HG10004450 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10004450
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	methyl-CpG-binding domain-containing protein 8-like
Location	Chr08: 17185056 .. 17185721 (-)
RNA-Seq Expression	HG10004450
Synteny	HG10004450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCACAACTATGGTTGCTTCCCCTTCCAATGATAGTTTCCGCATGAATCCGCTTCCGATCATAGATCTCCGTCTCCTCTCCCAATCCGAGCTCTATTGTCTTTCTCGTTTCTCCTCCTCCTCCTCATCTTCTTCTTCTTCAACCTCCCAATCCAACAACGAAGATGACGTTCTAATCCCCAAAATTGATCGATCTGTCTTCAACGAGTCCGCCGGTAGCCGAAAACAAACCTATTCTCGCCTCCGTTTAGCCCCTCGCAAACCCCAATTTTCTTCCTCTTCATCCTCCTCCACAATTCGCCCTCAATCCCCCGACCGCCTAGATACAGAGAGCGCTCAAATTGTTACTCTATTTAACCAACTCTTCGTTGGAGATTCTCATTGTGCCGTCAACGATAACTACGCCGACGGAGATGAGGACCTGGTACTTGTTAACCACATTTACGATGAATCGGTACCTGATTCTTCCTACGCTATTTTCCAGAGTATTCCTGTTGATATTATTGATAGCAGTTACGCCCCGGTTAAGCGGCGGAGAGGGCGACCGCGGAAGGATAGCAATCGGTTTGCTCAGAGTAATGGAAATGCGGCTCCGGAATTCAAAAGCGGATGCGATAAACCGGCAGCGGCGGAGGAGGAGATCGTAATGGTAATGCTGTGA

mRNA sequence

ATGGCTTCCACAACTATGGTTGCTTCCCCTTCCAATGATAGTTTCCGCATGAATCCGCTTCCGATCATAGATCTCCGTCTCCTCTCCCAATCCGAGCTCTATTGTCTTTCTCGTTTCTCCTCCTCCTCCTCATCTTCTTCTTCTTCAACCTCCCAATCCAACAACGAAGATGACGTTCTAATCCCCAAAATTGATCGATCTGTCTTCAACGAGTCCGCCGGTAGCCGAAAACAAACCTATTCTCGCCTCCGTTTAGCCCCTCGCAAACCCCAATTTTCTTCCTCTTCATCCTCCTCCACAATTCGCCCTCAATCCCCCGACCGCCTAGATACAGAGAGCGCTCAAATTGTTACTCTATTTAACCAACTCTTCGTTGGAGATTCTCATTGTGCCGTCAACGATAACTACGCCGACGGAGATGAGGACCTGGTACTTGTTAACCACATTTACGATGAATCGGTACCTGATTCTTCCTACGCTATTTTCCAGAGTATTCCTGTTGATATTATTGATAGCAGTTACGCCCCGGTTAAGCGGCGGAGAGGGCGACCGCGGAAGGATAGCAATCGGTTTGCTCAGAGTAATGGAAATGCGGCTCCGGAATTCAAAAGCGGATGCGATAAACCGGCAGCGGCGGAGGAGGAGATCGTAATGGTAATGCTGTGA

Coding sequence (CDS)

ATGGCTTCCACAACTATGGTTGCTTCCCCTTCCAATGATAGTTTCCGCATGAATCCGCTTCCGATCATAGATCTCCGTCTCCTCTCCCAATCCGAGCTCTATTGTCTTTCTCGTTTCTCCTCCTCCTCCTCATCTTCTTCTTCTTCAACCTCCCAATCCAACAACGAAGATGACGTTCTAATCCCCAAAATTGATCGATCTGTCTTCAACGAGTCCGCCGGTAGCCGAAAACAAACCTATTCTCGCCTCCGTTTAGCCCCTCGCAAACCCCAATTTTCTTCCTCTTCATCCTCCTCCACAATTCGCCCTCAATCCCCCGACCGCCTAGATACAGAGAGCGCTCAAATTGTTACTCTATTTAACCAACTCTTCGTTGGAGATTCTCATTGTGCCGTCAACGATAACTACGCCGACGGAGATGAGGACCTGGTACTTGTTAACCACATTTACGATGAATCGGTACCTGATTCTTCCTACGCTATTTTCCAGAGTATTCCTGTTGATATTATTGATAGCAGTTACGCCCCGGTTAAGCGGCGGAGAGGGCGACCGCGGAAGGATAGCAATCGGTTTGCTCAGAGTAATGGAAATGCGGCTCCGGAATTCAAAAGCGGATGCGATAAACCGGCAGCGGCGGAGGAGGAGATCGTAATGGTAATGCTGTGA

