HG10004488 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10004488
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	B-like cyclin
Location	Chr08: 17562901 .. 17566149 (-)
RNA-Seq Expression	HG10004488
Synteny	HG10004488

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGGCCCACCTCCCCAGACAGCAGCTCCTTCTCCTTCTGCCATAGTACACGTGTCAGCATGGGACGAAAAAGACAGCATCCCAGTACGTTTGGGCTACTCTTCGGTTCGTGTGCTAAATTACCATTCTAACCTTCTTCCACTAACTAAATTACCACATCCACCACCAGCACGCCCCCCACTTCTTCTCTGAAAGGACGTGACGCTTATTTTGTTATTTCCTATAGGGACTGCCATTTCAAATATTTATCGCACCGTATTATTATTTTAATTAATGCAATTCCTAAAATAAAAGAAACAACAGATTTCCAAAATATTTTTGCCCAAAGAAGAAAAAAGAGAGAAATAAAAGAAGAAATACACTGCATCTCCACTAGATAATTTCATTCTATCCTAAAATAATCAACAAATAAATACTTTTAAATTAAACGATAAAAATAATATCAATAATCATTGAGACGTTCAAATATAAAAAAAATGAGCTTAAGCGATAAAAGTCTATCGCATTTTATCACCGATAAATAGTGAATTTTTTTTTATATTTGTTAATAAATTGTTATTTTTTCTATTTATAATAATTTTTCATAATCCATTTAAATTTTATTTTTAAAATATGACTATGGATTCAAATGTTTTCTTAAAGGATAGGAAAAGAATCACAAACAATTATGATAAAATAAACATAGTTTTCAAAAACTAAAAATCACTGATAAAATAGTTATCAAGTCAGGCCTAAATTATTCGTTTCTTATCACTCTATTATAAGTTTTAGAGGTGTCTAATAAATTCTTTAACTTAAACTTGTAATTTAATTTTCTTTTCTTTGAACGTTGGGATGAGAAAGAGACAATTTTAAACCCTATTCAGTTAAGTAATAATTAAGGTGACATCAAAGTCTATAATTTAAACATGTCATAATTTTTTGGAATGTCGGCAAAGTTCTCTTTAGATACGATGGAAAGAGACGACGAGACACGTCTATAGAAAACTACCAACGTGTAAAACCGACAATATTTACTATCAACGTGTAGAACCGACAATATTTTAAGTACTAAAATGGTAATTTAGTTATTAGACACTACTAGATATTCAGAAGAAATTATAATAGTATCTCAAAAGTATATATAAATAGATCATTTGTGAAATACAAAGATACATTTGAAGATTATTAGGAGACAACCACACACTTGTGGAAGAATTTTGATTTATTATGATTTGAGAGAAATTAGAAAAAAGAAAAAAGAAAAAAAGAGGGGAGAGTTGGGTTGGGTTGGGTTGGGTTGGGTGGGTTATTGCGAATGTCAGAGAAGGGACCAATAGCTTCTCTAACCTGCCTTCTTCTGTATATGTCTCTCACACCATACACAGAACAAAATCTTGGAATTGCCCTTCTCTAAATCCAGCCTGTAGTATTACCAAGAGGGAGATTTTTCTTTTCTTTTTCTTTTCTATCACTTTCGTTTTCCCCTTCTTCTGATTCCTTATATGTCCCTTCCTCATCTTCTTTCTCTCTCCCTCTCCCCACTTTAACCTAAAAAGGGTCGCCTTTTTCATCTCCTTCATAAGCTCCTTCTCTTTTCCCACAGTCTTTTCAGGCCCCAACTTGCAGAAACGGAGGTGGAAGGAAAGAAACAAATAGATTACAGTGTAAAAATAGAAGAAAAAACTTAAACTAAGAAGAAGAACAAGGCCCTCTCTCTGCTTCCCTGCCCTCTGTTACACAATACCTTTTTTGTTCTTATTGCCTTAAAATCCAATTCTTTGTTGAAAAAAAGATTAACAAAAAAACCTCTCTTCTTCTTCTCAATCATCATCACCATCATCATCTGAAAAATCTCTTCAAATTTACATAATCAGGCGGCTTTTGGTCTCTGTTTTTCGCTTTGATTGGGATTGGAACAGAGAGAGGGGAAGAGAAAAAAAAAGGGGAAAAGGGATTTTTTAGCAATGGCTCCTAGTTTTGACCTTGCTGTTTCTAACCTTTTATGTGCGGAAGAGAATTGCATTTTCGATAATAACGATGATGATGATGAAACAGTAGTTGAGGAGTTTGTGATGGCTCCTTATTATCTTAGAACTCGTCGGAATCGGAACCCCCACCGCGGCGGCGGTGGTGGAGGTGATGGGTTTCCGTTTATGAGCGATGAATGTTTGATTGAAATGGTTGAGAAGGAAACCCACCACTTACCTGTTGATGGGTACCTCGTGAAGTTGCAGAACGGCGAGTTGGATGTTGGAGCAAGAAAAGAGGCCGTCGATTGGATTGAAAAGGTGGTTGTTTCATTTTTATTTGAATCTTGATTTCGATCGTTTTGATTTTCCCTTATGGATGGTCTCGATTCCTGATTGTTCTTGTATTTTGGATAAGAAATGCTTGACTTGAAGATTTTGGTCTGATTTTGGCAGATTATTATTGTTGTGGTTGTTATTAAAGTTTTGATTCTTTATTTCTGTAAGTTTTTCTGATCGTTTAAGGTTTTTTCTTTTCCCTTTACCTGAGGTTCTGATAGCAAAGTGAGTCTGAGAGAGTTTAATTGCATCCTCTTCTATCTCTCTCTCTCTGTGATTGTTTAAAGTGTTTATCAAAATCCCTTTCTTCTGTTCTTCATTGATCAAAGTTTAATATCCAAACCTATTTCTTCTTTTTCTTGGATGAACAGGTGAGTGCTCATTTCAGTTTTGGACCTCTCTGTACATACTTAGCTGTAAACTACTTGGATCGTTTCCTCTCCGCTTATGATCTACCCGTAAGGATGATTGCCTTCGGTTATCGGTAATTCGTCGTTTCACACGACATCATGTCTAATTGCTATTGTTCCATTTGCAGAAAGGCAAAGCTTGGACAATGCAGTTGCTTGCCGTGGCATGTATGTCCCTTGCAGCCAAAATGGAGGAGACTGAAGTCCCACTCTCTTTGGATTTACAGGTTAGAAGACCATTTCAATACTGTGTTGCTCGGAAACGATTTCAGAGTTTATGTTTGAGATAGCATTTCCCTTATAACGATTGAGTTCAATCTCAGGTGGGTGGATCAAAATTTGTGTTTGAAGCAAGAACCATTGAAAGAATGGAGCTTTTAGTCTTGACAACATTGGGATGGAGAATGCAAGCAGTTACTCCTTTCTCGTTTATCGATCATTACCTTCGCAAGATTCACGATGACGATCTCTCTATCAAAATGTCGATCACTCGATCAATTCATCTACTCTTGAACATAATACAAGGTCCTCTCTCTTTCTTACACTAG

mRNA sequence

ATGATGGGCCCACCTCCCCAGACAGCAGCTCCTTCTCCTTCTGCCATAGTACACGTGTCAGCATGGGACGAAAAAGACAGCATCCCAAGAGAGGGGAAGAGAAAAAAAAAGGGGAAAAGGGATTTTTTAGCAATGGCTCCTAGTTTTGACCTTGCTGTTTCTAACCTTTTATGTGCGGAAGAGAATTGCATTTTCGATAATAACGATGATGATGATGAAACAGTAGTTGAGGAGTTTGTGATGGCTCCTTATTATCTTAGAACTCGTCGGAATCGGAACCCCCACCGCGGCGGCGGTGGTGGAGGTGATGGGTTTCCGTTTATGAGCGATGAATGTTTGATTGAAATGGTTGAGAAGGAAACCCACCACTTACCTGTTGATGGGTACCTCGTGAAGTTGCAGAACGGCGAGTTGGATGTTGGAGCAAGAAAAGAGGCCGTCGATTGGATTGAAAAGGTGAGTGCTCATTTCAGTTTTGGACCTCTCTGTACATACTTAGCTGTAAACTACTTGGATCGTTTCCTCTCCGCTTATGATCTACCCAAAGGCAAAGCTTGGACAATGCAGTTGCTTGCCGTGGCATGTATGTCCCTTGCAGCCAAAATGGAGGAGACTGAAGTCCCACTCTCTTTGGATTTACAGGTGGGTGGATCAAAATTTGTGTTTGAAGCAAGAACCATTGAAAGAATGGAGCTTTTAGTCTTGACAACATTGGGATGGAGAATGCAAGCAGTTACTCCTTTCTCGTTTATCGATCATTACCTTCGCAAGATTCACGATGACGATCTCTCTATCAAAATGTCGATCACTCGATCAATTCATCTACTCTTGAACATAATACAAGGTCCTCTCTCTTTCTTACACTAG

Coding sequence (CDS)

ATGATGGGCCCACCTCCCCAGACAGCAGCTCCTTCTCCTTCTGCCATAGTACACGTGTCAGCATGGGACGAAAAAGACAGCATCCCAAGAGAGGGGAAGAGAAAAAAAAAGGGGAAAAGGGATTTTTTAGCAATGGCTCCTAGTTTTGACCTTGCTGTTTCTAACCTTTTATGTGCGGAAGAGAATTGCATTTTCGATAATAACGATGATGATGATGAAACAGTAGTTGAGGAGTTTGTGATGGCTCCTTATTATCTTAGAACTCGTCGGAATCGGAACCCCCACCGCGGCGGCGGTGGTGGAGGTGATGGGTTTCCGTTTATGAGCGATGAATGTTTGATTGAAATGGTTGAGAAGGAAACCCACCACTTACCTGTTGATGGGTACCTCGTGAAGTTGCAGAACGGCGAGTTGGATGTTGGAGCAAGAAAAGAGGCCGTCGATTGGATTGAAAAGGTGAGTGCTCATTTCAGTTTTGGACCTCTCTGTACATACTTAGCTGTAAACTACTTGGATCGTTTCCTCTCCGCTTATGATCTACCCAAAGGCAAAGCTTGGACAATGCAGTTGCTTGCCGTGGCATGTATGTCCCTTGCAGCCAAAATGGAGGAGACTGAAGTCCCACTCTCTTTGGATTTACAGGTGGGTGGATCAAAATTTGTGTTTGAAGCAAGAACCATTGAAAGAATGGAGCTTTTAGTCTTGACAACATTGGGATGGAGAATGCAAGCAGTTACTCCTTTCTCGTTTATCGATCATTACCTTCGCAAGATTCACGATGACGATCTCTCTATCAAAATGTCGATCACTCGATCAATTCATCTACTCTTGAACATAATACAAGGTCCTCTCTCTTTCTTACACTAG

Protein sequence

MMGPPPQTAAPSPSAIVHVSAWDEKDSIPREGKRKKKGKRDFLAMAPSFDLAVSNLLCAEENCIFDNNDDDDETVVEEFVMAPYYLRTRRNRNPHRGGGGGGDGFPFMSDECLIEMVEKETHHLPVDGYLVKLQNGELDVGARKEAVDWIEKVSAHFSFGPLCTYLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKMEETEVPLSLDLQVGGSKFVFEARTIERMELLVLTTLGWRMQAVTPFSFIDHYLRKIHDDDLSIKMSITRSIHLLLNIIQGPLSFLH

Homology

[Close]

BLAST of HG10004488 vs. NCBI nr
Match: XP_038886634.1 (cyclin-D4-1-like [Benincasa hispida])

HSP 1 Score: 457.2 bits (1175), Expect = 1.0e-124
Identity = 224/238 (94.12%), Postives = 230/238 (96.64%), Query Frame = 0


Query: 45  MAPSFDLAVSNLLCAEENCIFDNNDDDDETVVEEFVMAPYYLRTRRNRNPHRGGGGGGDG 104
           MAPSFDLAVSNLLCAEENCIFDNNDDDDETVVEEFVMAPYYLRTR NRNPHR GGGG DG
Sbjct: 1   MAPSFDLAVSNLLCAEENCIFDNNDDDDETVVEEFVMAPYYLRTRWNRNPHR-GGGGDDG 60

Query: 105 FPFMSDECLIEMVEKETHHLPVDGYLVKLQNGELDVGARKEAVDWIEKVSAHFSFGPLCT 164
            PFMSDECLIEMVEKETHHLPVDGY +KLQNGELDVGARKEAVDWI+KVSAHFSFG LCT
Sbjct: 61  LPFMSDECLIEMVEKETHHLPVDGYFMKLQNGELDVGARKEAVDWIQKVSAHFSFGSLCT 120

Query: 165 YLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKMEETEVPLSLDLQVGGSKFVFEA 224
           YLAVNYLDRFLSAYDLPKGKAWTMQLLAVAC+SLAAK+EETEVPLSLDLQVGGSKFVFEA
Sbjct: 121 YLAVNYLDRFLSAYDLPKGKAWTMQLLAVACLSLAAKLEETEVPLSLDLQVGGSKFVFEA 180

Query: 225 RTIERMELLVLTTLGWRMQAVTPFSFIDHYLRKIHDDDLSIKMSITRSIHLLLNIIQG 283
           RTIERMELLVLTTLGWRMQAVTPFSFIDHYLRKI +D+LSIKM ITRSIHLLLNIIQG
Sbjct: 181 RTIERMELLVLTTLGWRMQAVTPFSFIDHYLRKIIEDELSIKMLITRSIHLLLNIIQG 237

[Close]

BLAST of HG10004488 vs. NCBI nr
Match: XP_004152610.1 (cyclin-D4-1 [Cucumis sativus] >KGN62735.1 hypothetical protein Csa_021782 [Cucumis sativus])

HSP 1 Score: 449.1 bits (1154), Expect = 2.8e-122
Identity = 223/238 (93.70%), Postives = 225/238 (94.54%), Query Frame = 0


Query: 45  MAPSFDLAVSNLLCAEENCIFDNNDDDDETVVEEFVMAPYYLRTRRNRNPHRGGGGGGDG 104
           MAPSFDLAVS+LLCAEENCIFDNND DDETVVEEFVMAPYYLRT RNRN  R  GGGGDG
Sbjct: 1   MAPSFDLAVSSLLCAEENCIFDNNDGDDETVVEEFVMAPYYLRTGRNRNSRR--GGGGDG 60

Query: 105 FPFMSDECLIEMVEKETHHLPVDGYLVKLQNGELDVGARKEAVDWIEKVSAHFSFGPLCT 164
             FMSDECLIEMVEKE  HLPVDGYLVKLQNGELDVGARKEAVDWIEKVSAHFSFGPLCT
Sbjct: 61  LLFMSDECLIEMVEKEAQHLPVDGYLVKLQNGELDVGARKEAVDWIEKVSAHFSFGPLCT 120

Query: 165 YLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKMEETEVPLSLDLQVGGSKFVFEA 224
           YLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAK+EETEVPLSLDLQVGGSKFVFEA
Sbjct: 121 YLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKLEETEVPLSLDLQVGGSKFVFEA 180

Query: 225 RTIERMELLVLTTLGWRMQAVTPFSFIDHYLRKIHDDDLSIKMSITRSIHLLLNIIQG 283
           RTIERMELLVLTTLGWRMQAVTPFSFIDHYL KIHDD LSIKMSI RSIHLLLNIIQG
Sbjct: 181 RTIERMELLVLTTLGWRMQAVTPFSFIDHYLHKIHDDKLSIKMSIARSIHLLLNIIQG 236

[Close]

BLAST of HG10004488 vs. NCBI nr
Match: XP_008444892.1 (PREDICTED: cyclin-D4-1-like [Cucumis melo] >KAA0065111.1 cyclin-D4-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 448.0 bits (1151), Expect = 6.3e-122
Identity = 221/238 (92.86%), Postives = 224/238 (94.12%), Query Frame = 0


Query: 45  MAPSFDLAVSNLLCAEENCIFDNNDDDDETVVEEFVMAPYYLRTRRNRNPHRGGGGGGDG 104
           MAPSFDLAVSNLLCAEENCIFDNND DDETVVEEFVMAPYYLRT RNRN  R  GGGG+G
Sbjct: 1   MAPSFDLAVSNLLCAEENCIFDNNDGDDETVVEEFVMAPYYLRTGRNRNYRR--GGGGEG 60

Query: 105 FPFMSDECLIEMVEKETHHLPVDGYLVKLQNGELDVGARKEAVDWIEKVSAHFSFGPLCT 164
            PFMSDECLIEMVEKE  HLPVDGYLVKLQNGELDVGARKEAVDWIEKVS HFSFGPLCT
Sbjct: 61  LPFMSDECLIEMVEKEAQHLPVDGYLVKLQNGELDVGARKEAVDWIEKVSVHFSFGPLCT 120

Query: 165 YLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKMEETEVPLSLDLQVGGSKFVFEA 224
           YLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAK+EETEVPLSLDLQVGGSKFVFEA
Sbjct: 121 YLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKLEETEVPLSLDLQVGGSKFVFEA 180

Query: 225 RTIERMELLVLTTLGWRMQAVTPFSFIDHYLRKIHDDDLSIKMSITRSIHLLLNIIQG 283
           RTIERMELLVLTTLGWRMQAVTPFSFIDHYL +IHDD LSIKM I RSIHLLLNIIQG
Sbjct: 181 RTIERMELLVLTTLGWRMQAVTPFSFIDHYLHRIHDDQLSIKMLIARSIHLLLNIIQG 236

[Close]

BLAST of HG10004488 vs. NCBI nr
Match: XP_022132304.1 (cyclin-D4-1-like [Momordica charantia])

HSP 1 Score: 408.7 bits (1049), Expect = 4.2e-110
Identity = 201/243 (82.72%), Postives = 219/243 (90.12%), Query Frame = 0


Query: 45  MAPSFDLAVSNLLCAEENCIFDNNDDDDETVVEEFVMAPYYLRT-----RRNRNPHRGGG 104
           MAP+FDL V +LLCAE+NCIFDNNDDDDET+ EEFV+ PYYLRT     RRNR P  GG 
Sbjct: 1   MAPNFDLGVGSLLCAEDNCIFDNNDDDDETLEEEFVLPPYYLRTNGTRSRRNRTP-CGGC 60

Query: 105 GGGDGFPFMSDECLIEMVEKETHHLPVDGYLVKLQNGELDVGARKEAVDWIEKVSAHFSF 164
           G G+ FPF+SDECL  MVEKETHH+PVDGYL KLQNGELDVGAR++AVDWI KVSAHFSF
Sbjct: 61  GDGERFPFVSDECLTGMVEKETHHVPVDGYLSKLQNGELDVGARRDAVDWIGKVSAHFSF 120

Query: 165 GPLCTYLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKMEETEVPLSLDLQVGGSK 224
           GPL TYLAVNYLDRFLSAYDLPKGKAWTMQLLAVACM+LAAK+EETEVPLSLDLQVGGSK
Sbjct: 121 GPLSTYLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMALAAKLEETEVPLSLDLQVGGSK 180

Query: 225 FVFEARTIERMELLVLTTLGWRMQAVTPFSFIDHYLRKIHDDDLSIKMSITRSIHLLLNI 283
           FVFEARTIERMELLVLTTLGWRMQAVTPFSFIDH LRKI DD++++K S+ RSIHL+LNI
Sbjct: 181 FVFEARTIERMELLVLTTLGWRMQAVTPFSFIDHCLRKIQDDEIAVKTSLGRSIHLVLNI 240

[Close]

BLAST of HG10004488 vs. NCBI nr
Match: KAG6585354.1 (Cyclin-D4-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 396.4 bits (1017), Expect = 2.2e-106
Identity = 197/238 (82.77%), Postives = 212/238 (89.08%), Query Frame = 0


Query: 45  MAPSFDLAVSNLLCAEENCIFDNNDDDDETVVEEFVMAPYYLRTRRNRNPHRGGGGGGDG 104
           MAPSFDLAV+NLLCAEENCIFD+NDDDD       ++APY L +   ++   GGG GGDG
Sbjct: 1   MAPSFDLAVTNLLCAEENCIFDDNDDDD------CLVAPYVLTSNGFQSWRHGGGHGGDG 60

Query: 105 FPFMSDECLIEMVEKETHHLPVDGYLVKLQNGELDVGARKEAVDWIEKVSAHFSFGPLCT 164
           FPF SDECLIEMVEKETHHLPVDGYL+KLQNGELDVGARK+AVDWIE+VSA F+FGPLCT
Sbjct: 61  FPFTSDECLIEMVEKETHHLPVDGYLMKLQNGELDVGARKDAVDWIEQVSARFNFGPLCT 120

Query: 165 YLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKMEETEVPLSLDLQVGGSKFVFEA 224
           YLAVNY+DRFLSAY LPKGKAWTMQLLAVAC+SLAAK+EETEVP+SLDLQVGGSKFVFEA
Sbjct: 121 YLAVNYMDRFLSAYTLPKGKAWTMQLLAVACLSLAAKLEETEVPISLDLQVGGSKFVFEA 180

Query: 225 RTIERMELLVLTTLGWRMQAVTPFSFIDHYLRKIHDDDLSIKMSITRSIHLLLNIIQG 283
           RTIERMELLVLTTLGWRMQAVTPFSFIDHYL KIH DD   K SITRSI LLLNIIQG
Sbjct: 181 RTIERMELLVLTTLGWRMQAVTPFSFIDHYLGKIHHDD---KTSITRSIRLLLNIIQG 229

[Close]

BLAST of HG10004488 vs. ExPASy Swiss-Prot
Match: Q6YXH8 (Cyclin-D4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-1 PE=2 SV=2)

HSP 1 Score: 216.1 bits (549), Expect = 5.3e-55
Identity = 120/245 (48.98%), Postives = 162/245 (66.12%), Query Frame = 0


Query: 43  LAMAPSFDLAVSNLLCAEE-NCIFDNNDDDDETVVEEFVMAPYYLRTRRNRNPHRGGGGG 102
           +A   S+++A S LLCAE+ + +     +++E   EE V+A    R      P      G
Sbjct: 1   MAALTSYEMAASILLCAEDSSSVLGFGGEEEEE--EEDVVAGKRARCAGPPPPPCVDVAG 60

Query: 103 GDGFPFMSDECLIEMVEKETHHLPVDGYLVKLQ----NGELDVGARKEAVDWIEKVSAHF 162
            D F   S+EC+  +VE E  H+P + Y  +L+    +G+LD+  R +A+DWI KV +++
Sbjct: 61  VD-FAVPSEECVARLVETEADHMPREDYAERLRAGGGDGDLDLRVRMDAIDWIWKVHSYY 120

Query: 163 SFGPLCTYLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKMEETEVPLSLDLQVGG 222
           SF PL   LAVNYLDRFLS Y LP GK W  QLLAVAC+SLAAKMEET+VP SLDLQVG 
Sbjct: 121 SFAPLTACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEETDVPQSLDLQVGE 180

Query: 223 SKFVFEARTIERMELLVLTTLGWRMQAVTPFSFIDHYLRKIHDDDLSIKMSITRSIHLLL 282
            ++VFEA+TI+RMELLVL+TL WRMQAVTPFS++D++LR+++  D     S   S  L+L
Sbjct: 181 ERYVFEAKTIQRMELLVLSTLKWRMQAVTPFSYVDYFLRELNGGDPPSGRSALLSSELIL 240

[Close]

BLAST of HG10004488 vs. ExPASy Swiss-Prot
Match: Q4KYM5 (Cyclin-D4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-2 PE=2 SV=2)

HSP 1 Score: 210.7 bits (535), Expect = 2.2e-53
Identity = 116/249 (46.59%), Postives = 156/249 (62.65%), Query Frame = 0


Query: 45  MAPS----FDLAVSNLLCAEENCIFDNNDDDDETVVEEFVMAPYYLRTRRNRNPHRGGGG 104
           MAPS     D A S LLCAE+N      +D++  V E        +          G GG
Sbjct: 1   MAPSSSSCHDAAASMLLCAEDNSSILWLEDEEGEVGERRSGGCRSMVGDLAAGGGGGSGG 60

Query: 105 GG-----DGFPFMSDECLIEMVEKETHHLPVDGYLVKLQ--NGELDVGARKEAVDWIEKV 164
           GG     D FP  S+EC+  +VE+E  H+P   Y  +L+   G++D+  R EA+ WI +V
Sbjct: 61  GGVEEEEDMFPRQSEECVASLVEREQAHMPRADYGERLRGGGGDVDLRVRSEAIGWIWEV 120

Query: 165 SAHFSFGPLCTYLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKMEETEVPLSLDL 224
             +++F  +  YLAVNYLDRFLS Y+LP+G+ W  QLL+VAC+S+AAKMEET VP  LDL
Sbjct: 121 YTYYNFSSVTAYLAVNYLDRFLSQYELPEGRDWMTQLLSVACLSIAAKMEETVVPQCLDL 180

Query: 225 QVGGSKFVFEARTIERMELLVLTTLGWRMQAVTPFSFIDHYLRKIHDDDLSIKMSITRSI 283
           Q+G  +F+FE  TI RMELLVLT L WRMQAVTPFS+ID++LRK++  + + +  + RS 
Sbjct: 181 QIGEPRFLFEVETIHRMELLVLTNLNWRMQAVTPFSYIDYFLRKLNSGNAAPRSWLLRSS 240

[Close]

BLAST of HG10004488 vs. ExPASy Swiss-Prot
Match: Q69QB8 (Cyclin-D3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD3-1 PE=2 SV=2)

HSP 1 Score: 201.1 bits (510), Expect = 1.8e-50
Identity = 118/239 (49.37%), Postives = 150/239 (62.76%), Query Frame = 0


Query: 45  MAPSFDLAVSNLLCAEEN-CIFDNNDDDDETVVEEFVMAPYYLRTRRNRNPHRGGGGGGD 104
           MAPSFD A S LLCAE+N  I D  ++ +E      V A                G    
Sbjct: 1   MAPSFDFAASILLCAEDNTAILDLGEESEEISWVVGVDASL--------------GDLSM 60

Query: 105 GFPFMSDECLIEMV-EKETHHLPVDGYLVK--LQNGELD-VGARKEAVDWIEKVSAHFSF 164
            FP  SD+C+  ++  +E  H+P++GYL +  LQ   LD V  R +A+DWI KV   + F
Sbjct: 61  DFPLQSDDCIEALLGREEQQHIPMEGYLQRLLLQPDGLDLVAVRSDAIDWIWKVHELYKF 120

Query: 165 GPLCTYLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKMEETEVPLSLDLQVGGSK 224
           GPL   L+VNYLDRFLS +DLP+ +A   QLLAVA +SLAAKMEET VP  LDLQV  +K
Sbjct: 121 GPLTAVLSVNYLDRFLSVFDLPQEEACMTQLLAVASLSLAAKMEETVVPHPLDLQVCDAK 180

Query: 225 FVFEARTIERMELLVLTTLGWRMQAVTPFSFIDHYLRKIHDDDLSIKMSITRSIHLLLN 279
           +VFE RTI+RMEL VL  L WRMQAVT  SFID+YL K +DDD     +++RS+ L+L+
Sbjct: 181 YVFETRTIKRMELAVLNALKWRMQAVTACSFIDYYLHKFNDDDTPSTSALSRSVDLILS 225

[Close]

BLAST of HG10004488 vs. ExPASy Swiss-Prot
Match: Q0WQN9 (Cyclin-D4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCD4-2 PE=1 SV=2)

HSP 1 Score: 200.3 bits (508), Expect = 3.0e-50
Identity = 97/180 (53.89%), Postives = 128/180 (71.11%), Query Frame = 0


Query: 104 GFPFMSDECLIEMVEKETHHLPVDGYLVKLQNGELDVGARKEAVDWIEKVSAHFSFGPLC 163
           GFP  S+E + EM+EKE  H P D YL +L+NG+LD   R +A+ WI K      FGPLC
Sbjct: 30  GFPLESEEIVREMIEKERQHSPRDDYLKRLRNGDLDFNVRIQALGWIWKACEELQFGPLC 89

Query: 164 TYLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKMEETEVPLSLDLQVGGSKFVFE 223
             LA+NYLDRFLS +DLP GKAWT+QLLAVAC+SLAAK+EET VP  + LQVG   FVFE
Sbjct: 90  ICLAMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPMFVFE 149

Query: 224 ARTIERMELLVLTTLGWRMQAVTPFSFIDHYLRKIHD-DDLSIKMSITRSIHLLLNIIQG 283
           A++++RMELLVL  L WR++AVTP S++ ++L KI+  D       +TRS+ ++ +  +G
Sbjct: 150 AKSVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYDQEPHSRLVTRSLQVIASTTKG 209

[Close]

BLAST of HG10004488 vs. ExPASy Swiss-Prot
Match: P42752 (Cyclin-D2-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD2-1 PE=1 SV=3)

HSP 1 Score: 198.4 bits (503), Expect = 1.1e-49
Identity = 105/210 (50.00%), Postives = 141/210 (67.14%), Query Frame = 0


Query: 55  NLLCAE--ENCIFDNNDDDDETVVEEFVMAPYYLRTRRNRNPHRGGGGG----GDGFPFM 114
           NL C E  E+ I D NDDDD      F     Y      ++ + GG G     G     +
Sbjct: 4   NLACGETSESWIID-NDDDDINYGGGFTNEIDYNHQLFAKDDNFGGNGSIPMMGSSSSSL 63

Query: 115 SDECLIEMVEKETHHLPVDGYLVKLQNGELDVGARKEAVDWIEKVSAHFSFGPLCTYLAV 174
           S++ + EM+ +E    P   Y+ +L +G+LD+  R +A+DWI KV AH+ FG LC  L++
Sbjct: 64  SEDRIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQALDWILKVCAHYHFGHLCICLSM 123

Query: 175 NYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKMEETEVPLSLDLQVGGSKFVFEARTIE 234
           NYLDRFL++Y+LPK K W  QLLAV+C+SLA+KMEET+VP  +DLQV   KFVFEA+TI+
Sbjct: 124 NYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTIK 183

Query: 235 RMELLVLTTLGWRMQAVTPFSFIDHYLRKI 259
           RMELLV+TTL WR+QA+TPFSFID+++ KI
Sbjct: 184 RMELLVVTTLNWRLQALTPFSFIDYFVDKI 212

[Close]

BLAST of HG10004488 vs. ExPASy TrEMBL
Match: A0A0A0LLB4 (B-like cyclin OS=Cucumis sativus OX=3659 GN=Csa_2G370350 PE=3 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.4e-122
Identity = 223/238 (93.70%), Postives = 225/238 (94.54%), Query Frame = 0


Query: 45  MAPSFDLAVSNLLCAEENCIFDNNDDDDETVVEEFVMAPYYLRTRRNRNPHRGGGGGGDG 104
           MAPSFDLAVS+LLCAEENCIFDNND DDETVVEEFVMAPYYLRT RNRN  R  GGGGDG
Sbjct: 1   MAPSFDLAVSSLLCAEENCIFDNNDGDDETVVEEFVMAPYYLRTGRNRNSRR--GGGGDG 60

Query: 105 FPFMSDECLIEMVEKETHHLPVDGYLVKLQNGELDVGARKEAVDWIEKVSAHFSFGPLCT 164
             FMSDECLIEMVEKE  HLPVDGYLVKLQNGELDVGARKEAVDWIEKVSAHFSFGPLCT
Sbjct: 61  LLFMSDECLIEMVEKEAQHLPVDGYLVKLQNGELDVGARKEAVDWIEKVSAHFSFGPLCT 120

Query: 165 YLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKMEETEVPLSLDLQVGGSKFVFEA 224
           YLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAK+EETEVPLSLDLQVGGSKFVFEA
Sbjct: 121 YLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKLEETEVPLSLDLQVGGSKFVFEA 180

Query: 225 RTIERMELLVLTTLGWRMQAVTPFSFIDHYLRKIHDDDLSIKMSITRSIHLLLNIIQG 283
           RTIERMELLVLTTLGWRMQAVTPFSFIDHYL KIHDD LSIKMSI RSIHLLLNIIQG
Sbjct: 181 RTIERMELLVLTTLGWRMQAVTPFSFIDHYLHKIHDDKLSIKMSIARSIHLLLNIIQG 236

[Close]

BLAST of HG10004488 vs. ExPASy TrEMBL
Match: A0A5A7VH95 (B-like cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004460 PE=3 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 3.0e-122
Identity = 221/238 (92.86%), Postives = 224/238 (94.12%), Query Frame = 0


Query: 45  MAPSFDLAVSNLLCAEENCIFDNNDDDDETVVEEFVMAPYYLRTRRNRNPHRGGGGGGDG 104
           MAPSFDLAVSNLLCAEENCIFDNND DDETVVEEFVMAPYYLRT RNRN  R  GGGG+G
Sbjct: 1   MAPSFDLAVSNLLCAEENCIFDNNDGDDETVVEEFVMAPYYLRTGRNRNYRR--GGGGEG 60

Query: 105 FPFMSDECLIEMVEKETHHLPVDGYLVKLQNGELDVGARKEAVDWIEKVSAHFSFGPLCT 164
            PFMSDECLIEMVEKE  HLPVDGYLVKLQNGELDVGARKEAVDWIEKVS HFSFGPLCT
Sbjct: 61  LPFMSDECLIEMVEKEAQHLPVDGYLVKLQNGELDVGARKEAVDWIEKVSVHFSFGPLCT 120

Query: 165 YLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKMEETEVPLSLDLQVGGSKFVFEA 224
           YLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAK+EETEVPLSLDLQVGGSKFVFEA
Sbjct: 121 YLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKLEETEVPLSLDLQVGGSKFVFEA 180

Query: 225 RTIERMELLVLTTLGWRMQAVTPFSFIDHYLRKIHDDDLSIKMSITRSIHLLLNIIQG 283
           RTIERMELLVLTTLGWRMQAVTPFSFIDHYL +IHDD LSIKM I RSIHLLLNIIQG
Sbjct: 181 RTIERMELLVLTTLGWRMQAVTPFSFIDHYLHRIHDDQLSIKMLIARSIHLLLNIIQG 236

[Close]

BLAST of HG10004488 vs. ExPASy TrEMBL
Match: A0A1S3BBF1 (B-like cyclin OS=Cucumis melo OX=3656 GN=LOC103488106 PE=3 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 3.0e-122
Identity = 221/238 (92.86%), Postives = 224/238 (94.12%), Query Frame = 0


Query: 45  MAPSFDLAVSNLLCAEENCIFDNNDDDDETVVEEFVMAPYYLRTRRNRNPHRGGGGGGDG 104
           MAPSFDLAVSNLLCAEENCIFDNND DDETVVEEFVMAPYYLRT RNRN  R  GGGG+G
Sbjct: 1   MAPSFDLAVSNLLCAEENCIFDNNDGDDETVVEEFVMAPYYLRTGRNRNYRR--GGGGEG 60

Query: 105 FPFMSDECLIEMVEKETHHLPVDGYLVKLQNGELDVGARKEAVDWIEKVSAHFSFGPLCT 164
            PFMSDECLIEMVEKE  HLPVDGYLVKLQNGELDVGARKEAVDWIEKVS HFSFGPLCT
Sbjct: 61  LPFMSDECLIEMVEKEAQHLPVDGYLVKLQNGELDVGARKEAVDWIEKVSVHFSFGPLCT 120

Query: 165 YLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKMEETEVPLSLDLQVGGSKFVFEA 224
           YLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAK+EETEVPLSLDLQVGGSKFVFEA
Sbjct: 121 YLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKLEETEVPLSLDLQVGGSKFVFEA 180

Query: 225 RTIERMELLVLTTLGWRMQAVTPFSFIDHYLRKIHDDDLSIKMSITRSIHLLLNIIQG 283
           RTIERMELLVLTTLGWRMQAVTPFSFIDHYL +IHDD LSIKM I RSIHLLLNIIQG
Sbjct: 181 RTIERMELLVLTTLGWRMQAVTPFSFIDHYLHRIHDDQLSIKMLIARSIHLLLNIIQG 236

[Close]

BLAST of HG10004488 vs. ExPASy TrEMBL
Match: A0A6J1BSP6 (B-like cyclin OS=Momordica charantia OX=3673 GN=LOC111005188 PE=3 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 2.0e-110
Identity = 201/243 (82.72%), Postives = 219/243 (90.12%), Query Frame = 0


Query: 45  MAPSFDLAVSNLLCAEENCIFDNNDDDDETVVEEFVMAPYYLRT-----RRNRNPHRGGG 104
           MAP+FDL V +LLCAE+NCIFDNNDDDDET+ EEFV+ PYYLRT     RRNR P  GG 
Sbjct: 1   MAPNFDLGVGSLLCAEDNCIFDNNDDDDETLEEEFVLPPYYLRTNGTRSRRNRTP-CGGC 60

Query: 105 GGGDGFPFMSDECLIEMVEKETHHLPVDGYLVKLQNGELDVGARKEAVDWIEKVSAHFSF 164
           G G+ FPF+SDECL  MVEKETHH+PVDGYL KLQNGELDVGAR++AVDWI KVSAHFSF
Sbjct: 61  GDGERFPFVSDECLTGMVEKETHHVPVDGYLSKLQNGELDVGARRDAVDWIGKVSAHFSF 120

Query: 165 GPLCTYLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKMEETEVPLSLDLQVGGSK 224
           GPL TYLAVNYLDRFLSAYDLPKGKAWTMQLLAVACM+LAAK+EETEVPLSLDLQVGGSK
Sbjct: 121 GPLSTYLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMALAAKLEETEVPLSLDLQVGGSK 180

Query: 225 FVFEARTIERMELLVLTTLGWRMQAVTPFSFIDHYLRKIHDDDLSIKMSITRSIHLLLNI 283
           FVFEARTIERMELLVLTTLGWRMQAVTPFSFIDH LRKI DD++++K S+ RSIHL+LNI
Sbjct: 181 FVFEARTIERMELLVLTTLGWRMQAVTPFSFIDHCLRKIQDDEIAVKTSLGRSIHLVLNI 240

[Close]

BLAST of HG10004488 vs. ExPASy TrEMBL
Match: A0A6J1KJV9 (B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111495927 PE=3 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 4.0e-106
Identity = 196/238 (82.35%), Postives = 211/238 (88.66%), Query Frame = 0


Query: 45  MAPSFDLAVSNLLCAEENCIFDNNDDDDETVVEEFVMAPYYLRTRRNRNPHRGGGGGGDG 104
           MAPSFDLAV+NLLCAEENCIFD+NDDD      E ++APY L +   ++   GGG GGDG
Sbjct: 1   MAPSFDLAVTNLLCAEENCIFDDNDDD------ECLVAPYVLTSNGFQSWRHGGGHGGDG 60

Query: 105 FPFMSDECLIEMVEKETHHLPVDGYLVKLQNGELDVGARKEAVDWIEKVSAHFSFGPLCT 164
            PF SDECLIEMVEKETHHLPVDGYL+KLQNGELDVGARK+AVDWIE+VSA F+FGPLCT
Sbjct: 61  LPFTSDECLIEMVEKETHHLPVDGYLMKLQNGELDVGARKDAVDWIEQVSARFNFGPLCT 120

Query: 165 YLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKMEETEVPLSLDLQVGGSKFVFEA 224
           YLAVNY+DRFLSAY LPKGKAWTMQLLAVAC+SLAAK+EETEVP+SLDLQVGGSKFVFEA
Sbjct: 121 YLAVNYMDRFLSAYTLPKGKAWTMQLLAVACLSLAAKLEETEVPISLDLQVGGSKFVFEA 180

Query: 225 RTIERMELLVLTTLGWRMQAVTPFSFIDHYLRKIHDDDLSIKMSITRSIHLLLNIIQG 283
           RTIERMELLVLTTLGWRMQAVTPFSFIDHYL KIH DD   K SI RSIHLLLNIIQG
Sbjct: 181 RTIERMELLVLTTLGWRMQAVTPFSFIDHYLCKIHHDD---KTSIARSIHLLLNIIQG 229

[Close]

BLAST of HG10004488 vs. TAIR 10
Match: AT5G10440.1 (cyclin d4;2 )

HSP 1 Score: 200.3 bits (508), Expect = 2.1e-51
Identity = 97/180 (53.89%), Postives = 128/180 (71.11%), Query Frame = 0


Query: 104 GFPFMSDECLIEMVEKETHHLPVDGYLVKLQNGELDVGARKEAVDWIEKVSAHFSFGPLC 163
           GFP  S+E + EM+EKE  H P D YL +L+NG+LD   R +A+ WI K      FGPLC
Sbjct: 30  GFPLESEEIVREMIEKERQHSPRDDYLKRLRNGDLDFNVRIQALGWIWKACEELQFGPLC 89

Query: 164 TYLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKMEETEVPLSLDLQVGGSKFVFE 223
             LA+NYLDRFLS +DLP GKAWT+QLLAVAC+SLAAK+EET VP  + LQVG   FVFE
Sbjct: 90  ICLAMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPMFVFE 149

Query: 224 ARTIERMELLVLTTLGWRMQAVTPFSFIDHYLRKIHD-DDLSIKMSITRSIHLLLNIIQG 283
           A++++RMELLVL  L WR++AVTP S++ ++L KI+  D       +TRS+ ++ +  +G
Sbjct: 150 AKSVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYDQEPHSRLVTRSLQVIASTTKG 209

[Close]

BLAST of HG10004488 vs. TAIR 10
Match: AT2G22490.1 (Cyclin D2;1 )

HSP 1 Score: 198.4 bits (503), Expect = 8.1e-51
Identity = 105/210 (50.00%), Postives = 141/210 (67.14%), Query Frame = 0


Query: 55  NLLCAE--ENCIFDNNDDDDETVVEEFVMAPYYLRTRRNRNPHRGGGGG----GDGFPFM 114
           NL C E  E+ I D NDDDD      F     Y      ++ + GG G     G     +
Sbjct: 4   NLACGETSESWIID-NDDDDINYGGGFTNEIDYNHQLFAKDDNFGGNGSIPMMGSSSSSL 63

Query: 115 SDECLIEMVEKETHHLPVDGYLVKLQNGELDVGARKEAVDWIEKVSAHFSFGPLCTYLAV 174
           S++ + EM+ +E    P   Y+ +L +G+LD+  R +A+DWI KV AH+ FG LC  L++
Sbjct: 64  SEDRIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQALDWILKVCAHYHFGHLCICLSM 123

Query: 175 NYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKMEETEVPLSLDLQVGGSKFVFEARTIE 234
           NYLDRFL++Y+LPK K W  QLLAV+C+SLA+KMEET+VP  +DLQV   KFVFEA+TI+
Sbjct: 124 NYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTIK 183

Query: 235 RMELLVLTTLGWRMQAVTPFSFIDHYLRKI 259
           RMELLV+TTL WR+QA+TPFSFID+++ KI
Sbjct: 184 RMELLVVTTLNWRLQALTPFSFIDYFVDKI 212

[Close]

BLAST of HG10004488 vs. TAIR 10
Match: AT2G22490.2 (Cyclin D2;1 )

HSP 1 Score: 198.4 bits (503), Expect = 8.1e-51
Identity = 105/210 (50.00%), Postives = 141/210 (67.14%), Query Frame = 0


Query: 55  NLLCAE--ENCIFDNNDDDDETVVEEFVMAPYYLRTRRNRNPHRGGGGG----GDGFPFM 114
           NL C E  E+ I D NDDDD      F     Y      ++ + GG G     G     +
Sbjct: 4   NLACGETSESWIID-NDDDDINYGGGFTNEIDYNHQLFAKDDNFGGNGSIPMMGSSSSSL 63

Query: 115 SDECLIEMVEKETHHLPVDGYLVKLQNGELDVGARKEAVDWIEKVSAHFSFGPLCTYLAV 174
           S++ + EM+ +E    P   Y+ +L +G+LD+  R +A+DWI KV AH+ FG LC  L++
Sbjct: 64  SEDRIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQALDWILKVCAHYHFGHLCICLSM 123

Query: 175 NYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKMEETEVPLSLDLQVGGSKFVFEARTIE 234
           NYLDRFL++Y+LPK K W  QLLAV+C+SLA+KMEET+VP  +DLQV   KFVFEA+TI+
Sbjct: 124 NYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTIK 183

Query: 235 RMELLVLTTLGWRMQAVTPFSFIDHYLRKI 259
           RMELLV+TTL WR+QA+TPFSFID+++ KI
Sbjct: 184 RMELLVVTTLNWRLQALTPFSFIDYFVDKI 212

[Close]

BLAST of HG10004488 vs. TAIR 10
Match: AT5G65420.1 (CYCLIN D4;1 )

HSP 1 Score: 194.5 bits (493), Expect = 1.2e-49
Identity = 94/176 (53.41%), Postives = 132/176 (75.00%), Query Frame = 0


Query: 109 SDECLIEMVEKETHHLPVDGYLVKLQNGELDVG-ARKEAVDWIEKVSAHFSFGPLCTYLA 168
           S+E ++EMVEKE  HLP D Y+ +L++G+LD+   R++A++WI K      FGPLC  LA
Sbjct: 43  SEEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEVHQFGPLCFCLA 102

Query: 169 VNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKMEETEVPLSLDLQVGGSKFVFEARTI 228
           +NYLDRFLS +DLP GK W +QLLAVAC+SLAAK+EETEVP+ +DLQVG  +FVFEA+++
Sbjct: 103 MNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSV 162

Query: 229 ERMELLVLTTLGWRMQAVTPFSFIDHYLRKIHD-DDLSIKMSITRSIHLLLNIIQG 283
           +RMELLVL  L WR++A+TP S+I ++LRK+   D       I+RS+ ++ +  +G
Sbjct: 163 QRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKG 218

[Close]

BLAST of HG10004488 vs. TAIR 10
Match: AT5G65420.2 (CYCLIN D4;1 )

HSP 1 Score: 194.5 bits (493), Expect = 1.2e-49
Identity = 97/184 (52.72%), Postives = 136/184 (73.91%), Query Frame = 0


Query: 109 SDECLIEMVEKETHHLPVDGYLVKLQNGELDVG-ARKEAVDWIEKVSAHFSFGPLCTYLA 168
           S+E ++EMVEKE  HLP D Y+ +L++G+LD+   R++A++WI K      FGPLC  LA
Sbjct: 43  SEEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEVHQFGPLCFCLA 102

Query: 169 VNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKMEETEVPLSLDLQVGGSKFVFEARTI 228
           +NYLDRFLS +DLP GK W +QLLAVAC+SLAAK+EETEVP+ +DLQVG  +FVFEA+++
Sbjct: 103 MNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSV 162

Query: 229 ERMELLVLTTLGWRMQAVTPFSFIDHYLRKIHD-DDLSIKMSITRSIHLLLNIIQG---P 288
           +RMELLVL  L WR++A+TP S+I ++LRK+   D       I+RS+ ++ +  +G    
Sbjct: 163 QRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKGEKKS 222

The following BLAST results are available for this feature:

BLAST of HG10004488 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886634.1	1.0e-124	94.12	cyclin-D4-1-like [Benincasa hispida]	[more]
XP_004152610.1	2.8e-122	93.70	cyclin-D4-1 [Cucumis sativus] >KGN62735.1 hypothetical protein Csa_021782 [Cucum...	[more]
XP_008444892.1	6.3e-122	92.86	PREDICTED: cyclin-D4-1-like [Cucumis melo] >KAA0065111.1 cyclin-D4-1-like [Cucum...	[more]
XP_022132304.1	4.2e-110	82.72	cyclin-D4-1-like [Momordica charantia]	[more]
KAG6585354.1	2.2e-106	82.77	Cyclin-D4-2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of HG10004488 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6YXH8	5.3e-55	48.98	Cyclin-D4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-1 PE=2 SV=2	[more]
Q4KYM5	2.2e-53	46.59	Cyclin-D4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-2 PE=2 SV=2	[more]
Q69QB8	1.8e-50	49.37	Cyclin-D3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD3-1 PE=2 SV=2	[more]
Q0WQN9	3.0e-50	53.89	Cyclin-D4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCD4-2 PE=1 SV=2	[more]
P42752	1.1e-49	50.00	Cyclin-D2-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD2-1 PE=1 SV=3	[more]

BLAST of HG10004488 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLB4	1.4e-122	93.70	B-like cyclin OS=Cucumis sativus OX=3659 GN=Csa_2G370350 PE=3 SV=1	[more]
A0A5A7VH95	3.0e-122	92.86	B-like cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004460 ...	[more]
A0A1S3BBF1	3.0e-122	92.86	B-like cyclin OS=Cucumis melo OX=3656 GN=LOC103488106 PE=3 SV=1	[more]
A0A6J1BSP6	2.0e-110	82.72	B-like cyclin OS=Momordica charantia OX=3673 GN=LOC111005188 PE=3 SV=1	[more]
A0A6J1KJV9	4.0e-106	82.35	B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111495927 PE=3 SV=1	[more]

BLAST of HG10004488 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10440.1	2.1e-51	53.89	cyclin d4;2	[more]
AT2G22490.1	8.1e-51	50.00	Cyclin D2;1	[more]
AT2G22490.2	8.1e-51	50.00	Cyclin D2;1	[more]
AT5G65420.1	1.2e-49	53.41	CYCLIN D4;1	[more]
AT5G65420.2	1.2e-49	52.72	CYCLIN D4;1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013763	Cyclin-like	SMART	SM00385	cyclin_7	coord: 148..236 e-value: 2.3E-18 score: 77.0
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 143..235 e-value: 3.3309E-17 score: 73.0416
IPR006671	Cyclin, N-terminal	PFAM	PF00134	Cyclin_N	coord: 116..242 e-value: 1.1E-28 score: 99.5
None	No IPR available	GENE3D	1.10.472.10		coord: 126..243 e-value: 1.3E-40 score: 141.1
None	No IPR available	GENE3D	1.10.472.10		coord: 115..261 e-value: 1.3E-40 score: 141.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	PANTHER	PTHR10177:SF446	CARBOXY-TERMINAL DOMAIN CYCLIN	coord: 45..277
IPR039361	Cyclin	PANTHER	PTHR10177	CYCLINS	coord: 45..277
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 106..242

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10004488.1	HG10004488.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007049	cell cycle
biological_process	GO:0051301	cell division