HG10004470 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10004470
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RING-H2 finger protein ATL11-like
Location	Chr08: 17385585 .. 17386694 (+)
RNA-Seq Expression	HG10004470
Synteny	HG10004470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCTTTCCATCCTTTTCCTTCCTCAATCATGTCCTCATCCATTTCATTCTCCTCTCCCAAATCTCCCTCGCCGCCGCTCAATCCGGAGCACCCCCAGATATGTACCCTTTCAAACAGACCATCAGCAAACGAATGGCTGTCATTTTGATTGTTCTCGTTTGCTTCTTCATCGTTCTCGCCGTTCTCTCCGTCTACACCCGTCAGTGCACTGACCAACGCTTCGGCGGTCGTCTCCTCCTCTCCACTGCCCAAGATGGAACCAACGCCCGATCCAGAAGAGCGGCGCGTGGCCTCGACGCGGCTGTTATAGCTACTTTCCCAACCTTTGTGTACTCCAACGTCAAGGATCTCAAAATTGGGAAAGGCTCGTTGGAGTGCGCCATTTGTTTATCCGAATTCGAAGATGATGATACGCTGCGTTTGTTGCCGAAATGCAGCCACGTCTTCCACTCCGATTGCATCGACGCTTGGTTGGTCTCTCACTCTACTTGCCCTGTTTGCCGCGCCAGCCTTGTCCCTAAACCCGGGGATATATCCTTCGCTGCTCTGCTCAATTCCGATTCGGGAAATAACGGGGATGGACACGATGAAGGAAATCGAGGGACTGGATCGGAAACTACTCAGGTTGTTGTTCGAATTCCGGAGGGGAATCAGGGTCAGGATGTGAATTTGATAACCCCAAATCAGGGATTGAATCAGAACGGTCCAATTCGGTCGCGATCGTCGGGATGGAGATTAAGCGGATTGTTTCCTCGGTCCCACTCGACGGGTCATTCTCTGGTTCAACGGGGAGAGGATTACGAGAGATATACGTTGAGATTGCCGGAGGAGGTGAGAAGTGAGCTGATGAATTCGAATTTGAACCGGGCAAGGAGCTGCGTGGCGTTTCCGAGGGTGCAGAGTTCGAGACAGGGGTACCGGAGTGAGTTGGGGAAGATTGGGTTTGTGGGAAATCGGAGCCGCAGTGGGCGGTCGGAGTGGCGGACATTGTTACCGACGACGCCGTTGTTCAGAAGGGAGGGTTCGAGAAAGGATGTGAATGGAGATGGCGGTGGACGGCCGTTCGCACGCTTGCGGCCTGATGGGGATGGTCAAAGTCAACAATAA

mRNA sequence

ATGACCTTTCCATCCTTTTCCTTCCTCAATCATGTCCTCATCCATTTCATTCTCCTCTCCCAAATCTCCCTCGCCGCCGCTCAATCCGGAGCACCCCCAGATATGTACCCTTTCAAACAGACCATCAGCAAACGAATGGCTGTCATTTTGATTGTTCTCGTTTGCTTCTTCATCGTTCTCGCCGTTCTCTCCGTCTACACCCGTCAGTGCACTGACCAACGCTTCGGCGGTCGTCTCCTCCTCTCCACTGCCCAAGATGGAACCAACGCCCGATCCAGAAGAGCGGCGCGTGGCCTCGACGCGGCTGTTATAGCTACTTTCCCAACCTTTGTGTACTCCAACGTCAAGGATCTCAAAATTGGGAAAGGCTCGTTGGAGTGCGCCATTTGTTTATCCGAATTCGAAGATGATGATACGCTGCGTTTGTTGCCGAAATGCAGCCACGTCTTCCACTCCGATTGCATCGACGCTTGGTTGGTCTCTCACTCTACTTGCCCTGTTTGCCGCGCCAGCCTTGTCCCTAAACCCGGGGATATATCCTTCGCTGCTCTGCTCAATTCCGATTCGGGAAATAACGGGGATGGACACGATGAAGGAAATCGAGGGACTGGATCGGAAACTACTCAGGTTGTTGTTCGAATTCCGGAGGGGAATCAGGGTCAGGATGTGAATTTGATAACCCCAAATCAGGGATTGAATCAGAACGGTCCAATTCGGTCGCGATCGTCGGGATGGAGATTAAGCGGATTGTTTCCTCGGTCCCACTCGACGGGTCATTCTCTGGTTCAACGGGGAGAGGATTACGAGAGATATACGTTGAGATTGCCGGAGGAGGTGAGAAGTGAGCTGATGAATTCGAATTTGAACCGGGCAAGGAGCTGCGTGGCGTTTCCGAGGGTGCAGAGTTCGAGACAGGGGTACCGGAGTGAGTTGGGGAAGATTGGGTTTGTGGGAAATCGGAGCCGCAGTGGGCGGTCGGAGTGGCGGACATTGTTACCGACGACGCCGTTGTTCAGAAGGGAGGGTTCGAGAAAGGATGTGAATGGAGATGGCGGTGGACGGCCGTTCGCACGCTTGCGGCCTGATGGGGATGGTCAAAGTCAACAATAA

Coding sequence (CDS)

ATGACCTTTCCATCCTTTTCCTTCCTCAATCATGTCCTCATCCATTTCATTCTCCTCTCCCAAATCTCCCTCGCCGCCGCTCAATCCGGAGCACCCCCAGATATGTACCCTTTCAAACAGACCATCAGCAAACGAATGGCTGTCATTTTGATTGTTCTCGTTTGCTTCTTCATCGTTCTCGCCGTTCTCTCCGTCTACACCCGTCAGTGCACTGACCAACGCTTCGGCGGTCGTCTCCTCCTCTCCACTGCCCAAGATGGAACCAACGCCCGATCCAGAAGAGCGGCGCGTGGCCTCGACGCGGCTGTTATAGCTACTTTCCCAACCTTTGTGTACTCCAACGTCAAGGATCTCAAAATTGGGAAAGGCTCGTTGGAGTGCGCCATTTGTTTATCCGAATTCGAAGATGATGATACGCTGCGTTTGTTGCCGAAATGCAGCCACGTCTTCCACTCCGATTGCATCGACGCTTGGTTGGTCTCTCACTCTACTTGCCCTGTTTGCCGCGCCAGCCTTGTCCCTAAACCCGGGGATATATCCTTCGCTGCTCTGCTCAATTCCGATTCGGGAAATAACGGGGATGGACACGATGAAGGAAATCGAGGGACTGGATCGGAAACTACTCAGGTTGTTGTTCGAATTCCGGAGGGGAATCAGGGTCAGGATGTGAATTTGATAACCCCAAATCAGGGATTGAATCAGAACGGTCCAATTCGGTCGCGATCGTCGGGATGGAGATTAAGCGGATTGTTTCCTCGGTCCCACTCGACGGGTCATTCTCTGGTTCAACGGGGAGAGGATTACGAGAGATATACGTTGAGATTGCCGGAGGAGGTGAGAAGTGAGCTGATGAATTCGAATTTGAACCGGGCAAGGAGCTGCGTGGCGTTTCCGAGGGTGCAGAGTTCGAGACAGGGGTACCGGAGTGAGTTGGGGAAGATTGGGTTTGTGGGAAATCGGAGCCGCAGTGGGCGGTCGGAGTGGCGGACATTGTTACCGACGACGCCGTTGTTCAGAAGGGAGGGTTCGAGAAAGGATGTGAATGGAGATGGCGGTGGACGGCCGTTCGCACGCTTGCGGCCTGATGGGGATGGTCAAAGTCAACAATAA

Protein sequence

MTFPSFSFLNHVLIHFILLSQISLAAAQSGAPPDMYPFKQTISKRMAVILIVLVCFFIVLAVLSVYTRQCTDQRFGGRLLLSTAQDGTNARSRRAARGLDAAVIATFPTFVYSNVKDLKIGKGSLECAICLSEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDISFAALLNSDSGNNGDGHDEGNRGTGSETTQVVVRIPEGNQGQDVNLITPNQGLNQNGPIRSRSSGWRLSGLFPRSHSTGHSLVQRGEDYERYTLRLPEEVRSELMNSNLNRARSCVAFPRVQSSRQGYRSELGKIGFVGNRSRSGRSEWRTLLPTTPLFRREGSRKDVNGDGGGRPFARLRPDGDGQSQQ

Homology

[Close]

BLAST of HG10004470 vs. NCBI nr
Match: XP_038884270.1 (RING-H2 finger protein ATL11-like [Benincasa hispida])

HSP 1 Score: 690.3 bits (1780), Expect = 9.3e-195
Identity = 351/370 (94.86%), Postives = 358/370 (96.76%), Query Frame = 0


Query: 1   MTFPSFSFLNHVLIHFILLSQISLAAAQSGAPPDMYPFKQTISKRMAVILIVLVCFFIVL 60
           MT PSFSFLNHVLIHFILLSQISL+AAQSGAPPDMYPFKQTISKRMAV+LIVLVCFFIVL
Sbjct: 1   MTSPSFSFLNHVLIHFILLSQISLSAAQSGAPPDMYPFKQTISKRMAVVLIVLVCFFIVL 60

Query: 61  AVLSVYTRQCTDQRFGGRLLLSTAQDGTNARSRRAARGLDAAVIATFPTFVYSNVKDLKI 120
           AVLSVYTRQCTDQRFGGRLLLST QDGTNARSRRAARGLDAAVIATFPTFVYSNVKDLKI
Sbjct: 61  AVLSVYTRQCTDQRFGGRLLLSTTQDGTNARSRRAARGLDAAVIATFPTFVYSNVKDLKI 120

Query: 121 GKGSLECAICLSEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDIS 180
           GKGSLECAICLSEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDIS
Sbjct: 121 GKGSLECAICLSEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDIS 180

Query: 181 FAALLNSDSGNNGDGHDEGNRGTGSETTQVVVRIPEGNQGQDVNLITPNQGLNQNGPIRS 240
           FAALLNSDS  +G G DEGNR TGSE +QVVVRIPEGNQGQDV+LITPNQGLN+NGPIRS
Sbjct: 181 FAALLNSDSVIDGVGRDEGNRVTGSEISQVVVRIPEGNQGQDVSLITPNQGLNRNGPIRS 240

Query: 241 RSSGWRLSGLFPRSHSTGHSLVQRGEDYERYTLRLPEEVRSELMNSNLNRARSCVAFPRV 300
           RSSGWRLSGLFPRSHSTGHSL QRGEDYERYTLRLPEEVRSEL+NSNLNRARSCVAFPRV
Sbjct: 241 RSSGWRLSGLFPRSHSTGHSLTQRGEDYERYTLRLPEEVRSELLNSNLNRARSCVAFPRV 300

Query: 301 QSSRQGYRSELGKIGFVGNRSRSGRSEWRTLLP-TTPLFRREGSRKDVNGDGGGRPFARL 360
           QSSRQGYRSELGK GFVGNRSRSGRSEWRTLLP  TPLFRREGSRKDVNGDGGGRPFARL
Sbjct: 301 QSSRQGYRSELGKTGFVGNRSRSGRSEWRTLLPAATPLFRREGSRKDVNGDGGGRPFARL 360

Query: 361 RPDGDGQSQQ 370
           RPDGDGQSQQ
Sbjct: 361 RPDGDGQSQQ 370

[Close]

BLAST of HG10004470 vs. NCBI nr
Match: XP_008444873.1 (PREDICTED: RING-H2 finger protein ATL11-like [Cucumis melo] >KAA0065125.1 RING-H2 finger protein ATL11-like [Cucumis melo var. makuwa])

HSP 1 Score: 645.6 bits (1664), Expect = 2.6e-181
Identity = 327/369 (88.62%), Postives = 342/369 (92.68%), Query Frame = 0


Query: 1   MTFPSFSFLNHVLIHFILLSQISLAAAQSGAPPDMYPFKQTISKRMAVILIVLVCFFIVL 60
           MT  S  FLNHV ++FILLS +SLAAAQSGAPPDMYPFKQTISKRMAV+LIVLVCFFIV+
Sbjct: 1   MTSQSLFFLNHVFVYFILLSHVSLAAAQSGAPPDMYPFKQTISKRMAVVLIVLVCFFIVV 60

Query: 61  AVLSVYTRQCTDQRFGGRLLLSTAQDGTNARSRRAARGLDAAVIATFPTFVYSNVKDLKI 120
           AVLSVYTRQCT+QRFGGRLLL T  DG NARSRRAARGLDAAVIATFPTFVYSNVKDLKI
Sbjct: 61  AVLSVYTRQCTEQRFGGRLLLPTHLDGANARSRRAARGLDAAVIATFPTFVYSNVKDLKI 120

Query: 121 GKGSLECAICLSEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDIS 180
           GKGSLECAICLSEF DDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDIS
Sbjct: 121 GKGSLECAICLSEFGDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDIS 180

Query: 181 FAALLNSDSGNNGDGHDEGNRGTGSETTQVVVRIPEGNQGQDVNLITPNQGLNQNGPIRS 240
           FAALLNSDSG +G+G DEGNRGTG+E  QV+VRIPE NQGQDVNLITPNQGLNQ+  IRS
Sbjct: 181 FAALLNSDSGIDGNGRDEGNRGTGAENNQVIVRIPEENQGQDVNLITPNQGLNQSRSIRS 240

Query: 241 RSSGWRLSGLFPRSHSTGHSLVQRGEDYERYTLRLPEEVRSELMNSNLNRARSCVAFPRV 300
           RSSGWRLSGLFPRSHSTGHSLVQRG DYERYTLRLPEEVRSEL+NSNLNRARSCVAF R+
Sbjct: 241 RSSGWRLSGLFPRSHSTGHSLVQRGVDYERYTLRLPEEVRSELLNSNLNRARSCVAFQRM 300

Query: 301 QSSRQGYRSELGKIGFVGNRSRSGRSEWRTLLPTTPLFRREGSRKDVNGDGGGRPFARLR 360
           QSSRQGYR+ELGK G VGNRSRSGRSEWRTLLP  PLF+REGSRKDVNGD GGRPFARLR
Sbjct: 301 QSSRQGYRNELGKNGLVGNRSRSGRSEWRTLLPGAPLFKREGSRKDVNGDDGGRPFARLR 360

Query: 361 PDGDGQSQQ 370
            D DGQSQQ
Sbjct: 361 ADCDGQSQQ 369

[Close]

BLAST of HG10004470 vs. NCBI nr
Match: XP_004152750.1 (RING-H2 finger protein ATL11 [Cucumis sativus] >KGN62719.1 hypothetical protein Csa_022057 [Cucumis sativus])

HSP 1 Score: 639.8 bits (1649), Expect = 1.4e-179
Identity = 325/369 (88.08%), Postives = 339/369 (91.87%), Query Frame = 0


Query: 1   MTFPSFSFLNHVLIHFILLSQISLAAAQSGAPPDMYPFKQTISKRMAVILIVLVCFFIVL 60
           MT  S  F+NHV I+FILLS +SL AAQSGAPPDMYPFKQTISKRMAV+LIVLVCFFIV+
Sbjct: 1   MTSQSLFFVNHVFIYFILLSHVSLTAAQSGAPPDMYPFKQTISKRMAVVLIVLVCFFIVV 60

Query: 61  AVLSVYTRQCTDQRFGGRLLLSTAQDGTNARSRRAARGLDAAVIATFPTFVYSNVKDLKI 120
           AVLSVYTRQCT+QRFGGRLLL    DGTNARSRRAARGLDAAVIATFPTFVYSNVKDLKI
Sbjct: 61  AVLSVYTRQCTEQRFGGRLLLPAPLDGTNARSRRAARGLDAAVIATFPTFVYSNVKDLKI 120

Query: 121 GKGSLECAICLSEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDIS 180
           GKGSLECAICLSEF DDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDIS
Sbjct: 121 GKGSLECAICLSEFGDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDIS 180

Query: 181 FAALLNSDSGNNGDGHDEGNRGTGSETTQVVVRIPEGNQGQDVNLITPNQGLNQNGPIRS 240
           FAALLNSDSG +G+G DEGNRGTGSE  QVVV+IPE NQGQDVNLITPNQGLNQ+  IRS
Sbjct: 181 FAALLNSDSGIDGNGRDEGNRGTGSENNQVVVQIPEENQGQDVNLITPNQGLNQSRSIRS 240

Query: 241 RSSGWRLSGLFPRSHSTGHSLVQRGEDYERYTLRLPEEVRSELMNSNLNRARSCVAFPRV 300
           RSSGWRLSGLFPRSHSTGHSLVQRG DYERYTLRLPEEVRSEL+NSNLNRARSCVAF R+
Sbjct: 241 RSSGWRLSGLFPRSHSTGHSLVQRGMDYERYTLRLPEEVRSELLNSNLNRARSCVAFQRM 300

Query: 301 QSSRQGYRSELGKIGFVGNRSRSGRSEWRTLLPTTPLFRREGSRKDVNGDGGGRPFARLR 360
           QSSRQGYR+ELGK G VGNRSRSGR EWRTLL   PL +REGSRK VNGD GGRPFARLR
Sbjct: 301 QSSRQGYRNELGKNGSVGNRSRSGRPEWRTLLAAAPLLKREGSRKGVNGDEGGRPFARLR 360

Query: 361 PDGDGQSQQ 370
           PDGDGQSQQ
Sbjct: 361 PDGDGQSQQ 369

[Close]

BLAST of HG10004470 vs. NCBI nr
Match: KAG6598707.1 (RING-H2 finger protein ATL11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 563.1 bits (1450), Expect = 1.7e-156
Identity = 296/366 (80.87%), Postives = 311/366 (84.97%), Query Frame = 0


Query: 13  LIHFILLSQISLAAAQSG-----APPDMYPFKQTISKRMAVILIVLVCFFIVLAVLSVYT 72
           LIH ILLS ISLAAAQSG     +PPDMY FKQTISKRMAV+LIVLVCFFIVLA+LSVYT
Sbjct: 16  LIHSILLSHISLAAAQSGGPTVPSPPDMYSFKQTISKRMAVVLIVLVCFFIVLALLSVYT 75

Query: 73  RQCTDQRFGGRLLLSTAQDGTNARSRRAARGLDAAVIATFPTFVYSNVKDLKIGKGSLEC 132
           RQC DQRF G LLL TA +G N R RRAARGLDAAVIA+FPTFVYSNVK LKIGKG+LEC
Sbjct: 76  RQCNDQRFAGHLLLPTAAEGINGRPRRAARGLDAAVIASFPTFVYSNVKGLKIGKGALEC 135

Query: 133 AICLSEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDISFAALLNS 192
           A+CLSEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDISFAALL+S
Sbjct: 136 AVCLSEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDISFAALLDS 195

Query: 193 DSGNNGDGHDEGNRGTGSETTQVVVRIPEGNQGQDVNLITPNQGLNQNGPIRSRSSGWRL 252
           DS  +G   D+GNR  G E  QV +RIPEGN         PNQGLNQNGPIRSRS+GWRL
Sbjct: 196 DSRIHG---DDGNRVAGLENCQVGIRIPEGN--------PPNQGLNQNGPIRSRSTGWRL 255

Query: 253 SGLFPRSHSTGHSLVQRGEDYERYTLRLPEEVRSELMNSNLNRARSCVAFPRVQSSRQGY 312
           +GLFPRSHSTGHSLVQ G DYER+TLRLP EVRSEL+NSNLNRARSCVA PRVQSSRQGY
Sbjct: 256 TGLFPRSHSTGHSLVQIGADYERFTLRLPTEVRSELLNSNLNRARSCVALPRVQSSRQGY 315

Query: 313 RSELGKIGFVGNRSRSGRSEWRTLLPTTPLFRREGSRKDV----NGDGGGRPFARLRPDG 370
           RSELGK GFVGNRSRSGRSEW T  P TPLFRREGSR D     NGDGGGRPF RLR D 
Sbjct: 316 RSELGKSGFVGNRSRSGRSEWWTFFPATPLFRREGSRNDANVNGNGDGGGRPFVRLRDDT 370

[Close]

BLAST of HG10004470 vs. NCBI nr
Match: KAG7029649.1 (RING-H2 finger protein ATL11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 563.1 bits (1450), Expect = 1.7e-156
Identity = 297/370 (80.27%), Postives = 312/370 (84.32%), Query Frame = 0


Query: 9   LNHVLIHFILLSQISLAAAQSG-----APPDMYPFKQTISKRMAVILIVLVCFFIVLAVL 68
           L   LIH ILLS ISLAAAQSG     +PPDMY FKQTISKRMAV+LIVLVCFFIVLA+L
Sbjct: 12  LTGFLIHSILLSHISLAAAQSGGPTVPSPPDMYSFKQTISKRMAVVLIVLVCFFIVLALL 71

Query: 69  SVYTRQCTDQRFGGRLLLSTAQDGTNARSRRAARGLDAAVIATFPTFVYSNVKDLKIGKG 128
           SVYTRQC DQRF G LLL TA +G N R RRAARGLDAAVIA+FPTFVYSNVK LKIGKG
Sbjct: 72  SVYTRQCNDQRFAGHLLLPTAAEGINGRPRRAARGLDAAVIASFPTFVYSNVKGLKIGKG 131

Query: 129 SLECAICLSEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDISFAA 188
           +LECA+CLSEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDISFAA
Sbjct: 132 ALECAVCLSEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDISFAA 191

Query: 189 LLNSDSGNNGDGHDEGNRGTGSETTQVVVRIPEGNQGQDVNLITPNQGLNQNGPIRSRSS 248
           LL+SDS  +G   D+GNR  G E  QV +RIPEGN         PNQGLNQNGPIRSRS+
Sbjct: 192 LLDSDSRIHG---DDGNRVAGLENCQVGIRIPEGN--------PPNQGLNQNGPIRSRST 251

Query: 249 GWRLSGLFPRSHSTGHSLVQRGEDYERYTLRLPEEVRSELMNSNLNRARSCVAFPRVQSS 308
           GWRL+GLFPRSHSTGHSLVQ G DYER+TLRLP EVRSEL+NSNLNRARSCVA PRVQSS
Sbjct: 252 GWRLTGLFPRSHSTGHSLVQIGADYERFTLRLPTEVRSELLNSNLNRARSCVALPRVQSS 311

Query: 309 RQGYRSELGKIGFVGNRSRSGRSEWRTLLPTTPLFRREGSRKDV----NGDGGGRPFARL 368
           RQGYRSELGK GFVGNRSRSGRSEW T  P TPLFRREGSR D     NGDGGGRPF RL
Sbjct: 312 RQGYRSELGKSGFVGNRSRSGRSEWWTFFPATPLFRREGSRNDANVNGNGDGGGRPFVRL 370

Query: 369 RPDGDGQSQQ 370
           R D DGQSQQ
Sbjct: 372 RDDTDGQSQQ 370

[Close]

BLAST of HG10004470 vs. ExPASy Swiss-Prot
Match: Q84W40 (RING-H2 finger protein ATL11 OS=Arabidopsis thaliana OX=3702 GN=ATL11 PE=2 SV=2)

HSP 1 Score: 214.9 bits (546), Expect = 1.5e-54
Identity = 132/321 (41.12%), Postives = 187/321 (58.26%), Query Frame = 0


Query: 46  MAVILIVLVCFFIVLAVLSVYTRQCTDQRFGGRLLLSTAQDGTN--ARSRRAARGLDAAV 105
           MA+++IVLV  F  L   SVY R+C ++  G  +      D  N  A +R+ ARGLDA++
Sbjct: 63  MAILMIVLVSVFFFLGFFSVYIRRCLERVMG--MDYGNPNDAGNWLATNRQQARGLDASI 122

Query: 106 IATFPTFVYSNVKDLKIGKGSLECAICLSEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHS 165
           I TFPTF YS VK L+IGK +LEC++CL+EFEDD+TLRL+PKC HVFH  CIDAWL SH+
Sbjct: 123 IETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHT 182

Query: 166 TCPVCRASLVPKPGD----ISFAALLNSDSGNNGDGHDEGNRGTGSETTQVVVRIPEGNQ 225
           TCP+CRA L+P PG+    I    L+N   G++ +G  +  R  GS   +++  +     
Sbjct: 183 TCPLCRADLIPVPGESIVSIQIPGLVNDPPGSDPNG--DRIRSLGSPDARLIESV----- 242

Query: 226 GQDVNLITPNQGLNQNGPIRSRSSGWRLSGLFPRSHSTGHSLVQRGEDYERYTLRLPEEV 285
                 +T NQ +    P RS S+GW L+G+F  S  TG    Q  E+ +R+TLRLP+++
Sbjct: 243 -----ALTCNQSM----PRRSMSTGWNLAGMFTNSDRTG----QHSENLDRFTLRLPQDI 302

Query: 286 RSELMNSNLNRARSCVAFPRVQSSRQGYRSELGKIGFVGNR------SRSGRSEWRTLLP 345
            ++L+N NL++    VA P+V SS +GYR+  G +G   N        + GR + R    
Sbjct: 303 HNKLVNPNLSKVH--VALPQVMSSTRGYRT--GSLGSERNYFYYERFDQDGRLDRRPFSI 357

Query: 346 TTPLFRREGSRKDVNGDGGGR 355
           T P      +     G GG +
Sbjct: 363 TPPYRTSSINHMSPGGSGGDK 357

[Close]

BLAST of HG10004470 vs. ExPASy Swiss-Prot
Match: Q8RXX9 (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2)

HSP 1 Score: 204.9 bits (520), Expect = 1.6e-51
Identity = 137/336 (40.77%), Postives = 177/336 (52.68%), Query Frame = 0


Query: 13  LIHFILLSQISLAAAQSGAPPDMYPFKQ-TISKRMAVILIVLVCFFIVLAVLSVYTRQCT 72
           ++  ++LS   LAA+QS   P   P+    +S  MAVI+++L+     +   S+Y R C+
Sbjct: 15  IVFLLILSSADLAASQSQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHCS 74

Query: 73  DQRFGGRLLLSTAQDGTNARSRRAARGLDAAVIATFPTFVYSNVKDLKIGKGSLECAICL 132
                G      A+  + A    AARGLD +V+ TFPTF+YS+VK  K+GKG LECAICL
Sbjct: 75  GVPDAGVSPAGGAR--SRATVNAAARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICL 134

Query: 133 SEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDISFAALLNSDSGN 192
           +EFEDD+TLRLLPKC HVFH  CIDAWL +H TCPVCRA+L  +  +             
Sbjct: 135 NEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAE------------- 194

Query: 193 NGDGHDEGNRGTGSETTQVVVRIPEGNQGQDVNLITPNQGLNQNGPIRSRSSGWRLSGL- 252
            G+  + G      E  QVVV     N    V    P Q       + S     RL G+ 
Sbjct: 195 -GESVEPGGTEPDLELQQVVV-----NPEPVVTAPVPEQ------LVTSEVDSRRLPGVP 254

Query: 253 -------FPRSHSTGHSLVQRGEDYERYTLRLPEEVRSELMNS-NLNRARSCVAFPRVQS 312
                  F RSH+TGHS+VQ GE  ER+TLRLPE+VR  +M    LNR  S +  PR  S
Sbjct: 255 VDLKRVKFSRSHTTGHSVVQPGECTERFTLRLPEDVRKRIMKDWKLNRTNSLLVLPRGGS 312

Query: 313 SRQGYRSELGKIGFVGNRSRSGRSEWRTLLPTTPLF 339
           SR+G   +         RSR+    W  L   TP F
Sbjct: 315 SRRGKPID---------RSRARSDRW--LFRKTPSF 312

[Close]

BLAST of HG10004470 vs. ExPASy Swiss-Prot
Match: O64763 (E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.6e-51
Identity = 143/374 (38.24%), Postives = 200/374 (53.48%), Query Frame = 0


Query: 13  LIHFILLSQISLAAAQS-GAPPDMYPFKQTISKRMAVILIVLVCFFIVLAVLSVYTRQCT 72
           L+  +LL  +     Q+   PP     K      + + ++ LV FF+V    S++ R+  
Sbjct: 19  LLLLLLLQSVPYGFGQTQTTPPGTTKTKPNDPVVVVITVLFLVIFFMVFG--SIFCRRSN 78

Query: 73  DQRFGGRLLLSTAQDGTN--ARSRR-AARGLDAAVIATFPTFVYSNVKDLKIGKGSLECA 132
            Q     +  ST  D  +   R RR  ARGLDA  I TFPTF+YS VK ++IGKG +ECA
Sbjct: 79  AQFSRSSIFRSTDADAESQVVRIRRLTARGLDAEAIETFPTFLYSEVKAVRIGKGGVECA 138

Query: 133 ICLSEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLV-PKPGDISFAALLNS 192
           +CL EFEDD+TLRL+P C HVFH+DC+D WL  HSTCP+CRA LV  + GD       + 
Sbjct: 139 VCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRADLVLNQQGD-------DD 198

Query: 193 DSGNNGDGHDEGNRGTGSETTQVVVRIPEGNQGQDVNLITPNQGLNQNGPIRSRSSG--- 252
           DS  +  G D G   + ++  + +V      +  D +L+      N N   RS+S+G   
Sbjct: 199 DSTESYSGTDPGTISSSTDPERGMVL-----ESSDAHLLDAVTWSNSNITPRSKSTGLSS 258

Query: 253 WRLSG-LFPRSHSTGHSLVQRGEDYERYTLRLPEEVRSELMNSNLNRARSCVAFPRVQSS 312
           W+++G LFPRSHSTGHSL+Q   + +R+TLRLP++VR +LM ++       +  P+ +SS
Sbjct: 259 WQITGILFPRSHSTGHSLIQPAGNLDRFTLRLPDDVRRQLMKTSRTMGHVAL-LPQARSS 318

Query: 313 RQGYRSELGKIG-----FVGNRSRSGRSEWRTLLPTTPLFRREGSRKDVNGD-------- 363
           R GYRS  G +G     F   R  +  +     L  +  FR    R   +GD        
Sbjct: 319 RSGYRS--GSVGSERSAFPYGRKSNNNNRRLHSLSFSFSFRSGSVRSTFSGDAPKNLPTS 375

[Close]

BLAST of HG10004470 vs. ExPASy Swiss-Prot
Match: Q8LGA5 (E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana OX=3702 GN=ATL31 PE=1 SV=2)

HSP 1 Score: 193.7 bits (491), Expect = 3.6e-48
Identity = 139/363 (38.29%), Postives = 179/363 (49.31%), Query Frame = 0


Query: 12  VLIHFILLSQISLAAAQSGAPP---DMYPFKQTISKRMAVILIVLVCFFIVLAVLSVYTR 71
           VL+ F+LL   S++A Q G P    D Y +  ++S  MAV+++V++     +   +VY R
Sbjct: 11  VLVLFLLL---SVSAGQPGTPDQRHDPYAYSGSLSPAMAVVVVVVIAALFFMGFFTVYIR 70

Query: 72  QCTDQRFGGRLLLSTAQDGTNARSRRA--ARGLDAAVIATFPTFVYSNVKDLKIGKGSLE 131
            CT    G      T   G   R   A  ARGLDA  I TFPTFVYS VK  KIGKG+LE
Sbjct: 71  HCTGAVDGS----VTPAGGARRRVTNATVARGLDAETIETFPTFVYSEVKTQKIGKGALE 130

Query: 132 CAICLSEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDISFAALLN 191
           CAICL+EFEDD+TLRLLPKC HVFH  CI AWL  H TCPVCR +L  +  +       +
Sbjct: 131 CAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNLAEQTPEPEVVVETD 190

Query: 192 SDSGNNGDGHDEGNRGTGSETTQVVVRIPEGNQGQDVNLITPNQGLNQNGPIRSRSSGWR 251
            ++               S     VV +P                               
Sbjct: 191 LEAQQQ------------SAVPVPVVELPRVK---------------------------- 250

Query: 252 LSGLFPRSHSTGHSLVQRGEDYERYTLRLPEEVRSELM-NSNLNRARSCVAFPRVQSSRQ 311
               FPRSH+TGHS+V  GE  +R+TLR+PEE+R ++M N  LNR+ S    PR  SSR 
Sbjct: 251 ----FPRSHTTGHSVVLPGESTDRFTLRVPEELRKKIMANWKLNRSNSVFVLPRGGSSRS 310

Query: 312 GYRSELGKIGFVGNRSRSGRSEWRTLLPTTPLF----RREGSRKDVNGDGGGRPFARLRP 365
           G + +         RSR+    W  L   TP F    R +GS + + G G  R  +   P
Sbjct: 311 GKQVD---------RSRAKSDRW--LFRKTPSFLWRNRDDGSIR-LGGTGSVRGNSVTSP 310

[Close]

BLAST of HG10004470 vs. ExPASy Swiss-Prot
Match: Q9M0R5 (Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana OX=3702 GN=ATL36 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 6.1e-48
Identity = 141/341 (41.35%), Postives = 187/341 (54.84%), Query Frame = 0


Query: 39  KQTISKRMAVILIVLVCFFIVLAVLSVYTRQCTDQRFGGRLLLSTAQDGTNARSRRAARG 98
           +QT     ++I IV++  FI L ++S     C    F    + +  QD  ++R+R   RG
Sbjct: 42  RQTNLSADSIIAIVVLAIFISLGMVSC----CLHCIFYREEIGAAGQDVLHSRAR---RG 101

Query: 99  LDAAVIATFPTFVYSNVKDLKIGKGSLECAICLSEFEDDDTLRLLPKCSHVFHSDCIDAW 158
           L+  VI +FPTF+YS VK LKIGKG +ECAICLSEFED +TLR +P CSH FH++CID W
Sbjct: 102 LEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVW 161

Query: 159 LVSHSTCPVCRASLVPKPGDISFAALLNSDSGNNGDGHDEGNRGTGSETTQVVVRIPEGN 218
           L S STCPVCRA+L  KPG+      LN D    G                 V ++P   
Sbjct: 162 LSSWSTCPVCRANLSLKPGE--SYPYLNMDVETGG-----------------VQKLP-NE 221

Query: 219 QGQDVNLITPNQGLNQNGPIRSRSSG----WRLSGLF-PRSHSTGHSLVQR-GEDYERYT 278
           +    N +T           RSRS+G    WR++ +F PRSHSTGHSLVQ+ GE+ +R+T
Sbjct: 222 RSLTGNSVT----------TRSRSTGLLSSWRMAEIFVPRSHSTGHSLVQQLGENLDRFT 281

Query: 279 LRLPEEVRSELMNSNLNRARSCVAFPRVQSSRQGYRSELGKIGFVGNRSRSGRSEWRTLL 338
           L+LPEEV+ +L++ NL R RS +  P+  SSRQGYRS  G +G        GR   R  L
Sbjct: 282 LQLPEEVQRQLVSLNLIR-RSHIVLPQAVSSRQGYRS--GSVGSERGGFSQGRQTHRRAL 341

Query: 339 PTTPLFRRE----GSRKDVNGDG-------GGRPFARLRPD 363
             +  F  +     S  D+N          G R F RL P+
Sbjct: 342 SMSFSFSFQTASVRSIHDMNDQAQAKDKYFGERSFERLMPE 342

[Close]

BLAST of HG10004470 vs. ExPASy TrEMBL
Match: A0A5A7VH05 (RING-H2 finger protein ATL11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004600 PE=4 SV=1)

HSP 1 Score: 645.6 bits (1664), Expect = 1.3e-181
Identity = 327/369 (88.62%), Postives = 342/369 (92.68%), Query Frame = 0


Query: 1   MTFPSFSFLNHVLIHFILLSQISLAAAQSGAPPDMYPFKQTISKRMAVILIVLVCFFIVL 60
           MT  S  FLNHV ++FILLS +SLAAAQSGAPPDMYPFKQTISKRMAV+LIVLVCFFIV+
Sbjct: 1   MTSQSLFFLNHVFVYFILLSHVSLAAAQSGAPPDMYPFKQTISKRMAVVLIVLVCFFIVV 60

Query: 61  AVLSVYTRQCTDQRFGGRLLLSTAQDGTNARSRRAARGLDAAVIATFPTFVYSNVKDLKI 120
           AVLSVYTRQCT+QRFGGRLLL T  DG NARSRRAARGLDAAVIATFPTFVYSNVKDLKI
Sbjct: 61  AVLSVYTRQCTEQRFGGRLLLPTHLDGANARSRRAARGLDAAVIATFPTFVYSNVKDLKI 120

Query: 121 GKGSLECAICLSEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDIS 180
           GKGSLECAICLSEF DDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDIS
Sbjct: 121 GKGSLECAICLSEFGDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDIS 180

Query: 181 FAALLNSDSGNNGDGHDEGNRGTGSETTQVVVRIPEGNQGQDVNLITPNQGLNQNGPIRS 240
           FAALLNSDSG +G+G DEGNRGTG+E  QV+VRIPE NQGQDVNLITPNQGLNQ+  IRS
Sbjct: 181 FAALLNSDSGIDGNGRDEGNRGTGAENNQVIVRIPEENQGQDVNLITPNQGLNQSRSIRS 240

Query: 241 RSSGWRLSGLFPRSHSTGHSLVQRGEDYERYTLRLPEEVRSELMNSNLNRARSCVAFPRV 300
           RSSGWRLSGLFPRSHSTGHSLVQRG DYERYTLRLPEEVRSEL+NSNLNRARSCVAF R+
Sbjct: 241 RSSGWRLSGLFPRSHSTGHSLVQRGVDYERYTLRLPEEVRSELLNSNLNRARSCVAFQRM 300

Query: 301 QSSRQGYRSELGKIGFVGNRSRSGRSEWRTLLPTTPLFRREGSRKDVNGDGGGRPFARLR 360
           QSSRQGYR+ELGK G VGNRSRSGRSEWRTLLP  PLF+REGSRKDVNGD GGRPFARLR
Sbjct: 301 QSSRQGYRNELGKNGLVGNRSRSGRSEWRTLLPGAPLFKREGSRKDVNGDDGGRPFARLR 360

Query: 361 PDGDGQSQQ 370
            D DGQSQQ
Sbjct: 361 ADCDGQSQQ 369

[Close]

BLAST of HG10004470 vs. ExPASy TrEMBL
Match: A0A1S3BBD9 (RING-H2 finger protein ATL11-like OS=Cucumis melo OX=3656 GN=LOC103488088 PE=4 SV=1)

HSP 1 Score: 645.6 bits (1664), Expect = 1.3e-181
Identity = 327/369 (88.62%), Postives = 342/369 (92.68%), Query Frame = 0


Query: 1   MTFPSFSFLNHVLIHFILLSQISLAAAQSGAPPDMYPFKQTISKRMAVILIVLVCFFIVL 60
           MT  S  FLNHV ++FILLS +SLAAAQSGAPPDMYPFKQTISKRMAV+LIVLVCFFIV+
Sbjct: 1   MTSQSLFFLNHVFVYFILLSHVSLAAAQSGAPPDMYPFKQTISKRMAVVLIVLVCFFIVV 60

Query: 61  AVLSVYTRQCTDQRFGGRLLLSTAQDGTNARSRRAARGLDAAVIATFPTFVYSNVKDLKI 120
           AVLSVYTRQCT+QRFGGRLLL T  DG NARSRRAARGLDAAVIATFPTFVYSNVKDLKI
Sbjct: 61  AVLSVYTRQCTEQRFGGRLLLPTHLDGANARSRRAARGLDAAVIATFPTFVYSNVKDLKI 120

Query: 121 GKGSLECAICLSEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDIS 180
           GKGSLECAICLSEF DDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDIS
Sbjct: 121 GKGSLECAICLSEFGDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDIS 180

Query: 181 FAALLNSDSGNNGDGHDEGNRGTGSETTQVVVRIPEGNQGQDVNLITPNQGLNQNGPIRS 240
           FAALLNSDSG +G+G DEGNRGTG+E  QV+VRIPE NQGQDVNLITPNQGLNQ+  IRS
Sbjct: 181 FAALLNSDSGIDGNGRDEGNRGTGAENNQVIVRIPEENQGQDVNLITPNQGLNQSRSIRS 240

Query: 241 RSSGWRLSGLFPRSHSTGHSLVQRGEDYERYTLRLPEEVRSELMNSNLNRARSCVAFPRV 300
           RSSGWRLSGLFPRSHSTGHSLVQRG DYERYTLRLPEEVRSEL+NSNLNRARSCVAF R+
Sbjct: 241 RSSGWRLSGLFPRSHSTGHSLVQRGVDYERYTLRLPEEVRSELLNSNLNRARSCVAFQRM 300

Query: 301 QSSRQGYRSELGKIGFVGNRSRSGRSEWRTLLPTTPLFRREGSRKDVNGDGGGRPFARLR 360
           QSSRQGYR+ELGK G VGNRSRSGRSEWRTLLP  PLF+REGSRKDVNGD GGRPFARLR
Sbjct: 301 QSSRQGYRNELGKNGLVGNRSRSGRSEWRTLLPGAPLFKREGSRKDVNGDDGGRPFARLR 360

Query: 361 PDGDGQSQQ 370
            D DGQSQQ
Sbjct: 361 ADCDGQSQQ 369

[Close]

BLAST of HG10004470 vs. ExPASy TrEMBL
Match: A0A0A0LNW5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G369210 PE=4 SV=1)

HSP 1 Score: 639.8 bits (1649), Expect = 7.0e-180
Identity = 325/369 (88.08%), Postives = 339/369 (91.87%), Query Frame = 0


Query: 1   MTFPSFSFLNHVLIHFILLSQISLAAAQSGAPPDMYPFKQTISKRMAVILIVLVCFFIVL 60
           MT  S  F+NHV I+FILLS +SL AAQSGAPPDMYPFKQTISKRMAV+LIVLVCFFIV+
Sbjct: 1   MTSQSLFFVNHVFIYFILLSHVSLTAAQSGAPPDMYPFKQTISKRMAVVLIVLVCFFIVV 60

Query: 61  AVLSVYTRQCTDQRFGGRLLLSTAQDGTNARSRRAARGLDAAVIATFPTFVYSNVKDLKI 120
           AVLSVYTRQCT+QRFGGRLLL    DGTNARSRRAARGLDAAVIATFPTFVYSNVKDLKI
Sbjct: 61  AVLSVYTRQCTEQRFGGRLLLPAPLDGTNARSRRAARGLDAAVIATFPTFVYSNVKDLKI 120

Query: 121 GKGSLECAICLSEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDIS 180
           GKGSLECAICLSEF DDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDIS
Sbjct: 121 GKGSLECAICLSEFGDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDIS 180

Query: 181 FAALLNSDSGNNGDGHDEGNRGTGSETTQVVVRIPEGNQGQDVNLITPNQGLNQNGPIRS 240
           FAALLNSDSG +G+G DEGNRGTGSE  QVVV+IPE NQGQDVNLITPNQGLNQ+  IRS
Sbjct: 181 FAALLNSDSGIDGNGRDEGNRGTGSENNQVVVQIPEENQGQDVNLITPNQGLNQSRSIRS 240

Query: 241 RSSGWRLSGLFPRSHSTGHSLVQRGEDYERYTLRLPEEVRSELMNSNLNRARSCVAFPRV 300
           RSSGWRLSGLFPRSHSTGHSLVQRG DYERYTLRLPEEVRSEL+NSNLNRARSCVAF R+
Sbjct: 241 RSSGWRLSGLFPRSHSTGHSLVQRGMDYERYTLRLPEEVRSELLNSNLNRARSCVAFQRM 300

Query: 301 QSSRQGYRSELGKIGFVGNRSRSGRSEWRTLLPTTPLFRREGSRKDVNGDGGGRPFARLR 360
           QSSRQGYR+ELGK G VGNRSRSGR EWRTLL   PL +REGSRK VNGD GGRPFARLR
Sbjct: 301 QSSRQGYRNELGKNGSVGNRSRSGRPEWRTLLAAAPLLKREGSRKGVNGDEGGRPFARLR 360

Query: 361 PDGDGQSQQ 370
           PDGDGQSQQ
Sbjct: 361 PDGDGQSQQ 369

[Close]

BLAST of HG10004470 vs. ExPASy TrEMBL
Match: A0A6J1KAR8 (RING-H2 finger protein ATL34-like OS=Cucurbita maxima OX=3661 GN=LOC111492163 PE=4 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 1.2e-155
Identity = 296/370 (80.00%), Postives = 312/370 (84.32%), Query Frame = 0


Query: 9   LNHVLIHFILLSQISLAAAQSG-----APPDMYPFKQTISKRMAVILIVLVCFFIVLAVL 68
           L   LIH ILLS ISLAAAQSG     +PP+MY FKQTISKRMAV+LIVLVCFFIVLA+L
Sbjct: 12  LTGFLIHSILLSHISLAAAQSGGPAVPSPPEMYSFKQTISKRMAVVLIVLVCFFIVLALL 71

Query: 69  SVYTRQCTDQRFGGRLLLSTAQDGTNARSRRAARGLDAAVIATFPTFVYSNVKDLKIGKG 128
           SVYTRQC DQRFGG LLL TA +G N R RRAARGLDAAVIA+FPTFVYSNVK LKIGKG
Sbjct: 72  SVYTRQCNDQRFGGHLLLPTAAEGINGRPRRAARGLDAAVIASFPTFVYSNVKGLKIGKG 131

Query: 129 SLECAICLSEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDISFAA 188
           +LECA+CLSEFEDD+TLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDISFAA
Sbjct: 132 ALECAVCLSEFEDDNTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDISFAA 191

Query: 189 LLNSDSGNNGDGHDEGNRGTGSETTQVVVRIPEGNQGQDVNLITPNQGLNQNGPIRSRSS 248
           LL+SDS  +G   D+GNR  G E  QV +RIPEGN          NQGLNQNGPIRSRS+
Sbjct: 192 LLDSDSRIHG---DDGNRVAGLENCQVGIRIPEGN--------PQNQGLNQNGPIRSRST 251

Query: 249 GWRLSGLFPRSHSTGHSLVQRGEDYERYTLRLPEEVRSELMNSNLNRARSCVAFPRVQSS 308
           GWRL GLFPRSHSTGHSLVQ G DYER+TLRLP EVRSEL+NSNLNRARSCVA PRVQSS
Sbjct: 252 GWRLIGLFPRSHSTGHSLVQIGADYERFTLRLPTEVRSELLNSNLNRARSCVALPRVQSS 311

Query: 309 RQGYRSELGKIGFVGNRSRSGRSEWRTLLPTTPLFRREGSRKD----VNGDGGGRPFARL 368
           RQGYRSELGK GFVGNRSRSGRSEW T  P TPLFRREGSR D    VNGDGGGRPF RL
Sbjct: 312 RQGYRSELGKNGFVGNRSRSGRSEWWTFFPATPLFRREGSRNDANVNVNGDGGGRPFVRL 370

Query: 369 RPDGDGQSQQ 370
           R DG GQSQQ
Sbjct: 372 RDDGHGQSQQ 370

[Close]

BLAST of HG10004470 vs. ExPASy TrEMBL
Match: A0A6J1HE61 (RING-H2 finger protein ATL34-like OS=Cucurbita moschata OX=3662 GN=LOC111462730 PE=4 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 7.8e-155
Identity = 294/370 (79.46%), Postives = 310/370 (83.78%), Query Frame = 0


Query: 9   LNHVLIHFILLSQISLAAAQSG-----APPDMYPFKQTISKRMAVILIVLVCFFIVLAVL 68
           L   LIH ILLS ISLAAAQSG     +PPDMY FKQTISKRMAV+LIVLVCFFIVLA+L
Sbjct: 12  LTGFLIHSILLSHISLAAAQSGGPTVPSPPDMYSFKQTISKRMAVVLIVLVCFFIVLALL 71

Query: 69  SVYTRQCTDQRFGGRLLLSTAQDGTNARSRRAARGLDAAVIATFPTFVYSNVKDLKIGKG 128
           SVYTRQC DQRF G LLL TA +G N R RRAARGLDAAVIA+FPTFVYSNVK LKIGKG
Sbjct: 72  SVYTRQCNDQRFAGHLLLPTAAEGINGRPRRAARGLDAAVIASFPTFVYSNVKGLKIGKG 131

Query: 129 SLECAICLSEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDISFAA 188
           +LECA+CLSEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDISFAA
Sbjct: 132 ALECAVCLSEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDISFAA 191

Query: 189 LLNSDSGNNGDGHDEGNRGTGSETTQVVVRIPEGNQGQDVNLITPNQGLNQNGPIRSRSS 248
           LL+SDS  +G   D+GNR  G E  QV +RIPEGN         PNQGLNQNGPI SRS+
Sbjct: 192 LLDSDSRIHG---DDGNRVAGLENCQVGIRIPEGN--------PPNQGLNQNGPIGSRST 251

Query: 249 GWRLSGLFPRSHSTGHSLVQRGEDYERYTLRLPEEVRSELMNSNLNRARSCVAFPRVQSS 308
           GWRL+GLFPRSHSTGHSLVQ G DYER+TLRLP EVRSEL+NSNLNRARSCVA PRVQSS
Sbjct: 252 GWRLTGLFPRSHSTGHSLVQIGADYERFTLRLPTEVRSELLNSNLNRARSCVALPRVQSS 311

Query: 309 RQGYRSELGKIGFVGNRSRSGRSEWRTLLPTTPLFRREGSRKDV----NGDGGGRPFARL 368
           RQGYRSELGK GF+GNRSRSGRSEW T  P TPLFRREG R D     NGDGGGRPF RL
Sbjct: 312 RQGYRSELGKNGFLGNRSRSGRSEWWTFFPATPLFRREGYRNDANVNGNGDGGGRPFVRL 370

Query: 369 RPDGDGQSQQ 370
           R D DGQSQQ
Sbjct: 372 RDDTDGQSQQ 370

[Close]

BLAST of HG10004470 vs. TAIR 10
Match: AT1G72200.1 (RING/U-box superfamily protein )

HSP 1 Score: 214.9 bits (546), Expect = 1.1e-55
Identity = 132/321 (41.12%), Postives = 187/321 (58.26%), Query Frame = 0


Query: 46  MAVILIVLVCFFIVLAVLSVYTRQCTDQRFGGRLLLSTAQDGTN--ARSRRAARGLDAAV 105
           MA+++IVLV  F  L   SVY R+C ++  G  +      D  N  A +R+ ARGLDA++
Sbjct: 63  MAILMIVLVSVFFFLGFFSVYIRRCLERVMG--MDYGNPNDAGNWLATNRQQARGLDASI 122

Query: 106 IATFPTFVYSNVKDLKIGKGSLECAICLSEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHS 165
           I TFPTF YS VK L+IGK +LEC++CL+EFEDD+TLRL+PKC HVFH  CIDAWL SH+
Sbjct: 123 IETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHT 182

Query: 166 TCPVCRASLVPKPGD----ISFAALLNSDSGNNGDGHDEGNRGTGSETTQVVVRIPEGNQ 225
           TCP+CRA L+P PG+    I    L+N   G++ +G  +  R  GS   +++  +     
Sbjct: 183 TCPLCRADLIPVPGESIVSIQIPGLVNDPPGSDPNG--DRIRSLGSPDARLIESV----- 242

Query: 226 GQDVNLITPNQGLNQNGPIRSRSSGWRLSGLFPRSHSTGHSLVQRGEDYERYTLRLPEEV 285
                 +T NQ +    P RS S+GW L+G+F  S  TG    Q  E+ +R+TLRLP+++
Sbjct: 243 -----ALTCNQSM----PRRSMSTGWNLAGMFTNSDRTG----QHSENLDRFTLRLPQDI 302

Query: 286 RSELMNSNLNRARSCVAFPRVQSSRQGYRSELGKIGFVGNR------SRSGRSEWRTLLP 345
            ++L+N NL++    VA P+V SS +GYR+  G +G   N        + GR + R    
Sbjct: 303 HNKLVNPNLSKVH--VALPQVMSSTRGYRT--GSLGSERNYFYYERFDQDGRLDRRPFSI 357

Query: 346 TTPLFRREGSRKDVNGDGGGR 355
           T P      +     G GG +
Sbjct: 363 TPPYRTSSINHMSPGGSGGDK 357

[Close]

BLAST of HG10004470 vs. TAIR 10
Match: AT2G35000.1 (RING/U-box superfamily protein )

HSP 1 Score: 204.9 bits (520), Expect = 1.1e-52
Identity = 143/374 (38.24%), Postives = 200/374 (53.48%), Query Frame = 0


Query: 13  LIHFILLSQISLAAAQS-GAPPDMYPFKQTISKRMAVILIVLVCFFIVLAVLSVYTRQCT 72
           L+  +LL  +     Q+   PP     K      + + ++ LV FF+V    S++ R+  
Sbjct: 19  LLLLLLLQSVPYGFGQTQTTPPGTTKTKPNDPVVVVITVLFLVIFFMVFG--SIFCRRSN 78

Query: 73  DQRFGGRLLLSTAQDGTN--ARSRR-AARGLDAAVIATFPTFVYSNVKDLKIGKGSLECA 132
            Q     +  ST  D  +   R RR  ARGLDA  I TFPTF+YS VK ++IGKG +ECA
Sbjct: 79  AQFSRSSIFRSTDADAESQVVRIRRLTARGLDAEAIETFPTFLYSEVKAVRIGKGGVECA 138

Query: 133 ICLSEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLV-PKPGDISFAALLNS 192
           +CL EFEDD+TLRL+P C HVFH+DC+D WL  HSTCP+CRA LV  + GD       + 
Sbjct: 139 VCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRADLVLNQQGD-------DD 198

Query: 193 DSGNNGDGHDEGNRGTGSETTQVVVRIPEGNQGQDVNLITPNQGLNQNGPIRSRSSG--- 252
           DS  +  G D G   + ++  + +V      +  D +L+      N N   RS+S+G   
Sbjct: 199 DSTESYSGTDPGTISSSTDPERGMVL-----ESSDAHLLDAVTWSNSNITPRSKSTGLSS 258

Query: 253 WRLSG-LFPRSHSTGHSLVQRGEDYERYTLRLPEEVRSELMNSNLNRARSCVAFPRVQSS 312
           W+++G LFPRSHSTGHSL+Q   + +R+TLRLP++VR +LM ++       +  P+ +SS
Sbjct: 259 WQITGILFPRSHSTGHSLIQPAGNLDRFTLRLPDDVRRQLMKTSRTMGHVAL-LPQARSS 318

Query: 313 RQGYRSELGKIG-----FVGNRSRSGRSEWRTLLPTTPLFRREGSRKDVNGD-------- 363
           R GYRS  G +G     F   R  +  +     L  +  FR    R   +GD        
Sbjct: 319 RSGYRS--GSVGSERSAFPYGRKSNNNNRRLHSLSFSFSFRSGSVRSTFSGDAPKNLPTS 375

[Close]

BLAST of HG10004470 vs. TAIR 10
Match: AT3G05200.1 (RING/U-box superfamily protein )

HSP 1 Score: 204.9 bits (520), Expect = 1.1e-52
Identity = 137/336 (40.77%), Postives = 177/336 (52.68%), Query Frame = 0


Query: 13  LIHFILLSQISLAAAQSGAPPDMYPFKQ-TISKRMAVILIVLVCFFIVLAVLSVYTRQCT 72
           ++  ++LS   LAA+QS   P   P+    +S  MAVI+++L+     +   S+Y R C+
Sbjct: 15  IVFLLILSSADLAASQSQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHCS 74

Query: 73  DQRFGGRLLLSTAQDGTNARSRRAARGLDAAVIATFPTFVYSNVKDLKIGKGSLECAICL 132
                G      A+  + A    AARGLD +V+ TFPTF+YS+VK  K+GKG LECAICL
Sbjct: 75  GVPDAGVSPAGGAR--SRATVNAAARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICL 134

Query: 133 SEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDISFAALLNSDSGN 192
           +EFEDD+TLRLLPKC HVFH  CIDAWL +H TCPVCRA+L  +  +             
Sbjct: 135 NEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAE------------- 194

Query: 193 NGDGHDEGNRGTGSETTQVVVRIPEGNQGQDVNLITPNQGLNQNGPIRSRSSGWRLSGL- 252
            G+  + G      E  QVVV     N    V    P Q       + S     RL G+ 
Sbjct: 195 -GESVEPGGTEPDLELQQVVV-----NPEPVVTAPVPEQ------LVTSEVDSRRLPGVP 254

Query: 253 -------FPRSHSTGHSLVQRGEDYERYTLRLPEEVRSELMNS-NLNRARSCVAFPRVQS 312
                  F RSH+TGHS+VQ GE  ER+TLRLPE+VR  +M    LNR  S +  PR  S
Sbjct: 255 VDLKRVKFSRSHTTGHSVVQPGECTERFTLRLPEDVRKRIMKDWKLNRTNSLLVLPRGGS 312

Query: 313 SRQGYRSELGKIGFVGNRSRSGRSEWRTLLPTTPLF 339
           SR+G   +         RSR+    W  L   TP F
Sbjct: 315 SRRGKPID---------RSRARSDRW--LFRKTPSF 312

[Close]

BLAST of HG10004470 vs. TAIR 10
Match: AT5G27420.1 (carbon/nitrogen insensitive 1 )

HSP 1 Score: 193.7 bits (491), Expect = 2.5e-49
Identity = 139/363 (38.29%), Postives = 179/363 (49.31%), Query Frame = 0


Query: 12  VLIHFILLSQISLAAAQSGAPP---DMYPFKQTISKRMAVILIVLVCFFIVLAVLSVYTR 71
           VL+ F+LL   S++A Q G P    D Y +  ++S  MAV+++V++     +   +VY R
Sbjct: 11  VLVLFLLL---SVSAGQPGTPDQRHDPYAYSGSLSPAMAVVVVVVIAALFFMGFFTVYIR 70

Query: 72  QCTDQRFGGRLLLSTAQDGTNARSRRA--ARGLDAAVIATFPTFVYSNVKDLKIGKGSLE 131
            CT    G      T   G   R   A  ARGLDA  I TFPTFVYS VK  KIGKG+LE
Sbjct: 71  HCTGAVDGS----VTPAGGARRRVTNATVARGLDAETIETFPTFVYSEVKTQKIGKGALE 130

Query: 132 CAICLSEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDISFAALLN 191
           CAICL+EFEDD+TLRLLPKC HVFH  CI AWL  H TCPVCR +L  +  +       +
Sbjct: 131 CAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNLAEQTPEPEVVVETD 190

Query: 192 SDSGNNGDGHDEGNRGTGSETTQVVVRIPEGNQGQDVNLITPNQGLNQNGPIRSRSSGWR 251
            ++               S     VV +P                               
Sbjct: 191 LEAQQQ------------SAVPVPVVELPRVK---------------------------- 250

Query: 252 LSGLFPRSHSTGHSLVQRGEDYERYTLRLPEEVRSELM-NSNLNRARSCVAFPRVQSSRQ 311
               FPRSH+TGHS+V  GE  +R+TLR+PEE+R ++M N  LNR+ S    PR  SSR 
Sbjct: 251 ----FPRSHTTGHSVVLPGESTDRFTLRVPEELRKKIMANWKLNRSNSVFVLPRGGSSRS 310

Query: 312 GYRSELGKIGFVGNRSRSGRSEWRTLLPTTPLF----RREGSRKDVNGDGGGRPFARLRP 365
           G + +         RSR+    W  L   TP F    R +GS + + G G  R  +   P
Sbjct: 311 GKQVD---------RSRAKSDRW--LFRKTPSFLWRNRDDGSIR-LGGTGSVRGNSVTSP 310

[Close]

BLAST of HG10004470 vs. TAIR 10
Match: AT4G09120.1 (RING/U-box superfamily protein )

HSP 1 Score: 193.0 bits (489), Expect = 4.3e-49
Identity = 141/341 (41.35%), Postives = 187/341 (54.84%), Query Frame = 0


Query: 39  KQTISKRMAVILIVLVCFFIVLAVLSVYTRQCTDQRFGGRLLLSTAQDGTNARSRRAARG 98
           +QT     ++I IV++  FI L ++S     C    F    + +  QD  ++R+R   RG
Sbjct: 42  RQTNLSADSIIAIVVLAIFISLGMVSC----CLHCIFYREEIGAAGQDVLHSRAR---RG 101

Query: 99  LDAAVIATFPTFVYSNVKDLKIGKGSLECAICLSEFEDDDTLRLLPKCSHVFHSDCIDAW 158
           L+  VI +FPTF+YS VK LKIGKG +ECAICLSEFED +TLR +P CSH FH++CID W
Sbjct: 102 LEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVW 161

Query: 159 LVSHSTCPVCRASLVPKPGDISFAALLNSDSGNNGDGHDEGNRGTGSETTQVVVRIPEGN 218
           L S STCPVCRA+L  KPG+      LN D    G                 V ++P   
Sbjct: 162 LSSWSTCPVCRANLSLKPGE--SYPYLNMDVETGG-----------------VQKLP-NE 221

Query: 219 QGQDVNLITPNQGLNQNGPIRSRSSG----WRLSGLF-PRSHSTGHSLVQR-GEDYERYT 278
           +    N +T           RSRS+G    WR++ +F PRSHSTGHSLVQ+ GE+ +R+T
Sbjct: 222 RSLTGNSVT----------TRSRSTGLLSSWRMAEIFVPRSHSTGHSLVQQLGENLDRFT 281

Query: 279 LRLPEEVRSELMNSNLNRARSCVAFPRVQSSRQGYRSELGKIGFVGNRSRSGRSEWRTLL 338
           L+LPEEV+ +L++ NL R RS +  P+  SSRQGYRS  G +G        GR   R  L
Sbjct: 282 LQLPEEVQRQLVSLNLIR-RSHIVLPQAVSSRQGYRS--GSVGSERGGFSQGRQTHRRAL 341

Query: 339 PTTPLFRRE----GSRKDVNGDG-------GGRPFARLRPD 363
             +  F  +     S  D+N          G R F RL P+
Sbjct: 342 SMSFSFSFQTASVRSIHDMNDQAQAKDKYFGERSFERLMPE 342

The following BLAST results are available for this feature:

BLAST of HG10004470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884270.1	9.3e-195	94.86	RING-H2 finger protein ATL11-like [Benincasa hispida]	[more]
XP_008444873.1	2.6e-181	88.62	PREDICTED: RING-H2 finger protein ATL11-like [Cucumis melo] >KAA0065125.1 RING-H...	[more]
XP_004152750.1	1.4e-179	88.08	RING-H2 finger protein ATL11 [Cucumis sativus] >KGN62719.1 hypothetical protein ...	[more]
KAG6598707.1	1.7e-156	80.87	RING-H2 finger protein ATL11, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7029649.1	1.7e-156	80.27	RING-H2 finger protein ATL11, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]

BLAST of HG10004470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84W40	1.5e-54	41.12	RING-H2 finger protein ATL11 OS=Arabidopsis thaliana OX=3702 GN=ATL11 PE=2 SV=2	[more]
Q8RXX9	1.6e-51	40.77	E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV...	[more]
O64763	1.6e-51	38.24	E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV...	[more]
Q8LGA5	3.6e-48	38.29	E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana OX=3702 GN=ATL31 PE=1 ...	[more]
Q9M0R5	6.1e-48	41.35	Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana OX=3702 GN=ATL36 P...	[more]

BLAST of HG10004470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VH05	1.3e-181	88.62	RING-H2 finger protein ATL11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A1S3BBD9	1.3e-181	88.62	RING-H2 finger protein ATL11-like OS=Cucumis melo OX=3656 GN=LOC103488088 PE=4 S...	[more]
A0A0A0LNW5	7.0e-180	88.08	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G369210 P...	[more]
A0A6J1KAR8	1.2e-155	80.00	RING-H2 finger protein ATL34-like OS=Cucurbita maxima OX=3661 GN=LOC111492163 PE...	[more]
A0A6J1HE61	7.8e-155	79.46	RING-H2 finger protein ATL34-like OS=Cucurbita moschata OX=3662 GN=LOC111462730 ...	[more]

BLAST of HG10004470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72200.1	1.1e-55	41.12	RING/U-box superfamily protein	[more]
AT2G35000.1	1.1e-52	38.24	RING/U-box superfamily protein	[more]
AT3G05200.1	1.1e-52	40.77	RING/U-box superfamily protein	[more]
AT5G27420.1	2.5e-49	38.29	carbon/nitrogen insensitive 1	[more]
AT4G09120.1	4.3e-49	41.35	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM01197	FANCL_C_2	coord: 123..176 e-value: 0.005 score: 1.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 340..369
None	No IPR available	PANTHER	PTHR14155:SF583	RING-H2 FINGER PROTEIN ATL11	coord: 7..301
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 7..301
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 126..169 e-value: 2.12658E-22 score: 86.9721
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 126..178
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 127..168 e-value: 5.9E-8 score: 42.4
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 126..169 e-value: 2.8E-15 score: 56.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 127..169 score: 12.99088
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 85..174 e-value: 8.0E-23 score: 81.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10004470.1	HG10004470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane