Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTTCACTTCAAAGCACTTTTGTCAAAAGGTTTTTCCCCTCTTCATGATGTTATTGGAACGCTTGCAATGATGTTTTAGAGTGATTAAATGTGTGTTTCGGAGTGATTTTAGATATGAAAAAAAATGATTTTAACCGTTTCAAAATCACTCTCAAACATGCACTTAGAATGCTTTCACTTCAAAGCACTTTAATAAAAAAGTTCTTTTTTTTGTCCTCTCTTCATGATGCTATCGAAATGCTTGCAATGACGTTTTGGAGTGATTAAATGATTGATTTTGAGTGATAAGAGGTGTGTTTCAAGGTGATTTTAGATATGGCAAAAGTGATTTCAACCGTTTCAAAATCACTCTCAAACCTGCACTTAAAATGCTTTCACTTCAAAGCACTTTAGTCAAAAAAAAAAAAAAAAAAAAAAAAAATTCCTCTTCATGATGTTATTTGAAACACTTGCAATGGGGTTTGAAAATGCAGGTAAATGCTAGAAGTCTCAAAGCTTAAGAAGCTAAGCTGAATGGCAACAACTAAAGCAAAAGAAAGCTGTGGTTTGGGGAAGGAAAGGAAGATCACAGCTCCAAGTTCTGTCACAATTCCTAATAATACTCCAACCAAAAGAACTCCAAAATCATCTCCTAGAGGCATTATTTCTTCCACTGATCCAAAACTTTCTTCTTTTTCTTCTTCTTCTTCTTCTCCTTCTTCCTCTTCTTCCTCTGCTCCTTCCCTTTCCATTCTCCCCGAAAAACACGTCCCGAATTATCTCAAATCGACAGCCAGCTCCCGCCATGACCATAACTTCAGGCCAATAACCAAGAGTAAGTCTGGCCCTGCACCAATACCTGAGGGCAAACCTAGTTTGAATAGAAGAAGATCTTTCGATAAACCTCCCCCGACCGCACCCCGTTTGGAGAAGCCGTTTCGATCGCCTGGACCAAGGAATCGGGCTGGTCATGTTCCGGTCCGGTCGTCCTCTTTTGGGGCTAAACCCTCCACCACCACCACCACCACCAACACAATTGTCAATTCTACAAAGCCTGGTTTATTGGAGAGATCATCTTCTAAAGTCTCTAAAGTTGGAGGGAAACCACAACAACCAATTCAGGCTTTGAAAAGTAGCACTAGTAATGTAAAGAAAAGCTTGAAAAGAGAACCTAGCAATGCTGCTTCTGCTTCTGCTTCTGCTTCTGTTTCAGCTTCTGCTTCAGCAGAAATGATTCCCAAGACTAAGAATGCTATTGAACATGTAGATCAAAGTCCTTCTTTCGTTCTCGGTGTTAACGAAGAAGATTTAAAAAAGATCGAGTGCGAACTCGATCCGTATCTTCCTGATCCAATGCCTGAATTGGACAAACAACTCAGAATTGATCAGGTGGAAAAGAATGAGACTGATGACACAGAGAACTTCAAAGTAGTTGTTACTAATAAAGAGGTGGAGGAAGAAACTCCAGAGGCAGCTCAGACTGAAATGTCGTTAATGAATCGAGAACAAAACGAAGCGGAAGGAGACGAGGAGAAAACAGAGAGAATTACAGTGGAAAAAGAGGAAGTTATTGCATCAGAGGAAAACACAAACAACAAGAATGATCAAGAGAAGAGTGAAACAGATCCTATTTTAGATGGGGAGAGTTACAAGGAAGAAAATGATCACAAGGCGACCGAGACAACGGAGAAAGAAGGCGAAGCGACCGACAAAGTGGCGGCGGCAGTGGCAGCAGCAAAACCGCAACAAGGAGGACCGGCGAGAAAAGAGTCTCCAGCAATGTACAATCATGTAATAGAGGAGACAGCAAGTAAGCTTTTGGAAAAGAGGAAGAACAAGGTAAGAGCATTGGCTGGGGCATTTCAGACAGTCATTGATTATGAATCTTCATCTAAATGA
mRNA sequence
ATGCTTTCACTTCAAAGCACTTTTGTCAAAAGGCCAATAACCAAGAGTAAGTCTGGCCCTGCACCAATACCTGAGGGCAAACCTAGTTTGAATAGAAGAAGATCTTTCGATAAACCTCCCCCGACCGCACCCCGTTTGGAGAAGCCGTTTCGATCGCCTGGACCAAGGAATCGGGCTGGTCATGTTCCGGTCCGGTCGTCCTCTTTTGGGGCTAAACCCTCCACCACCACCACCACCACCAACACAATTGTCAATTCTACAAAGCCTGGTTTATTGGAGAGATCATCTTCTAAAGTCTCTAAAGTTGGAGGGAAACCACAACAACCAATTCAGGCTTTGAAAAGTAGCACTAGTAATGTAAAGAAAAGCTTGAAAAGAGAACCTAGCAATGCTGCTTCTGCTTCTGCTTCTGCTTCTGTTTCAGCTTCTGCTTCAGCAGAAATGATTCCCAAGACTAAGAATGCTATTGAACATGTAGATCAAAGTCCTTCTTTCGTTCTCGGTGTTAACGAAGAAGATTTAAAAAAGATCGAGTGCGAACTCGATCCGTATCTTCCTGATCCAATGCCTGAATTGGACAAACAACTCAGAATTGATCAGGTGGAAAAGAATGAGACTGATGACACAGAGAACTTCAAAGTAGTTGTTACTAATAAAGAGGTGGAGGAAGAAACTCCAGAGGCAGCTCAGACTGAAATGTCGTTAATGAATCGAGAACAAAACGAAGCGGAAGGAGACGAGGAGAAAACAGAGAGAATTACAGTGGAAAAAGAGGAAGTTATTGCATCAGAGGAAAACACAAACAACAAGAATGATCAAGAGAAGAGTGAAACAGATCCTATTTTAGATGGGGAGAGTTACAAGGAAGAAAATGATCACAAGGCGACCGAGACAACGGAGAAAGAAGGCGAAGCGACCGACAAAGTGGCGGCGGCAGTGGCAGCAGCAAAACCGCAACAAGGAGGACCGGCGAGAAAAGAGTCTCCAGCAATGTACAATCATGTAATAGAGGAGACAGCAAGTAAGCTTTTGGAAAAGAGGAAGAACAAGGTAAGAGCATTGGCTGGGGCATTTCAGACAGTCATTGATTATGAATCTTCATCTAAATGA
Coding sequence (CDS)
ATGCTTTCACTTCAAAGCACTTTTGTCAAAAGGCCAATAACCAAGAGTAAGTCTGGCCCTGCACCAATACCTGAGGGCAAACCTAGTTTGAATAGAAGAAGATCTTTCGATAAACCTCCCCCGACCGCACCCCGTTTGGAGAAGCCGTTTCGATCGCCTGGACCAAGGAATCGGGCTGGTCATGTTCCGGTCCGGTCGTCCTCTTTTGGGGCTAAACCCTCCACCACCACCACCACCACCAACACAATTGTCAATTCTACAAAGCCTGGTTTATTGGAGAGATCATCTTCTAAAGTCTCTAAAGTTGGAGGGAAACCACAACAACCAATTCAGGCTTTGAAAAGTAGCACTAGTAATGTAAAGAAAAGCTTGAAAAGAGAACCTAGCAATGCTGCTTCTGCTTCTGCTTCTGCTTCTGTTTCAGCTTCTGCTTCAGCAGAAATGATTCCCAAGACTAAGAATGCTATTGAACATGTAGATCAAAGTCCTTCTTTCGTTCTCGGTGTTAACGAAGAAGATTTAAAAAAGATCGAGTGCGAACTCGATCCGTATCTTCCTGATCCAATGCCTGAATTGGACAAACAACTCAGAATTGATCAGGTGGAAAAGAATGAGACTGATGACACAGAGAACTTCAAAGTAGTTGTTACTAATAAAGAGGTGGAGGAAGAAACTCCAGAGGCAGCTCAGACTGAAATGTCGTTAATGAATCGAGAACAAAACGAAGCGGAAGGAGACGAGGAGAAAACAGAGAGAATTACAGTGGAAAAAGAGGAAGTTATTGCATCAGAGGAAAACACAAACAACAAGAATGATCAAGAGAAGAGTGAAACAGATCCTATTTTAGATGGGGAGAGTTACAAGGAAGAAAATGATCACAAGGCGACCGAGACAACGGAGAAAGAAGGCGAAGCGACCGACAAAGTGGCGGCGGCAGTGGCAGCAGCAAAACCGCAACAAGGAGGACCGGCGAGAAAAGAGTCTCCAGCAATGTACAATCATGTAATAGAGGAGACAGCAAGTAAGCTTTTGGAAAAGAGGAAGAACAAGGTAAGAGCATTGGCTGGGGCATTTCAGACAGTCATTGATTATGAATCTTCATCTAAATGA
Protein sequence
MLSLQSTFVKRPITKSKSGPAPIPEGKPSLNRRRSFDKPPPTAPRLEKPFRSPGPRNRAGHVPVRSSSFGAKPSTTTTTTNTIVNSTKPGLLERSSSKVSKVGGKPQQPIQALKSSTSNVKKSLKREPSNAASASASASVSASASAEMIPKTKNAIEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQLRIDQVEKNETDDTENFKVVVTNKEVEEETPEAAQTEMSLMNREQNEAEGDEEKTERITVEKEEVIASEENTNNKNDQEKSETDPILDGESYKEENDHKATETTEKEGEATDKVAAAVAAAKPQQGGPARKESPAMYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK
Homology
BLAST of HG10004604 vs. NCBI nr
Match:
XP_038886465.1 (uncharacterized protein CG45076 [Benincasa hispida])
HSP 1 Score: 530.4 bits (1365), Expect = 1.2e-146
Identity = 307/368 (83.42%), Postives = 326/368 (88.59%), Query Frame = 0
Query: 11 RPITKSKSGPAPIPEGKPSLNRRRSFDKPPPTAPRLEKPFRSPGPRNRAGHVPVRSSSFG 70
+P+T+SKSGPAPIPEGKPSLNRRRSFDKPP TAPRL KPFRSPGPRNRA HVPVRSSSFG
Sbjct: 94 KPVTRSKSGPAPIPEGKPSLNRRRSFDKPPSTAPRLGKPFRSPGPRNRAAHVPVRSSSFG 153
Query: 71 AKPSTTTTTTNTIVNSTKPGLLERSSSKVSKVGGKPQQPIQALKSSTSNVKKSLKREPSN 130
AKPSTT TIVNSTKPG L+RSSSK+SKVGGKPQQPI +LKSS SNVKKSLKRE SN
Sbjct: 154 AKPSTT-----TIVNSTKPGFLDRSSSKISKVGGKPQQPIHSLKSSNSNVKKSLKRESSN 213
Query: 131 A---ASASASASVSASASAEMIPKTKNAIEHVDQSPSFVLGVNEEDLKKIECELDPYLPD 190
A AS SASAS SASASAE++PKTKNA+EHVD SPSFVLGVNEEDLKKIECELDPYLPD
Sbjct: 214 AAASASVSASASASASASAEIVPKTKNAVEHVDHSPSFVLGVNEEDLKKIECELDPYLPD 273
Query: 191 PMPELDKQLRIDQVEK-----NETDDTENFKVVVTNKEVEEETPEAAQTEMSLMNREQNE 250
PMPELDKQLRIDQVEK + DTE FKVVV NKEV EE PEAA+TE+SL NRE++E
Sbjct: 274 PMPELDKQLRIDQVEKKAVLDKDEADTETFKVVVANKEV-EEIPEAAETEISLTNRERDE 333
Query: 251 AEGDEEKTERITVEKEEVIASEE-NTNNKNDQEKSETDPILDGESYKEENDHKATETTEK 310
EG+EEK ERI VEKEEV+ SEE NTNNKNDQEKSETDP+LDGESYKEENDHKA ETTEK
Sbjct: 334 VEGEEEKPERIAVEKEEVVGSEEINTNNKNDQEKSETDPVLDGESYKEENDHKAAETTEK 393
Query: 311 EGEATDKVAAAVAAAKPQQGGPARKESPAMYNHVIEETASKLLEKRKNKVRALAGAFQTV 370
E EAT+K AAAV AKP+QGGP RKESPAMYNHVIEETASKLLEKRKNKVRALAGAFQTV
Sbjct: 394 EAEATEKAAAAV-VAKPRQGGPGRKESPAMYNHVIEETASKLLEKRKNKVRALAGAFQTV 453
BLAST of HG10004604 vs. NCBI nr
Match:
KAA0064998.1 (serine/arginine repetitive matrix protein 1 [Cucumis melo var. makuwa])
HSP 1 Score: 486.9 bits (1252), Expect = 1.6e-133
Identity = 291/373 (78.02%), Postives = 316/373 (84.72%), Query Frame = 0
Query: 11 RPITKSKSGPAPIPEGKPSLNRRRSFDKPPPTAPRLEKPFRSPGPRNRAGHVPVRSSSFG 70
+PIT+SKSGPAPIPEGKPSLNRRRSFDKPPPTAPRLEKPFRSPGPRNRA HVPVRSSSFG
Sbjct: 93 KPITRSKSGPAPIPEGKPSLNRRRSFDKPPPTAPRLEKPFRSPGPRNRATHVPVRSSSFG 152
Query: 71 AKPSTTTTTTNTIVNSTKPGLLERSSSKVSKVGGKPQQPIQALKSSTSNVKKSLKREPSN 130
AKPST+TT I +STKPG LERSSSK+SKVGGKPQ PIQ+LK+S+S+VKKSL+RE SN
Sbjct: 153 AKPSTSTT---IIGHSTKPGFLERSSSKISKVGGKPQPPIQSLKTSSSHVKKSLRRESSN 212
Query: 131 AASASASASVSASASAEMIPKTKNAIEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMP 190
A ASAS SASASAE++PKTKNA+EHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMP
Sbjct: 213 VA---ASASASASASAEIVPKTKNAVEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMP 272
Query: 191 ELDKQLRIDQVEK-----NETDDTENFKVVVTNKEVEE-ETPEAAQTEMSLMNREQNEAE 250
ELDKQ+RIDQVEK + DTE KVVVTNKEVEE ETP A+TE+SL NREQNE E
Sbjct: 273 ELDKQVRIDQVEKKAALDKDETDTEILKVVVTNKEVEEKETPGTAETEISLANREQNEGE 332
Query: 251 GDEEKTE----RITVEKEEVIASEENTNNKNDQEKSETDPILDGESYKEENDH----KAT 310
+E K E RI VEKEEV+A EE+ NNKNDQEKSETD +LDGES KEEND KA
Sbjct: 333 EEEPKEEDKPKRIGVEKEEVLALEESINNKNDQEKSETDSVLDGESCKEENDQNSTPKAA 392
Query: 311 ETTEKEGEATDKVAAAVAAAKPQQGGPARKESPAMYNHVIEETASKLLEKRKNKVRALAG 370
ETTEKE E+T+K AKP+QG P RKESPA+YNHVIEETASKLLEKRKNKVRALAG
Sbjct: 393 ETTEKEAESTEK------TAKPRQGAPGRKESPAVYNHVIEETASKLLEKRKNKVRALAG 452
BLAST of HG10004604 vs. NCBI nr
Match:
XP_011649760.1 (neurofilament heavy polypeptide [Cucumis sativus] >KGN62866.1 hypothetical protein Csa_021828 [Cucumis sativus])
HSP 1 Score: 484.2 bits (1245), Expect = 1.0e-132
Identity = 290/377 (76.92%), Postives = 316/377 (83.82%), Query Frame = 0
Query: 11 RPITKSKSGPAPIPEGKPSLNRRRSFDKPPPTAPRLEKPFRSPGPRNRAGHVPVRSSSFG 70
+PI +SKSGPAPIPEG+PSLNRRRSFDKPPPT PRL KPFRSPGPRNR HVPVRSSSFG
Sbjct: 95 KPIARSKSGPAPIPEGRPSLNRRRSFDKPPPTVPRLGKPFRSPGPRNRTPHVPVRSSSFG 154
Query: 71 AKPSTTTTTTNTIVNSTKPGLLERSSSKVSKVGGKPQQPIQALKSSTSNVKKSLKREPSN 130
AKPSTTTT TI +STKPG LERSSSK SKVGGKPQ PIQ+LK+S+S VKKSL+RE SN
Sbjct: 155 AKPSTTTT---TIGHSTKPGFLERSSSKSSKVGGKPQPPIQSLKTSSSYVKKSLRRESSN 214
Query: 131 A---ASASASASVSASASAEMIPKTKNAIEHVDQSPSFVLGVNEEDLKKIECELDPYLPD 190
A ASASASAS SASASAE++PK+KNA+EHVDQSPSFVLGVNEEDLKKIECELDPYLPD
Sbjct: 215 AAASASASASASASASASAEIVPKSKNAVEHVDQSPSFVLGVNEEDLKKIECELDPYLPD 274
Query: 191 PMPELDKQLRIDQVEK-----NETDDTENFKVVVTNKEVEE--ETPEAAQTEMSLMNREQ 250
PMPELDKQ+R+DQVEK + DTE KVVVTNKEVEE ETP +TE+SL N+EQ
Sbjct: 275 PMPELDKQIRLDQVEKKAVLDKDETDTEILKVVVTNKEVEEQKETPRTVETEISLANQEQ 334
Query: 251 NEAEGDEEKTE----RITVEKEEVIASEENTNNKNDQEKSETDPILDGESYKEENDH--- 310
NE EG+E K E RI VEKEEV+A EE+ NNKNDQEKSETD +LDGES KEE+D
Sbjct: 335 NEREGEEPKEEDNPKRIEVEKEEVVALEESINNKNDQEKSETDSVLDGESCKEESDQNST 394
Query: 311 -KATETTEKEGEATDKVAAAVAAAKPQQGGPARKESPAMYNHVIEETASKLLEKRKNKVR 370
