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HG10004466 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGATTTTTTCAATTTCTTCCTCTTCTTCAACCTACCTTCGTTCCACCATCCAATCCCACCGCCACCGCCACCACCTTCGTCACCGCCATGGATCAAACCTTAACACAACTCCGAGAAGGTTGCCTTTCCCAACTACCAAAAATGCCGAAAACTCAACTTTCCATATTATCACAACTTGCAGAGATAATATGGCCATTTACAGCGGCGAAGCCGATGGACTTCCACCTTTTCCTCCTCTCCCTGACACTCCTTTGTAATTTCACTTTTCTTATATTTTATGTTTTTTAGTTGATTAGTGATTTAATAAGTCTCGTATTAAATCGATTTGCTTTAATATTTGAGATTGGATTTGAATTGCAGGCCATTATGGATAGCTGGGGTGCTATTGTCTGCAATTCTATCAATTTGGAAGACCCAGAACTATTGGGCGCCTTTTCTTATGTTAAAGGGTAAGGAGTATAAATCGGAAATATAATCTTTTTTATTTTTTATTTTTTAAAATTAAACTTATTTTCTCTATTTCTTTACCAGAATTTACATCTTCCTTAACTATATATATATATATTTTTTTTTTTTTTGTTAGTTTTCAAATTTCCATTTAGTTTTGGAAAATATTGGTACAAATTAAGCAAAAATTTTAGATGTGGAAAAAATGTATATAAGTTTAAATCTAAAAAAATAAAAACCCAAATGATTACCAAATCGGGTTTTAACTTTTGTTTTTAATTTTTGAAAATTAAGTTTATTTCCTTTCAATTTCTTATAATGATTTGCATTTTTCTTAAGTAAAAATGTTGAATTCTTAGCCAAATTCCAAAATAAAAAAATTTTAAAAACTACCGCTACATTTGGTAACCATTTTATTTTTTCGTTTTTTATTTTAAAAAATTAAGCTTATAAACCCTTCTTCCATCTCTAAATTTCTAAATTTATTATCTACTTTTTACTTATATTTCCAAAAACCAAGCCAAAATTTGAAAACTAGAAAAAGTAGGAAAATTACTATAAACAGAAAAAATATCAAATCATTTACAAATATAGAAAATTTTTACTTTCTATCAGTGATAGATCGTGATAGAATTCTATCGCTTTCTATCGCGGTCTATCACTGATAGACTGTAAAAAAATTTATATATTTATAAATAGTTTGACTTATTTTTTTATATATGAAAAGAACCCAAAAAAAGTAGGTTTTAAAAATTTGTTTTTATTTTTACAATTTGGTCTAGAATTCAACTCTTTTCAACATTATAAAAAAAATGTGAGAAAATAGACTTAATTTTTAAAAACAAAAACAAAAAAAGGAAATGATTACGACGAAAACTAATAAATTTGATTCGATTTATTTATTTATTTCTATAAATTAAACTGAGAGATATATATAATCTGGGGTTGGTTTACGTTAAGTGAATATGATGATTTTGTATAGAGAAAGTGGATCAAGTGGTGGATGTGGTGGAAGATGTGGCGGAAATGGTGGAGACGGCGGCGGAGACAGTGGATAAGGTGGCGGAAGAGATTGCAGAACATTCTCCGGAAGGCAGCAAACTCCAACAGGCTGCATTATTCGTCGAAAAATCAGCGGAAAGGATTGCTAAGGATGCTGATTTTGCAGGAGATATTATTGACAAGGTTAGCCCTTTTCTCCAAATTCTAAACTTTACCCCATCAATTCATCTTAATTTTTTTTCTTTATTTCTATGTCCATATAGTTCAACGTCAAATATGAATTGGCATTTCTCTTCTATTCAATTAAGGGCGCATGAAATGTAACATAATTTAAATTGATATCTAAGTTTGACTCAATAATAAACCAATAGAAATTTTTTCTTTTCTCTTCTTTTAAAAAAAAAGTAAAATATTTATTTGTTAATTAATTCATAATTTTCTACTTATCAATAACATTTCTATCAACATCCATATTTAGAACCTACTTTTTTTTAAAAGTTGCAATATTACCAACTCTTAGAGTAAAACTACCGTACGAAAATCGAGATCTAAAAAAGTGAAAGTAAAAGTTACCACAAATTTTAGGTCACAATCACACCTATTCTAGATCCTAATTAATTTTTTAAAATTTTAATGAGTTCTTAATTCAATGATAGTTTATTCTAGTTTTCAGAAATAAAAATAATATATATTTAACTAAGTGAAAACGTTCATAAATAATAAGTATATTTTTCCTTTTAATTTAGCATTAAAAAATATTCCCTTTTTCTATGCTTGTAGAACATCTTTCTCTTTAAAAGAACTCGAGCACACCTCAACCAACTTGGTATTGAATTATTTAATTATTTGATTTGTTTTAAATATATCTGTCTTATTTAAAAAATTATTAAAATATTACCATTTAATTTTCATAACCATTATAATATTATAGGAGCAGTAATTTAAAAATAAAAATTTAGATCACACACTATTCTAATTCAATGCCACACCATTTTAAGTCTCAATTTTTTTTACTGTAAATTTTAAAGAATTTATACTCTATGAATAATTTTGAAATGTTTATGAAAAGATTGAGGTAATATTGTAATTTCATAAATTAAACAAATAATAATTTATGAAATTATTATTATAGTAGTTGCTAAAAAATAATAATAATAAATTTTTTCATAAATTATGTTGAGTTTATTTATGTTTATTTGGTTTATTATAGTAGTTTGAAATAATAATAATAATAATAATAATAATAATAATATATTTGTCATAAATACAATAATAATAATATTGTAATTTAATAAGACCATGAATTAAATAAATAATAATTTCATAGCCTTACAATTGTAGTAGGTGCTCTCCTATTAGTAGAAATTAGTTGGTTGATTAAATGTTATGGATGAGACTGAAAAAAGGGGCAATAATAGTGTTTTGAGTACAATTATAATAAGAGTAGGAGGACTCAATAATAATTTATATTGTGCTAACATATCTGTTTGTTGAACTAGCAAAATAATAATAGTAATAATAATAATTAAAAAAAAAAAAAAGTGTTTTACTGTGTATGGTGGGGGGTTTGATTAATTTGTATGGCTATTCTCAATTGCGTTTGTCTGCTCCCATTTCCCATCAATTTAAACCACCGTACCTTTGGTCGGAAAAATTTGAAGTTTCAATTACTAAATTTCATATTCTTTAACAATGCATTATATTTTAATATATTATTACTTTTATCCACGTTTTTTTTTATGAGGACTCCCTACCTAACCAATTGACGTAATCGACCCTTCTCTTTTGAGAAATCTAGTTTGGCCTATTTTCAAAATCTTCCAATTCTGTCCTTTTCACTTTACAATTCATTACGTTTTTTTTTTCCTCTCTCTCTTTGTTCGAACATGAGTTTTATCTCAAAACTAATTTGACAATAAAAAAAAAATAATCAATGCATCGAACTCTCCTTTTTTTTTTTTAATGTTAAATTCTCGACATACCCCTCAAGATGACGTGTTTTTATATCTGTGAGTGTGATAGCCAACTTACACACACCTTAACTAATCTCATGGAACAACCTATGTGCCCCTATAATATTTGGGTGTTATGCCCCTTAAGATGACATAAATTTTGAATTGACCATTTTTGGATTAAGCTGTGACACCATCTAGATAATATTTAGTTTTTTTTTATGTCAGATGCCTCTTCAAGATGGTGCCTCTTGGGTACCATTCTAGGTCTGATCTCTTTTTCTTTTTTTAGACCAAATATATCTGTTGAAGTTTCATAGACTTTGATATCATATTAGATAAACATGATATTTCATCTCAAAACTAATTAGCAATGAGTGTCCTATCTATTTTATCAAGATTGGAAAGTGATTTCTCCATCTTTTTAATGTGGAGCCACCATTTAGTTTTAAGATAGAAATTCTGAGATCATCTAACAACCTTTAATTTAATCAATAAATAATATTATTTAATTTTATTAATGGAGACTTTTTGTTTTTCTAATATGATTTATTATGAATATAAACCTCAGATTGAGGAAGCAGAAGACGAGTTGAGTACATTTATTAAGCAAAATGGAGAAAGTAAAGAAGAAGACGACGCAAAGCAAGAGAATGATCAAACTGAAGCCCGCGTCGAGGAACAAAGCAAGAAGGCAACCTCTTAA