Protein sequence

MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFNQLFVGDSHCAVNDNYADGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPVKRRRGRPRKDSNRFAQSNGNAAPEFKSGCDKPAAAEEEIVMVML

Homology

[Close]

BLAST of HG10004450 vs. NCBI nr
Match: XP_038885026.1 (methyl-CpG-binding domain-containing protein 8 isoform X2 [Benincasa hispida])

HSP 1 Score: 396.4 bits (1017), Expect = 1.7e-106
Identity = 215/226 (95.13%), Postives = 217/226 (96.02%), Query Frame = 0


Query: 1   MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSSTSQSNNEDDVL 60
           MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRF SSSSSSSSSTSQSNNEDDVL
Sbjct: 1   MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRF-SSSSSSSSSTSQSNNEDDVL 60

Query: 61  IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLF 120
           IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLF
Sbjct: 61  IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLF 120

Query: 121 NQLFVGDSHCAVNDNYADGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPVKRR 180
            QLFVGD HCAVND+Y DGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAP+KRR
Sbjct: 121 KQLFVGDPHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRR 180

Query: 181 RGRPRKDSNRFAQSNGNAAPEFKSGCDKPAAA-----EEEIVMVML 222
           RGRPRKDSNRFAQSNGNAAPEFKSGCDKPAAA     EEEIVMVML
Sbjct: 181 RGRPRKDSNRFAQSNGNAAPEFKSGCDKPAAAAAEEEEEEIVMVML 225

[Close]

BLAST of HG10004450 vs. NCBI nr
Match: XP_038885025.1 (methyl-CpG-binding domain-containing protein 8 isoform X1 [Benincasa hispida])

HSP 1 Score: 391.3 bits (1004), Expect = 5.4e-105
Identity = 212/223 (95.07%), Postives = 214/223 (95.96%), Query Frame = 0


Query: 1   MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSSTSQSNNEDDVL 60
           MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRF SSSSSSSSSTSQSNNEDDVL
Sbjct: 1   MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRF-SSSSSSSSSTSQSNNEDDVL 60

Query: 61  IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLF 120
           IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLF
Sbjct: 61  IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLF 120

Query: 121 NQLFVGDSHCAVNDNYADGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPVKRR 180
            QLFVGD HCAVND+Y DGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAP+KRR
Sbjct: 121 KQLFVGDPHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRR 180

Query: 181 RGRPRKDSNRFAQSNGNAAPEFKSGCDKPAAA-----EEEIVM 219
           RGRPRKDSNRFAQSNGNAAPEFKSGCDKPAAA     EEEIVM
Sbjct: 181 RGRPRKDSNRFAQSNGNAAPEFKSGCDKPAAAAAEEEEEEIVM 222

[Close]

BLAST of HG10004450 vs. NCBI nr
Match: XP_004152635.1 (methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis sativus] >KGN62697.1 hypothetical protein Csa_022593 [Cucumis sativus])

HSP 1 Score: 377.5 bits (968), Expect = 8.0e-101
Identity = 204/224 (91.07%), Postives = 210/224 (93.75%), Query Frame = 0


Query: 1   MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSSTSQSNNEDDVL 60
           MASTTMV S SNDS+RMNPLPIIDLRLLSQSEL+CLSRF  SSSSSSSSTSQSNNEDDVL
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF--SSSSSSSSTSQSNNEDDVL 60

Query: 61  IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLF 120
           IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIV LF
Sbjct: 61  IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVHLF 120

Query: 121 NQLFVGDSHCAVNDNYADGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPVKRR 180
           NQLFVGDSHC VND+Y DGDEDLVLVNH YDESVPDSSYAIFQSIPVD+IDSS  P+KRR
Sbjct: 121 NQLFVGDSHCVVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSQVPIKRR 180

Query: 181 RGRPRKDSNRFAQSNGNAAPEFKSGCDKP---AAAEEEIVMVML 222
           RGRPRKDSNRF QSNGNAAPEFKSGCDKP   AAA+EEIVMVML
Sbjct: 181 RGRPRKDSNRFVQSNGNAAPEFKSGCDKPAAAAAAKEEIVMVML 222

[Close]

BLAST of HG10004450 vs. NCBI nr
Match: XP_008444843.1 (PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis melo] >KAA0065145.1 methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 374.8 bits (961), Expect = 5.2e-100
Identity = 204/223 (91.48%), Postives = 211/223 (94.62%), Query Frame = 0


Query: 1   MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSSTSQSNNEDDVL 60
           MASTTMV S SNDS+RMNPLPIIDLRLLSQSEL+CLSRF  SSSSSSSSTSQSNNEDDVL
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF--SSSSSSSSTSQSNNEDDVL 60

Query: 61  IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLF 120
           IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQS DRLDTESAQIV LF
Sbjct: 61  IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLF 120

Query: 121 NQLFVGDSHCAVNDNYADGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPVKRR 180
           NQLFVGDSHCAVND++ DGDEDLVLVNH YDESVPDSSYAIFQSIPVD+IDSS+AP+KRR
Sbjct: 121 NQLFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRR 180

Query: 181 RGRPRKDSNRFAQSNGNAAPEFKSGCDKP--AAAEEEIVMVML 222
           RGRPRKDSNRF QSNGNAAPEFKSG DKP  AAAEEEIVMVML
Sbjct: 181 RGRPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVMVML 221

[Close]

BLAST of HG10004450 vs. NCBI nr
Match: XP_004152634.1 (methyl-CpG-binding domain-containing protein 8 isoform X1 [Cucumis sativus])

HSP 1 Score: 372.5 bits (955), Expect = 2.6e-99
Identity = 201/221 (90.95%), Postives = 207/221 (93.67%), Query Frame = 0


Query: 1   MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSSTSQSNNEDDVL 60
           MASTTMV S SNDS+RMNPLPIIDLRLLSQSEL+CLSRF  SSSSSSSSTSQSNNEDDVL
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF--SSSSSSSSTSQSNNEDDVL 60

Query: 61  IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLF 120
           IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIV LF
Sbjct: 61  IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVHLF 120

Query: 121 NQLFVGDSHCAVNDNYADGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPVKRR 180
           NQLFVGDSHC VND+Y DGDEDLVLVNH YDESVPDSSYAIFQSIPVD+IDSS  P+KRR
Sbjct: 121 NQLFVGDSHCVVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSQVPIKRR 180

Query: 181 RGRPRKDSNRFAQSNGNAAPEFKSGCDKP---AAAEEEIVM 219
           RGRPRKDSNRF QSNGNAAPEFKSGCDKP   AAA+EEIVM
Sbjct: 181 RGRPRKDSNRFVQSNGNAAPEFKSGCDKPAAAAAAKEEIVM 219

[Close]

BLAST of HG10004450 vs. ExPASy Swiss-Prot
Match: Q9LME6 (Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana OX=3702 GN=MBD8 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 8.8e-18
Identity = 79/176 (44.89%), Postives = 102/176 (57.95%), Query Frame = 0


Query: 20  LPIIDLRLLSQSELYCLSRFSSSSSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQT 79
           LP+ID RLLSQSEL  LS+ SS S SSS+S + S   DD L PKIDRSVFNESAGSRKQT
Sbjct: 26  LPLIDTRLLSQSELRALSQCSSLSPSSSASLAASAGGDDDLTPKIDRSVFNESAGSRKQT 85

Query: 80  YSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFNQLFVGDSHCAVNDNYADG 139
           + RLRLA R PQ      S   + Q  D    E  Q+ +L   LF  DS+ +  +   +G
Sbjct: 86  FLRLRLA-RHPQPPEEPPSP--QRQRDDSSREEQTQVASLLRSLFNVDSNQS-KEEEDEG 145

Query: 140 DEDLVLVNHIYDESVPDSSYAIFQSIPVDIID------SSYAPVKRRRGRPRKDSN 190
           +E+L       +  +  +SY ++Q   +D I       +S   +KR+RGRPRK  N
Sbjct: 146 EEEL----EDNEGQIHYNSY-VYQRPNLDSIQNVLIQGTSGNKIKRKRGRPRKIRN 192

[Close]

BLAST of HG10004450 vs. ExPASy TrEMBL
Match: A0A0A0LPH8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368980 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 3.9e-101
Identity = 204/224 (91.07%), Postives = 210/224 (93.75%), Query Frame = 0


Query: 1   MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSSTSQSNNEDDVL 60
           MASTTMV S SNDS+RMNPLPIIDLRLLSQSEL+CLSRF  SSSSSSSSTSQSNNEDDVL
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF--SSSSSSSSTSQSNNEDDVL 60

Query: 61  IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLF 120
           IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIV LF
Sbjct: 61  IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVHLF 120

Query: 121 NQLFVGDSHCAVNDNYADGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPVKRR 180
           NQLFVGDSHC VND+Y DGDEDLVLVNH YDESVPDSSYAIFQSIPVD+IDSS  P+KRR
Sbjct: 121 NQLFVGDSHCVVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSQVPIKRR 180

Query: 181 RGRPRKDSNRFAQSNGNAAPEFKSGCDKP---AAAEEEIVMVML 222
           RGRPRKDSNRF QSNGNAAPEFKSGCDKP   AAA+EEIVMVML
Sbjct: 181 RGRPRKDSNRFVQSNGNAAPEFKSGCDKPAAAAAAKEEIVMVML 222

[Close]

BLAST of HG10004450 vs. ExPASy TrEMBL
Match: A0A5A7VH26 (Methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004810 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.5e-100
Identity = 204/223 (91.48%), Postives = 211/223 (94.62%), Query Frame = 0


Query: 1   MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSSTSQSNNEDDVL 60
           MASTTMV S SNDS+RMNPLPIIDLRLLSQSEL+CLSRF  SSSSSSSSTSQSNNEDDVL
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF--SSSSSSSSTSQSNNEDDVL 60

Query: 61  IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLF 120
           IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQS DRLDTESAQIV LF
Sbjct: 61  IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLF 120

Query: 121 NQLFVGDSHCAVNDNYADGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPVKRR 180
           NQLFVGDSHCAVND++ DGDEDLVLVNH YDESVPDSSYAIFQSIPVD+IDSS+AP+KRR
Sbjct: 121 NQLFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRR 180

Query: 181 RGRPRKDSNRFAQSNGNAAPEFKSGCDKP--AAAEEEIVMVML 222
           RGRPRKDSNRF QSNGNAAPEFKSG DKP  AAAEEEIVMVML
Sbjct: 181 RGRPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVMVML 221

[Close]

BLAST of HG10004450 vs. ExPASy TrEMBL
Match: A0A1S3BAU3 (methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488067 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.5e-100
Identity = 204/223 (91.48%), Postives = 211/223 (94.62%), Query Frame = 0


Query: 1   MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSSTSQSNNEDDVL 60
           MASTTMV S SNDS+RMNPLPIIDLRLLSQSEL+CLSRF  SSSSSSSSTSQSNNEDDVL
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF--SSSSSSSSTSQSNNEDDVL 60

Query: 61  IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLF 120
           IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQS DRLDTESAQIV LF
Sbjct: 61  IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLF 120

Query: 121 NQLFVGDSHCAVNDNYADGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPVKRR 180
           NQLFVGDSHCAVND++ DGDEDLVLVNH YDESVPDSSYAIFQSIPVD+IDSS+AP+KRR
Sbjct: 121 NQLFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRR 180

Query: 181 RGRPRKDSNRFAQSNGNAAPEFKSGCDKP--AAAEEEIVMVML 222
           RGRPRKDSNRF QSNGNAAPEFKSG DKP  AAAEEEIVMVML
Sbjct: 181 RGRPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVMVML 221

[Close]

BLAST of HG10004450 vs. ExPASy TrEMBL
Match: A0A1S3BC64 (methyl-CpG-binding domain-containing protein 8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488067 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 8.1e-99
Identity = 201/220 (91.36%), Postives = 208/220 (94.55%), Query Frame = 0


Query: 1   MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSSTSQSNNEDDVL 60
           MASTTMV S SNDS+RMNPLPIIDLRLLSQSEL+CLSRF  SSSSSSSSTSQSNNEDDVL
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF--SSSSSSSSTSQSNNEDDVL 60

Query: 61  IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLF 120
           IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQS DRLDTESAQIV LF
Sbjct: 61  IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLF 120

Query: 121 NQLFVGDSHCAVNDNYADGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPVKRR 180
           NQLFVGDSHCAVND++ DGDEDLVLVNH YDESVPDSSYAIFQSIPVD+IDSS+AP+KRR
Sbjct: 121 NQLFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRR 180

Query: 181 RGRPRKDSNRFAQSNGNAAPEFKSGCDKP--AAAEEEIVM 219
           RGRPRKDSNRF QSNGNAAPEFKSG DKP  AAAEEEIVM
Sbjct: 181 RGRPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVM 218

[Close]

BLAST of HG10004450 vs. ExPASy TrEMBL
Match: A0A6J1BS27 (methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111005043 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 7.8e-94
Identity = 190/221 (85.97%), Postives = 202/221 (91.40%), Query Frame = 0


Query: 1   MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSSTSQSNNEDDVL 60
           MASTTMVASPSN+SFRMN LPIIDLRLLSQSELYCLSRF    SSSSSSTSQSN++DDVL
Sbjct: 1   MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRF----SSSSSSTSQSNDDDDVL 60

Query: 61  IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLF 120
           IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQF SSSSSS IRPQSP+RLD ESA+I+TLF
Sbjct: 61  IPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRPQSPERLDAESAKIITLF 120

Query: 121 NQLFVGDSHCAVNDNYADGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPVKRR 180
            QLFVGDSHC V+++Y D DEDLVL+NHIYDESVPDSSYAIFQSIPVDIIDSSYAP+KRR
Sbjct: 121 KQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRR 180

Query: 181 RGRPRKDSNRFAQSNGNAAPEFKSGCDKPAAAEEEIVMVML 222
           RGRPRKDSNRF QSNGNA P  KSGC+K  A EEEIVMVML
Sbjct: 181 RGRPRKDSNRFPQSNGNAVPNSKSGCEK-RAEEEEIVMVML 216

[Close]

BLAST of HG10004450 vs. TAIR 10
Match: AT1G22310.2 (methyl-CPG-binding domain 8 )

HSP 1 Score: 92.0 bits (227), Expect = 6.2e-19
Identity = 79/176 (44.89%), Postives = 102/176 (57.95%), Query Frame = 0


Query: 20  LPIIDLRLLSQSELYCLSRFSSSSSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQT 79
           LP+ID RLLSQSEL  LS+ SS S SSS+S + S   DD L PKIDRSVFNESAGSRKQT
Sbjct: 26  LPLIDTRLLSQSELRALSQCSSLSPSSSASLAASAGGDDDLTPKIDRSVFNESAGSRKQT 85

Query: 80  YSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFNQLFVGDSHCAVNDNYADG 139
           + RLRLA R PQ      S   + Q  D    E  Q+ +L   LF  DS+ +  +   +G
Sbjct: 86  FLRLRLA-RHPQPPEEPPSP--QRQRDDSSREEQTQVASLLRSLFNVDSNQS-KEEEDEG 145

Query: 140 DEDLVLVNHIYDESVPDSSYAIFQSIPVDIID------SSYAPVKRRRGRPRKDSN 190
           +E+L       +  +  +SY ++Q   +D I       +S   +KR+RGRPRK  N
Sbjct: 146 EEEL----EDNEGQIHYNSY-VYQRPNLDSIQNVLIQGTSGNKIKRKRGRPRKIRN 192

The following BLAST results are available for this feature:

BLAST of HG10004450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885026.1	1.7e-106	95.13	methyl-CpG-binding domain-containing protein 8 isoform X2 [Benincasa hispida]	[more]
XP_038885025.1	5.4e-105	95.07	methyl-CpG-binding domain-containing protein 8 isoform X1 [Benincasa hispida]	[more]
XP_004152635.1	8.0e-101	91.07	methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis sativus] >KGN...	[more]
XP_008444843.1	5.2e-100	91.48	PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis me...	[more]
XP_004152634.1	2.6e-99	90.95	methyl-CpG-binding domain-containing protein 8 isoform X1 [Cucumis sativus]	[more]

BLAST of HG10004450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LME6	8.8e-18	44.89	Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of HG10004450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPH8	3.9e-101	91.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368980 PE=4 SV=1	[more]
A0A5A7VH26	2.5e-100	91.48	Methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Cucumis melo var. m...	[more]
A0A1S3BAU3	2.5e-100	91.48	methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Cucumis melo OX=365...	[more]
A0A1S3BC64	8.1e-99	91.36	methyl-CpG-binding domain-containing protein 8 isoform X1 OS=Cucumis melo OX=365...	[more]
A0A6J1BS27	7.8e-94	85.97	methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Momordica charantia...	[more]

BLAST of HG10004450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22310.2	6.2e-19	44.89	methyl-CPG-binding domain 8	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..207
None	No IPR available	PANTHER	PTHR37701:SF1	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8	coord: 6..195
IPR037472	Methyl-CpG-binding domain-containing protein 8	PANTHER	PTHR37701	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8	coord: 6..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10004450.1	HG10004450.1	mRNA