KA ETTEKE E+T+K AKP+QGGP RKESPAMYNHVIEETASKLLEKRKNKVR
Sbjct: 395 PKAAETTEKEAESTEK------TAKPRQGGPGRKESPAMYNHVIEETASKLLEKRKNKVR 454
BLAST of HG10004604 vs. NCBI nr
Match:
XP_008445084.1 (PREDICTED: serine/arginine repetitive matrix protein 1 [Cucumis melo])
HSP 1 Score: 483.8 bits (1244), Expect = 1.3e-132
Identity = 289/373 (77.48%), Postives = 314/373 (84.18%), Query Frame = 0
Query: 11 RPITKSKSGPAPIPEGKPSLNRRRSFDKPPPTAPRLEKPFRSPGPRNRAGHVPVRSSSFG 70
+PIT+SKSGPAPIPEGKPSLNRRRSFDKPPPTAPRLEKPFRSPGPRNRA HVPVRSSSFG
Sbjct: 93 KPITRSKSGPAPIPEGKPSLNRRRSFDKPPPTAPRLEKPFRSPGPRNRATHVPVRSSSFG 152
Query: 71 AKPSTTTTTTNTIVNSTKPGLLERSSSKVSKVGGKPQQPIQALKSSTSNVKKSLKREPSN 130
AKPST+TT I +STKPG LERSSSK+SKVGGKPQ PIQ+LK+S+S+VKKSL+RE SN
Sbjct: 153 AKPSTSTT---IIGHSTKPGFLERSSSKISKVGGKPQPPIQSLKTSSSHVKKSLRRESSN 212
Query: 131 AASASASASVSASASAEMIPKTKNAIEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMP 190
A AS SASASAE++PKTKNA+EHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMP
Sbjct: 213 VA-----ASASASASAEIVPKTKNAVEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMP 272
Query: 191 ELDKQLRIDQVEK-----NETDDTENFKVVVTNKEVEE-ETPEAAQTEMSLMNREQNEAE 250
ELDKQ+RIDQVEK + DTE KVVVTNKEVEE ETP A+TE+SL NREQNE E
Sbjct: 273 ELDKQVRIDQVEKKAALDKDETDTEILKVVVTNKEVEEKETPGTAETEISLANREQNEGE 332
Query: 251 GDEEKTE----RITVEKEEVIASEENTNNKNDQEKSETDPILDGESYKEENDH----KAT 310
+E K E RI VEKEEV+A EE+ NNKNDQEKSETD +LDGES KEEND KA
Sbjct: 333 EEEPKEEDKPKRIGVEKEEVLALEESINNKNDQEKSETDSVLDGESCKEENDQNSTPKAA 392
Query: 311 ETTEKEGEATDKVAAAVAAAKPQQGGPARKESPAMYNHVIEETASKLLEKRKNKVRALAG 370
ETTEKE E+T+K AKP+QG P RKESPA+YNHVIEETASKLLEKRKNKVRALAG
Sbjct: 393 ETTEKEAESTEK------TAKPRQGAPGRKESPAVYNHVIEETASKLLEKRKNKVRALAG 451
BLAST of HG10004604 vs. NCBI nr
Match:
XP_023546370.1 (cell wall protein RBR3-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 395.2 bits (1014), Expect = 6.2e-106
Identity = 265/398 (66.58%), Postives = 291/398 (73.12%), Query Frame = 0
Query: 11 RPITKSKSGPAPIPEGKPSLNRRRSFDKPPPTAPRLEKPFRSPGPRNRAGHVPVRSSSFG 70
+PI KS +GP PIPEGKPSLNRRRSFDKPPP RL KPFRSP PRNRA H PVRSSSFG
Sbjct: 93 KPIKKS-AGPTPIPEGKPSLNRRRSFDKPPPATQRLGKPFRSPEPRNRAAHAPVRSSSFG 152
Query: 71 AKPSTTTTTTNTIVNSTKPGLLERSSSKVSKVGGKPQQPIQALKSSTSNVKKSLKREPSN 130
AKPST TIV+STK G LERS SK+ KVGGK QQ +Q LKSS SNV+KSLKRE SN
Sbjct: 153 AKPST------TIVSSTKTGFLERSGSKIYKVGGKTQQSVQTLKSS-SNVRKSLKRESSN 212
Query: 131 AASASASASVSASASAEMIPKTKNAIEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMP 190
AASAS SAEM+PKTKNA+EHV QSP VLG NEEDLKKIECELD LPDP P
Sbjct: 213 AASAS---------SAEMVPKTKNAVEHVGQSPVLVLGANEEDLKKIECELDLCLPDPRP 272
Query: 191 ELDKQL-RIDQVEK-----NETDDTENFKVVVTNKEVEEETPEAAQTEMSLM------NR 250
ELDK+L DQVEK DT+ FKVV +NK+V EETP AA+T+ + NR
Sbjct: 273 ELDKELSTTDQVEKRLHHHQPIQDTKIFKVVGSNKKV-EETPGAAETDNAKSSIREDENR 332
Query: 251 EQNEAEG-----DEEKTERITVEKEE---VIASEENTNNKNDQEKSETDPIL-------- 310
EQNE EG +EEK ERI VEKEE V+ASEE+TNNKN++EKS TDPI
Sbjct: 333 EQNEGEGEEEAKEEEKPERIEVEKEEVFGVVASEESTNNKNEEEKSHTDPIQVGVIVLEH 392
Query: 311 ----DGESYKEENDHKATETTEKEGEATDKVAAA-------VAAAKPQQGGPARKESPAM 370
