     + DE   +F+     +P+
Sbjct: 425 IENQLPFFVVKEIFLLLLNYYQQGTPSIIQLAQRHFSYFLSRIDDE---KFI----TEPE 484

Query: 63  HLVDFLRFYFVPLPLPIPDDMQLKKKHENKKPHVENSEKEENCPSITEIYEAGVIIKKAE 122
           H VD LR  ++P          +K ++         + K +N P  TE++ AGV  K AE
Sbjct: 485 HFVDLLRSCYLP-------QFPIKLEY--------TTVKVDNAPEATELHTAGVRFKPAE 544

Query: 123 NSQLITNISFKNGVLEIPPLDIYDDFEIYLRNLIAFEHFPVEDKNNYAIQYVSFLDDLIS 182
            S  + +ISF +GVL+IP + + D  E   +N+I FE     +KN   + Y+  L   I 
Sbjct: 545 TSSCLLDISFADGVLKIPTIVVDDLTESLYKNIIGFEQCRCSNKN--FLDYIMLLGCFIK 604

Query: 183 TEKDVCLLVKAGVIINQIGGSDKEVSDLFNSLCKFVSIPSSSHYDPISKDLREHCNGKWN 242
           +  D  LL+ +G+I+N +G S  +VS+LFNS+ K V      ++  +S++L+ +CN  WN
Sbjct: 605 SPTDADLLIHSGIIVNYLGNS-VDVSNLFNSISKEVIYDRRFYFSMLSENLQAYCNTPWN 664

Query: 243 KAKASLKHNYFNTPWAFISFFAASFLILLTLLQTIFSAIS 280
           + KA L+ +YF+ PWA  S FAA  L+LLT +Q++ S ++
Sbjct: 665 RWKAILRRDYFHNPWAVASVFAALLLLLLTFIQSVCSILA 679

BLAST of HG10004660 vs. TAIR 10
Match: AT3G50170.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 136.3 bits (342), Expect = 3.8e-32
Identity = 85/211 (40.28%), Postives = 125/211 (59.24%), Query Frame = 0

Query: 75  PIPDDMQLKKKHENKKPHVENSEKEENCPSITEIYEAGVIIKKAENSQLITNISFKNGVL 134
           P P+   L K+   +   V +  +++    +TE+ EAGV  +K +  +   +I FKNG L
Sbjct: 332 PTPNTRSLLKR-LTRNTRVVDKRQQQLVHCVTELREAGVKFRKRKTDR-FWDIEFKNGYL 391

Query: 135 EIPPLDIYDDFEIYLRNLIAFEHFPVEDKNNYAIQYVSFLDDLISTEKDVCLLVKAGVII 194
           EIP L I+D  +    NLIAFE   +E  +N+   Y+ F+D+LI++ +DV  L   G+I 
Sbjct: 392 EIPKLLIHDGTKSLFSNLIAFEQCHIE-SSNHITSYIIFMDNLINSSEDVSYLHYCGIIE 451

Query: 195 NQIGGSDKEVSDLFNSLCKFVSI-PSSSHYDPISKDLREHCNGKWNKAKASLKHNYFNTP 254
           + + GSD EV+DLFN LC+ V   P  SH   +S D+  + N KWN  KA+L H YFN P
Sbjct: 452 HWL-GSDSEVADLFNRLCQEVVFDPKDSHLSRLSGDVNRYYNRKWNVLKATLTHKYFNNP 511

Query: 255 WAFISFFAASFLILLTLLQTIFSAISAF-PN 284
           WA+ SF AA  L+LLTL Q+ ++  + + PN
Sbjct: 512 WAYFSFSAAVILLLLTLCQSFYAVYAYYKPN 538

BLAST of HG10004660 vs. TAIR 10
Match: AT3G50140.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 133.3 bits (334), Expect = 3.2e-31
Identity = 98/300 (32.67%), Postives = 152/300 (50.67%), Query Frame = 0

Query: 1   MKLENQVPFFLLQHLYDL-----------------LPEDSIPT-LSLTNLTNFALCNGSL 60
           + LENQ+P F+L  L +L                      +PT +S T + N    N   
Sbjct: 246 LMLENQLPLFVLNRLLELQLGTQYQTGLVAQLAVRFFNPLMPTYMSSTKIENSQENNNKF 305

