HG10004601 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAATCAAAACATGCTCCTTTATATTGAAGGGTCCAGGATTCATAGTGAACTCAAACCGCGTGCCTTTGAAAAAGGGTCGAGTCGGAAGTGTTTTGGCCATCAAATGGCCAAGAGGCACAACCGCAATTTGTGCAGCAATCGAAGATACTGACAATGGGTTGGATCTATACCAGAAGAATTGGTTCACAAAGGAGAGTATGACACAAGCCGCAACCCCCAAAACCCACATTCTGAATGTGAGAACTGGCAAGTTGGGGTCATCGGTTTTCGGAACTGTAATATCAACTTGCTTGATCGGGCACTCATCGTGGGTAGTCACCGTCATAGGGTGCTCACTCTGAATCTCGGATACGCTAGTCGACATGGTAATTAGTTAGAAAGTTTCGTTGTGTTGTAGAGTGCAAGGTGAGACTCTCTACCACAACTTCTTCATGGAGATCGCAAGACAATCTGTAGAGTAAAAAGAAACTAAATAAAAGTGGGATTTTGAGTGAAATATAAAATCGATTCCTAAAGAAGTCATGATTCTGTTTCAATACATCCAATCAATGTTCAAAATTAAGTCATAATTCATAAGTGAGAGCATAGTATTCCATTTTCGTTGACATGTCGATATTTCGACCTGAAGGATGAATTGATATTTCTATTATATCGTAAAAAAAATTCACAAAACATAAAAAATAAGCAAGAAAATGTAAGTATTGTAAATATAATATAAATAATATATATGTAAGCTTGTTTAAAAATCATAAAATGTTTATTTACTAATTTAGGTTTATTTTTTGAATTTTTCGTTTTTATAATTTTTCCGATTTCATCAAAATTTTCCTAAAATTAAGATCTTAATATTTTCGTGACATCGACGTTTTAAACCTTGGGTGAGAGTTTACTTTTTAAGAAAAAAAAACTTTCCATGACTACTAATATTATTTTTAAGAAAAAGACGTTTCTCAAAATAATAATAATATCATTATTATTAAGACAGCCATGCAAAATATTGGAAATGGTACAAATATTTGACAAAGATCGTTTTAACCAGGAAATTCTACATTTTATAAAAGTTACCTAATTTATAAAAATATTTCATTTTTACATTTTGAGTGTATGAAAATCTATTTTTTAACCCTGAGTTAAATATATATATATTATCTCTCCTCTCTCATGCCAGTAAAGCATTGACAGAATGGGGTTGGTGGTACTTTAAATACACCTAAATTACTCAATAATTTGGCTTATTTGAATGATCAAAATTTTGGAAGCAACAATATTTTGTCTTAATTGAATGGTCAATTTTGAAAGCAACAATAACATTATGAAATTATATGGCAGATTCTCATTCCAAGTCCAATTTAACTTTAGGAAAAAAAAAAACTTTTATTTATTTATTTTTACAACAAAACTGTTTTTATATCCAAACATGCCTTTAGTCTTAGACTTGCCAAAATCATAATTGGTAGTTAGAAAATTTTATAGTTTAAAAACCTATTTGACACAAATTAGACTCAATTTATAATTTAAGTTATCTAAAATAATAAATATACATGCCTACATTTATATAATAACTATCGAGTGGTTATCATATAAAAAAAAAATCCAAAACTTACCTTATCAATTGTTGGATGAAGATCGGCTTCGGGAACTAAGAATTCCTGAAATTAAAAAAAATAATGATCAATTAAGAGAATGGACATTCAATTTTTGAGAAAGGAAAAAAGAAAAAACAAATCAATGAATGGAAAAAAATGAAGGAAATGTGCGGAAATAAAAAAAAAAAAAAAATTAAAAAGTCGGAAAAAGGGACAAAAAAAGATTGAAAAAATACAATAGAAAATAAGATTTTTTTCTGTTTTTTAAAAGGAAAAGCCTAAAATAGTCTTTTGGCTCATCTCTTTCTTTCCCTCTCCGCTGTGGTTTTTAGAGAGACCACTGACTCTGCTTACTCATCGTCGCCGGCGACGATAGGAACTGGTCAACCACCATACGACGGCGGTCAAACCGACCATCGGGCGGCGTTTTCGGCGGTGCGCAGGCGAAGTGAAGAGGAAAAAGAAAAGAAGAGAAAATAA ATGGTAATCAAAACATGCTCCTTTATATTGAAGGGTCCAGGATTCATAGTGAACTCAAACCGCGTGCCTTTGAAAAAGGGTCGAGTCGGAAGTGTTTTGGCCATCAAATGGCCAAGAGGCACAACCGCAATTTGTGCAGCAATCGAAGATACTGACAATGGGTTGGATCTATACCAGAAGAATTGGTTCACAAAGGAGAGTATGACACAAGCCGCAACCCCCAAAACCCACATTCTGAATGTGAGAACTGGCAAGTTGGGGTCATCGGTTTTCGGAACTGTAATATCAACTTGCTTGATCGGGCACTCATCAGAGACCACTGACTCTGCTTACTCATCGTCGCCGGCGACGATAGGAACTGGTCAACCACCATACGACGGCGGTCAAACCGACCATCGGGCGGCGTTTTCGGCGGTGCGCAGGCGAAGTGAAGAGGAAAAAGAAAAGAAGAGAAAATAA ATGGTAATCAAAACATGCTCCTTTATATTGAAGGGTCCAGGATTCATAGTGAACTCAAACCGCGTGCCTTTGAAAAAGGGTCGAGTCGGAAGTGTTTTGGCCATCAAATGGCCAAGAGGCACAACCGCAATTTGTGCAGCAATCGAAGATACTGACAATGGGTTGGATCTATACCAGAAGAATTGGTTCACAAAGGAGAGTATGACACAAGCCGCAACCCCCAAAACCCACATTCTGAATGTGAGAACTGGCAAGTTGGGGTCATCGGTTTTCGGAACTGTAATATCAACTTGCTTGATCGGGCACTCATCAGAGACCACTGACTCTGCTTACTCATCGTCGCCGGCGACGATAGGAACTGGTCAACCACCATACGACGGCGGTCAAACCGACCATCGGGCGGCGTTTTCGGCGGTGCGCAGGCGAAGTGAAGAGGAAAAAGAAAAGAAGAGAAAATAA MVIKTCSFILKGPGFIVNSNRVPLKKGRVGSVLAIKWPRGTTAICAAIEDTDNGLDLYQKNWFTKESMTQAATPKTHILNVRTGKLGSSVFGTVISTCLIGHSSETTDSAYSSSPATIGTGQPPYDGGQTDHRAAFSAVRRRSEEEKEKKRK Homology
BLAST of HG10004601 vs. NCBI nr
Match: PON73570.1 (hypothetical protein PanWU01x14_057520, partial [Parasponia andersonii]) HSP 1 Score: 115.2 bits (287), Expect = 5.1e-22 Identity = 56/109 (51.38%), Postives = 71/109 (65.14%), Query Frame = 0
BLAST of HG10004601 vs. NCBI nr
Match: KAF8391690.1 (hypothetical protein HHK36_023999 [Tetracentron sinense]) HSP 1 Score: 111.7 bits (278), Expect = 5.6e-21 Identity = 59/104 (56.73%), Postives = 64/104 (61.54%), Query Frame = 0
BLAST of HG10004601 vs. NCBI nr
Match: PON92826.1 (hypothetical protein TorRG33x02_114240 [Trema orientale]) HSP 1 Score: 110.5 bits (275), Expect = 1.3e-20 Identity = 66/152 (43.42%), Postives = 88/152 (57.89%), Query Frame = 0
BLAST of HG10004601 vs. NCBI nr
Match: BAJ85002.1 (predicted protein, partial [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 104.0 bits (258), Expect = 1.2e-18 Identity = 60/126 (47.62%), Postives = 74/126 (58.73%), Query Frame = 0
BLAST of HG10004601 vs. NCBI nr
Match: EEC79911.1 (hypothetical protein OsI_21458 [Oryza sativa Indica Group] >EEE65015.1 hypothetical protein OsJ_19966 [Oryza sativa Japonica Group] >KAB8101011.1 hypothetical protein EE612_031678 [Oryza sativa] >BAF18580.1 Os06g0127600 [Oryza sativa Japonica Group] >BAS95937.1 Os06g0127600 [Oryza sativa Japonica Group]) HSP 1 Score: 99.0 bits (245), Expect = 3.8e-17 Identity = 55/104 (52.88%), Postives = 63/104 (60.58%), Query Frame = 0
BLAST of HG10004601 vs. ExPASy TrEMBL
Match: A0A2P2IVI1 (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 4.1e-25 Identity = 65/107 (60.75%), Postives = 72/107 (67.29%), Query Frame = 0
BLAST of HG10004601 vs. ExPASy TrEMBL
Match: A0A2P5DJX3 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_057520 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 2.5e-22 Identity = 56/109 (51.38%), Postives = 71/109 (65.14%), Query Frame = 0
BLAST of HG10004601 vs. ExPASy TrEMBL
Match: A0A2P5F4W1 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_114240 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 6.1e-21 Identity = 66/152 (43.42%), Postives = 88/152 (57.89%), Query Frame = 0
BLAST of HG10004601 vs. ExPASy TrEMBL
Match: F2CQ81 (Predicted protein (Fragment) OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 5.7e-19 Identity = 60/126 (47.62%), Postives = 74/126 (58.73%), Query Frame = 0
BLAST of HG10004601 vs. ExPASy TrEMBL
Match: A0A0E0DW16 (Uncharacterized protein OS=Oryza meridionalis OX=40149 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 2.8e-18 Identity = 54/98 (55.10%), Postives = 61/98 (62.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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