DG+S KEEN + +TEKE EAT+KVAAA AAAKP+QGGP RKESPA+
Sbjct: 393 KEVEDGQSSKEENHN----STEKEAEATEKVAAAAAAAAAEAAAAKPRQGGPGRKESPAV 452
BLAST of HG10004604 vs. ExPASy TrEMBL
Match:
A0A5A7VBK4 (Serine/arginine repetitive matrix protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003220 PE=4 SV=1)
HSP 1 Score: 486.9 bits (1252), Expect = 7.6e-134
Identity = 291/373 (78.02%), Postives = 316/373 (84.72%), Query Frame = 0
Query: 11 RPITKSKSGPAPIPEGKPSLNRRRSFDKPPPTAPRLEKPFRSPGPRNRAGHVPVRSSSFG 70
+PIT+SKSGPAPIPEGKPSLNRRRSFDKPPPTAPRLEKPFRSPGPRNRA HVPVRSSSFG
Sbjct: 93 KPITRSKSGPAPIPEGKPSLNRRRSFDKPPPTAPRLEKPFRSPGPRNRATHVPVRSSSFG 152
Query: 71 AKPSTTTTTTNTIVNSTKPGLLERSSSKVSKVGGKPQQPIQALKSSTSNVKKSLKREPSN 130
AKPST+TT I +STKPG LERSSSK+SKVGGKPQ PIQ+LK+S+S+VKKSL+RE SN
Sbjct: 153 AKPSTSTT---IIGHSTKPGFLERSSSKISKVGGKPQPPIQSLKTSSSHVKKSLRRESSN 212
Query: 131 AASASASASVSASASAEMIPKTKNAIEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMP 190
A ASAS SASASAE++PKTKNA+EHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMP
Sbjct: 213 VA---ASASASASASAEIVPKTKNAVEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMP 272
Query: 191 ELDKQLRIDQVEK-----NETDDTENFKVVVTNKEVEE-ETPEAAQTEMSLMNREQNEAE 250
ELDKQ+RIDQVEK + DTE KVVVTNKEVEE ETP A+TE+SL NREQNE E
Sbjct: 273 ELDKQVRIDQVEKKAALDKDETDTEILKVVVTNKEVEEKETPGTAETEISLANREQNEGE 332
Query: 251 GDEEKTE----RITVEKEEVIASEENTNNKNDQEKSETDPILDGESYKEENDH----KAT 310
+E K E RI VEKEEV+A EE+ NNKNDQEKSETD +LDGES KEEND KA
Sbjct: 333 EEEPKEEDKPKRIGVEKEEVLALEESINNKNDQEKSETDSVLDGESCKEENDQNSTPKAA 392
Query: 311 ETTEKEGEATDKVAAAVAAAKPQQGGPARKESPAMYNHVIEETASKLLEKRKNKVRALAG 370
ETTEKE E+T+K AKP+QG P RKESPA+YNHVIEETASKLLEKRKNKVRALAG
Sbjct: 393 ETTEKEAESTEK------TAKPRQGAPGRKESPAVYNHVIEETASKLLEKRKNKVRALAG 452
BLAST of HG10004604 vs. ExPASy TrEMBL
Match:
A0A0A0LS85 (CaM_binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G378000 PE=4 SV=1)
HSP 1 Score: 484.2 bits (1245), Expect = 4.9e-133
Identity = 290/377 (76.92%), Postives = 316/377 (83.82%), Query Frame = 0
Query: 11 RPITKSKSGPAPIPEGKPSLNRRRSFDKPPPTAPRLEKPFRSPGPRNRAGHVPVRSSSFG 70
+PI +SKSGPAPIPEG+PSLNRRRSFDKPPPT PRL KPFRSPGPRNR HVPVRSSSFG
Sbjct: 95 KPIARSKSGPAPIPEGRPSLNRRRSFDKPPPTVPRLGKPFRSPGPRNRTPHVPVRSSSFG 154
Query: 71 AKPSTTTTTTNTIVNSTKPGLLERSSSKVSKVGGKPQQPIQALKSSTSNVKKSLKREPSN 130
AKPSTTTT TI +STKPG LERSSSK SKVGGKPQ PIQ+LK+S+S VKKSL+RE SN
Sbjct: 155 AKPSTTTT---TIGHSTKPGFLERSSSKSSKVGGKPQPPIQSLKTSSSYVKKSLRRESSN 214
Query: 131 A---ASASASASVSASASAEMIPKTKNAIEHVDQSPSFVLGVNEEDLKKIECELDPYLPD 190
A ASASASAS SASASAE++PK+KNA+EHVDQSPSFVLGVNEEDLKKIECELDPYLPD
Sbjct: 215 AAASASASASASASASASAEIVPKSKNAVEHVDQSPSFVLGVNEEDLKKIECELDPYLPD 274
Query: 191 PMPELDKQLRIDQVEK-----NETDDTENFKVVVTNKEVEE--ETPEAAQTEMSLMNREQ 250
PMPELDKQ+R+DQVEK + DTE KVVVTNKEVEE ETP +TE+SL N+EQ
Sbjct: 275 PMPELDKQIRLDQVEKKAVLDKDETDTEILKVVVTNKEVEEQKETPRTVETEISLANQEQ 334
Query: 251 NEAEGDEEKTE----RITVEKEEVIASEENTNNKNDQEKSETDPILDGESYKEENDH--- 310
NE EG+E K E RI VEKEEV+A EE+ NNKNDQEKSETD +LDGES KEE+D
Sbjct: 335 NEREGEEPKEEDNPKRIEVEKEEVVALEESINNKNDQEKSETDSVLDGESCKEESDQNST 394
Query: 311 -KATETTEKEGEATDKVAAAVAAAKPQQGGPARKESPAMYNHVIEETASKLLEKRKNKVR 370
KA ETTEKE E+T+K AKP+QGGP RKESPAMYNHVIEETASKLLEKRKNKVR
Sbjct: 395 PKAAETTEKEAESTEK------TAKPRQGGPGRKESPAMYNHVIEETASKLLEKRKNKVR 454
BLAST of HG10004604 vs. ExPASy TrEMBL
Match:
A0A1S3BBU4 (serine/arginine repetitive matrix protein 1 OS=Cucumis melo OX=3656 GN=LOC103488229 PE=4 SV=1)
HSP 1 Score: 483.8 bits (1244), Expect = 6.4e-133
Identity = 289/373 (77.48%), Postives = 314/373 (84.18%), Query Frame = 0
Query: 11 RPITKSKSGPAPIPEGKPSLNRRRSFDKPPPTAPRLEKPFRSPGPRNRAGHVPVRSSSFG 70
+PIT+SKSGPAPIPEGKPSLNRRRSFDKPPPTAPRLEKPFRSPGPRNRA HVPVRSSSFG
Sbjct: 93 KPITRSKSGPAPIPEGKPSLNRRRSFDKPPPTAPRLEKPFRSPGPRNRATHVPVRSSSFG 152
Query: 71 AKPSTTTTTTNTIVNSTKPGLLERSSSKVSKVGGKPQQPIQALKSSTSNVKKSLKREPSN 130
AKPST+TT I +STKPG LERSSSK+SKVGGKPQ PIQ+LK+S+S+VKKSL+RE SN
Sbjct: 153 AKPSTSTT---IIGHSTKPGFLERSSSKISKVGGKPQPPIQSLKTSSSHVKKSLRRESSN 212
Query: 131 AASASASASVSASASAEMIPKTKNAIEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMP 190
A AS SASASAE++PKTKNA+EHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMP
Sbjct: 213 VA-----ASASASASAEIVPKTKNAVEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMP 272
Query: 191 ELDKQLRIDQVEK-----NETDDTENFKVVVTNKEVEE-ETPEAAQTEMSLMNREQNEAE 250
ELDKQ+RIDQVEK + DTE KVVVTNKEVEE ETP A+TE+SL NREQNE E
Sbjct: 273 ELDKQVRIDQVEKKAALDKDETDTEILKVVVTNKEVEEKETPGTAETEISLANREQNEGE 332
Query: 251 GDEEKTE----RITVEKEEVIASEENTNNKNDQEKSETDPILDGESYKEENDH----KAT 310
+E K E RI VEKEEV+A EE+ NNKNDQEKSETD +LDGES KEEND KA
Sbjct: 333 EEEPKEEDKPKRIGVEKEEVLALEESINNKNDQEKSETDSVLDGESCKEENDQNSTPKAA 392
Query: 311 ETTEKEGEATDKVAAAVAAAKPQQGGPARKESPAMYNHVIEETASKLLEKRKNKVRALAG 370
ETTEKE E+T+K AKP+QG P RKESPA+YNHVIEETASKLLEKRKNKVRALAG
Sbjct: 393 ETTEKEAESTEK------TAKPRQGAPGRKESPAVYNHVIEETASKLLEKRKNKVRALAG 451
BLAST of HG10004604 vs. ExPASy TrEMBL
Match:
A0A6J1K599 (microtubule-associated protein RP/EB family member 1-like OS=Cucurbita maxima OX=3661 GN=LOC111492415 PE=4 SV=1)
HSP 1 Score: 394.0 bits (1011), Expect = 6.7e-106
Identity = 263/395 (66.58%), Postives = 292/395 (73.92%), Query Frame = 0
Query: 11 RPITKSKSGPAPIPEGKPSLNRRRSFDKPPPTAPRLEKPFRSPGPRNRAGHVPVRSSSFG 70
+PI KS +GPAPIPEGKPSLNRRRSFDKPPP RL KPFRSP PRNRA H PVRSSSFG
Sbjct: 92 KPIKKS-AGPAPIPEGKPSLNRRRSFDKPPPAMQRLGKPFRSPEPRNRAAHAPVRSSSFG 151
Query: 71 AKPSTTTTTTNTIVNSTKPGLLERSSSKVSKVGGKPQQPIQALKSSTSNVKKSLKREPSN 130
AKPST T+V+STK G LERS SK+ KVGGK QQ +Q KSS SN++KSLKRE SN
Sbjct: 152 AKPST------TLVSSTKTGFLERSGSKIYKVGGKTQQSVQTFKSS-SNLRKSLKRESSN 211
Query: 131 AASASASASVSASASAEMIPKTKNAIEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMP 190
AASAS SAEM+PKTKNA+EHV QSP VLGVNEEDLKKIECELD LPDP P
Sbjct: 212 AASAS---------SAEMVPKTKNAVEHVGQSPVLVLGVNEEDLKKIECELDLCLPDPRP 271
Query: 191 ELDKQL-RIDQVEK-----NETDDTENFKVVVTNKEVEEETPEAAQTEMSLM------NR 250
ELDK+L DQVEK DT+ FKVV +NK+V EETP AA+T+ + N+
Sbjct: 272 ELDKELSTTDQVEKRLHHHQPIQDTKIFKVVGSNKKV-EETPGAAETDNAKSSIWEDENQ 331
Query: 251 EQNEAEG-----DEEKTERITVEKEE---VIASEENTNNKNDQEKSETDPIL-------- 310
EQNE EG +EEK ERI VEKEE V+ASEE+TNNKN++EKS TDPI