Query: 61  VDEYKDRFVPCSNIKPKHLVDFLRFYFVPLPLPIPDDMQLKKKHENKKPHVENSEKEENC 120
            +   D+       +  H +D  R     L   +  D +L +   ++KP V +  +++  
Sbjct: 306 FNPIADK-----EKEELHCLDVFRRSL--LQPSLKPDPRLSRSRWSRKPLVADKRQQQLL 365

Query: 121 PSITEIYEAGVIIKKAENSQLITNISFKNGVLEIPPLDIYDDFEIYLRNLIAFEHFPVED 180
             +TE+ EAG+  K+   S    +I FKNG LEIP L I+D  +    NLIA+E   + D
Sbjct: 366 HCVTELREAGIKFKR-RKSDRFWDIQFKNGCLEIPKLLIHDGTKSLFSNLIAYEQCHI-D 425

Query: 181 KNNYAIQYVSFLDDLISTEKDVCLLVKAGVIINQIGGSDKEVSDLFNSLCKFVSIPSSSH 240
             N    Y+ F+D+LI + +D+  L    +I + + G+D EV+D+FN LC+ V+    + 
Sbjct: 426 STNDITSYIIFMDNLIDSAEDIRYLHYYDIIEHWL-GNDSEVADVFNRLCQEVAFDLENT 485

Query: 241 Y-DPISKDLREHCNGKWNKAKASLKHNYFNTPWAFISFFAASFLILLTLLQTIFSAISAF 282
           Y   +S  +  + N KWN  KA+LKH YF+ PWA+ SFFAA  L+LLTL Q+ F++   F
Sbjct: 486 YLSELSNKVDRYYNRKWNVLKATLKHKYFSNPWAYFSFFAAVILLLLTLFQSFFTSYPYF 535

BLAST of HG10004660 vs. TAIR 10
Match: AT5G11290.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 130.6 bits (327), Expect = 2.1e-30
Identity = 97/282 (34.40%), Postives = 144/282 (51.06%), Query Frame = 0

Query: 1   MKLENQVPFFLLQHLYDLLPED---SIPTLSLTNLTNFALCNGSLVDEYKDRFVPCSNIK 60
           M LENQ+P+F+++ ++ LL  D    +P L+     +F     S+    +      S+ K
Sbjct: 94  MLLENQLPYFVVEGMFGLLHVDYHRELPPLTRIIHNHFKKFWMSIPSFSRS----ISDSK 153

Query: 61  PKHLVDFLRFYFVPLPLPIPDDMQLKKKHENKKPHVENSEKEENCPSITEIYEAGVIIKK 120
             H VD LR   +PL L  P                 +    ++  S  EI  AGV ++ 
Sbjct: 154 ICHFVDLLRSIHLPLVLSFPGG---------------SMRMMDSVLSAKEIQNAGVKLQP 213

Query: 121 AENSQLITNISFKNGVLEIPPLDIYDDFEIYLRNLIAFEHFPVEDKNNYAIQYVSFLDDL 180
           A+N+    +ISF NGVL IP + I D  E   RN+I FE     D   Y I Y+ FL   
Sbjct: 214 ADNNTCALDISFANGVLTIPKIKINDITESLYRNIILFEQCHRLDA--YFIHYMRFLSCF 273

Query: 181 ISTEKDVCLLVKAGVIINQIGGSDKEVSDLFNSLCKFVSIPSSSHYDPISKDLREHCNGK 240
           I +  D  L +  G+I+N+ G ++ +VS LFNS+ K  S  S  +Y  +  +L+ HCN  
Sbjct: 274 IRSPMDAELFIDHGIIVNRFGNAE-DVSRLFNSILKETSY-SGFYYKTVYGNLQAHCNAP 333

Query: 241 WNKAKASLKHNYFNTPWAFISFFAASFLILLTLLQTIFSAIS 280
           WNK KA+L+ +YF+ PW+  S  AA  L+LLT +Q I S ++
Sbjct: 334 WNKWKATLRRDYFHNPWSAASVVAACVLLLLTFVQAICSILA 352

BLAST of HG10004660 vs. TAIR 10
Match: AT3G50130.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 129.4 bits (324), Expect = 4.7e-30
Identity = 101/293 (34.47%), Postives = 152/293 (51.88%), Query Frame = 0

Query: 3   LENQVPFFLLQHLYDLLPEDSIPTLSLTNLTNFALCNGSLVDE---------YKDRFVPC 62
           LENQ+P F+L  L ++       T  ++ L           DE          +D+F   
Sbjct: 274 LENQLPLFVLNRLLEIQLGKRHQTGLVSRLAVRFFDPLMPTDEPLTKTDDSLEQDKFFNP 333

Query: 63  SNIKPK---HLVD-FLRFYFVPLPLPIPDDMQLKKKHENKKPHVENSEKEENCPSITEIY 122
              K K   H +D F R    P   P P   +L +   + +  V +  +++    +TE+ 
Sbjct: 334 IADKDKGELHCLDVFRRNLLRPCSNPEP---RLSRMRWSWRTRVADKRQQQLIHCVTELR 393

Query: 123 EAGVIIKKAENSQLITNISFKNGVLEIPPLDIYDDFEIYLRNLIAFEHFPVEDKNNYAIQ 182
           EAG+  +  +  +   +I FKNG LEIP L I+D  +    NLIAFE   + D +N    
Sbjct: 394 EAGIKFRTRKTDR-FWDIRFKNGYLEIPKLLIHDGTKSLFSNLIAFEQCHI-DSSNDITS 453

Query: 183 YVSFLDDLISTEKDVCLLVKAGVIINQIGGSDKEVSDLFNSLCKFVSI-PSSSHYDPISK 242
           Y+ F+D+LI + +DV  L   G+I + + G+D EV+DLFN LC+ V+  P +S+   +S 
Sbjct: 454 YIIFMDNLIDSSEDVRYLHYCGIIEHWL-GNDYEVADLFNRLCQEVAFDPQNSYLSQLSN 513

Query: 243 DLREHCNGKWNKAKASLKHNYFNTPWAFISFFAASFLILLTLLQTIFSAISAF 282
            +  + + KWN  KA LKH YFN PWA+ SFFAA  L++LTL Q+ F+A   F
Sbjct: 514 KVDRNYSRKWNVLKAILKHKYFNNPWAYFSFFAALVLLVLTLFQSFFTAYPYF 560

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038890800.11.7e-9064.48UPF0481 protein At3g47200-like [Benincasa hispida][more]
XP_038886585.12.9e-8258.33UPF0481 protein At3g47200-like [Benincasa hispida][more]
XP_038884451.15.4e-8158.90UPF0481 protein At3g47200-like [Benincasa hispida] >XP_038884452.1 UPF0481 prote... [more]
KAA0064946.13.5e-8057.56UPF0481 protein [Cucumis melo var. makuwa][more]
KAA0064941.11.0e-7956.31UPF0481 protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Q9SD531.5e-2029.83UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A5A7VF391.7e-8057.56UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00265... [more]
A0A5A7VGS65.0e-8056.31UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00259... [more]
A0A1S3BD295.0e-8057.42LOW QUALITY PROTEIN: UPF0481 protein At3g47200-like OS=Cucumis melo OX=3656 GN=L... [more]
A0A5A7V9V01.1e-7959.44UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00261... [more]
A0A1S3BCY51.4e-7959.44UPF0481 protein At3g47200-like OS=Cucumis melo OX=3656 GN=LOC103488292 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G31980.11.2e-3332.86unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247,... [more]
AT3G50170.13.8e-3240.28Plant protein of unknown function (DUF247) [more]
AT3G50140.13.2e-3132.67Plant protein of unknown function (DUF247) [more]
AT5G11290.12.1e-3034.40Plant protein of unknown function (DUF247) [more]
AT3G50130.14.7e-3034.47Plant protein of unknown function (DUF247) [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004158Protein of unknown function DUF247, plantPFAMPF03140DUF247coord: 3..268
e-value: 3.5E-65
score: 220.8
NoneNo IPR availablePANTHERPTHR31170BNAC04G53230D PROTEINcoord: 2..279
NoneNo IPR availablePANTHERPTHR31170:SF13BNAC04G53230D PROTEINcoord: 2..279

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10004660.1HG10004660.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane