HG10004558 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10004558
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionNuclear pore complex protein Nup85
LocationChr08: 18293945 .. 18299941 (+)
RNA-Seq ExpressionHG10004558
SyntenyHG10004558
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAGGCCCCGCCTTTGATTCTTCTCCCAGCGGTGCCCTAGTCTTGTCCTCTTCGGAGGCCCGAGAAGTGGTCTACCCTCTCCGACACGAACTTAAGCCTCCTATAGCTCGATTATCCATTTCCTGGGCCAGAGGCAACTCCTTCCGTGTTTCCATTTTCAAGCAGCAGTCTGGTGACCATTCTTCAGACTCTGGTGACGGTGAAGTTGGCGGGCAAGTATTGGAGGTGAAGATCAGAAATGGAGACGGAGAAATTAGTGCTGCCGAGTTCCGGAGGATAGCGTACGGTTCAGTCTCCCCCTTTGCGCTTCTTCAGAGTCGGAAACATATGGCTTCGGGATTGTCGAAGATGTCGATGGGTTTGGCACGGTTTAATCCGGACGGGTAAGGGCTAAGAGTTTTTCGGTAATTGAGAATTTATACTTTCATCTGGTGGATTGCATTTTCAGCACGAAAACTAGCATTGTGGATTGGAATTGGACGCAGTACTTTTTATATTTCAAGCATCTTTGTTGCATGTTGAGTCAATCCTTTACTGATTAGAGGGAACTCTTTTGAAAACAGGTGGGAATACTTAGCGGAGTATAGCAAGGACATCAGTTCAATTATTGGTAATCCGAAGTCAATTCCTAGCTCAGCGATTGATGACCCCCTGGAAATTTTGAAGGCGAGTTGGTGTGTTTGGAGTTGCATTTTAATTTTGACGTTAAGTAGCTCTTTCTAGGAATATGCCTGGAAGTGTTTGCATGTCGTTAAGTTTAATAGCAGTGTCATTGTTGACATGAAGTTGCTGATGCTAAAACTTTCTTTTTTATGCATAAGTAATCTTGTTATTGACATTTTAAGAATCTCTATAGAAAGTCGAGGAGCCTACTTGTTTGAAAGCTGCATGGGAGCTGATGGATGTGTTTTATGCCGACAAGCAGTCTCATTGGTGGCTTAATGAACGCCTTGTTGATTGGTTAGCTGTACTGATCTTCCCATCTTCATTCTTTTCTTTAAGAACTTTATCGGTAAATTCCCACTAACGGTAATAATTGTCTGCTGATAGCTCATACTTAGTCTTTTCATGGCAGGAATATGATAGCGTCCTCTCAACCACACAATCAACTATCCATTCAAAACTGGTTGACTTTCGAAAAGAACTTAATAACTTACAGGTTCTCCAAATTTTGTTCCATCATTTTTTGTTTTATGCTTATCTTTATTACCAATGTGTTAATTCCTATTTCTGTGTTGTGTATGCACTATAAATTCTATGAGCCCCTGAATTTAGAGTCTTCTTCTCAAAAGAATTTAGAGTCTTTGCTGTTTTTTCTTAACTAATTTGTTGAACACTTTAAACAACCTTTTTTCTTCACTCCCAATTTCCTCAGCTCAGTACGTAGCCAACCTCCTTGGCCAGATTAAACCATCAGGTCCGAACAAGCTTTATCTTAGTTCTAGTGCACCCCTTTCTGCCATGCAGTATTTCTGATTGGTAGTAGTTGTTCTTTGTCATTTTCTGTGAGGAGGCTGGCTACTATCTGCTTTTTAGCTGGAAAATGTGAATGCAATATCTTTTTGTTGTCGTACAAGGTAGAATTGTCAGAGTGGTTTTTAATATTATAACTTCTGCTTCAATAAATTTCATAAATAGTCTTTTTGGTGAAGTTGGCGTTGAAGGATTTATTGTCATTGTTTCCTTACTAGGCAATTGGATTTGTCACTTGATATGAGCAAATATTAGCATTCATTGTTCTTTTTGGTCATTGGTGGTCATCCATTACTTTTTTTTTATGTCAAGGTAGTTGAGGATAATCCAAGTTATTGGGATTTGATTTTATCAGCATTAGCAGTTGGCTGGCAAGAGATTGTGGTGAGTGGTTATTGGATTTTCATTTTGTGTTCCATTCTTTTTACCCATTAACCAGCATATGGCATCACCCAGTGCTTGAAAACGAGGTAATGCTGATTCTGCTTGCAGGTTAAAATGTTGCGCCTACATGGATCTTATCAGCTGGATCAACTTAGCAATCGGGAGGTTTGTCAGAAATTTTCAGTTGCTCATATATTGCATGAGGACCCCAAATATTATGTGTGAATATGCATTGTTTGATCTATGAGTTGCTGTTGCATCTTCATATGTATTTTTGTACCATCACAAACACTTATTATATGATTTTCCTTAAAATAGAGTTTGGTCATAACTCAGTGGGGAAGGAACTGATGAAGAATGAAGGTTTTACTGCGCAAACATGCACTGGTCAGTGGTTATGAGTGTTGGTGAATGGGGTATAGTCCATAGAGTCGTAAAAAATGCAAATTAAATTTTGAAAAATTGTCTTATAGAAGAAGTTCAAAGGTTGTAGAAAATTTGAGCAAGGCTTCCTGGAAAAGAAAAACATTCTATGAAGTGTAGTATATTACCTAATAGAGGAATGTAATTGATGAGTTAGATATGAGAGAGGAATGCATTTAAACTTTCCTTGTTTGAGTGGATCTTTTCAAGATTGTACCTTAAGATTTTAATATGATGTAATTAAAAAACAATGGAGAATACATGTACCCTGGTGATGGATGAACTGATCTCTCAAAGGTTGACAAACTTTATCATTTAACTTCTTGTCCTCATTACATTCTTTGGCTAGAATTAGGCATGTTATTTGTACGTGGTGATTCAAGTTTTCTTGTATTTTGTTAAGTATGTATCTCTAAATATAAGAGTAATGTTGTGTAAATAGAAATTTCTTTTTTATAACTATATCTGATACCTTATGAATGACAGACAGAGAATGGACTGGTAGAGGCAGTGGCTTTTCTTATTTCAGAAATGCCGTGCATGCGCCCTGAGTTGGGTTCTGGTAGATTTGGTGAATGCTTCAAAACCAAGCCCGATTTTACCAAGGTATGTTGAATTAAATTTAAAATTTTGCACACCCTGTTATGAAAAGCCTTGATACATGGTCTAGAATATTCATATTGTTCAATAGGCATGGGAAAAATGGCGTTCGAAAATAACCAAGTTGGACGGCTCTGGGTTTTGGGTTCACTGTGCTCATGTTGAGACCAGAAAAGGTTTGCGGAACATGCTTCAGATCATTCTAGGAAATGTTGAGAGCCTCAGTGGTGCAACCTGCAACTGGATGGAGCTGTATATCTCTCAGCTTTTATATGTTAGACCATTCGCAATGGTAATGTTCATCTGCCTGATAAATTTTCAGTTCCTACTTTTAGAATAACCTGACACACAGTCTCTGCAGCCTGCACATTGCCCTTCAAGAGGCTAATATCTATTTCTGTCTAGTCAGGGTCTAGAAAGCATGTACAACCTTGCAGAAAGATGTATGCAGTTAAAACCAGCTTCTAATACTGATCGCTTGATGGGGCTAATGATTGGAATTCTTGGAGAAAGTACAGAGGTAAGGAATGTGGATTATATCTTATCTGATCTTCTATTTTTGACTTGGGAGTTTCTCTGTCGTGGCTCAGGTTGTTTTAGCGGAGTGTTCTAGAGGATTTGGCCCCTGGTGAGCTAAAGTAGCCTTATCTTTGGTGCCTGTGCCCTAGACATGCATTAGTGCATAGAGTTTAAAGCTTTTTAGTATTCTTTATTGGTAGGATGGTTACACATGCCATGGAATTGTTGACTGAAGAGAGTGATCAGGCAGAGACTCTTCTACATGAAGAGCGCTATGATCTTGGGGGAGTTAGCATAGAGGAACTTCATCGTCTTGTTTATGCTCAAGTTCTCTGTTCACATGCATTTACTTGGCAGGTTTGTGCTTTTATTTTTTTCTTTTTTTTTGTAATGGGTTTGTCTAGAAGATTTGGAGAAGGATATTCTGAGTAGTTCCATTCATCATGTAGATTGTTTATTGAAATCTTGTTGTATCATTCTTTTATTTTTTTTCCTCATCGGAGTTGTGTTCCTCTAGCTAGGAGATAAATATTTACGAAGTTTATGTAGGTCCTAGGTTAAAAAGAGGAGGTAAAAAAAAGTTCATTTAGGCATTTTTAGCTGTTTAAATTAGATCCTTAACAGTTGGCATGCCTACAATTTCCTTGTCATAGTTCAAGCTGTTCGTTGATATTTATTTATATAAGGTGGTGAAAATTCTTCCCCACGACATCAACTATCCTCATGCATCTGATACTTGTGTGTCTCTCAGATCGCTCCAATTTACTTGACATCATGCGCAAAGCAGGGAACTGGTTTTTTAGAAACTTTGTTATACAGTCAAGCGGTTCACCATAATGGGATGCTACTTAAGGTGATCGATATATGTTTTACTTTTAGTTGTTGGAACCTCTAAAGTTTCTGCGTAATTTGGTTTTATCTTTTGAATGTGAATTTTAACACGGTTTGATTCTTTTTGTAGAATTTAGAGATATGTCGTTTATATGAACTTGACAGTCTTAGTTCAAACATTATGAAGGTACATGTTTTCTAAATTCTTGTCGTGTTCTTAAGTTACTACTTTTCAGCCTACAACAAGGCAAATTTTGTAATGGACACAAGTATTCTAGGAGTTCATATTTATTTACTTGTGTGAACATTCTCATAAAAAAATTATTCTAATGTTCAGATTGCTGGAGTTTACCATTGGAAGCATGGTAGGAAGGGTTGTGGAGTTTTTTGGCTTAGGCAAGCTAGGGATGAAGTTCGTCTTAACAAGATTGCCCAGCAATTGTTTGATTCAGTTGGAAAGTCCATATCTGATGAAAGTTTCAAGGTAATAAACATCTCTAAATTCAGCATTTCCACGATCCCAAGTTTACTGTGTTTTGGCCTGCCTTTTGAAAAAAGTGTCTTTAGTGAAGCACTCATTGTATAAGCATGTTTGAAAAATAATTAGTTAAACGCTTAAAAGCAATTAAGTGCTTTTTTGTTTTAATTAAAATTTCTCAAACCACTCTTGATTATTGAAAATTTTTATAAAGGTGATTTTAATCGGTAAAATCATTCTAACCAAATGCATAAACTTTGAAAAAAGCGTCAGGCAGGTCACACACTAGAATATTGGAGGTATTTGGTTTAGAGGACCCCTCCTTAAATCTCTTTCAAAACTGGATATGTTATATAAACGTCTGGTTATTTTCATCTCTGTGGTATCATTTTCTAGCATTGCTTATTAATTGTTTATATTGATGCATCACTACTAGTGAAAACATTCCGTATTTGTGCAACCAATCTCATATTGAATTCATCTGTTTTACAGCAATGGGAAGGATTAATCGAATTGTTGGGTTCTGAGTCTAAAAATACTGGAGGCCTTGAGTTTCTCCACAAGTATGTTTCGTTTCGTTACTAGTCTTTTCTTTCAATTTAATTTCTCATCTAATCGCTGGTGGATATTCAGGTACAGGGATTTCAAAAAATCGCTTCATCAGGTTCACCACAAGGGGAAAACTACAGGTGTTGCACAGTCTGCAGTGGACTCTCTCATTGCGGTATTACTCGACTTTCTCTTATATAAAAAGATCATGTCAAGCTTTAATTGAGCTATTTCAAGATCATTTTAACATTTTTAAGAAGATGGGTAGGGTTGGGTTCGTAACCCTGATGAAAAATCAAGCATTTCGGGGACTTGATTCGTTCTCATCCCTCTCTAATCAAATCCCTTATTATTTGACCTTTTATAGTCACCAATCTTATTTGACTCTGCAGCTTATGAAGAACCCTTCGACGCCTCAGCGCTTTTGGCTACCGATTTTAAATGACTCGGTAATTATATAATTATATTTTTGTACGTTGTTGAATGAAATGGTTTTGTAGTTAAAATTATAATTATTAAATCACATCTTCAACACCCTGCAGTTGAAGCTTATTGATTGGCACGAAGGTCCTCTACTAAACATTGAGCAGACCAACCTTTTGTTGAATAAACTACAAGAGCTGTCAATGGCGAGGCTTCGACCTGACTTCGTCGAATCTAACTTGCCACCTCTGGCCTTGAGCTCCATCAGGTTGGCTCTTGCAAAAAATCTTGGACGTGCTTTTCTCGAGGGGTGA

mRNA sequence

ATGCCAGGCCCCGCCTTTGATTCTTCTCCCAGCGGTGCCCTAGTCTTGTCCTCTTCGGAGGCCCGAGAAGTGGTCTACCCTCTCCGACACGAACTTAAGCCTCCTATAGCTCGATTATCCATTTCCTGGGCCAGAGGCAACTCCTTCCGTGTTTCCATTTTCAAGCAGCAGTCTGGTGACCATTCTTCAGACTCTGGTGACGGTGAAGTTGGCGGGCAAGTATTGGAGGTGAAGATCAGAAATGGAGACGGAGAAATTAGTGCTGCCGAGTTCCGGAGGATAGCGTACGGTTCAGTCTCCCCCTTTGCGCTTCTTCAGAGTCGGAAACATATGGCTTCGGGATTGTCGAAGATGTCGATGGGTTTGGCACGGTTTAATCCGGACGGGTGGGAATACTTAGCGGAGTATAGCAAGGACATCAGTTCAATTATTGGTAATCCGAAGTCAATTCCTAGCTCAGCGATTGATGACCCCCTGGAAATTTTGAAGGCGAGTTGGTGTGAATATGATAGCGTCCTCTCAACCACACAATCAACTATCCATTCAAAACTGGTTGACTTTCGAAAAGAACTTAATAACTTACAGGTAGTTGAGGATAATCCAAGTTATTGGGATTTGATTTTATCAGCATTAGCAGTTGGCTGGCAAGAGATTGTGGTTAAAATGTTGCGCCTACATGGATCTTATCAGCTGGATCAACTTAGCAATCGGGAGACAGAGAATGGACTGGTAGAGGCAGTGGCTTTTCTTATTTCAGAAATGCCGTGCATGCGCCCTGAGTTGGGTTCTGGTAGATTTGGTGAATGCTTCAAAACCAAGCCCGATTTTACCAAGGCATGGGAAAAATGGCGTTCGAAAATAACCAAGTTGGACGGCTCTGGGTTTTGGGTTCACTGTGCTCATGTTGAGACCAGAAAAGGTTTGCGGAACATGCTTCAGATCATTCTAGGAAATGTTGAGAGCCTCAGTGGTGCAACCTGCAACTGGATGGAGCTGTATATCTCTCAGCTTTTATATGTTAGACCATTCGCAATGGGTCTAGAAAGCATGTACAACCTTGCAGAAAGATGTATGCAGTTAAAACCAGCTTCTAATACTGATCGCTTGATGGGGCTAATGATTGGAATTCTTGGAGAAAGTACAGAGGTTGTTTTAGCGGAGTGTTCTAGAGGATTTGGCCCCTGGATGGTTACACATGCCATGGAATTGTTGACTGAAGAGAGTGATCAGGCAGAGACTCTTCTACATGAAGAGCGCTATGATCTTGGGGGAGTTAGCATAGAGGAACTTCATCGTCTTGTTTATGCTCAAGTTCTCTGTTCACATGCATTTACTTGGCAGATCGCTCCAATTTACTTGACATCATGCGCAAAGCAGGGAACTGGTTTTTTAGAAACTTTGTTATACAGTCAAGCGGTTCACCATAATGGGATGCTACTTAAGAATTTAGAGATATGTCGTTTATATGAACTTGACAGTCTTAGTTCAAACATTATGAAGATTGCTGGAGTTTACCATTGGAAGCATGGTAGGAAGGGTTGTGGAGTTTTTTGGCTTAGGCAAGCTAGGGATGAAGTTCGTCTTAACAAGATTGCCCAGCAATTGTTTGATTCAGTTGGAAAGTCCATATCTGATGAAAGTTTCAAGCAATGGGAAGGATTAATCGAATTGTTGGGTTCTGAGTCTAAAAATACTGGAGGCCTTGAGTTTCTCCACAAGTACAGGGATTTCAAAAAATCGCTTCATCAGGTTCACCACAAGGGGAAAACTACAGGTGTTGCACAGTCTGCAGTGGACTCTCTCATTGCGCTTATGAAGAACCCTTCGACGCCTCAGCGCTTTTGGCTACCGATTTTAAATGACTCGTTGAAGCTTATTGATTGGCACGAAGGTCCTCTACTAAACATTGAGCAGACCAACCTTTTGTTGAATAAACTACAAGAGCTGTCAATGGCGAGGCTTCGACCTGACTTCGTCGAATCTAACTTGCCACCTCTGGCCTTGAGCTCCATCAGGTTGGCTCTTGCAAAAAATCTTGGACGTGCTTTTCTCGAGGGGTGA

Coding sequence (CDS)

ATGCCAGGCCCCGCCTTTGATTCTTCTCCCAGCGGTGCCCTAGTCTTGTCCTCTTCGGAGGCCCGAGAAGTGGTCTACCCTCTCCGACACGAACTTAAGCCTCCTATAGCTCGATTATCCATTTCCTGGGCCAGAGGCAACTCCTTCCGTGTTTCCATTTTCAAGCAGCAGTCTGGTGACCATTCTTCAGACTCTGGTGACGGTGAAGTTGGCGGGCAAGTATTGGAGGTGAAGATCAGAAATGGAGACGGAGAAATTAGTGCTGCCGAGTTCCGGAGGATAGCGTACGGTTCAGTCTCCCCCTTTGCGCTTCTTCAGAGTCGGAAACATATGGCTTCGGGATTGTCGAAGATGTCGATGGGTTTGGCACGGTTTAATCCGGACGGGTGGGAATACTTAGCGGAGTATAGCAAGGACATCAGTTCAATTATTGGTAATCCGAAGTCAATTCCTAGCTCAGCGATTGATGACCCCCTGGAAATTTTGAAGGCGAGTTGGTGTGAATATGATAGCGTCCTCTCAACCACACAATCAACTATCCATTCAAAACTGGTTGACTTTCGAAAAGAACTTAATAACTTACAGGTAGTTGAGGATAATCCAAGTTATTGGGATTTGATTTTATCAGCATTAGCAGTTGGCTGGCAAGAGATTGTGGTTAAAATGTTGCGCCTACATGGATCTTATCAGCTGGATCAACTTAGCAATCGGGAGACAGAGAATGGACTGGTAGAGGCAGTGGCTTTTCTTATTTCAGAAATGCCGTGCATGCGCCCTGAGTTGGGTTCTGGTAGATTTGGTGAATGCTTCAAAACCAAGCCCGATTTTACCAAGGCATGGGAAAAATGGCGTTCGAAAATAACCAAGTTGGACGGCTCTGGGTTTTGGGTTCACTGTGCTCATGTTGAGACCAGAAAAGGTTTGCGGAACATGCTTCAGATCATTCTAGGAAATGTTGAGAGCCTCAGTGGTGCAACCTGCAACTGGATGGAGCTGTATATCTCTCAGCTTTTATATGTTAGACCATTCGCAATGGGTCTAGAAAGCATGTACAACCTTGCAGAAAGATGTATGCAGTTAAAACCAGCTTCTAATACTGATCGCTTGATGGGGCTAATGATTGGAATTCTTGGAGAAAGTACAGAGGTTGTTTTAGCGGAGTGTTCTAGAGGATTTGGCCCCTGGATGGTTACACATGCCATGGAATTGTTGACTGAAGAGAGTGATCAGGCAGAGACTCTTCTACATGAAGAGCGCTATGATCTTGGGGGAGTTAGCATAGAGGAACTTCATCGTCTTGTTTATGCTCAAGTTCTCTGTTCACATGCATTTACTTGGCAGATCGCTCCAATTTACTTGACATCATGCGCAAAGCAGGGAACTGGTTTTTTAGAAACTTTGTTATACAGTCAAGCGGTTCACCATAATGGGATGCTACTTAAGAATTTAGAGATATGTCGTTTATATGAACTTGACAGTCTTAGTTCAAACATTATGAAGATTGCTGGAGTTTACCATTGGAAGCATGGTAGGAAGGGTTGTGGAGTTTTTTGGCTTAGGCAAGCTAGGGATGAAGTTCGTCTTAACAAGATTGCCCAGCAATTGTTTGATTCAGTTGGAAAGTCCATATCTGATGAAAGTTTCAAGCAATGGGAAGGATTAATCGAATTGTTGGGTTCTGAGTCTAAAAATACTGGAGGCCTTGAGTTTCTCCACAAGTACAGGGATTTCAAAAAATCGCTTCATCAGGTTCACCACAAGGGGAAAACTACAGGTGTTGCACAGTCTGCAGTGGACTCTCTCATTGCGCTTATGAAGAACCCTTCGACGCCTCAGCGCTTTTGGCTACCGATTTTAAATGACTCGTTGAAGCTTATTGATTGGCACGAAGGTCCTCTACTAAACATTGAGCAGACCAACCTTTTGTTGAATAAACTACAAGAGCTGTCAATGGCGAGGCTTCGACCTGACTTCGTCGAATCTAACTTGCCACCTCTGGCCTTGAGCTCCATCAGGTTGGCTCTTGCAAAAAATCTTGGACGTGCTTTTCTCGAGGGGTGA

Protein sequence

MPGPAFDSSPSGALVLSSSEAREVVYPLRHELKPPIARLSISWARGNSFRVSIFKQQSGDHSSDSGDGEVGGQVLEVKIRNGDGEISAAEFRRIAYGSVSPFALLQSRKHMASGLSKMSMGLARFNPDGWEYLAEYSKDISSIIGNPKSIPSSAIDDPLEILKASWCEYDSVLSTTQSTIHSKLVDFRKELNNLQVVEDNPSYWDLILSALAVGWQEIVVKMLRLHGSYQLDQLSNRETENGLVEAVAFLISEMPCMRPELGSGRFGECFKTKPDFTKAWEKWRSKITKLDGSGFWVHCAHVETRKGLRNMLQIILGNVESLSGATCNWMELYISQLLYVRPFAMGLESMYNLAERCMQLKPASNTDRLMGLMIGILGESTEVVLAECSRGFGPWMVTHAMELLTEESDQAETLLHEERYDLGGVSIEELHRLVYAQVLCSHAFTWQIAPIYLTSCAKQGTGFLETLLYSQAVHHNGMLLKNLEICRLYELDSLSSNIMKIAGVYHWKHGRKGCGVFWLRQARDEVRLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGGLEFLHKYRDFKKSLHQVHHKGKTTGVAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLIDWHEGPLLNIEQTNLLLNKLQELSMARLRPDFVESNLPPLALSSIRLALAKNLGRAFLEG
Homology
[Close]
BLAST of HG10004558 vs. NCBI nr
Match: XP_038885681.1 (nuclear pore complex protein NUP85 isoform X1 [Benincasa hispida])

HSP 1 Score: 1283.9 bits (3321), Expect = 0.0e+00
Identity = 650/719 (90.40%), Postives = 663/719 (92.21%), Query Frame = 0 

Query: 1   MPGPAFDSSPSGALVLSSSEAREVVYPLRHELKPPIARLSISWARGNSFRVSIFKQQSGD 60
           MPGPAFDS P  ALVLSS EAREVVYPLRHELKPPIARLSISWARGNSFRVSIFKQQ GD
Sbjct: 1   MPGPAFDSYPGDALVLSSLEAREVVYPLRHELKPPIARLSISWARGNSFRVSIFKQQCGD 60

Query: 61  HSSDSGDGEVGGQVLEVKIRNGDGEISAAEFRRIAYGSVSPFALLQSRKHMASGLSKMSM 120
           HSSDS DGEVGGQVLEVKIRNGDGE SAAEFRRIAYGSVSPFALLQSRK M SGLSKMSM
Sbjct: 61  HSSDSDDGEVGGQVLEVKIRNGDGETSAAEFRRIAYGSVSPFALLQSRKRMVSGLSKMSM 120

Query: 121 GLARFNPDGWEYLAEYSKDISSIIGNPKSIPSSAIDDPLEI---------LKASW----- 180
           GL+RFNPDGWEYLAEYSKDISS+IGNPKSIPSSAI+DPLEI         LKA+W     
Sbjct: 121 GLSRFNPDGWEYLAEYSKDISSVIGNPKSIPSSAIEDPLEILKKVKEPTCLKAAWELMDV 180

Query: 181 -------------------CEYDSVLSTTQSTIHSKLVDFRKELNNLQVVEDNPSYWDLI 240
                               EYDSVLSTTQSTIHSKL+DFRKELNNLQVVEDNPSYWDLI
Sbjct: 181 FYADKQSHWWLNERLVDWLAEYDSVLSTTQSTIHSKLLDFRKELNNLQVVEDNPSYWDLI 240

Query: 241 LSALAVGWQEIVVKMLRLHGSYQLDQLSNRETENGLVEAVAFLISEMPCMRPELGSGRFG 300
           LSALAVGWQEIVVKMLRLHGSYQLDQLSNRETENGLVEAVAFLISEMP MRPEL SG FG
Sbjct: 241 LSALAVGWQEIVVKMLRLHGSYQLDQLSNRETENGLVEAVAFLISEMPRMRPELDSGTFG 300

Query: 301 ECFKTKPDFTKAWEKWRSKITKLDGSGFWVHCAHVETRKGLRNMLQIILGNVESLSGATC 360
           ECFKTKPDFTKAWEKWRSKITKLDGS FWV CAHV+TRKGLRNMLQIILGNVESLSGATC
Sbjct: 301 ECFKTKPDFTKAWEKWRSKITKLDGSAFWVQCAHVQTRKGLRNMLQIILGNVESLSGATC 360

Query: 361 NWMELYISQLLYVRPFAMGLESMYNLAERCMQLKPASNTDRLMGLMIGILGESTEVVLAE 420
           NWMELYISQLLYVRPFAMGLESMYNLAERCMQLKPAS TDRLMGL+IGILGESTEVVLAE
Sbjct: 361 NWMELYISQLLYVRPFAMGLESMYNLAERCMQLKPASKTDRLMGLIIGILGESTEVVLAE 420

Query: 421 CSRGFGPWMVTHAMELLTEESDQAETLLHEERYDLGGVSIEELHRLVYAQVLCSHAFTWQ 480
           CSRGFGPWMVTHAMELLT+ESDQAE LL EER+DLGGVSIEELHRLVYAQVLCSHAFT Q
Sbjct: 421 CSRGFGPWMVTHAMELLTKESDQAEILLQEERHDLGGVSIEELHRLVYAQVLCSHAFTLQ 480

Query: 481 IAPIYLTSCAKQGTGFLETLLYSQAVHHNGMLLKNLEICRLYELDSLSSNIMKIAGVYHW 540
           IAPIYLTSCAKQG GFLETLLYSQAV HNGMLLKNLEICRLYELDSLSSNIMKIAGVYHW
Sbjct: 481 IAPIYLTSCAKQGIGFLETLLYSQAVQHNGMLLKNLEICRLYELDSLSSNIMKIAGVYHW 540

Query: 541 KHGRKGCGVFWLRQARDEVRLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG 600
           KHGRKGCGVFWLRQA DEVRLNKIAQQLFDSVGKSISDESFKQW+GLIELLGSESKNTGG
Sbjct: 541 KHGRKGCGVFWLRQAGDEVRLNKIAQQLFDSVGKSISDESFKQWDGLIELLGSESKNTGG 600

Query: 601 LEFLHKYRDFKKSLHQVHHKGKTTGVAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID 660
           LEFLHKY DFKKSLHQVH+KGKTTGVAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID
Sbjct: 601 LEFLHKYSDFKKSLHQVHNKGKTTGVAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID 660

Query: 661 WHEGPLLNIEQTNLLLNKLQELSMARLRPDFVESNLPPLALSSIRLALAKNLGRAFLEG 687
           WHEGPLLN+EQTNLLLNKLQELSMARLRPDFVES+LPPLALSSIRLALAKNLGRAFLEG
Sbjct: 661 WHEGPLLNVEQTNLLLNKLQELSMARLRPDFVESDLPPLALSSIRLALAKNLGRAFLEG 719

[Close]
BLAST of HG10004558 vs. NCBI nr
Match: XP_008445011.1 (PREDICTED: nuclear pore complex protein NUP85 [Cucumis melo] >XP_016899979.1 PREDICTED: nuclear pore complex protein NUP85 [Cucumis melo])

HSP 1 Score: 1279.6 bits (3310), Expect = 0.0e+00
Identity = 641/719 (89.15%), Postives = 667/719 (92.77%), Query Frame = 0 

Query: 1   MPGPAFDSSPSGALVLSSSEAREVVYPLRHELKPPIARLSISWARGNSFRVSIFKQQSGD 60
           MPGPA DSSPSGALVLSSSEAREVVYP+RHELKPPIARLSISWARGNSFRVSIFKQ SG+
Sbjct: 1   MPGPASDSSPSGALVLSSSEAREVVYPIRHELKPPIARLSISWARGNSFRVSIFKQHSGN 60

Query: 61  HSSDSGDGEVGGQVLEVKIRNGDGEISAAEFRRIAYGSVSPFALLQSRKHMASGLSKMSM 120
           HSSDS D EVGGQVLEVKIRNGDGEISAAEFRRIAYGSVSPFALLQSRKHM SGLSKMSM
Sbjct: 61  HSSDSNDDEVGGQVLEVKIRNGDGEISAAEFRRIAYGSVSPFALLQSRKHMVSGLSKMSM 120

Query: 121 GLARFNPDGWEYLAEYSKDISSIIGNPKSIPSSAIDDPLEI---------LKASW----- 180
           GL+RFNP+GWEYLAEYSKDIS +IGNPKSIPSSAI+DPLEI         LKA+W     
Sbjct: 121 GLSRFNPNGWEYLAEYSKDISLVIGNPKSIPSSAIEDPLEILKKVEEPTCLKAAWELMDV 180

Query: 181 -------------------CEYDSVLSTTQSTIHSKLVDFRKELNNLQVVEDNPSYWDLI 240
                               EYDSVLSTT STIHSKLVDFRKELNNLQVVEDNP YWD+I
Sbjct: 181 FYADKQSHWWLNERLVDWLAEYDSVLSTTLSTIHSKLVDFRKELNNLQVVEDNPRYWDVI 240

Query: 241 LSALAVGWQEIVVKMLRLHGSYQLDQLSNRETENGLVEAVAFLISEMPCMRPELGSGRFG 300
           LSALAVGWQEIVVKMLRLHGSYQLDQLS+RETENGLVEAVAFLISEMP +RPEL SG+FG
Sbjct: 241 LSALAVGWQEIVVKMLRLHGSYQLDQLSSRETENGLVEAVAFLISEMPRLRPELDSGKFG 300

Query: 301 ECFKTKPDFTKAWEKWRSKITKLDGSGFWVHCAHVETRKGLRNMLQIILGNVESLSGATC 360
           +CFKTKPDFTKAWEKWRSKITKLDGSGFWVHC HV+TRKGL+NMLQIILGNVESLSGATC
Sbjct: 301 QCFKTKPDFTKAWEKWRSKITKLDGSGFWVHCTHVQTRKGLQNMLQIILGNVESLSGATC 360

Query: 361 NWMELYISQLLYVRPFAMGLESMYNLAERCMQLKPASNTDRLMGLMIGILGESTEVVLAE 420
           NWMELYISQLLYVRPF+MGLESMYNLAE+CMQLKPASNTDRLM L+IGILGES EVVLAE
Sbjct: 361 NWMELYISQLLYVRPFSMGLESMYNLAEKCMQLKPASNTDRLMALIIGILGESPEVVLAE 420

Query: 421 CSRGFGPWMVTHAMELLTEESDQAETLLHEERYDLGGVSIEELHRLVYAQVLCSHAFTWQ 480
           CSRGFGPWMVTHAMELLTEE+ +AE+LLHEER+DLGGVSIEELHRLVYAQVLCSHAFTWQ
Sbjct: 421 CSRGFGPWMVTHAMELLTEENGEAESLLHEERHDLGGVSIEELHRLVYAQVLCSHAFTWQ 480

Query: 481 IAPIYLTSCAKQGTGFLETLLYSQAVHHNGMLLKNLEICRLYELDSLSSNIMKIAGVYHW 540
           IAPIYLTSCAKQG GFLETLLYSQAV HNG+LLKNLEICRLYEL+SLSSNIMKIAGVYHW
Sbjct: 481 IAPIYLTSCAKQGIGFLETLLYSQAVQHNGVLLKNLEICRLYELNSLSSNIMKIAGVYHW 540

Query: 541 KHGRKGCGVFWLRQARDEVRLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG 600
           KHGRKGCGVFWL+QARDEVRLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG
Sbjct: 541 KHGRKGCGVFWLKQARDEVRLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG 600

Query: 601 LEFLHKYRDFKKSLHQVHHKGKTTGVAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID 660
           LEFLHKYRDFKKSLHQVHHKGKTTGVAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID
Sbjct: 601 LEFLHKYRDFKKSLHQVHHKGKTTGVAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID 660

Query: 661 WHEGPLLNIEQTNLLLNKLQELSMARLRPDFVESNLPPLALSSIRLALAKNLGRAFLEG 687
           WH GPLLN EQTNLLLNKLQELSMA+LRPDFVES+LPPLALSSIRLALAKNLGRAFLEG
Sbjct: 661 WHGGPLLNTEQTNLLLNKLQELSMAKLRPDFVESDLPPLALSSIRLALAKNLGRAFLEG 719

[Close]
BLAST of HG10004558 vs. NCBI nr
Match: KAA0065042.1 (nuclear pore complex protein NUP85 [Cucumis melo var. makuwa])

HSP 1 Score: 1278.5 bits (3307), Expect = 0.0e+00
Identity = 640/719 (89.01%), Postives = 667/719 (92.77%), Query Frame = 0 

Query: 1   MPGPAFDSSPSGALVLSSSEAREVVYPLRHELKPPIARLSISWARGNSFRVSIFKQQSGD 60
           MPGPA DS+PSGALVLSSSEAREVVYP+RHELKPPIARLSISWARGNSFRVSIFKQ SG+
Sbjct: 1   MPGPASDSTPSGALVLSSSEAREVVYPIRHELKPPIARLSISWARGNSFRVSIFKQHSGN 60

Query: 61  HSSDSGDGEVGGQVLEVKIRNGDGEISAAEFRRIAYGSVSPFALLQSRKHMASGLSKMSM 120
           HSSDS D EVGGQVLEVKIRNGDGEISAAEFRRIAYGSVSPFALLQSRKHM SGLSKMSM
Sbjct: 61  HSSDSNDDEVGGQVLEVKIRNGDGEISAAEFRRIAYGSVSPFALLQSRKHMVSGLSKMSM 120

Query: 121 GLARFNPDGWEYLAEYSKDISSIIGNPKSIPSSAIDDPLEI---------LKASW----- 180
           GL+RFNP+GWEYLAEYSKDIS +IGNPKSIPSSAI+DPLEI         LKA+W     
Sbjct: 121 GLSRFNPNGWEYLAEYSKDISLVIGNPKSIPSSAIEDPLEILKKVEEPTCLKAAWELMDV 180

Query: 181 -------------------CEYDSVLSTTQSTIHSKLVDFRKELNNLQVVEDNPSYWDLI 240
                               EYDSVLSTT STIHSKLVDFRKELNNLQVVEDNP YWD+I
Sbjct: 181 FYADKQSHWWLNERLVDWLAEYDSVLSTTLSTIHSKLVDFRKELNNLQVVEDNPRYWDVI 240

Query: 241 LSALAVGWQEIVVKMLRLHGSYQLDQLSNRETENGLVEAVAFLISEMPCMRPELGSGRFG 300
           LSALAVGWQEIVVKMLRLHGSYQLDQLS+RETENGLVEAVAFLISEMP +RPEL SG+FG
Sbjct: 241 LSALAVGWQEIVVKMLRLHGSYQLDQLSSRETENGLVEAVAFLISEMPRLRPELDSGKFG 300

Query: 301 ECFKTKPDFTKAWEKWRSKITKLDGSGFWVHCAHVETRKGLRNMLQIILGNVESLSGATC 360
           +CFKTKPDFTKAWEKWRSKITKLDGSGFWVHC HV+TRKGL+NMLQIILGNVESLSGATC
Sbjct: 301 QCFKTKPDFTKAWEKWRSKITKLDGSGFWVHCTHVQTRKGLQNMLQIILGNVESLSGATC 360

Query: 361 NWMELYISQLLYVRPFAMGLESMYNLAERCMQLKPASNTDRLMGLMIGILGESTEVVLAE 420
           NWMELYISQLLYVRPF+MGLESMYNLAE+CMQLKPASNTDRLM L+IGILGES EVVLAE
Sbjct: 361 NWMELYISQLLYVRPFSMGLESMYNLAEKCMQLKPASNTDRLMALIIGILGESPEVVLAE 420

Query: 421 CSRGFGPWMVTHAMELLTEESDQAETLLHEERYDLGGVSIEELHRLVYAQVLCSHAFTWQ 480
           CSRGFGPWMVTHAMELLTEE+ +AE+LLHEER+DLGGVSIEELHRLVYAQVLCSHAFTWQ
Sbjct: 421 CSRGFGPWMVTHAMELLTEENGEAESLLHEERHDLGGVSIEELHRLVYAQVLCSHAFTWQ 480

Query: 481 IAPIYLTSCAKQGTGFLETLLYSQAVHHNGMLLKNLEICRLYELDSLSSNIMKIAGVYHW 540
           IAPIYLTSCAKQG GFLETLLYSQAV HNG+LLKNLEICRLYEL+SLSSNIMKIAGVYHW
Sbjct: 481 IAPIYLTSCAKQGIGFLETLLYSQAVQHNGVLLKNLEICRLYELNSLSSNIMKIAGVYHW 540

Query: 541 KHGRKGCGVFWLRQARDEVRLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG 600
           KHGRKGCGVFWL+QARDEVRLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG
Sbjct: 541 KHGRKGCGVFWLKQARDEVRLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG 600

Query: 601 LEFLHKYRDFKKSLHQVHHKGKTTGVAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID 660
           LEFLHKYRDFKKSLHQVHHKGKTTGVAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID
Sbjct: 601 LEFLHKYRDFKKSLHQVHHKGKTTGVAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID 660

Query: 661 WHEGPLLNIEQTNLLLNKLQELSMARLRPDFVESNLPPLALSSIRLALAKNLGRAFLEG 687
           WH GPLLN EQTNLLLNKLQELSMA+LRPDFVES+LPPLALSSIRLALAKNLGRAFLEG
Sbjct: 661 WHGGPLLNTEQTNLLLNKLQELSMAKLRPDFVESDLPPLALSSIRLALAKNLGRAFLEG 719

[Close]
BLAST of HG10004558 vs. NCBI nr
Match: XP_004148390.1 (nuclear pore complex protein NUP85 [Cucumis sativus] >KGN62813.1 hypothetical protein Csa_022565 [Cucumis sativus])

HSP 1 Score: 1268.8 bits (3282), Expect = 0.0e+00
Identity = 635/719 (88.32%), Postives = 660/719 (91.79%), Query Frame = 0 

Query: 1   MPGPAFDSSPSGALVLSSSEAREVVYPLRHELKPPIARLSISWARGNSFRVSIFKQQSGD 60
           MPGPA DSSPSGALVLSS EAREVVYP+RHELKPPIARLSISWARGNSFRVSIF Q   +
Sbjct: 1   MPGPASDSSPSGALVLSSWEAREVVYPIRHELKPPIARLSISWARGNSFRVSIFTQHPAN 60

Query: 61  HSSDSGDGEVGGQVLEVKIRNGDGEISAAEFRRIAYGSVSPFALLQSRKHMASGLSKMSM 120
           H+SDS DGEVGGQVLEVKIRNGDGEISAAEFRRIAYGSVSPFALLQSRKHM SGLSKMSM
Sbjct: 61  HTSDSNDGEVGGQVLEVKIRNGDGEISAAEFRRIAYGSVSPFALLQSRKHMVSGLSKMSM 120

Query: 121 GLARFNPDGWEYLAEYSKDISSIIGNPKSIPSSAIDDPLEI---------LKASW----- 180
           GL RFNPDGWEYLAEYSKDISS+IGNPK IPSSAI+DPLEI         LKA+W     
Sbjct: 121 GLPRFNPDGWEYLAEYSKDISSVIGNPKLIPSSAIEDPLEILKKVEEPTCLKAAWELMDV 180

Query: 181 -------------------CEYDSVLSTTQSTIHSKLVDFRKELNNLQVVEDNPSYWDLI 240
                               EYDSVLSTTQSTIHSKLVDF+KELNNLQVVEDNP YWD+I
Sbjct: 181 FYADKQSHWWLNERLVDWLAEYDSVLSTTQSTIHSKLVDFQKELNNLQVVEDNPRYWDVI 240

Query: 241 LSALAVGWQEIVVKMLRLHGSYQLDQLSNRETENGLVEAVAFLISEMPCMRPELGSGRFG 300
           LSALAVGWQEIVVKMLRLHGSYQLDQLS RETENGLVEAVAFLISEMP MRPEL SG+FG
Sbjct: 241 LSALAVGWQEIVVKMLRLHGSYQLDQLSRRETENGLVEAVAFLISEMPRMRPELDSGKFG 300

Query: 301 ECFKTKPDFTKAWEKWRSKITKLDGSGFWVHCAHVETRKGLRNMLQIILGNVESLSGATC 360
           +CFKTKPDFTKAWEKWRSKITKLDGSGFWVHC HV+TRKGL+NML+IILG+VESLSGATC
Sbjct: 301 QCFKTKPDFTKAWEKWRSKITKLDGSGFWVHCTHVQTRKGLQNMLRIILGDVESLSGATC 360

Query: 361 NWMELYISQLLYVRPFAMGLESMYNLAERCMQLKPASNTDRLMGLMIGILGESTEVVLAE 420
           NWMELYISQLLYVRPF+MGLESMYNLAE+CMQLKPASNTDRLM L+IGILGES E+VLAE
Sbjct: 361 NWMELYISQLLYVRPFSMGLESMYNLAEKCMQLKPASNTDRLMALIIGILGESPEIVLAE 420

Query: 421 CSRGFGPWMVTHAMELLTEESDQAETLLHEERYDLGGVSIEELHRLVYAQVLCSHAFTWQ 480
           CSRGFGPWM THAMELL EE+D+AETLLHEER+DLGGVSIEELHRLVYAQVLCSHAFTWQ
Sbjct: 421 CSRGFGPWMATHAMELLIEENDEAETLLHEERHDLGGVSIEELHRLVYAQVLCSHAFTWQ 480

Query: 481 IAPIYLTSCAKQGTGFLETLLYSQAVHHNGMLLKNLEICRLYELDSLSSNIMKIAGVYHW 540
           IAPIYLTSCAKQG GFLETLLYSQAV HNG+LLKNLEICRLYELDSLSSNIMKIAGVYHW
Sbjct: 481 IAPIYLTSCAKQGIGFLETLLYSQAVQHNGVLLKNLEICRLYELDSLSSNIMKIAGVYHW 540

Query: 541 KHGRKGCGVFWLRQARDEVRLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG 600
           KHGRKGCGVFWL+QARDEVRLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG
Sbjct: 541 KHGRKGCGVFWLKQARDEVRLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG 600

Query: 601 LEFLHKYRDFKKSLHQVHHKGKTTGVAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID 660
           LEFLHKYRDFKKSLHQVH KGKTTG AQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID
Sbjct: 601 LEFLHKYRDFKKSLHQVHQKGKTTGAAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID 660

Query: 661 WHEGPLLNIEQTNLLLNKLQELSMARLRPDFVESNLPPLALSSIRLALAKNLGRAFLEG 687
           WH GPLLN EQTNLLLNKLQELSMA+LRPDFVES+LPPLALSSIRLALAKNLGRAFLEG
Sbjct: 661 WHGGPLLNTEQTNLLLNKLQELSMAKLRPDFVESDLPPLALSSIRLALAKNLGRAFLEG 719

[Close]
BLAST of HG10004558 vs. NCBI nr
Match: XP_023537383.1 (nuclear pore complex protein NUP85 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1249.2 bits (3231), Expect = 0.0e+00
Identity = 626/719 (87.07%), Postives = 655/719 (91.10%), Query Frame = 0 

Query: 1   MPGPAFDSSPSGALVLSSSEAREVVYPLRHELKPPIARLSISWARGNSFRVSIFKQQSGD 60
           MP P  DSSPSGALVLSSS  REVVYP+RHE+KPPIARLSISWARGNSFRVSIFKQQ GD
Sbjct: 1   MPAPVSDSSPSGALVLSSSVDREVVYPIRHEVKPPIARLSISWARGNSFRVSIFKQQCGD 60

Query: 61  HSSDSGDGEVGGQVLEVKIRNGDGEISAAEFRRIAYGSVSPFALLQSRKHMASGLSKMSM 120
           +S+ S DGEVGGQVLEVKIRNGD EISAAEFRRIAYGSVSPFALLQSRK+M  GLSKMSM
Sbjct: 61  NSAGSDDGEVGGQVLEVKIRNGDTEISAAEFRRIAYGSVSPFALLQSRKNMVLGLSKMSM 120

Query: 121 GLARFNPDGWEYLAEYSKDISSIIGNPKSIPSSAIDDPLEI---------LKASW----- 180
           GL++FNPDGWEY+AEYSKD+SSI+GNPK++PSSAI+DPLEI         LKA+W     
Sbjct: 121 GLSQFNPDGWEYIAEYSKDVSSILGNPKALPSSAIEDPLEILKKVEEPTCLKAAWELMDV 180

Query: 181 -------------------CEYDSVLSTTQSTIHSKLVDFRKELNNLQVVEDNPSYWDLI 240
                               EYDSVLSTTQSTIHSKLV+F+KEL++LQVVEDNPSYWD+I
Sbjct: 181 FYADKQSHWWLNERLVDWLAEYDSVLSTTQSTIHSKLVNFQKELDDLQVVEDNPSYWDVI 240

Query: 241 LSALAVGWQEIVVKMLRLHGSYQLDQLSNRETENGLVEAVAFLISEMPCMRPELGSGRFG 300
            SALAVGWQEIVVKMLRLHGSYQLDQLSNRETENGLVEAVA L+S+MP MRPEL SGR G
Sbjct: 241 SSALAVGWQEIVVKMLRLHGSYQLDQLSNRETENGLVEAVALLVSKMPRMRPELDSGRLG 300

Query: 301 ECFKTKPDFTKAWEKWRSKITKLDGSGFWVHCAHVETRKGLRNMLQIILGNVESLSGATC 360
           ECFKTKPDFTKAWEKWRS+ITKLDGS FWVHCAHV+TR+GLRNMLQIILGNVESLSGATC
Sbjct: 301 ECFKTKPDFTKAWEKWRSQITKLDGSAFWVHCAHVQTREGLRNMLQIILGNVESLSGATC 360

Query: 361 NWMELYISQLLYVRPFAMGLESMYNLAERCMQLKPASNTDRLMGLMIGILGESTEVVLAE 420
           NWMELYISQLLYVRPF MGLESMYNLAERCMQLK ASNTDRLM LMIGILGESTEVVLAE
Sbjct: 361 NWMELYISQLLYVRPFTMGLESMYNLAERCMQLKKASNTDRLMRLMIGILGESTEVVLAE 420

Query: 421 CSRGFGPWMVTHAMELLTEESDQAETLLHEERYDLGGVSIEELHRLVYAQVLCSHAFTWQ 480
           CSRGFGPWMVTHAMELLTEESDQ E LLHEE YDLGG+SIEELHRLVYAQVLCSHAFTWQ
Sbjct: 421 CSRGFGPWMVTHAMELLTEESDQVEVLLHEELYDLGGISIEELHRLVYAQVLCSHAFTWQ 480

Query: 481 IAPIYLTSCAKQGTGFLETLLYSQAVHHNGMLLKNLEICRLYELDSLSSNIMKIAGVYHW 540
           IAPIYLTSCAKQG GFLETLLY+Q V HNGMLLKNLEICRLYELD LSSNIMKIAGVYHW
Sbjct: 481 IAPIYLTSCAKQGIGFLETLLYNQPVQHNGMLLKNLEICRLYELDDLSSNIMKIAGVYHW 540

Query: 541 KHGRKGCGVFWLRQARDEVRLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG 600
           KHGRKGCGVFWLR+ARDEVRLNKIA QLFDSVGKSISDESFKQWEGLIELLGSESKNTGG
Sbjct: 541 KHGRKGCGVFWLRKARDEVRLNKIALQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG 600

Query: 601 LEFLHKYRDFKKSLHQVHHKGKTTGVAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID 660
           LEFLHKYRDFKKSLHQVHHKGKTTGV QSAVDSLIALMKNPSTPQRFWLPILNDSLKLID
Sbjct: 601 LEFLHKYRDFKKSLHQVHHKGKTTGVVQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID 660

Query: 661 WHEGPLLNIEQTNLLLNKLQELSMARLRPDFVESNLPPLALSSIRLALAKNLGRAFLEG 687
           WHEGPLLN+EQTNLLLNKLQELSMARLRPDFVES+L PLALSSIRLALAKNLGRAFLEG
Sbjct: 661 WHEGPLLNVEQTNLLLNKLQELSMARLRPDFVESDLSPLALSSIRLALAKNLGRAFLEG 719

[Close]
BLAST of HG10004558 vs. ExPASy Swiss-Prot
Match: Q8RXH2 (Nuclear pore complex protein NUP85 OS=Arabidopsis thaliana OX=3702 GN=NUP85 PE=1 SV=1)

HSP 1 Score: 858.6 bits (2217), Expect = 4.8e-248
Identity = 427/718 (59.47%), Postives = 539/718 (75.07%), Query Frame = 0 

Query: 1   MPGPAFDSSPSGALVLSSSEAREVVYPLRHELKPPIARLSISWARGNSFRVSIFKQQSGD 60
           MPG + +S     ++ S+ E   V+YPL + LK P+ RLSISW  GN+ RV++ +     
Sbjct: 1   MPGMSSESGGGELVLFSTKEKTPVLYPLSYGLKSPVHRLSISWGCGNNLRVTVLR---NP 60

Query: 61  HSSDSGDGEVGGQVLEVKIRNGDGEISAAEFRRIAYGSVSPFALLQSRKHMASGLSKMSM 120
              D  DGEVGG+V+ V++   DGEIS  ++RRIAYGSVSPFALLQSR++  S LSKM M
Sbjct: 61  ELRDDDDGEVGGKVVNVRLSGEDGEISDPQWRRIAYGSVSPFALLQSRRNSISSLSKMDM 120

Query: 121 GLARFNPDGWEYLAEYSKDISSIIGNPKSIPSSAIDDPLEI---------LKASW----- 180
             + +    WEY+ EYS+DI S++ N  S+P+  I+DP  +         LKA+W     
Sbjct: 121 SSSLYQTAWWEYVMEYSRDIKSLLSNTISLPAPLIEDPRSVIKNAEEPTSLKAAWELMEL 180

Query: 181 -------------------CEYDSVLSTTQSTIHSKLVDFRKELNNLQVVEDNPSYWDLI 240
                               EYD +LS++  TI+SKL DF+KEL  LQ +ED+P YW+++
Sbjct: 181 FYADKTCLSWLPERLVDWLSEYDILLSSSHPTIYSKLQDFQKELVGLQAIEDDPRYWEVM 240

Query: 241 LSALAVGWQEIVVKMLRLHGSYQLDQLSNRETENGLVEAVAFLISEMPCMRPELGSGRFG 300
            SAL+VGW EIVVK+L LHGSYQLDQL +RETENGLVEAVA LIS+MP MRP+L  G+FG
Sbjct: 241 ASALSVGWLEIVVKLLHLHGSYQLDQLGHRETENGLVEAVAVLISKMPRMRPQLEDGKFG 300

Query: 301 ECFKTKPDFTKAWEKWRSKITKLDGSGFWVHCAHVETRKGLRNMLQIILGNVESLSGATC 360
           EC   KPDF K  E+W+S+ITKL+ S FWV CAH +TR+GLRNML+I++GN + L  ATC
Sbjct: 301 ECSAAKPDFMKTRERWQSQITKLECSAFWVQCAHHQTREGLRNMLKIMIGNADCLRAATC 360

Query: 361 NWMELYISQLLYVRPFAMGLESMYNLAERCMQLKPASNTDRLMGLMIGILGESTEVVLAE 420
           NWMEL++S LLY+RPF  GL+ M++LA++C+Q KP + + +L+ L+IGILGE+TEVVLAE
Sbjct: 361 NWMELFVSHLLYLRPFTKGLDGMHSLAQKCVQSKPVNTSHKLLRLLIGILGENTEVVLAE 420

Query: 421 CSRGFGPWMVTHAMELLTEESDQAETLLHEERYDLGGVSIEELHRLVYAQVLCSHAFTWQ 480
           CS+ FG WMV HAMELLT  S++ E L+HEE+  LGG+++EELHRLVYAQVL SHA TWQ
Sbjct: 421 CSKEFGSWMVAHAMELLTAGSEEGEVLVHEEQRKLGGINMEELHRLVYAQVLSSHALTWQ 480

Query: 481 IAPIYLTSCAKQGTGFLETLLYSQAVHHNGMLLKNLEICRLYELDSLSSNIMKIAGVYHW 540
           IAPIYL SC KQG G LE L Y Q V  N ML+K+LEICRLYEL ++S+ +MKI+GV+HW
Sbjct: 481 IAPIYLASCEKQGLGLLELLFYRQPVQENQMLIKSLEICRLYELSNVSAKLMKISGVHHW 540

Query: 541 KHGRKGCGVFWLRQARDEVRLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG 600
           KHGRKG G+FWL+QARDE  L+ IAQQLFDSVGKS+SDES KQWEGL+ELLGSES+ +GG
Sbjct: 541 KHGRKGSGIFWLQQARDENCLSVIAQQLFDSVGKSLSDESLKQWEGLVELLGSESQISGG 600

Query: 601 LEFLHKYRDFKKSLHQVHHKGKTTGVAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID 660
           L+FLHKYRDFK+SL +V H GKT   A  AV+ L++LMK+PSTPQRFWLP+L+DSLKL++
Sbjct: 601 LDFLHKYRDFKRSL-KVVHDGKTIDAAHEAVERLVSLMKSPSTPQRFWLPLLHDSLKLLN 660

Query: 661 WHEGPLLNIEQTNLLLNKLQELSMARLRPDFVESNLPPLALSSIRLALAKNLGRAFLE 686
           W E  LLN+ QTNL+LNKLQELS+ARLRP F+ES L   A+ S+RLALA NLGRAFLE
Sbjct: 661 WPERSLLNVTQTNLMLNKLQELSIARLRPGFIESELSAQAVGSVRLALATNLGRAFLE 714

[Close]
BLAST of HG10004558 vs. ExPASy Swiss-Prot
Match: Q54NA0 (Nuclear pore complex protein nup85 OS=Dictyostelium discoideum OX=44689 GN=nup85 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 4.8e-14
Identity = 112/569 (19.68%), Postives = 223/569 (39.19%), Query Frame = 0 

Query: 169 YDSVLSTTQSTIHSKLVDF----RKELNN---LQVVED--NPSYWDLILSALAVGWQEIV 228
           Y SV S++ S   ++L+D     RKEL N    Q  +D  +  Y++ I   L  G  + V
Sbjct: 349 YFSVSSSSNSVSPTQLLDCIELERKELLNSIEQQGTQDPMDSEYYNQIARLLVCGCIDQV 408

Query: 229 VKMLRL-----HGSYQLDQLSNRETENGLVEAVAFLISEMPCMRPELGSGRFGECFKTKP 288
           ++ L +       + Q+   S +   N L++    ++S +P  +  +  G     +    
Sbjct: 409 IQQLNILSRAPRSASQIKSTSRKSPINLLID----ILSSIPLKKKSINGGGGAPLYPN-- 468

Query: 289 DFTKAWEKWRSKITKLDGSGFWVHCAHVETRKGLRNML---QIILGNVESLSGATCNWME 348
           +    W KW  +  K+     ++      T +   N+L   +I+LG+ +++     ++++
Sbjct: 469 EHLIQWNKWHQETQKILSQ--YIESGSSSTNQVDENLLPIVKILLGDQQTIMSTCNSFLQ 528

Query: 349 LYISQLLYVRPFAMGLESMYNLAERCMQLKPASNTDRLMGLMIGILGESTEVVLAECSRG 408
           L +S +L+V  +      +  L  +C Q   A  T  +  + +    +  ++ L +  + 
Sbjct: 529 LVVSNILFVE-YTTSTTQLRQLFTQCYQTIQAPTT--VDKIFLSFATKDLDITLKKIFKH 588

Query: 409 FGPWMVTHAMELLTEESDQAETLLHEERYDLGGVSIEELHRLVYAQVLCSHAFTWQIAPI 468
              W+  H  +LL         L + E       +I E     + Q L S +    I   
Sbjct: 589 SPAWLAVHLSDLLYHHPYVMRKLPNSESQ---LTNIREYLLSDFGQSLASDSSLLSIGCN 648

Query: 469 YLTSCAKQGTGFLETLLYSQAVHHNGMLLKNLEICRLYELDSLSSNIMKIAGVYHWKHGR 528
           YL      G   ++  +  Q +H     +K L+  +        ++I K+  +  +K  R
Sbjct: 649 YLKYVKNGGLEMIDQFISRQPIHFEKNAIKMLD--KWATSVETKNSIYKMLSLQDFKRKR 708

Query: 529 KGCGVFWLRQARDEVRLNKIAQQLFDSVGKSISDESFKQWEGLIE--------------- 588
               + WL  A D   +  ++  L ++    ++ E     + L+E               
Sbjct: 709 YAASLNWLMLANDNSHITLLSNYLLEN---QLNSEFLNDLQSLLEKNDEIDCNINNNNNN 768

Query: 589 -----------------LLGSESK----NTGGLEFLHKYRDFKKSLHQVHHKGKTTGVAQ 648
                            ++  E+K    N   L FL +YR+      +   K  ++    
Sbjct: 769 NNNNNSNNRISGNNNNNMIIDENKFEITNNSELIFLIRYRELISLWKERSFKEYSS---- 828

Query: 649 SAVDSLIALMKNPSTPQRFWLPILNDSLKLIDWHEGPLLNIEQTNLLLNKLQELSMARLR 685
               SL  + K+   P+RFWL +L D + L++  +      + T LL + L+E+  + L 
Sbjct: 829 ----SLCLMFKDRVIPKRFWLRLLIDCVPLLESLKNLYFTYQDTLLLQSCLEEIIQSHLF 888

[Close]
BLAST of HG10004558 vs. ExPASy TrEMBL
Match: A0A1S3BCK2 (Nuclear pore complex protein Nup85 OS=Cucumis melo OX=3656 GN=LOC103488180 PE=3 SV=1)

HSP 1 Score: 1279.6 bits (3310), Expect = 0.0e+00
Identity = 641/719 (89.15%), Postives = 667/719 (92.77%), Query Frame = 0 

Query: 1   MPGPAFDSSPSGALVLSSSEAREVVYPLRHELKPPIARLSISWARGNSFRVSIFKQQSGD 60
           MPGPA DSSPSGALVLSSSEAREVVYP+RHELKPPIARLSISWARGNSFRVSIFKQ SG+
Sbjct: 1   MPGPASDSSPSGALVLSSSEAREVVYPIRHELKPPIARLSISWARGNSFRVSIFKQHSGN 60

Query: 61  HSSDSGDGEVGGQVLEVKIRNGDGEISAAEFRRIAYGSVSPFALLQSRKHMASGLSKMSM 120
           HSSDS D EVGGQVLEVKIRNGDGEISAAEFRRIAYGSVSPFALLQSRKHM SGLSKMSM
Sbjct: 61  HSSDSNDDEVGGQVLEVKIRNGDGEISAAEFRRIAYGSVSPFALLQSRKHMVSGLSKMSM 120

Query: 121 GLARFNPDGWEYLAEYSKDISSIIGNPKSIPSSAIDDPLEI---------LKASW----- 180
           GL+RFNP+GWEYLAEYSKDIS +IGNPKSIPSSAI+DPLEI         LKA+W     
Sbjct: 121 GLSRFNPNGWEYLAEYSKDISLVIGNPKSIPSSAIEDPLEILKKVEEPTCLKAAWELMDV 180

Query: 181 -------------------CEYDSVLSTTQSTIHSKLVDFRKELNNLQVVEDNPSYWDLI 240
                               EYDSVLSTT STIHSKLVDFRKELNNLQVVEDNP YWD+I
Sbjct: 181 FYADKQSHWWLNERLVDWLAEYDSVLSTTLSTIHSKLVDFRKELNNLQVVEDNPRYWDVI 240

Query: 241 LSALAVGWQEIVVKMLRLHGSYQLDQLSNRETENGLVEAVAFLISEMPCMRPELGSGRFG 300
           LSALAVGWQEIVVKMLRLHGSYQLDQLS+RETENGLVEAVAFLISEMP +RPEL SG+FG
Sbjct: 241 LSALAVGWQEIVVKMLRLHGSYQLDQLSSRETENGLVEAVAFLISEMPRLRPELDSGKFG 300

Query: 301 ECFKTKPDFTKAWEKWRSKITKLDGSGFWVHCAHVETRKGLRNMLQIILGNVESLSGATC 360
           +CFKTKPDFTKAWEKWRSKITKLDGSGFWVHC HV+TRKGL+NMLQIILGNVESLSGATC
Sbjct: 301 QCFKTKPDFTKAWEKWRSKITKLDGSGFWVHCTHVQTRKGLQNMLQIILGNVESLSGATC 360

Query: 361 NWMELYISQLLYVRPFAMGLESMYNLAERCMQLKPASNTDRLMGLMIGILGESTEVVLAE 420
           NWMELYISQLLYVRPF+MGLESMYNLAE+CMQLKPASNTDRLM L+IGILGES EVVLAE
Sbjct: 361 NWMELYISQLLYVRPFSMGLESMYNLAEKCMQLKPASNTDRLMALIIGILGESPEVVLAE 420

Query: 421 CSRGFGPWMVTHAMELLTEESDQAETLLHEERYDLGGVSIEELHRLVYAQVLCSHAFTWQ 480
           CSRGFGPWMVTHAMELLTEE+ +AE+LLHEER+DLGGVSIEELHRLVYAQVLCSHAFTWQ
Sbjct: 421 CSRGFGPWMVTHAMELLTEENGEAESLLHEERHDLGGVSIEELHRLVYAQVLCSHAFTWQ 480

Query: 481 IAPIYLTSCAKQGTGFLETLLYSQAVHHNGMLLKNLEICRLYELDSLSSNIMKIAGVYHW 540
           IAPIYLTSCAKQG GFLETLLYSQAV HNG+LLKNLEICRLYEL+SLSSNIMKIAGVYHW
Sbjct: 481 IAPIYLTSCAKQGIGFLETLLYSQAVQHNGVLLKNLEICRLYELNSLSSNIMKIAGVYHW 540

Query: 541 KHGRKGCGVFWLRQARDEVRLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG 600
           KHGRKGCGVFWL+QARDEVRLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG
Sbjct: 541 KHGRKGCGVFWLKQARDEVRLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG 600

Query: 601 LEFLHKYRDFKKSLHQVHHKGKTTGVAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID 660
           LEFLHKYRDFKKSLHQVHHKGKTTGVAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID
Sbjct: 601 LEFLHKYRDFKKSLHQVHHKGKTTGVAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID 660

Query: 661 WHEGPLLNIEQTNLLLNKLQELSMARLRPDFVESNLPPLALSSIRLALAKNLGRAFLEG 687
           WH GPLLN EQTNLLLNKLQELSMA+LRPDFVES+LPPLALSSIRLALAKNLGRAFLEG
Sbjct: 661 WHGGPLLNTEQTNLLLNKLQELSMAKLRPDFVESDLPPLALSSIRLALAKNLGRAFLEG 719

[Close]
BLAST of HG10004558 vs. ExPASy TrEMBL
Match: A0A5A7V9P1 (Nuclear pore complex protein Nup85 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003700 PE=3 SV=1)

HSP 1 Score: 1278.5 bits (3307), Expect = 0.0e+00
Identity = 640/719 (89.01%), Postives = 667/719 (92.77%), Query Frame = 0 

Query: 1   MPGPAFDSSPSGALVLSSSEAREVVYPLRHELKPPIARLSISWARGNSFRVSIFKQQSGD 60
           MPGPA DS+PSGALVLSSSEAREVVYP+RHELKPPIARLSISWARGNSFRVSIFKQ SG+
Sbjct: 1   MPGPASDSTPSGALVLSSSEAREVVYPIRHELKPPIARLSISWARGNSFRVSIFKQHSGN 60

Query: 61  HSSDSGDGEVGGQVLEVKIRNGDGEISAAEFRRIAYGSVSPFALLQSRKHMASGLSKMSM 120
           HSSDS D EVGGQVLEVKIRNGDGEISAAEFRRIAYGSVSPFALLQSRKHM SGLSKMSM
Sbjct: 61  HSSDSNDDEVGGQVLEVKIRNGDGEISAAEFRRIAYGSVSPFALLQSRKHMVSGLSKMSM 120

Query: 121 GLARFNPDGWEYLAEYSKDISSIIGNPKSIPSSAIDDPLEI---------LKASW----- 180
           GL+RFNP+GWEYLAEYSKDIS +IGNPKSIPSSAI+DPLEI         LKA+W     
Sbjct: 121 GLSRFNPNGWEYLAEYSKDISLVIGNPKSIPSSAIEDPLEILKKVEEPTCLKAAWELMDV 180

Query: 181 -------------------CEYDSVLSTTQSTIHSKLVDFRKELNNLQVVEDNPSYWDLI 240
                               EYDSVLSTT STIHSKLVDFRKELNNLQVVEDNP YWD+I
Sbjct: 181 FYADKQSHWWLNERLVDWLAEYDSVLSTTLSTIHSKLVDFRKELNNLQVVEDNPRYWDVI 240

Query: 241 LSALAVGWQEIVVKMLRLHGSYQLDQLSNRETENGLVEAVAFLISEMPCMRPELGSGRFG 300
           LSALAVGWQEIVVKMLRLHGSYQLDQLS+RETENGLVEAVAFLISEMP +RPEL SG+FG
Sbjct: 241 LSALAVGWQEIVVKMLRLHGSYQLDQLSSRETENGLVEAVAFLISEMPRLRPELDSGKFG 300

Query: 301 ECFKTKPDFTKAWEKWRSKITKLDGSGFWVHCAHVETRKGLRNMLQIILGNVESLSGATC 360
           +CFKTKPDFTKAWEKWRSKITKLDGSGFWVHC HV+TRKGL+NMLQIILGNVESLSGATC
Sbjct: 301 QCFKTKPDFTKAWEKWRSKITKLDGSGFWVHCTHVQTRKGLQNMLQIILGNVESLSGATC 360

Query: 361 NWMELYISQLLYVRPFAMGLESMYNLAERCMQLKPASNTDRLMGLMIGILGESTEVVLAE 420
           NWMELYISQLLYVRPF+MGLESMYNLAE+CMQLKPASNTDRLM L+IGILGES EVVLAE
Sbjct: 361 NWMELYISQLLYVRPFSMGLESMYNLAEKCMQLKPASNTDRLMALIIGILGESPEVVLAE 420

Query: 421 CSRGFGPWMVTHAMELLTEESDQAETLLHEERYDLGGVSIEELHRLVYAQVLCSHAFTWQ 480
           CSRGFGPWMVTHAMELLTEE+ +AE+LLHEER+DLGGVSIEELHRLVYAQVLCSHAFTWQ
Sbjct: 421 CSRGFGPWMVTHAMELLTEENGEAESLLHEERHDLGGVSIEELHRLVYAQVLCSHAFTWQ 480

Query: 481 IAPIYLTSCAKQGTGFLETLLYSQAVHHNGMLLKNLEICRLYELDSLSSNIMKIAGVYHW 540
           IAPIYLTSCAKQG GFLETLLYSQAV HNG+LLKNLEICRLYEL+SLSSNIMKIAGVYHW
Sbjct: 481 IAPIYLTSCAKQGIGFLETLLYSQAVQHNGVLLKNLEICRLYELNSLSSNIMKIAGVYHW 540

Query: 541 KHGRKGCGVFWLRQARDEVRLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG 600
           KHGRKGCGVFWL+QARDEVRLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG
Sbjct: 541 KHGRKGCGVFWLKQARDEVRLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG 600

Query: 601 LEFLHKYRDFKKSLHQVHHKGKTTGVAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID 660
           LEFLHKYRDFKKSLHQVHHKGKTTGVAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID
Sbjct: 601 LEFLHKYRDFKKSLHQVHHKGKTTGVAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID 660

Query: 661 WHEGPLLNIEQTNLLLNKLQELSMARLRPDFVESNLPPLALSSIRLALAKNLGRAFLEG 687
           WH GPLLN EQTNLLLNKLQELSMA+LRPDFVES+LPPLALSSIRLALAKNLGRAFLEG
Sbjct: 661 WHGGPLLNTEQTNLLLNKLQELSMAKLRPDFVESDLPPLALSSIRLALAKNLGRAFLEG 719

[Close]
BLAST of HG10004558 vs. ExPASy TrEMBL
Match: A0A0A0LLY0 (Nuclear pore complex protein Nup85 OS=Cucumis sativus OX=3659 GN=Csa_2G373560 PE=3 SV=1)

HSP 1 Score: 1268.8 bits (3282), Expect = 0.0e+00
Identity = 635/719 (88.32%), Postives = 660/719 (91.79%), Query Frame = 0 

Query: 1   MPGPAFDSSPSGALVLSSSEAREVVYPLRHELKPPIARLSISWARGNSFRVSIFKQQSGD 60
           MPGPA DSSPSGALVLSS EAREVVYP+RHELKPPIARLSISWARGNSFRVSIF Q   +
Sbjct: 1   MPGPASDSSPSGALVLSSWEAREVVYPIRHELKPPIARLSISWARGNSFRVSIFTQHPAN 60

Query: 61  HSSDSGDGEVGGQVLEVKIRNGDGEISAAEFRRIAYGSVSPFALLQSRKHMASGLSKMSM 120
           H+SDS DGEVGGQVLEVKIRNGDGEISAAEFRRIAYGSVSPFALLQSRKHM SGLSKMSM
Sbjct: 61  HTSDSNDGEVGGQVLEVKIRNGDGEISAAEFRRIAYGSVSPFALLQSRKHMVSGLSKMSM 120

Query: 121 GLARFNPDGWEYLAEYSKDISSIIGNPKSIPSSAIDDPLEI---------LKASW----- 180
           GL RFNPDGWEYLAEYSKDISS+IGNPK IPSSAI+DPLEI         LKA+W     
Sbjct: 121 GLPRFNPDGWEYLAEYSKDISSVIGNPKLIPSSAIEDPLEILKKVEEPTCLKAAWELMDV 180

Query: 181 -------------------CEYDSVLSTTQSTIHSKLVDFRKELNNLQVVEDNPSYWDLI 240
                               EYDSVLSTTQSTIHSKLVDF+KELNNLQVVEDNP YWD+I
Sbjct: 181 FYADKQSHWWLNERLVDWLAEYDSVLSTTQSTIHSKLVDFQKELNNLQVVEDNPRYWDVI 240

Query: 241 LSALAVGWQEIVVKMLRLHGSYQLDQLSNRETENGLVEAVAFLISEMPCMRPELGSGRFG 300
           LSALAVGWQEIVVKMLRLHGSYQLDQLS RETENGLVEAVAFLISEMP MRPEL SG+FG
Sbjct: 241 LSALAVGWQEIVVKMLRLHGSYQLDQLSRRETENGLVEAVAFLISEMPRMRPELDSGKFG 300

Query: 301 ECFKTKPDFTKAWEKWRSKITKLDGSGFWVHCAHVETRKGLRNMLQIILGNVESLSGATC 360
           +CFKTKPDFTKAWEKWRSKITKLDGSGFWVHC HV+TRKGL+NML+IILG+VESLSGATC
Sbjct: 301 QCFKTKPDFTKAWEKWRSKITKLDGSGFWVHCTHVQTRKGLQNMLRIILGDVESLSGATC 360

Query: 361 NWMELYISQLLYVRPFAMGLESMYNLAERCMQLKPASNTDRLMGLMIGILGESTEVVLAE 420
           NWMELYISQLLYVRPF+MGLESMYNLAE+CMQLKPASNTDRLM L+IGILGES E+VLAE
Sbjct: 361 NWMELYISQLLYVRPFSMGLESMYNLAEKCMQLKPASNTDRLMALIIGILGESPEIVLAE 420

Query: 421 CSRGFGPWMVTHAMELLTEESDQAETLLHEERYDLGGVSIEELHRLVYAQVLCSHAFTWQ 480
           CSRGFGPWM THAMELL EE+D+AETLLHEER+DLGGVSIEELHRLVYAQVLCSHAFTWQ
Sbjct: 421 CSRGFGPWMATHAMELLIEENDEAETLLHEERHDLGGVSIEELHRLVYAQVLCSHAFTWQ 480

Query: 481 IAPIYLTSCAKQGTGFLETLLYSQAVHHNGMLLKNLEICRLYELDSLSSNIMKIAGVYHW 540
           IAPIYLTSCAKQG GFLETLLYSQAV HNG+LLKNLEICRLYELDSLSSNIMKIAGVYHW
Sbjct: 481 IAPIYLTSCAKQGIGFLETLLYSQAVQHNGVLLKNLEICRLYELDSLSSNIMKIAGVYHW 540

Query: 541 KHGRKGCGVFWLRQARDEVRLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG 600
           KHGRKGCGVFWL+QARDEVRLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG
Sbjct: 541 KHGRKGCGVFWLKQARDEVRLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG 600

Query: 601 LEFLHKYRDFKKSLHQVHHKGKTTGVAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID 660
           LEFLHKYRDFKKSLHQVH KGKTTG AQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID
Sbjct: 601 LEFLHKYRDFKKSLHQVHQKGKTTGAAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID 660

Query: 661 WHEGPLLNIEQTNLLLNKLQELSMARLRPDFVESNLPPLALSSIRLALAKNLGRAFLEG 687
           WH GPLLN EQTNLLLNKLQELSMA+LRPDFVES+LPPLALSSIRLALAKNLGRAFLEG
Sbjct: 661 WHGGPLLNTEQTNLLLNKLQELSMAKLRPDFVESDLPPLALSSIRLALAKNLGRAFLEG 719

[Close]
BLAST of HG10004558 vs. ExPASy TrEMBL
Match: A0A6J1GK98 (Nuclear pore complex protein Nup85 OS=Cucurbita moschata OX=3662 GN=LOC111454690 PE=3 SV=1)

HSP 1 Score: 1246.5 bits (3224), Expect = 0.0e+00
Identity = 625/719 (86.93%), Postives = 653/719 (90.82%), Query Frame = 0 

Query: 1   MPGPAFDSSPSGALVLSSSEAREVVYPLRHELKPPIARLSISWARGNSFRVSIFKQQSGD 60
           MP P  DSSPSGALVLSSS  REVVYP+RHE+KPPIARLSISWARGNSFRVSIFKQQ GD
Sbjct: 1   MPAPVSDSSPSGALVLSSSVDREVVYPIRHEVKPPIARLSISWARGNSFRVSIFKQQCGD 60

Query: 61  HSSDSGDGEVGGQVLEVKIRNGDGEISAAEFRRIAYGSVSPFALLQSRKHMASGLSKMSM 120
           +S+ S DGEVGGQVLEVKIRNGD EISAAEFRRIAYGSVSPFALLQSRK+M  GLSKMSM
Sbjct: 61  NSAGSDDGEVGGQVLEVKIRNGDTEISAAEFRRIAYGSVSPFALLQSRKNMVLGLSKMSM 120

Query: 121 GLARFNPDGWEYLAEYSKDISSIIGNPKSIPSSAIDDPLEI---------LKASW----- 180
           GL++FNPDGWEY+AEYSKD+SSI+GNPKS+PSSAI+DPLEI         LKA+W     
Sbjct: 121 GLSQFNPDGWEYIAEYSKDVSSILGNPKSLPSSAIEDPLEILKRVEEPACLKAAWELMDV 180

Query: 181 -------------------CEYDSVLSTTQSTIHSKLVDFRKELNNLQVVEDNPSYWDLI 240
                               EYDSVLSTTQSTIHSKLV+F+KEL++LQVVEDNPSYWD+I
Sbjct: 181 FYADKQSHWWLNERLVDWLAEYDSVLSTTQSTIHSKLVNFQKELDDLQVVEDNPSYWDVI 240

Query: 241 LSALAVGWQEIVVKMLRLHGSYQLDQLSNRETENGLVEAVAFLISEMPCMRPELGSGRFG 300
            SALAVGWQEIVVKMLRLHGSYQLDQLSNRETENGLVEAVA L+S+MP MRPEL SGR G
Sbjct: 241 SSALAVGWQEIVVKMLRLHGSYQLDQLSNRETENGLVEAVALLVSKMPRMRPELDSGRLG 300

Query: 301 ECFKTKPDFTKAWEKWRSKITKLDGSGFWVHCAHVETRKGLRNMLQIILGNVESLSGATC 360
           ECFKTKPDFTKAWEKWRS+ITKLDGS FWVHCAHV+TR+GLRNMLQIILGNVESLSGA C
Sbjct: 301 ECFKTKPDFTKAWEKWRSQITKLDGSAFWVHCAHVQTREGLRNMLQIILGNVESLSGANC 360

Query: 361 NWMELYISQLLYVRPFAMGLESMYNLAERCMQLKPASNTDRLMGLMIGILGESTEVVLAE 420
           NWMELYISQLLYVRPF MGLESMYNLAERCMQLK ASNTDRLM LMIGILGESTEVVLAE
Sbjct: 361 NWMELYISQLLYVRPFTMGLESMYNLAERCMQLKKASNTDRLMRLMIGILGESTEVVLAE 420

Query: 421 CSRGFGPWMVTHAMELLTEESDQAETLLHEERYDLGGVSIEELHRLVYAQVLCSHAFTWQ 480
           CSRGFGPWMVTHAMELLTEESDQ E LLHEE YDLGG+SIEELHRLVYAQVLCSHAFTWQ
Sbjct: 421 CSRGFGPWMVTHAMELLTEESDQVEVLLHEELYDLGGISIEELHRLVYAQVLCSHAFTWQ 480

Query: 481 IAPIYLTSCAKQGTGFLETLLYSQAVHHNGMLLKNLEICRLYELDSLSSNIMKIAGVYHW 540
           IAPIYLTSCAKQG GFLETLLY+Q V HNGMLLKNLEICRLYELD LSSNIMKIAGVYHW
Sbjct: 481 IAPIYLTSCAKQGIGFLETLLYNQPVQHNGMLLKNLEICRLYELDGLSSNIMKIAGVYHW 540

Query: 541 KHGRKGCGVFWLRQARDEVRLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG 600
           KHGRKGCGVFWLR+ARDEVRLNKIA QLFDSVGKSISDESFKQWEGLIELLGSESKNTGG
Sbjct: 541 KHGRKGCGVFWLRKARDEVRLNKIALQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG 600

Query: 601 LEFLHKYRDFKKSLHQVHHKGKTTGVAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID 660
           LEFLHKYRDFKKSLH VHHKGKTTGV QSAVDSLIALMKNPSTPQRFWLPILNDSLKLID
Sbjct: 601 LEFLHKYRDFKKSLHHVHHKGKTTGVVQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID 660

Query: 661 WHEGPLLNIEQTNLLLNKLQELSMARLRPDFVESNLPPLALSSIRLALAKNLGRAFLEG 687
           WHEGPLLN+EQTNLLLNKLQELSMARLRPDFVES+L PLALSSIRLALAKNLGRAFLEG
Sbjct: 661 WHEGPLLNVEQTNLLLNKLQELSMARLRPDFVESDLSPLALSSIRLALAKNLGRAFLEG 719

[Close]
BLAST of HG10004558 vs. ExPASy TrEMBL
Match: A0A6J1BR94 (Nuclear pore complex protein Nup85 OS=Momordica charantia OX=3673 GN=LOC111004978 PE=3 SV=1)

HSP 1 Score: 1231.9 bits (3186), Expect = 0.0e+00
Identity = 616/719 (85.67%), Postives = 656/719 (91.24%), Query Frame = 0 

Query: 1   MPGPAFDSSPSGALVLSSSEAREVVYPLRHELKPPIARLSISWARGNSFRVSIFKQQSGD 60
           MPGPA DSS +GAL+LSSSEAREVVYP+RH+LKPPIARLSISWARGNSFRVSIF+QQ G+
Sbjct: 1   MPGPASDSSATGALILSSSEAREVVYPIRHDLKPPIARLSISWARGNSFRVSIFRQQGGE 60

Query: 61  HSSDSGDGEVGGQVLEVKIRNGDGEISAAEFRRIAYGSVSPFALLQSRKHMASGLSKMSM 120
           +S+DS D EVGGQVLEVKIR+GDGEI AAEFRRIAYGSVSPFALLQSRK+MASGLSKMSM
Sbjct: 61  NSADS-DEEVGGQVLEVKIRDGDGEIGAAEFRRIAYGSVSPFALLQSRKNMASGLSKMSM 120

Query: 121 GLARFNPDGWEYLAEYSKDISSIIGNPKSIPSSAIDDPLEI---------LKASW----- 180
           GL+RFNP+GWEY+ EYSKDISSI+GNPKS+PSSAI+DPLE+         LKA+W     
Sbjct: 121 GLSRFNPEGWEYVTEYSKDISSILGNPKSLPSSAIEDPLEVLKKVEEPTCLKAAWELMDV 180

Query: 181 -------------------CEYDSVLSTTQSTIHSKLVDFRKELNNLQVVEDNPSYWDLI 240
                               EYDSVLSTTQST++SKLV+F+KEL+N QVVEDNPSYWD+I
Sbjct: 181 FYADKQSHWWLNERLVDWLAEYDSVLSTTQSTVYSKLVEFQKELHNSQVVEDNPSYWDVI 240

Query: 241 LSALAVGWQEIVVKMLRLHGSYQLDQLSNRETENGLVEAVAFLISEMPCMRPELGSGRFG 300
            SALAVGWQEIVVK+LRLHGSYQLDQLSNRETENGLVEAVA LIS+MP MRPEL SG  G
Sbjct: 241 SSALAVGWQEIVVKLLRLHGSYQLDQLSNRETENGLVEAVAMLISKMPRMRPELNSGGLG 300

Query: 301 ECFKTKPDFTKAWEKWRSKITKLDGSGFWVHCAHVETRKGLRNMLQIILGNVESLSGATC 360
           ECFKTKPDF KAWEKWRS ITKLDGSGFWVHCAH +TR+GLRNMLQIILGNVESLSGATC
Sbjct: 301 ECFKTKPDFIKAWEKWRSHITKLDGSGFWVHCAHGQTREGLRNMLQIILGNVESLSGATC 360

Query: 361 NWMELYISQLLYVRPFAMGLESMYNLAERCMQLKPASNTDRLMGLMIGILGESTEVVLAE 420
            WMELYISQLLYVRPF MGLESMYNLAERCMQL+PASNTDRLMGLMIGILGESTEVVLA+
Sbjct: 361 TWMELYISQLLYVRPFTMGLESMYNLAERCMQLRPASNTDRLMGLMIGILGESTEVVLAK 420

Query: 421 CSRGFGPWMVTHAMELLTEESDQAETLLHEERYDLGGVSIEELHRLVYAQVLCSHAFTWQ 480
           CS GFGPWMVTHAMELLTEESDQAETLLHEER+DLGG+SI ELHRLVYAQVLCSHAFTWQ
Sbjct: 421 CSGGFGPWMVTHAMELLTEESDQAETLLHEERHDLGGISIVELHRLVYAQVLCSHAFTWQ 480

Query: 481 IAPIYLTSCAKQGTGFLETLLYSQAVHHNGMLLKNLEICRLYELDSLSSNIMKIAGVYHW 540
           IAPIYLTSCAKQG GFLETLLY+Q V HNG+LLKNLEICRLYELD LSSNIMKIAGVYHW
Sbjct: 481 IAPIYLTSCAKQGIGFLETLLYNQPVQHNGVLLKNLEICRLYELDGLSSNIMKIAGVYHW 540

Query: 541 KHGRKGCGVFWLRQARDEVRLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG 600
           KHGRKGCGVFWLRQARDE+RLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG
Sbjct: 541 KHGRKGCGVFWLRQARDEIRLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG 600

Query: 601 LEFLHKYRDFKKSLHQVHHKGKTTGVAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID 660
           LEFLHKYRDFKKSL QVH +GKTTGVAQSAVDSLIALMKNPSTPQRFWLPILNDSLKL+D
Sbjct: 601 LEFLHKYRDFKKSLDQVHREGKTTGVAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLLD 660

Query: 661 WHEGPLLNIEQTNLLLNKLQELSMARLRPDFVESNLPPLALSSIRLALAKNLGRAFLEG 687
           W EGPLLN+EQTNLLLNKLQELSMARL+PDFVESNLPPLALSSIRLALAKNLG AFL+G
Sbjct: 661 WPEGPLLNVEQTNLLLNKLQELSMARLQPDFVESNLPPLALSSIRLALAKNLGHAFLDG 718

[Close]
BLAST of HG10004558 vs. TAIR 10
Match: AT4G32910.1 (CONTAINS InterPro DOMAIN/s: Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro:IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 858.6 bits (2217), Expect = 3.4e-249
Identity = 427/718 (59.47%), Postives = 539/718 (75.07%), Query Frame = 0 

Query: 1   MPGPAFDSSPSGALVLSSSEAREVVYPLRHELKPPIARLSISWARGNSFRVSIFKQQSGD 60
           MPG + +S     ++ S+ E   V+YPL + LK P+ RLSISW  GN+ RV++ +     
Sbjct: 1   MPGMSSESGGGELVLFSTKEKTPVLYPLSYGLKSPVHRLSISWGCGNNLRVTVLR---NP 60

Query: 61  HSSDSGDGEVGGQVLEVKIRNGDGEISAAEFRRIAYGSVSPFALLQSRKHMASGLSKMSM 120
              D  DGEVGG+V+ V++   DGEIS  ++RRIAYGSVSPFALLQSR++  S LSKM M
Sbjct: 61  ELRDDDDGEVGGKVVNVRLSGEDGEISDPQWRRIAYGSVSPFALLQSRRNSISSLSKMDM 120

Query: 121 GLARFNPDGWEYLAEYSKDISSIIGNPKSIPSSAIDDPLEI---------LKASW----- 180
             + +    WEY+ EYS+DI S++ N  S+P+  I+DP  +         LKA+W     
Sbjct: 121 SSSLYQTAWWEYVMEYSRDIKSLLSNTISLPAPLIEDPRSVIKNAEEPTSLKAAWELMEL 180

Query: 181 -------------------CEYDSVLSTTQSTIHSKLVDFRKELNNLQVVEDNPSYWDLI 240
                               EYD +LS++  TI+SKL DF+KEL  LQ +ED+P YW+++
Sbjct: 181 FYADKTCLSWLPERLVDWLSEYDILLSSSHPTIYSKLQDFQKELVGLQAIEDDPRYWEVM 240

Query: 241 LSALAVGWQEIVVKMLRLHGSYQLDQLSNRETENGLVEAVAFLISEMPCMRPELGSGRFG 300
            SAL+VGW EIVVK+L LHGSYQLDQL +RETENGLVEAVA LIS+MP MRP+L  G+FG
Sbjct: 241 ASALSVGWLEIVVKLLHLHGSYQLDQLGHRETENGLVEAVAVLISKMPRMRPQLEDGKFG 300

Query: 301 ECFKTKPDFTKAWEKWRSKITKLDGSGFWVHCAHVETRKGLRNMLQIILGNVESLSGATC 360
           EC   KPDF K  E+W+S+ITKL+ S FWV CAH +TR+GLRNML+I++GN + L  ATC
Sbjct: 301 ECSAAKPDFMKTRERWQSQITKLECSAFWVQCAHHQTREGLRNMLKIMIGNADCLRAATC 360

Query: 361 NWMELYISQLLYVRPFAMGLESMYNLAERCMQLKPASNTDRLMGLMIGILGESTEVVLAE 420
           NWMEL++S LLY+RPF  GL+ M++LA++C+Q KP + + +L+ L+IGILGE+TEVVLAE
Sbjct: 361 NWMELFVSHLLYLRPFTKGLDGMHSLAQKCVQSKPVNTSHKLLRLLIGILGENTEVVLAE 420

Query: 421 CSRGFGPWMVTHAMELLTEESDQAETLLHEERYDLGGVSIEELHRLVYAQVLCSHAFTWQ 480
           CS+ FG WMV HAMELLT  S++ E L+HEE+  LGG+++EELHRLVYAQVL SHA TWQ
Sbjct: 421 CSKEFGSWMVAHAMELLTAGSEEGEVLVHEEQRKLGGINMEELHRLVYAQVLSSHALTWQ 480

Query: 481 IAPIYLTSCAKQGTGFLETLLYSQAVHHNGMLLKNLEICRLYELDSLSSNIMKIAGVYHW 540
           IAPIYL SC KQG G LE L Y Q V  N ML+K+LEICRLYEL ++S+ +MKI+GV+HW
Sbjct: 481 IAPIYLASCEKQGLGLLELLFYRQPVQENQMLIKSLEICRLYELSNVSAKLMKISGVHHW 540

Query: 541 KHGRKGCGVFWLRQARDEVRLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG 600
           KHGRKG G+FWL+QARDE  L+ IAQQLFDSVGKS+SDES KQWEGL+ELLGSES+ +GG
Sbjct: 541 KHGRKGSGIFWLQQARDENCLSVIAQQLFDSVGKSLSDESLKQWEGLVELLGSESQISGG 600

Query: 601 LEFLHKYRDFKKSLHQVHHKGKTTGVAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID 660
           L+FLHKYRDFK+SL +V H GKT   A  AV+ L++LMK+PSTPQRFWLP+L+DSLKL++
Sbjct: 601 LDFLHKYRDFKRSL-KVVHDGKTIDAAHEAVERLVSLMKSPSTPQRFWLPLLHDSLKLLN 660

Query: 661 WHEGPLLNIEQTNLLLNKLQELSMARLRPDFVESNLPPLALSSIRLALAKNLGRAFLE 686
           W E  LLN+ QTNL+LNKLQELS+ARLRP F+ES L   A+ S+RLALA NLGRAFLE
Sbjct: 661 WPERSLLNVTQTNLMLNKLQELSIARLRPGFIESELSAQAVGSVRLALATNLGRAFLE 714

The following BLAST results are available for this feature:
BLAST of HG10004558 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038885681.10.0e+0090.40nuclear pore complex protein NUP85 isoform X1 [Benincasa hispida][more]
XP_008445011.10.0e+0089.15PREDICTED: nuclear pore complex protein NUP85 [Cucumis melo] >XP_016899979.1 PRE... [more]
KAA0065042.10.0e+0089.01nuclear pore complex protein NUP85 [Cucumis melo var. makuwa][more]
XP_004148390.10.0e+0088.32nuclear pore complex protein NUP85 [Cucumis sativus] >KGN62813.1 hypothetical pr... [more]
XP_023537383.10.0e+0087.07nuclear pore complex protein NUP85 [Cucurbita pepo subsp. pepo][more]
BLAST of HG10004558 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8RXH24.8e-24859.47Nuclear pore complex protein NUP85 OS=Arabidopsis thaliana OX=3702 GN=NUP85 PE=1... [more]
Q54NA04.8e-1419.68Nuclear pore complex protein nup85 OS=Dictyostelium discoideum OX=44689 GN=nup85... [more]
BLAST of HG10004558 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BCK20.0e+0089.15Nuclear pore complex protein Nup85 OS=Cucumis melo OX=3656 GN=LOC103488180 PE=3 ... [more]
A0A5A7V9P10.0e+0089.01Nuclear pore complex protein Nup85 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... [more]
A0A0A0LLY00.0e+0088.32Nuclear pore complex protein Nup85 OS=Cucumis sativus OX=3659 GN=Csa_2G373560 PE... [more]
A0A6J1GK980.0e+0086.93Nuclear pore complex protein Nup85 OS=Cucurbita moschata OX=3662 GN=LOC111454690... [more]
A0A6J1BR940.0e+0085.67Nuclear pore complex protein Nup85 OS=Momordica charantia OX=3673 GN=LOC11100497... [more]
BLAST of HG10004558 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G32910.13.4e-24959.47CONTAINS InterPro DOMAIN/s: Nuclear pore complex protein, Nucleoporin Nup85-like... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011502Nucleoporin Nup85-likePFAMPF07575Nucleopor_Nup85coord: 166..648
e-value: 7.0E-121
score: 404.6
IPR011502Nucleoporin Nup85-likePANTHERPTHR13373FROUNT PROTEIN-RELATEDcoord: 22..685

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10004558.1HG10004558.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006606 protein import into nucleus
biological_process GO:0009737 response to abscisic acid
cellular_component GO:0031965 nuclear membrane
cellular_component GO:0031080 nuclear pore outer ring
molecular_function GO:0017056 structural constituent of nuclear pore