Sbjct: 332 EQNEGEGEEEAKEEEKPERIEVEKEEVYGVVASEESTNNKNEEEKSHTDPIQEGVIVLEH 391
Query: 311 ----DGESYKEENDHKATETTEKEGEATDKVAAAVA----AAKPQQGGPARKESPAMYNH 370
DG+S KEEN + +TEKE EAT+KVAAA A AAKP+QGGP RKESPA+YNH
Sbjct: 392 KEAEDGQSSKEENHN----STEKEAEATEKVAAAAAAAAEAAKPRQGGPGRKESPAVYNH 451
BLAST of HG10004604 vs. ExPASy TrEMBL
Match:
A0A6J1HE16 (neurofilament medium polypeptide-like OS=Cucurbita moschata OX=3662 GN=LOC111462632 PE=4 SV=1)
HSP 1 Score: 386.3 bits (991), Expect = 1.4e-103
Identity = 262/397 (65.99%), Postives = 288/397 (72.54%), Query Frame = 0
Query: 11 RPITKSKSGPAPIPEGKPSLNRRRSFDKPPPTAPRLEKPFRSPGPRNRAGHVPVRSSSFG 70
+PI KS GPAPIPEGKPSLNRRRSFDKPPP RL KPFRSP PRNRA H PVRSSSFG
Sbjct: 93 KPIKKS-GGPAPIPEGKPSLNRRRSFDKPPPATQRLGKPFRSPEPRNRAAHAPVRSSSFG 152
Query: 71 AKPSTTTTTTNTIVNSTKPGLLERSSSKVSKVGGKPQQPIQALKSSTSNVKKSLKREPSN 130
AKPST +IV+STK G LERS SK+ KVGGK QQ +Q LKSS SNV+KSLKRE SN
Sbjct: 153 AKPST------SIVSSTKTGFLERSGSKIYKVGGKTQQSVQTLKSS-SNVRKSLKRESSN 212
Query: 131 AASASASASVSASASAEMIPKTKNAIEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMP 190
AASAS SAEM+PKTKNA+EHV QSP VLG NEEDLKKIECELD LPDP P
Sbjct: 213 AASAS---------SAEMVPKTKNAVEHVGQSPVLVLGANEEDLKKIECELDLCLPDPRP 272
Query: 191 ELDKQL-RIDQVEK-----NETDDTENFKVVVTNKEVEEETPEAAQTEMSLM------NR 250
ELDK+L DQVEK +T+ FKVV +NK+V EETP AA+T+ + NR
Sbjct: 273 ELDKELSTTDQVEKRLHHHQPIQETKIFKVVGSNKKV-EETPGAAETDNAKSSIREDENR 332
Query: 251 EQNEAEG-----DEEKTERITVEKEE---VIASEENTNNKNDQEKSETDPIL-------- 310
EQNE EG +EEK ERI VEKEE V+ASEE+TNNKN++EKS T PI
Sbjct: 333 EQNEGEGEEEAKEEEKPERIEVEKEEVFGVVASEESTNNKNEEEKSHTVPIQEGVIVLEH 392
Query: 311 ----DGESYKEENDHKATETTEKEGEATDKVAAA------VAAAKPQQGGPARKESPAMY 370
DG+S KEEN +TEKE EAT+KVAAA AAKP+QGGP RKESPA+Y
Sbjct: 393 KEAEDGQSSKEENH----TSTEKETEATEKVAAAATSAAEAVAAKPRQGGPGRKESPAVY 452
BLAST of HG10004604 vs. TAIR 10
Match:
AT5G24880.1 (BEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (TAIR:AT5G10660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 53.9 bits (128), Expect = 3.1e-07
Identity = 111/386 (28.76%), Postives = 168/386 (43.52%), Query Frame = 0
Query: 30 LNRRRSFDKPPPTAPRLEKPFRSPGPRNRAGHVPVRSSSFGAKPSTTTTTTNTIVNSTKP 89
L RRRSFD+PP + L P S PR + S PS + V KP
Sbjct: 80 LLRRRSFDRPPSS---LTSPSTSASPRIQ--------KSLNVSPS--RSRDRPAVPREKP 139
Query: 90 GLLERSSS-----KVSKVGGKPQQPIQALK----SSTSNVKKSLKREPSNAASASASASV 149
RSSS V K G + P A K +S+S KS K N AS
Sbjct: 140 VTALRSSSFHGSRNVPKGGNTAKSPPVAPKKSGLNSSSTSSKSKKEGSENVRIKKASDKE 199
Query: 150 SASASAEMIPKTKNAIEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQLRIDQ 209
A SA M ++ E + + S L V++ D+++ + E + E + Q ++ Q
Sbjct: 200 IALDSASMSSAQEDHQEEILKVESDHLQVSDHDIEEPKYEKE--------EKEVQEKVVQ 259
Query: 210 VEKNETDDTENF----------------------KVVVTNKEVEEETPEAAQTEMSLMNR 269
++ + E+ K++ ++EE+T E + + + N+
Sbjct: 260 ANESVEEKAESSGPTPVASPVGKDCNAVVAELEEKLIKNEDDIEEKTEEMKEQDNNQANK 319
Query: 270 EQNEAE-----GDEEKTERITVEKEEVIASEENTNNKNDQEKSE-----TDPILDGESYK 329
+ E + + E E++ E +EV + EE T K ++ K E + + E K
Sbjct: 320 SEEEEDVKKKIDENETPEKVDTESKEVESVEETTQEKEEEVKEEGKERVEEEEKEKEKVK 379