ATGTGGATTTTTTCAATTTCTTCCTCTTCTTCAACCTACCTTCGTTCCACCATCCAATCCCACCGCCACCGCCACCACCTTCGTCACCGCCATGGATCAAACCTTAACACAACTCCGAGAAGGTTGCCTTTCCCAACTACCAAAAATGCCGAAAACTCAACTTTCCATATTATCACAACTTGCAGAGATAATATGGCCATTTACAGCGGCGAAGCCGATGGACTTCCACCTTTTCCTCCTCTCCCTGACACTCCTTTGCCATTATGGATAGCTGGGGTGCTATTGTCTGCAATTCTATCAATTTGGAAGACCCAGAACTATTGGGCGCCTTTTCTTATGTTAAAGGAGAAAGTGGATCAAGTGGTGGATGTGGTGGAAGATGTGGCGGAAATGGTGGAGACGGCGGCGGAGACAGTGGATAAGGTGGCGGAAGAGATTGCAGAACATTCTCCGGAAGGCAGCAAACTCCAACAGGCTGCATTATTCGTCGAAAAATCAGCGGAAAGGATTGCTAAGGATGCTGATTTTGCAGGAGATATTATTGACAAGATTGAGGAAGCAGAAGACGAGTTGAGTACATTTATTAAGCAAAATGGAGAAAGTAAAGAAGAAGACGACGCAAAGCAAGAGAATGATCAAACTGAAGCCCGCGTCGAGGAACAAAGCAAGAAGGCAACCTCTTAA ATGTGGATTTTTTCAATTTCTTCCTCTTCTTCAACCTACCTTCGTTCCACCATCCAATCCCACCGCCACCGCCACCACCTTCGTCACCGCCATGGATCAAACCTTAACACAACTCCGAGAAGGTTGCCTTTCCCAACTACCAAAAATGCCGAAAACTCAACTTTCCATATTATCACAACTTGCAGAGATAATATGGCCATTTACAGCGGCGAAGCCGATGGACTTCCACCTTTTCCTCCTCTCCCTGACACTCCTTTGCCATTATGGATAGCTGGGGTGCTATTGTCTGCAATTCTATCAATTTGGAAGACCCAGAACTATTGGGCGCCTTTTCTTATGTTAAAGGAGAAAGTGGATCAAGTGGTGGATGTGGTGGAAGATGTGGCGGAAATGGTGGAGACGGCGGCGGAGACAGTGGATAAGGTGGCGGAAGAGATTGCAGAACATTCTCCGGAAGGCAGCAAACTCCAACAGGCTGCATTATTCGTCGAAAAATCAGCGGAAAGGATTGCTAAGGATGCTGATTTTGCAGGAGATATTATTGACAAGATTGAGGAAGCAGAAGACGAGTTGAGTACATTTATTAAGCAAAATGGAGAAAGTAAAGAAGAAGACGACGCAAAGCAAGAGAATGATCAAACTGAAGCCCGCGTCGAGGAACAAAGCAAGAAGGCAACCTCTTAA MWIFSISSSSSTYLRSTIQSHRHRHHLRHRHGSNLNTTPRRLPFPTTKNAENSTFHIITTCRDNMAIYSGEADGLPPFPPLPDTPLPLWIAGVLLSAILSIWKTQNYWAPFLMLKEKVDQVVDVVEDVAEMVETAAETVDKVAEEIAEHSPEGSKLQQAALFVEKSAERIAKDADFAGDIIDKIEEAEDELSTFIKQNGESKEEDDAKQENDQTEARVEEQSKKATS Homology
BLAST of HG10004466 vs. NCBI nr
Match: XP_038886505.1 (uncharacterized protein LOC120076681 isoform X1 [Benincasa hispida]) HSP 1 Score: 276.6 bits (706), Expect = 2.0e-70 Identity = 169/231 (73.16%), Postives = 193/231 (83.55%), Query Frame = 0
BLAST of HG10004466 vs. NCBI nr
Match: XP_038886507.1 (uncharacterized protein LOC120076681 isoform X3 [Benincasa hispida] >XP_038886572.1 uncharacterized protein LOC120076742 isoform X2 [Benincasa hispida]) HSP 1 Score: 232.6 bits (592), Expect = 3.3e-57 Identity = 138/188 (73.40%), Postives = 154/188 (81.91%), Query Frame = 0
BLAST of HG10004466 vs. NCBI nr
Match: XP_038886506.1 (uncharacterized protein LOC120076681 isoform X2 [Benincasa hispida] >XP_038886571.1 uncharacterized protein LOC120076742 isoform X1 [Benincasa hispida]) HSP 1 Score: 231.5 bits (589), Expect = 7.3e-57 Identity = 140/196 (71.43%), Postives = 156/196 (79.59%), Query Frame = 0
BLAST of HG10004466 vs. NCBI nr
Match: XP_011649672.1 (uncharacterized protein LOC105434653 isoform X2 [Cucumis sativus] >KAE8652133.1 hypothetical protein Csa_022545 [Cucumis sativus]) HSP 1 Score: 199.9 bits (507), Expect = 2.3e-47 Identity = 123/218 (56.42%), Postives = 151/218 (69.27%), Query Frame = 0
BLAST of HG10004466 vs. NCBI nr
Match: XP_011649671.1 (uncharacterized protein LOC105434653 isoform X1 [Cucumis sativus]) HSP 1 Score: 194.9 bits (494), Expect = 7.5e-46 Identity = 123/220 (55.91%), Postives = 151/220 (68.64%), Query Frame = 0
BLAST of HG10004466 vs. ExPASy TrEMBL
Match: A0A5A7VBX0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004630 PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 1.3e-40 Identity = 104/190 (54.74%), Postives = 130/190 (68.42%), Query Frame = 0
BLAST of HG10004466 vs. ExPASy TrEMBL
Match: A0A1S3BDR2 (uncharacterized protein LOC103488552 OS=Cucumis melo OX=3656 GN=LOC103488552 PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 1.3e-40 Identity = 104/190 (54.74%), Postives = 130/190 (68.42%), Query Frame = 0
BLAST of HG10004466 vs. ExPASy TrEMBL
Match: A0A6J1K717 (uncharacterized protein LOC111492223 OS=Cucurbita maxima OX=3661 GN=LOC111492223 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 1.1e-39 Identity = 116/217 (53.46%), Postives = 145/217 (66.82%), Query Frame = 0
BLAST of HG10004466 vs. ExPASy TrEMBL
Match: A0A6J1HCK6 (uncharacterized protein LOC111462754 OS=Cucurbita moschata OX=3662 GN=LOC111462754 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.3e-39 Identity = 114/214 (53.27%), Postives = 141/214 (65.89%), Query Frame = 0
BLAST of HG10004466 vs. ExPASy TrEMBL
Match: A0A6J1BVN6 (uncharacterized protein LOC111005138 OS=Momordica charantia OX=3673 GN=LOC111005138 PE=4 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 2.9e-35 Identity = 98/192 (51.04%), Postives = 132/192 (68.75%), Query Frame = 0
BLAST of HG10004466 vs. TAIR 10
Match: AT2G14095.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 106 Blast hits to 103 proteins in 21 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 4; Plants - 87; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 57.8 bits (138), Expect = 1.3e-08 Identity = 48/139 (34.53%), Postives = 75/139 (53.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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