HG10004345 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10004345
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	60S ribosomal protein L5-like
Location	Chr08: 16175213 .. 16177931 (-)
RNA-Seq Expression	HG10004345
Synteny	HG10004345

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAGTTTTTGCTTAAATCTCAAGGAATATTCTCTATATTTTCTAGCGTTATTGGAATTTTAGCATTCAGTGATCAGTGAAGATAATGGTACAGAACTTTCCGCATTGTCTACAATTTTTGTTTAATTCCATGAGGATCTGGATATTGCACTCGCCTTTACTTCGGCAATATCACTTACATTCAATTGATATTTGCTGTTGTTCAATTGAGTTGTTTTCTAAGATATTTTATAGCATTTTTGGGAATGATTGAACCAAGTGACTGCATTGTTTCCCTTAAGTTTGTTAACAATGTTCGTATCAGTATCATTCCAGCGATCAGACTAAATTTGATGATTATTTTTTTGCAGGCTTTCGCAAAAGCTCAAAAGACGAAAGCATACTTCAAACGGTACCAGGTTAAATTCAAGAGAAGAAGAGGTACTTCCCATTTCTGTTTGTTTATCCTCATGAATCATACTTGAAAAATTAATTGTCGGTTTCTGATAATACTCTCTCCTTCTGATAATGTACAGAGGGGAAGACTGATTATCGGGCCAGGATTCGCCTCATTAATCAAGACAAGAACAAGTACAATACTCCCAAATACCGCTTTGTTATTAGAATTGTATCCTCATACAGTTAGCTAAGTAGTGCCAGTGGTATTTTGTTTTATTTTCCAGTTGTTTCTTAATGAACTTGCAATGAGTGGTTTGGATCTTCCTTGCAAATTTCCCACCCTTTAATTTTTAATGTCACGGGTTTGCATGCTTGCCTCAACAATAAGAATTTCTGTATGGACACATCATTTAGTTAGTGTCATGACCATGATATGCATTGTGAGCGCTATGTCATACTGATTGATCTATTGATTTATGTTGCAAGCTGTGATAGACAGCCTTGTGATTTTCTGTGGTAATTCTATCCATCAAATCTATTAATATAGAATCAGTAATTCCTTTTATGATTCGTTAAGATTCCTGCAAGCACTAATTTTTCTGTAACAACTACCTTTGAATACATTTGATGTTACCGTTACTATCTATCATTACTTTTTTATGAGCATTTCTTGTTATGAATGGCGAGCTCTATTTATGTTCACTTGAGAAATGGGAACCTTAACGTTCATATCTAGACCAATAAGGATATTACAGCACAAGTAGTATCTTCTAGCATTGCTGGTGACTTGGTTCTTGCTGCCGCTTATTCTCATGAGCTGCCACATTATGGTCTTGAAGTTGGTCTAACAAATTATGCAGCAGGTACTACTTTTGCATTGTATGTCTCTTGGGGGCTGAGTTTTTTGATCTCTTGCTAACTTCTTATCCCTATCTTCATTTGTCTGGAATGGGTGCATGAAACCTGTTTAGCCTACTGTACTGGACTTCTATTGGCTCGCCGTGTCTTGAAGAAGCTTGAGATGGATGATGAGTACGAGGGTAATCTTGAGGTATTCTATCCACTTCCACCATCACCTTATAAAAATGCAAAATAGATTGAAGTACACATCTTCTATTAGGAATTACCCCTTCCATTAAAACTATTAACCACTGAAAGTGTTTGTATAATTAGGTTACTGGAGAGGATTTCTCCGTGGAACCCACAGATAGCCGAAGGCCTTTCAGAGCCCTCCTTGATGTAGGTCTAGTCCGAACAACAACAGGAAACCGTGTTTTTGGTGCCCTCAAGGTATATTTAGTTAGTCCATTTAAGATGAGCTGCAACATCTGTTTAATTTCTGCTGTTTAAAATAATTTAGATGGTTTGATGCATGTTACATGAGTGACTTTATTGATTCTTCAAACCATGGCTTGATGCAGAATGAGTGAATTATCTTGTTAAACCAATTTGCATGCATGTTTGCATGCTTATATTTCTGTATTTTGTTATCTCTAACCTCTGTTCAACGTTTGAGATTCAATGTCCATTATAACTTAGCTGCTTATTATAGTTATGGTGAGAAGTTTTTAAGTTCATTACAGTATCTGTTCACTGTGTAATTTGAAATATTACAAATTTACAATTGGGACAGTTTATCTAATATTTATCCACATTTCTCATAATGCAACTCTTGGTGTCTCTCTCACACCATTGTATTTTTGGAGACTTAAGCTATATGAACTTTCACGTCACACAGGGAGCTCTAGATGGTGGATTGGATGTTCCACACAGTGTCAAGAGGTTTGCTGGTTTTTCAAAGGACAGCAAGGAGCTCGACGCAGATGTTCATCGCAAATACATTTTTGGAGGCCACGTTGCTGCCTATATGCGGGTAAATGTTCCGGAATTTAATATGAGAGCATATAATTTAGAGTAGTCATTAGTTTATTCAGTCATGAAAATGTTCACTTTTGAGTTGTATTCCTTAGACGTTGATGGAGGATGAACCGGAGAAGTATCAATCTCAATTCAGCGATTACATCAAGAAAGGGATTGAGCCCGACAACATCGAGGAGTTGTTGAAGAAAGTTCATTCTGCAATCCGTGCAGAACCATTGGCAAAGACGACTGAGAAGCAACCACCAAAGAAGCACAAGAGGTTAATGTCGAAGCTCTATTTGTTTCTCATGATTGAACTAGCTTTTTAATTTCTGGTTTTCCATCCTTGTGCGGTTTTTCTCATAGGTATAACTTGAAGAAGCTCACATATGAAGAAAGGAAGGCCAAGTTGGTCGAGCGTTTGAATGCATTGAATTCTGCTGCTGGAGCAGACGACGATGAAGATGATGAAGAGTGA

mRNA sequence

ATGGCTTTCGCAAAAGCTCAAAAGACGAAAGCATACTTCAAACGGTACCAGGTTAAATTCAAGAGAAGAAGAGAGGGGAAGACTGATTATCGGGCCAGGATTCGCCTCATTAATCAAGACAAGAACAAGTACAATACTCCCAAATACCGCTTTGTTATTAGAATTACCAATAAGGATATTACAGCACAAGTAGTATCTTCTAGCATTGCTGGTGACTTGGTTCTTGCTGCCGCTTATTCTCATGAGCTGCCACATTATGGTCTTGAAGTTGGTCTAACAAATTATGCAGCAGCCTACTGTACTGGACTTCTATTGGCTCGCCGTGTCTTGAAGAAGCTTGAGATGGATGATGAGTACGAGGGTAATCTTGAGGGAGCTCTAGATGGTGGATTGGATGTTCCACACAGTGTCAAGAGGTTTGCTGGTTTTTCAAAGGACAGCAAGGAGCTCGACGCAGATGTTCATCGCAAATACATTTTTGGAGGCCACGTTGCTGCCTATATGCGGACGTTGATGGAGGATGAACCGGAGAAGTATCAATCTCAATTCAGCGATTACATCAAGAAAGGGATTGAGCCCGACAACATCGAGGAGTTGTTGAAGAAAGTTCATTCTGCAATCCGTGCAGAACCATTGGCAAAGACGACTGAGAAGCAACCACCAAAGAAGCACAAGAGGTATAACTTGAAGAAGCTCACATATGAAGAAAGGAAGGCCAAGTTGGTCGAGCGTTTGAATGCATTGAATTCTGCTGCTGGAGCAGACGACGATGAAGATGATGAAGAGTGA

Coding sequence (CDS)

ATGGCTTTCGCAAAAGCTCAAAAGACGAAAGCATACTTCAAACGGTACCAGGTTAAATTCAAGAGAAGAAGAGAGGGGAAGACTGATTATCGGGCCAGGATTCGCCTCATTAATCAAGACAAGAACAAGTACAATACTCCCAAATACCGCTTTGTTATTAGAATTACCAATAAGGATATTACAGCACAAGTAGTATCTTCTAGCATTGCTGGTGACTTGGTTCTTGCTGCCGCTTATTCTCATGAGCTGCCACATTATGGTCTTGAAGTTGGTCTAACAAATTATGCAGCAGCCTACTGTACTGGACTTCTATTGGCTCGCCGTGTCTTGAAGAAGCTTGAGATGGATGATGAGTACGAGGGTAATCTTGAGGGAGCTCTAGATGGTGGATTGGATGTTCCACACAGTGTCAAGAGGTTTGCTGGTTTTTCAAAGGACAGCAAGGAGCTCGACGCAGATGTTCATCGCAAATACATTTTTGGAGGCCACGTTGCTGCCTATATGCGGACGTTGATGGAGGATGAACCGGAGAAGTATCAATCTCAATTCAGCGATTACATCAAGAAAGGGATTGAGCCCGACAACATCGAGGAGTTGTTGAAGAAAGTTCATTCTGCAATCCGTGCAGAACCATTGGCAAAGACGACTGAGAAGCAACCACCAAAGAAGCACAAGAGGTATAACTTGAAGAAGCTCACATATGAAGAAAGGAAGGCCAAGTTGGTCGAGCGTTTGAATGCATTGAATTCTGCTGCTGGAGCAGACGACGATGAAGATGATGAAGAGTGA

Protein sequence

MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRITNKDITAQVVSSSIAGDLVLAAAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYEGNLEGALDGGLDVPHSVKRFAGFSKDSKELDADVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSDYIKKGIEPDNIEELLKKVHSAIRAEPLAKTTEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAGADDDEDDEE

Homology

[Close]

BLAST of HG10004345 vs. NCBI nr
Match: XP_038884001.1 (60S ribosomal protein L5-like [Benincasa hispida])

HSP 1 Score: 474.2 bits (1219), Expect = 7.4e-130
Identity = 253/301 (84.05%), Postives = 258/301 (85.71%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRITNKDI 60
           MAFAKAQKTKAYFKRYQVK+KRRREGKTDYRARIRLINQDKNKYNTPKYRFVIR TNKDI
Sbjct: 1   MAFAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRFTNKDI 60

Query: 61  TAQVVSSSIAGDLVLAAAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120
           TAQ+VSSSIAGD+VLAAAYSHELP YGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE
Sbjct: 61  TAQIVSSSIAGDMVLAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120

Query: 121 GNLE---------------------------------------GALDGGLDVPHSVKRFA 180
           GNLE                                       GALDGGLDVPH VKRFA
Sbjct: 121 GNLEVTGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDVPHGVKRFA 180

Query: 181 GFSKDSKELDADVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSDYIKKGIEPDNIEELLK 240
           GFSKDSKELDADVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSDYIKKGIEPDNIEELLK
Sbjct: 181 GFSKDSKELDADVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSDYIKKGIEPDNIEELLK 240

Query: 241 KVHSAIRAEPLAKTTEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAGADDDEDDE 263
           KVHSAIRAEPLAKTTE QPPKKHKRYNLKKLTYEERK+KLVERLNALNSAAGADD+EDDE
Sbjct: 241 KVHSAIRAEPLAKTTEIQPPKKHKRYNLKKLTYEERKSKLVERLNALNSAAGADDEEDDE 300

[Close]

BLAST of HG10004345 vs. NCBI nr
Match: XP_008445491.1 (PREDICTED: 60S ribosomal protein L5-like [Cucumis melo] >KAA0064740.1 60S ribosomal protein L5-like [Cucumis melo var. makuwa])

HSP 1 Score: 472.2 bits (1214), Expect = 2.8e-129
Identity = 251/301 (83.39%), Postives = 258/301 (85.71%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRITNKDI 60
           MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIR TNKDI
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRFTNKDI 60

Query: 61  TAQVVSSSIAGDLVLAAAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120
           TAQ+VSSSIAGD+VLA+AYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE
Sbjct: 61  TAQIVSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120

Query: 121 GNLE---------------------------------------GALDGGLDVPHSVKRFA 180
           GNLE                                       GALDGGLDVPHSVKRFA
Sbjct: 121 GNLEATGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDVPHSVKRFA 180

Query: 181 GFSKDSKELDADVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSDYIKKGIEPDNIEELLK 240
           GFSK + EL+ADVHRKYIFGGHVAAYMRTLMEDEPEKYQ+QFSDYIKKGIEPDNIEELLK
Sbjct: 181 GFSKGNNELNADVHRKYIFGGHVAAYMRTLMEDEPEKYQTQFSDYIKKGIEPDNIEELLK 240

Query: 241 KVHSAIRAEPLAKTTEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAGADDDEDDE 263
           KVHSAIRAEPLAKTTEKQPPK HKRYNLKKLTYE+RKAKLVERLNALNSAAGADDDEDDE
Sbjct: 241 KVHSAIRAEPLAKTTEKQPPKTHKRYNLKKLTYEQRKAKLVERLNALNSAAGADDDEDDE 300

[Close]

BLAST of HG10004345 vs. NCBI nr
Match: KAG6598618.1 (60S ribosomal protein L5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 469.2 bits (1206), Expect = 2.4e-128
Identity = 249/301 (82.72%), Postives = 258/301 (85.71%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRITNKDI 60
           MAFAKAQKTKAYFKRYQVK+KRRREGKTDYRARIRLINQDKNKYNTPKYRFVIR TNKDI
Sbjct: 1   MAFAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRFTNKDI 60

Query: 61  TAQVVSSSIAGDLVLAAAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120
           TAQVVSSSIAGD+VLAAAYSHELPHYGL+VGLTNYAAAYCTGLLLARRVLKKLEMDDEY 
Sbjct: 61  TAQVVSSSIAGDMVLAAAYSHELPHYGLDVGLTNYAAAYCTGLLLARRVLKKLEMDDEYV 120

Query: 121 GNLE---------------------------------------GALDGGLDVPHSVKRFA 180
           GNLE                                       GALDGGLDVPHSVKRFA
Sbjct: 121 GNLEVSGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDVPHSVKRFA 180

Query: 181 GFSKDSKELDADVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSDYIKKGIEPDNIEELLK 240
           GFSKDSKELDADVHRKYIFGGHVAAYMR+LMEDEPEKYQSQFSDYIKKGIEPDNIEELLK
Sbjct: 181 GFSKDSKELDADVHRKYIFGGHVAAYMRSLMEDEPEKYQSQFSDYIKKGIEPDNIEELLK 240

Query: 241 KVHSAIRAEPLAKTTEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAGADDDEDDE 263
           KVHSAIR EPLAKTT KQPPK+HKRYNLKKLTY+ER+AKLVERLNALNSAAGADDD+DD+
Sbjct: 241 KVHSAIRTEPLAKTTVKQPPKEHKRYNLKKLTYDERRAKLVERLNALNSAAGADDDDDDD 300

[Close]

BLAST of HG10004345 vs. NCBI nr
Match: XP_022961788.1 (60S ribosomal protein L5-like [Cucurbita moschata])

HSP 1 Score: 468.0 bits (1203), Expect = 5.3e-128
Identity = 249/301 (82.72%), Postives = 257/301 (85.38%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRITNKDI 60
           MAFAKAQKTKAYFKRYQVK+KRRREGKTDYRARIRLINQDKNKYNTPKYRFVIR TNKDI
Sbjct: 1   MAFAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRFTNKDI 60

Query: 61  TAQVVSSSIAGDLVLAAAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120
           TAQVVSSSIAGD+VLAAAYSHELPHYGL+VGLTNYAAAYCTGLLLARRVLKKLEMDDEY 
Sbjct: 61  TAQVVSSSIAGDMVLAAAYSHELPHYGLDVGLTNYAAAYCTGLLLARRVLKKLEMDDEYV 120

Query: 121 GNLE---------------------------------------GALDGGLDVPHSVKRFA 180
           GNLE                                       GALDGGLDVPHSVKRFA
Sbjct: 121 GNLEVSGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDVPHSVKRFA 180

Query: 181 GFSKDSKELDADVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSDYIKKGIEPDNIEELLK 240
           GFSKDSKELDADVHRKYIFGGHVAAYMR+LMEDEPEKYQSQFSDYIKKGIEPDNIEELLK
Sbjct: 181 GFSKDSKELDADVHRKYIFGGHVAAYMRSLMEDEPEKYQSQFSDYIKKGIEPDNIEELLK 240

Query: 241 KVHSAIRAEPLAKTTEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAGADDDEDDE 263
           KVHSAIR EPLAKTT KQPPK HKRYNLKKLTY+ER+AKLVERLNALNSAAGADDD+DD+
Sbjct: 241 KVHSAIRTEPLAKTTVKQPPKGHKRYNLKKLTYDERRAKLVERLNALNSAAGADDDDDDD 300

[Close]

BLAST of HG10004345 vs. NCBI nr
Match: XP_004144191.1 (60S ribosomal protein L5-like [Cucumis sativus] >KGN47624.1 hypothetical protein Csa_019024 [Cucumis sativus])

HSP 1 Score: 466.1 bits (1198), Expect = 2.0e-127
Identity = 247/301 (82.06%), Postives = 256/301 (85.05%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRITNKDI 60
           MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRITNKDI
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRITNKDI 60

Query: 61  TAQVVSSSIAGDLVLAAAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120
           TAQ+VSSSIAGD++LAAAYSHELP YGLEVGLTNYAAAYCTGLL+ARRVLKKLEMDDEYE
Sbjct: 61  TAQIVSSSIAGDMILAAAYSHELPRYGLEVGLTNYAAAYCTGLLVARRVLKKLEMDDEYE 120

Query: 121 GNLE---------------------------------------GALDGGLDVPHSVKRFA 180
           GNLE                                       GALDGGLDVPHSVKRFA
Sbjct: 121 GNLEATGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDVPHSVKRFA 180

Query: 181 GFSKDSKELDADVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSDYIKKGIEPDNIEELLK 240
           GFSK + EL+ADVHRKYIFGGHVAAYMRTLMEDEPEKYQ+QFSDYIKKGIEPDNIEELLK
Sbjct: 181 GFSKGNNELNADVHRKYIFGGHVAAYMRTLMEDEPEKYQTQFSDYIKKGIEPDNIEELLK 240

Query: 241 KVHSAIRAEPLAKTTEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAGADDDEDDE 263
           KVHSAIRAEPL KTTEKQPPK HKRYNLKKLTYE+RKAKLVERLNALNSAAG DDDEDD+
Sbjct: 241 KVHSAIRAEPLVKTTEKQPPKTHKRYNLKKLTYEQRKAKLVERLNALNSAAGVDDDEDDD 300

[Close]

BLAST of HG10004345 vs. ExPASy Swiss-Prot
Match: Q6UNT2 (60S ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=RPL5 PE=2 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 7.0e-115
Identity = 217/301 (72.09%), Postives = 243/301 (80.73%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRITNKDI 60
           MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFV+R +NKDI
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI 60

Query: 61  TAQVVSSSIAGDLVLAAAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120
           TAQ++S+SIAGDLVLA+AYSHELP YGLEVGLTNYAAAYCTGLLLARRVLK LEMD EYE
Sbjct: 61  TAQIISASIAGDLVLASAYSHELPQYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120

Query: 121 GNLE---------------------------------------GALDGGLDVPHSVKRFA 180
           GN+E                                       GALDGGLD+PHS KRFA
Sbjct: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GFSKDSKELDADVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSDYIKKGIEPDNIEELLK 240
           G++K+ ++LD +VHRKYIFGGHVAAYMRTLMEDEPEKYQS FS+YIKKGIE D +E L K
Sbjct: 181 GYAKNGQQLDVEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSEYIKKGIEADELEGLYK 240

Query: 241 KVHSAIRAEPLAKTTEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAGADDDEDDE 263
           KVH+AIRA P+AK ++K  PK HKRYNLKKLTY+ERKA+LVERLNALNSAA  DDD+D++
Sbjct: 241 KVHAAIRANPIAKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAADGDDDDDED 300

[Close]

BLAST of HG10004345 vs. ExPASy Swiss-Prot
Match: P49227 (60S ribosomal protein L5-2 OS=Arabidopsis thaliana OX=3702 GN=RPL5B PE=2 SV=3)

HSP 1 Score: 387.5 bits (994), Expect = 1.2e-106
Identity = 202/301 (67.11%), Postives = 231/301 (76.74%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRITNKDI 60
           M F K+ K+ AYFKRYQVKF+RRR+GKTDYRARIRLINQDKNKYNTPKYRFV+R TNKDI
Sbjct: 1   MVFVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60

Query: 61  TAQVVSSSIAGDLVLAAAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120
            AQ+VS+SIAGD+V A+AY+HELP YGL VGLTNYAAAYCTGLLLARRVLK LEMDDEYE
Sbjct: 61  VAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120

Query: 121 GNLE---------------------------------------GALDGGLDVPHSVKRFA 180
           GN+E                                       GALDGGLD+PHS KRFA
Sbjct: 121 GNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GFSKDSKELDADVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSDYIKKGIEPDNIEELLK 240
           GF K++K+LDA++HR YI+GGHV+ YM+ L EDEPEK Q+ FS YIKKG+E ++IEE+ K
Sbjct: 181 GFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEEMYK 240

Query: 241 KVHSAIRAEPLAKTTEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAGADDDEDDE 263
           KVH+AIRAEP  K TEK  PK+HKRYNLKKLTYEERK KL+ER+ ALN A G DDDEDDE
Sbjct: 241 KVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGAGGDDDDEDDE 300

[Close]

BLAST of HG10004345 vs. ExPASy Swiss-Prot
Match: Q8LBI1 (60S ribosomal protein L5-1 OS=Arabidopsis thaliana OX=3702 GN=RPL5A PE=1 SV=2)

HSP 1 Score: 384.0 bits (985), Expect = 1.3e-105
Identity = 201/301 (66.78%), Postives = 230/301 (76.41%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRITNKDI 60
           M F K+ K+ AYFKRYQVKF+RRR+GKTDYRARIRLINQDKNKYNTPKYRFV+R TNKDI
Sbjct: 1   MVFVKSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60

Query: 61  TAQVVSSSIAGDLVLAAAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120
            AQ+VS+SIAGD+V A+AY+HELP YGL VGLTNYAAAYCTGLLLARRVLK LEMDDEYE
Sbjct: 61  VAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120

Query: 121 GNLE---------------------------------------GALDGGLDVPHSVKRFA 180
           GN+E                                       GALDGGLD+PHS KRFA
Sbjct: 121 GNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GFSKDSKELDADVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSDYIKKGIEPDNIEELLK 240
           GF K++K+LDA++HR YI+GGHV+ YM+ L EDEPEK Q+ FS YIKKG+E ++IEEL K
Sbjct: 181 GFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEELYK 240

Query: 241 KVHSAIRAEPLAKTTEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAGADDDEDDE 263
           KVH+AIRA+P  K T K  PK+HKRYNLKKLTYEERK KL+ER+ ALN A G DDDEDDE
Sbjct: 241 KVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGAGGDDDDEDDE 300

[Close]

BLAST of HG10004345 vs. ExPASy Swiss-Prot
Match: A2WXX3 (60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica OX=39946 GN=RPL5A PE=3 SV=2)

HSP 1 Score: 379.8 bits (974), Expect = 2.5e-104
Identity = 195/299 (65.22%), Postives = 230/299 (76.92%), Query Frame = 0


Query: 3   FAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRITNKDITA 62
           F K QKT AY+KR+QVKFKRRR+GKTDYRARIRL NQDKNKYNTPKYRFV+R TNKDITA
Sbjct: 4   FVKTQKTNAYYKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITA 63

Query: 63  QVVSSSIAGDLVLAAAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYEGN 122
           Q+V ++IAGD+V+AAAYSHELP YGLEVGLTNYAAAYCTGLLLARRVLK   +D EYEGN
Sbjct: 64  QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGN 123

Query: 123 LE---------------------------------------GALDGGLDVPHSVKRFAGF 182
           +E                                       GALDGGLD+PHS KRFAGF
Sbjct: 124 IEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGF 183

Query: 183 SKDSKELDADVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSDYIKKGIEPDNIEELLKKV 242
            KD K+LD+D+HRKYI+GGHVA YMR++ E+EPEK+Q+ FS+Y+KKGI+ D +E L KKV
Sbjct: 184 KKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKV 243

Query: 243 HSAIRAEPLAKTTEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAGADDDEDDEE 263
           H+AIRA+P    + K+ P  HKRYNLKKLTYE+RKA LVERLNALNS+AGADDD+++E+
Sbjct: 244 HAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSSAGADDDDEEED 302

[Close]

BLAST of HG10004345 vs. ExPASy Swiss-Prot
Match: Q0JGY1 (60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL5A PE=2 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 7.3e-104
Identity = 195/299 (65.22%), Postives = 229/299 (76.59%), Query Frame = 0


Query: 3   FAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRITNKDITA 62
           F K QKT AY KR+QVKFKRRR+GKTDYRARIRL NQDKNKYNTPKYRFV+R TNKDITA
Sbjct: 4   FVKTQKTNAYHKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITA 63

Query: 63  QVVSSSIAGDLVLAAAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYEGN 122
           Q+V ++IAGD+V+AAAYSHELP YGLEVGLTNYAAAYCTGLLLARRVLK   +D EYEGN
Sbjct: 64  QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGN 123

Query: 123 LE---------------------------------------GALDGGLDVPHSVKRFAGF 182
           +E                                       GALDGGLD+PHS KRFAGF
Sbjct: 124 IEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGF 183

Query: 183 SKDSKELDADVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSDYIKKGIEPDNIEELLKKV 242
            KD K+LD+D+HRKYI+GGHVA YMR++ E+EPEK+Q+ FS+Y+KKGI+ D +E L KKV
Sbjct: 184 KKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKV 243

Query: 243 HSAIRAEPLAKTTEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAGADDDEDDEE 263
           H+AIRA+P    + K+ P  HKRYNLKKLTYE+RKA LVERLNALNS+AGADDD+++E+
Sbjct: 244 HAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSSAGADDDDEEED 302

[Close]

BLAST of HG10004345 vs. ExPASy TrEMBL
Match: A0A5A7VC42 (60S ribosomal protein L5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00440 PE=3 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.4e-129
Identity = 251/301 (83.39%), Postives = 258/301 (85.71%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRITNKDI 60
           MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIR TNKDI
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRFTNKDI 60

Query: 61  TAQVVSSSIAGDLVLAAAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120
           TAQ+VSSSIAGD+VLA+AYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE
Sbjct: 61  TAQIVSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120

Query: 121 GNLE---------------------------------------GALDGGLDVPHSVKRFA 180
           GNLE                                       GALDGGLDVPHSVKRFA
Sbjct: 121 GNLEATGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDVPHSVKRFA 180

Query: 181 GFSKDSKELDADVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSDYIKKGIEPDNIEELLK 240
           GFSK + EL+ADVHRKYIFGGHVAAYMRTLMEDEPEKYQ+QFSDYIKKGIEPDNIEELLK
Sbjct: 181 GFSKGNNELNADVHRKYIFGGHVAAYMRTLMEDEPEKYQTQFSDYIKKGIEPDNIEELLK 240

Query: 241 KVHSAIRAEPLAKTTEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAGADDDEDDE 263
           KVHSAIRAEPLAKTTEKQPPK HKRYNLKKLTYE+RKAKLVERLNALNSAAGADDDEDDE
Sbjct: 241 KVHSAIRAEPLAKTTEKQPPKTHKRYNLKKLTYEQRKAKLVERLNALNSAAGADDDEDDE 300

[Close]

BLAST of HG10004345 vs. ExPASy TrEMBL
Match: A0A1S3BCD6 (60S ribosomal protein L5-like OS=Cucumis melo OX=3656 GN=LOC103488491 PE=3 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.4e-129
Identity = 251/301 (83.39%), Postives = 258/301 (85.71%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRITNKDI 60
           MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIR TNKDI
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRFTNKDI 60

Query: 61  TAQVVSSSIAGDLVLAAAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120
           TAQ+VSSSIAGD+VLA+AYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE
Sbjct: 61  TAQIVSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120

Query: 121 GNLE---------------------------------------GALDGGLDVPHSVKRFA 180
           GNLE                                       GALDGGLDVPHSVKRFA
Sbjct: 121 GNLEATGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDVPHSVKRFA 180

Query: 181 GFSKDSKELDADVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSDYIKKGIEPDNIEELLK 240
           GFSK + EL+ADVHRKYIFGGHVAAYMRTLMEDEPEKYQ+QFSDYIKKGIEPDNIEELLK
Sbjct: 181 GFSKGNNELNADVHRKYIFGGHVAAYMRTLMEDEPEKYQTQFSDYIKKGIEPDNIEELLK 240

Query: 241 KVHSAIRAEPLAKTTEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAGADDDEDDE 263
           KVHSAIRAEPLAKTTEKQPPK HKRYNLKKLTYE+RKAKLVERLNALNSAAGADDDEDDE
Sbjct: 241 KVHSAIRAEPLAKTTEKQPPKTHKRYNLKKLTYEQRKAKLVERLNALNSAAGADDDEDDE 300

[Close]

BLAST of HG10004345 vs. ExPASy TrEMBL
Match: A0A6J1HCU2 (60S ribosomal protein L5-like OS=Cucurbita moschata OX=3662 GN=LOC111462450 PE=3 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 2.6e-128
Identity = 249/301 (82.72%), Postives = 257/301 (85.38%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRITNKDI 60
           MAFAKAQKTKAYFKRYQVK+KRRREGKTDYRARIRLINQDKNKYNTPKYRFVIR TNKDI
Sbjct: 1   MAFAKAQKTKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRFTNKDI 60

Query: 61  TAQVVSSSIAGDLVLAAAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120
           TAQVVSSSIAGD+VLAAAYSHELPHYGL+VGLTNYAAAYCTGLLLARRVLKKLEMDDEY 
Sbjct: 61  TAQVVSSSIAGDMVLAAAYSHELPHYGLDVGLTNYAAAYCTGLLLARRVLKKLEMDDEYV 120

Query: 121 GNLE---------------------------------------GALDGGLDVPHSVKRFA 180
           GNLE                                       GALDGGLDVPHSVKRFA
Sbjct: 121 GNLEVSGEDFSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDVPHSVKRFA 180

Query: 181 GFSKDSKELDADVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSDYIKKGIEPDNIEELLK 240
           GFSKDSKELDADVHRKYIFGGHVAAYMR+LMEDEPEKYQSQFSDYIKKGIEPDNIEELLK
Sbjct: 181 GFSKDSKELDADVHRKYIFGGHVAAYMRSLMEDEPEKYQSQFSDYIKKGIEPDNIEELLK 240

Query: 241 KVHSAIRAEPLAKTTEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAGADDDEDDE 263
           KVHSAIR EPLAKTT KQPPK HKRYNLKKLTY+ER+AKLVERLNALNSAAGADDD+DD+
Sbjct: 241 KVHSAIRTEPLAKTTVKQPPKGHKRYNLKKLTYDERRAKLVERLNALNSAAGADDDDDDD 300

[Close]

BLAST of HG10004345 vs. ExPASy TrEMBL
Match: A0A0A0KFL3 (Ribosomal_L18_c domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G365730 PE=3 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 9.8e-128
Identity = 247/301 (82.06%), Postives = 256/301 (85.05%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRITNKDI 60
           MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRITNKDI
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRITNKDI 60

Query: 61  TAQVVSSSIAGDLVLAAAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120
           TAQ+VSSSIAGD++LAAAYSHELP YGLEVGLTNYAAAYCTGLL+ARRVLKKLEMDDEYE
Sbjct: 61  TAQIVSSSIAGDMILAAAYSHELPRYGLEVGLTNYAAAYCTGLLVARRVLKKLEMDDEYE 120

Query: 121 GNLE---------------------------------------GALDGGLDVPHSVKRFA 180
           GNLE                                       GALDGGLDVPHSVKRFA
Sbjct: 121 GNLEATGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDVPHSVKRFA 180

Query: 181 GFSKDSKELDADVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSDYIKKGIEPDNIEELLK 240
           GFSK + EL+ADVHRKYIFGGHVAAYMRTLMEDEPEKYQ+QFSDYIKKGIEPDNIEELLK
Sbjct: 181 GFSKGNNELNADVHRKYIFGGHVAAYMRTLMEDEPEKYQTQFSDYIKKGIEPDNIEELLK 240

Query: 241 KVHSAIRAEPLAKTTEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAGADDDEDDE 263
           KVHSAIRAEPL KTTEKQPPK HKRYNLKKLTYE+RKAKLVERLNALNSAAG DDDEDD+
Sbjct: 241 KVHSAIRAEPLVKTTEKQPPKTHKRYNLKKLTYEQRKAKLVERLNALNSAAGVDDDEDDD 300

[Close]

BLAST of HG10004345 vs. ExPASy TrEMBL
Match: A0A6J1GH83 (60S ribosomal protein L5-like OS=Cucurbita moschata OX=3662 GN=LOC111454170 PE=3 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.7e-127
Identity = 246/301 (81.73%), Postives = 257/301 (85.38%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRITNKDI 60
           MAFAKAQKTKAYFKRYQVKF+RRR+GKTDYRARIRLINQDKNKYNTPKYRFVIR +NKDI
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFSNKDI 60

Query: 61  TAQVVSSSIAGDLVLAAAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120
           TAQ++SSSIAGD+VLA+AYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE
Sbjct: 61  TAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120

Query: 121 GNLE---------------------------------------GALDGGLDVPHSVKRFA 180
           GNLE                                       GALDGGLDVPHSVKRFA
Sbjct: 121 GNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDVPHSVKRFA 180

Query: 181 GFSKDSKELDADVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSDYIKKGIEPDNIEELLK 240
           GFSKDSKELDA+VHRKYIFGGHVAAYMRTLMEDEPEKYQSQFS+YIKKGI+ DNIEELLK
Sbjct: 181 GFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGIDADNIEELLK 240

Query: 241 KVHSAIRAEPLAKTTEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAGADDDEDDE 263
           KVHSAIR+EPL K  EKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAGADDDEDDE
Sbjct: 241 KVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAGADDDEDDE 300

[Close]

BLAST of HG10004345 vs. TAIR 10
Match: AT5G39740.1 (ribosomal protein L5 B )

HSP 1 Score: 387.5 bits (994), Expect = 8.5e-108
Identity = 202/301 (67.11%), Postives = 231/301 (76.74%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRITNKDI 60
           M F K+ K+ AYFKRYQVKF+RRR+GKTDYRARIRLINQDKNKYNTPKYRFV+R TNKDI
Sbjct: 1   MVFVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60

Query: 61  TAQVVSSSIAGDLVLAAAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120
            AQ+VS+SIAGD+V A+AY+HELP YGL VGLTNYAAAYCTGLLLARRVLK LEMDDEYE
Sbjct: 61  VAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120

Query: 121 GNLE---------------------------------------GALDGGLDVPHSVKRFA 180
           GN+E                                       GALDGGLD+PHS KRFA
Sbjct: 121 GNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GFSKDSKELDADVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSDYIKKGIEPDNIEELLK 240
           GF K++K+LDA++HR YI+GGHV+ YM+ L EDEPEK Q+ FS YIKKG+E ++IEE+ K
Sbjct: 181 GFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEEMYK 240

Query: 241 KVHSAIRAEPLAKTTEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAGADDDEDDE 263
           KVH+AIRAEP  K TEK  PK+HKRYNLKKLTYEERK KL+ER+ ALN A G DDDEDDE
Sbjct: 241 KVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGAGGDDDDEDDE 300

[Close]

BLAST of HG10004345 vs. TAIR 10
Match: AT5G39740.2 (ribosomal protein L5 B )

HSP 1 Score: 387.5 bits (994), Expect = 8.5e-108
Identity = 202/301 (67.11%), Postives = 231/301 (76.74%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRITNKDI 60
           M F K+ K+ AYFKRYQVKF+RRR+GKTDYRARIRLINQDKNKYNTPKYRFV+R TNKDI
Sbjct: 1   MVFVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60

Query: 61  TAQVVSSSIAGDLVLAAAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120
            AQ+VS+SIAGD+V A+AY+HELP YGL VGLTNYAAAYCTGLLLARRVLK LEMDDEYE
Sbjct: 61  VAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120

Query: 121 GNLE---------------------------------------GALDGGLDVPHSVKRFA 180
           GN+E                                       GALDGGLD+PHS KRFA
Sbjct: 121 GNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GFSKDSKELDADVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSDYIKKGIEPDNIEELLK 240
           GF K++K+LDA++HR YI+GGHV+ YM+ L EDEPEK Q+ FS YIKKG+E ++IEE+ K
Sbjct: 181 GFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEEMYK 240

Query: 241 KVHSAIRAEPLAKTTEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAGADDDEDDE 263
           KVH+AIRAEP  K TEK  PK+HKRYNLKKLTYEERK KL+ER+ ALN A G DDDEDDE
Sbjct: 241 KVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGAGGDDDDEDDE 300

[Close]

BLAST of HG10004345 vs. TAIR 10
Match: AT3G25520.1 (ribosomal protein L5 )

HSP 1 Score: 384.0 bits (985), Expect = 9.4e-107
Identity = 201/301 (66.78%), Postives = 230/301 (76.41%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRITNKDI 60
           M F K+ K+ AYFKRYQVKF+RRR+GKTDYRARIRLINQDKNKYNTPKYRFV+R TNKDI
Sbjct: 1   MVFVKSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60

Query: 61  TAQVVSSSIAGDLVLAAAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120
            AQ+VS+SIAGD+V A+AY+HELP YGL VGLTNYAAAYCTGLLLARRVLK LEMDDEYE
Sbjct: 61  VAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120

Query: 121 GNLE---------------------------------------GALDGGLDVPHSVKRFA 180
           GN+E                                       GALDGGLD+PHS KRFA
Sbjct: 121 GNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GFSKDSKELDADVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSDYIKKGIEPDNIEELLK 240
           GF K++K+LDA++HR YI+GGHV+ YM+ L EDEPEK Q+ FS YIKKG+E ++IEEL K
Sbjct: 181 GFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEELYK 240

Query: 241 KVHSAIRAEPLAKTTEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAGADDDEDDE 263
           KVH+AIRA+P  K T K  PK+HKRYNLKKLTYEERK KL+ER+ ALN A G DDDEDDE
Sbjct: 241 KVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGAGGDDDDEDDE 300

[Close]

BLAST of HG10004345 vs. TAIR 10
Match: AT3G25520.2 (ribosomal protein L5 )

HSP 1 Score: 203.4 bits (516), Expect = 2.3e-52
Identity = 109/189 (57.67%), Postives = 128/189 (67.72%), Query Frame = 0


Query: 113 LEMDDEYEGNLE---------------------------------------GALDGGLDV 172
           LEMDDEYEGN+E                                       GALDGGLD+
Sbjct: 2   LEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDI 61

Query: 173 PHSVKRFAGFSKDSKELDADVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSDYIKKGIEP 232
           PHS KRFAGF K++K+LDA++HR YI+GGHV+ YM+ L EDEPEK Q+ FS YIKKG+E 
Sbjct: 62  PHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEA 121

Query: 233 DNIEELLKKVHSAIRAEPLAKTTEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAG 263
           ++IEEL KKVH+AIRA+P  K T K  PK+HKRYNLKKLTYEERK KL+ER+ ALN A G
Sbjct: 122 ESIEELYKKVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGAGG 181

The following BLAST results are available for this feature:

BLAST of HG10004345 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884001.1	7.4e-130	84.05	60S ribosomal protein L5-like [Benincasa hispida]	[more]
XP_008445491.1	2.8e-129	83.39	PREDICTED: 60S ribosomal protein L5-like [Cucumis melo] >KAA0064740.1 60S riboso...	[more]
KAG6598618.1	2.4e-128	82.72	60S ribosomal protein L5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022961788.1	5.3e-128	82.72	60S ribosomal protein L5-like [Cucurbita moschata]	[more]
XP_004144191.1	2.0e-127	82.06	60S ribosomal protein L5-like [Cucumis sativus] >KGN47624.1 hypothetical protein...	[more]

BLAST of HG10004345 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6UNT2	7.0e-115	72.09	60S ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=RPL5 PE=2 SV=1	[more]
P49227	1.2e-106	67.11	60S ribosomal protein L5-2 OS=Arabidopsis thaliana OX=3702 GN=RPL5B PE=2 SV=3	[more]
Q8LBI1	1.3e-105	66.78	60S ribosomal protein L5-1 OS=Arabidopsis thaliana OX=3702 GN=RPL5A PE=1 SV=2	[more]
A2WXX3	2.5e-104	65.22	60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica OX=39946 GN=RPL5A PE=3 ...	[more]
Q0JGY1	7.3e-104	65.22	60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL5A PE=...	[more]

BLAST of HG10004345 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VC42	1.4e-129	83.39	60S ribosomal protein L5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3BCD6	1.4e-129	83.39	60S ribosomal protein L5-like OS=Cucumis melo OX=3656 GN=LOC103488491 PE=3 SV=1	[more]
A0A6J1HCU2	2.6e-128	82.72	60S ribosomal protein L5-like OS=Cucurbita moschata OX=3662 GN=LOC111462450 PE=3...	[more]
A0A0A0KFL3	9.8e-128	82.06	Ribosomal_L18_c domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G36...	[more]
A0A6J1GH83	1.7e-127	81.73	60S ribosomal protein L5-like OS=Cucurbita moschata OX=3662 GN=LOC111454170 PE=3...	[more]

BLAST of HG10004345 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39740.1	8.5e-108	67.11	ribosomal protein L5 B	[more]
AT5G39740.2	8.5e-108	67.11	ribosomal protein L5 B	[more]
AT3G25520.1	9.4e-107	66.78	ribosomal protein L5	[more]
AT3G25520.2	2.3e-52	57.67	ribosomal protein L5	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 231..251
None	No IPR available	GENE3D	3.30.420.100		coord: 1..122 e-value: 8.4E-64 score: 217.9 coord: 123..252 e-value: 1.2E-53 score: 184.6
None	No IPR available	PANTHER	PTHR23410:SF28	SUBFAMILY NOT NAMED	coord: 1..124 coord: 121..260
None	No IPR available	CDD	cd00432	Ribosomal_L18_L5e	coord: 41..141 e-value: 5.43696E-21 score: 82.9731
None	No IPR available	SUPERFAMILY	53137	Translational machinery components	coord: 11..212
IPR005485	Ribosomal protein L5 eukaryotic/L18 archaeal	PRINTS	PR00058	RIBOSOMALL5	coord: 43..62 score: 66.56 coord: 84..104 score: 80.95 coord: 20..39 score: 76.25
IPR005485	Ribosomal protein L5 eukaryotic/L18 archaeal	PFAM	PF17144	Ribosomal_L5e	coord: 14..123 e-value: 8.0E-56 score: 188.6
IPR005485	Ribosomal protein L5 eukaryotic/L18 archaeal	PANTHER	PTHR23410	RIBOSOMAL PROTEIN L5-RELATED	coord: 1..124 coord: 121..260
IPR005485	Ribosomal protein L5 eukaryotic/L18 archaeal	HAMAP	MF_01337_A	Ribosomal_L18_A	coord: 14..207 score: 19.874109
IPR025607	Ribosomal protein L5 eukaryotic/L18 archaeal, C-terminal	PFAM	PF14204	Ribosomal_L18_c	coord: 152..242 e-value: 6.4E-35 score: 120.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10004345.1	HG10004345.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016311	dephosphorylation
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome
molecular_function	GO:0008097	5S rRNA binding
molecular_function	GO:0016791	phosphatase activity
molecular_function	GO:0003735	structural constituent of ribosome