Query: 330 EENDHKATETTEKEGEATDKVAAAV-----AAAKPQQGGPARKESPAMYNHVIEETASKL 369
E++ + E EKE D+ V A K ++ +KESP+ YN VI ASK+
Sbjct: 380 EDDQKEKVEEEEKEKVKGDEEKEKVKEEESAEGKKKEVVKGKKESPSAYNDVI---ASKM 439
BLAST of HG10004604 vs. TAIR 10
Match:
AT5G10660.1 (calmodulin-binding protein-related )
HSP 1 Score: 48.5 bits (114), Expect = 1.3e-05
Identity = 110/366 (30.05%), Postives = 161/366 (43.99%), Query Frame = 0
Query: 25 EGKPSLNRRRSFDKPPP--TAPRLEKPFRSPGPRNRAGHVPVRSSSFGAKPSTTTTTTNT 84
E L RRRSFD PP T+P RS H+ + + KP T +T +
Sbjct: 76 EENQKLLRRRSFDHPPSSLTSPSTSSAHRSLNTSPAHPHLRDKPAVPREKPVTGLRST-S 135
Query: 85 IVNSTKPGLLERSSSKVSKVGGKPQQPIQALKSSTSNVKKSLKREPSNAASASASASVSA 144
S++ GL R SS V + P A + S+ K L S+ + S +V
Sbjct: 136 FHGSSRGGL--RGSSTV-------KSPPVASRGSSGVKKSGLSGNSSSKSKKEGSGNVPK 195
Query: 145 SASAEMIPKTKNAIEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQLRIDQVE 204
+S + I D SP +EE++ K+E ++ D E
Sbjct: 196 KSSGKEISP--------DSSPLASAHEDEEEIVKVETDVH--------------ISDHGE 255
Query: 205 KNETDDTENFKVVVTNKEVEEETPEAAQTE--MSLMNREQNEAEGDEEKTERITVEKEEV 264
+ + +D + F + E +E +P AA TE + E E EE E +E+
Sbjct: 256 EPKEEDKDQFAQPDESGEEKETSPVAASTEEQKGELIDEDKSTEQIEEPKEPENIEENNS 315
Query: 265 IASEENTNNKNDQEKSET-------DPILDGESYKEENDHKATETTEKEGE---ATDKVA 324
EE +D+E SET + ++ E KEE +A E E+EGE A ++
Sbjct: 316 EEEEEVKKKSDDEENSETVATTTDMNEAVNVEESKEEEKEEA-EVKEEEGESSAAKEETT 375
Query: 325 AAVAAAK--PQQGG-----PARKESPAMYNHVIEETASKLLE-KRKNKVRALAGAFQTVI 369
+A + P++G +KESP YN VI ASK+ E +KNKV ALAGAFQTVI
Sbjct: 376 ETMAQVEELPEEGTKNEVVQGKKESPTAYNDVI---ASKMQENSKKNKVLALAGAFQTVI 405
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038886465.1 | 1.2e-146 | 83.42 | uncharacterized protein CG45076 [Benincasa hispida] | [more] |
KAA0064998.1 | 1.6e-133 | 78.02 | serine/arginine repetitive matrix protein 1 [Cucumis melo var. makuwa] | [more] |
XP_011649760.1 | 1.0e-132 | 76.92 | neurofilament heavy polypeptide [Cucumis sativus] >KGN62866.1 hypothetical prote... | [more] |
XP_008445084.1 | 1.3e-132 | 77.48 | PREDICTED: serine/arginine repetitive matrix protein 1 [Cucumis melo] | [more] |
XP_023546370.1 | 6.2e-106 | 66.58 | cell wall protein RBR3-like [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7VBK4 | 7.6e-134 | 78.02 | Serine/arginine repetitive matrix protein 1 OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A0A0LS85 | 4.9e-133 | 76.92 | CaM_binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G378000... | [more] |
A0A1S3BBU4 | 6.4e-133 | 77.48 | serine/arginine repetitive matrix protein 1 OS=Cucumis melo OX=3656 GN=LOC103488... | [more] |
A0A6J1K599 | 6.7e-106 | 66.58 | microtubule-associated protein RP/EB family member 1-like OS=Cucurbita maxima OX... | [more] |
A0A6J1HE16 | 1.4e-103 | 65.99 | neurofilament medium polypeptide-like OS=Cucurbita moschata OX=3662 GN=LOC111462... | [more] |
Match Name | E-value | Identity | Description | |
AT5G24880.1 | 3.1e-07 | 28.76 | BEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (... | [more] |
AT5G10660.1 | 1.3e-05 | 30.05 | calmodulin-binding protein-related | [more] |