HG10004387 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGATTTTGGTGCAGCTGCATCTGAGTTTCCAGGCTTTCAAACCAGTGTTGCTCACAAAGACGACGTCGTTTACAGGAGGTCGTTGACTCGGTTGCAACGCCACGCTCCCCACCCTCTCCCGTTACCACGCCTCACCTCTTGTCCCTCGTGCGACGGTGCATCGAAACGACTATCTATTGACAACAACACTTGTTCTTTTTCTTCAACATCAAATGCACCTTTTCACTGTAGAGATCCGATCCAGTTACTTTCACCTCTCATGTCGTTGTTTGAATCTCGCTATGTCATAGAGCAAAATATTATTAATAAGTCTGGTTGA ATGGAGGATTTTGGTGCAGCTGCATCTGAGTTTCCAGGCTTTCAAACCAGTGTTGCTCACAAAGACGACGTCGTTTACAGGAGGTCGTTGACTCGGTTGCAACGCCACGCTCCCCACCCTCTCCCGTTACCACGCCTCACCTCTTGTCCCTCGTGCGACGGTGCATCGAAACGACTATCTATTGACAACAACACTTGTTCTTTTTCTTCAACATCAAATGCACCTTTTCACTGTAGAGATCCGATCCAGTTACTTTCACCTCTCATGTCGTTGTTTGAATCTCGCTATGTCATAGAGCAAAATATTATTAATAAGTCTGGTTGA ATGGAGGATTTTGGTGCAGCTGCATCTGAGTTTCCAGGCTTTCAAACCAGTGTTGCTCACAAAGACGACGTCGTTTACAGGAGGTCGTTGACTCGGTTGCAACGCCACGCTCCCCACCCTCTCCCGTTACCACGCCTCACCTCTTGTCCCTCGTGCGACGGTGCATCGAAACGACTATCTATTGACAACAACACTTGTTCTTTTTCTTCAACATCAAATGCACCTTTTCACTGTAGAGATCCGATCCAGTTACTTTCACCTCTCATGTCGTTGTTTGAATCTCGCTATGTCATAGAGCAAAATATTATTAATAAGTCTGGTTGA MEDFGAAASEFPGFQTSVAHKDDVVYRRSLTRLQRHAPHPLPLPRLTSCPSCDGASKRLSIDNNTCSFSSTSNAPFHCRDPIQLLSPLMSLFESRYVIEQNIINKSG Homology
BLAST of HG10004387 vs. NCBI nr
Match: KAE8647257.1 (hypothetical protein Csa_018305, partial [Cucumis sativus]) HSP 1 Score: 143.7 bits (361), Expect = 9.4e-31 Identity = 81/113 (71.68%), Postives = 90/113 (79.65%), Query Frame = 0
BLAST of HG10004387 vs. NCBI nr
Match: KAB1206573.1 (hypothetical protein CJ030_MR7G020458 [Morella rubra] >KAB1206574.1 hypothetical protein CJ030_MR7G020459 [Morella rubra]) HSP 1 Score: 85.1 bits (209), Expect = 4.0e-13 Identity = 52/98 (53.06%), Postives = 66/98 (67.35%), Query Frame = 0
BLAST of HG10004387 vs. NCBI nr
Match: PON64471.1 (hypothetical protein TorRG33x02_273200 [Trema orientale]) HSP 1 Score: 77.4 bits (189), Expect = 8.3e-11 Identity = 51/105 (48.57%), Postives = 67/105 (63.81%), Query Frame = 0
BLAST of HG10004387 vs. NCBI nr
Match: XP_042979927.1 (uncharacterized protein LOC122310107 [Carya illinoinensis] >KAG2706907.1 hypothetical protein I3760_05G123700 [Carya illinoinensis] >KAG6654100.1 hypothetical protein CIPAW_05G122300 [Carya illinoinensis] >KAG6712790.1 hypothetical protein I3842_05G119400 [Carya illinoinensis]) HSP 1 Score: 77.4 bits (189), Expect = 8.3e-11 Identity = 50/103 (48.54%), Postives = 69/103 (66.99%), Query Frame = 0
BLAST of HG10004387 vs. NCBI nr
Match: XP_023873319.1 (uncharacterized protein LOC111985907 [Quercus suber]) HSP 1 Score: 74.7 bits (182), Expect = 5.4e-10 Identity = 54/106 (50.94%), Postives = 72/106 (67.92%), Query Frame = 0
BLAST of HG10004387 vs. ExPASy TrEMBL
Match: A0A0A0KDQ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G367140 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 4.6e-31 Identity = 81/113 (71.68%), Postives = 90/113 (79.65%), Query Frame = 0
BLAST of HG10004387 vs. ExPASy TrEMBL
Match: A0A6A1V1J8 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR7G020458 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.9e-13 Identity = 52/98 (53.06%), Postives = 66/98 (67.35%), Query Frame = 0
BLAST of HG10004387 vs. ExPASy TrEMBL
Match: A0A2P5CTY4 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_273200 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 4.0e-11 Identity = 51/105 (48.57%), Postives = 67/105 (63.81%), Query Frame = 0
BLAST of HG10004387 vs. ExPASy TrEMBL
Match: A0A2P6R2B2 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0437411 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 4.4e-10 Identity = 47/103 (45.63%), Postives = 66/103 (64.08%), Query Frame = 0
BLAST of HG10004387 vs. ExPASy TrEMBL
Match: A0A2I4H8F7 (uncharacterized protein LOC109014412 OS=Juglans regia OX=51240 GN=LOC109014412 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 4.4e-10 Identity = 51/103 (49.51%), Postives = 69/103 (66.99%), Query Frame = 0
BLAST of HG10004387 vs. TAIR 10
Match: AT1G69050.1 (unknown protein; Has 9 Blast hits to 9 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 56.2 bits (134), Expect = 1.8e-08 Identity = 40/90 (44.44%), Postives = 48/90 (53.33%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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