HG10004303 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10004303
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Damaged dna-binding 2, putative isoform 1
Location	Chr08: 15798593 .. 15799467 (+)
RNA-Seq Expression	HG10004303
Synteny	HG10004303

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAATTGCTTTGGAAAGTAATAGCAGGATTCCGCCGTCTGTTTTCTCGCAAGGTGGCTTGCCGTCGTACTGCTCCGTCTTGAATACGACGGGGATTATTCCGGTAGTTCGGCGAGAGGCGGCCGTTGGTGATGCGGTGGCGCCGGCAGAGGTGGATAGATGTAGTTCGTCTTCATCGTCGTCGATCGGAGAAAACAGTGGTTTCTCTGTTCGATCGTTGGATAATGACGATGGAGAGGATAATGAGGCGGAAAGTTCGTATAAAGGACCTCTAGGAATGGAATCTTTGGAAGAAGTTTTGCCTATCAGGTTAGCGATTGTGATTTGTTTTTTTTTTTTGTTCTTCGTAATCTTCTTCTTCTCCATGGTTTCTAAATCTAGGGCAACTTGATCTTGATCCATCGCCTTTCGATTTCGTTTCTGAAGGTTTTAATTACGAGATTCAGTTGAATTTTAACAAATTATATCACCTTGTGAATGTTATGCAGGAGAGGAATTTCAAATTTCTACAACGGAAAATCGAAATCCTTCACAAGCTTGGCAGACGCTTCCTCTTCTTCCATTAAAGACATAGCAAAGCCTGAAAACGCCTTCTCTCGGAAACGGAGAAATCTTCTTGCATCTAATCTCATCGCCGGCGGCATATCAAAGCGACCGATTATTAGGTCAAGTCGAAGCTCGTTAGCGTTGGCCGTCGTCCTGAGCAGTTCTGAAAGCCACAACAATGACGATCCGAACTCGAGATTGCCTCTGCCGATTCGTCCTCCATTGCACCCCAACGGACGAGCATCTCGCAGCAATTCAGGTTCAACAGTTCCTCTTCTCTGTAAATTCCCCACTTGGCGATCATACTCCTTGGCCAATATACAGTAG

mRNA sequence

ATGTCAATTGCTTTGGAAAGTAATAGCAGGATTCCGCCGTCTGTTTTCTCGCAAGGTGGCTTGCCGTCGTACTGCTCCGTCTTGAATACGACGGGGATTATTCCGGTAGTTCGGCGAGAGGCGGCCGTTGGTGATGCGGTGGCGCCGGCAGAGGTGGATAGATGTAGTTCGTCTTCATCGTCGTCGATCGGAGAAAACAGTGGTTTCTCTGTTCGATCGTTGGATAATGACGATGGAGAGGATAATGAGGCGGAAAGTTCGTATAAAGGACCTCTAGGAATGGAATCTTTGGAAGAAGTTTTGCCTATCAGGAGAGGAATTTCAAATTTCTACAACGGAAAATCGAAATCCTTCACAAGCTTGGCAGACGCTTCCTCTTCTTCCATTAAAGACATAGCAAAGCCTGAAAACGCCTTCTCTCGGAAACGGAGAAATCTTCTTGCATCTAATCTCATCGCCGGCGGCATATCAAAGCGACCGATTATTAGGTCAAGTCGAAGCTCGTTAGCGTTGGCCGTCGTCCTGAGCAGTTCTGAAAGCCACAACAATGACGATCCGAACTCGAGATTGCCTCTGCCGATTCGTCCTCCATTGCACCCCAACGGACGAGCATCTCGCAGCAATTCAGGTTCAACAGTTCCTCTTCTCTGTAAATTCCCCACTTGGCGATCATACTCCTTGGCCAATATACAGTAG

Coding sequence (CDS)

ATGTCAATTGCTTTGGAAAGTAATAGCAGGATTCCGCCGTCTGTTTTCTCGCAAGGTGGCTTGCCGTCGTACTGCTCCGTCTTGAATACGACGGGGATTATTCCGGTAGTTCGGCGAGAGGCGGCCGTTGGTGATGCGGTGGCGCCGGCAGAGGTGGATAGATGTAGTTCGTCTTCATCGTCGTCGATCGGAGAAAACAGTGGTTTCTCTGTTCGATCGTTGGATAATGACGATGGAGAGGATAATGAGGCGGAAAGTTCGTATAAAGGACCTCTAGGAATGGAATCTTTGGAAGAAGTTTTGCCTATCAGGAGAGGAATTTCAAATTTCTACAACGGAAAATCGAAATCCTTCACAAGCTTGGCAGACGCTTCCTCTTCTTCCATTAAAGACATAGCAAAGCCTGAAAACGCCTTCTCTCGGAAACGGAGAAATCTTCTTGCATCTAATCTCATCGCCGGCGGCATATCAAAGCGACCGATTATTAGGTCAAGTCGAAGCTCGTTAGCGTTGGCCGTCGTCCTGAGCAGTTCTGAAAGCCACAACAATGACGATCCGAACTCGAGATTGCCTCTGCCGATTCGTCCTCCATTGCACCCCAACGGACGAGCATCTCGCAGCAATTCAGGTTCAACAGTTCCTCTTCTCTGTAAATTCCCCACTTGGCGATCATACTCCTTGGCCAATATACAGTAG

Protein sequence

MSIALESNSRIPPSVFSQGGLPSYCSVLNTTGIIPVVRREAAVGDAVAPAEVDRCSSSSSSSIGENSGFSVRSLDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTSLADASSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIIRSSRSSLALAVVLSSSESHNNDDPNSRLPLPIRPPLHPNGRASRSNSGSTVPLLCKFPTWRSYSLANIQ

Homology

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BLAST of HG10004303 vs. NCBI nr
Match: KAA0064705.1 (Damaged dna-binding 2, putative isoform 1 [Cucumis melo var. makuwa] >TYK00723.1 Damaged dna-binding 2, putative isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 390.2 bits (1001), Expect = 1.2e-104
Identity = 211/234 (90.17%), Postives = 218/234 (93.16%), Query Frame = 0


Query: 1   MSIALESNSRIPPSVFSQGGLPSYCSVLNTTGIIPVVRREAAVGDAVAPAEVDRCSSSSS 60
           MSIALESN+RIPPSVFSQ GLP YCSVLNTTGIIPVVRREAAV DAVAP +VDRCSSSSS
Sbjct: 1   MSIALESNTRIPPSVFSQAGLPPYCSVLNTTGIIPVVRREAAVADAVAPEDVDRCSSSSS 60

Query: 61  SSIGENSGFSVRSLDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 120
           SSIGENSGFSVRS DNDDGEDNEAESSY+GPLGMESLEEVLPIRRGISNFYNGKSKSFTS
Sbjct: 61  SSIGENSGFSVRSSDNDDGEDNEAESSYRGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 120

Query: 121 LADA-SSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIIRSSRSSLALAVVLSSSE 180
           LADA SSSSIK+IAKPENAFSRKRRNLLASNLIAGGISKRPII SSRSSLALAVVLSSSE
Sbjct: 121 LADASSSSSIKEIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 180

Query: 181 SHNNDDPNSRL--PLPIRPPLHPNGRASRSNSGSTVPLLCKFPTWRSYSLANIQ 232
           SH N+D NS +  P PIRPPLHPNGRASR NSGS VP LCKFPTWRSYS+ANIQ
Sbjct: 181 SHKNNDLNSIIPPPTPIRPPLHPNGRASRINSGSAVPSLCKFPTWRSYSMANIQ 234

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BLAST of HG10004303 vs. NCBI nr
Match: XP_008445543.1 (PREDICTED: uncharacterized protein LOC103488525 [Cucumis melo])

HSP 1 Score: 390.2 bits (1001), Expect = 1.2e-104
Identity = 211/234 (90.17%), Postives = 218/234 (93.16%), Query Frame = 0


Query: 1   MSIALESNSRIPPSVFSQGGLPSYCSVLNTTGIIPVVRREAAVGDAVAPAEVDRCSSSSS 60
           MSIALESN+RIPPSVFSQ GLP YCSVLNTTGIIPVVRREAAV DAVAP +VDRCSSSSS
Sbjct: 36  MSIALESNTRIPPSVFSQAGLPPYCSVLNTTGIIPVVRREAAVADAVAPEDVDRCSSSSS 95

Query: 61  SSIGENSGFSVRSLDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 120
           SSIGENSGFSVRS DNDDGEDNEAESSY+GPLGMESLEEVLPIRRGISNFYNGKSKSFTS
Sbjct: 96  SSIGENSGFSVRSSDNDDGEDNEAESSYRGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 155

Query: 121 LADA-SSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIIRSSRSSLALAVVLSSSE 180
           LADA SSSSIK+IAKPENAFSRKRRNLLASNLIAGGISKRPII SSRSSLALAVVLSSSE
Sbjct: 156 LADASSSSSIKEIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 215

Query: 181 SHNNDDPNSRL--PLPIRPPLHPNGRASRSNSGSTVPLLCKFPTWRSYSLANIQ 232
           SH N+D NS +  P PIRPPLHPNGRASR NSGS VP LCKFPTWRSYS+ANIQ
Sbjct: 216 SHKNNDLNSIIPPPTPIRPPLHPNGRASRINSGSAVPSLCKFPTWRSYSMANIQ 269

[Close]

BLAST of HG10004303 vs. NCBI nr
Match: XP_038883984.1 (uncharacterized protein LOC120074946 [Benincasa hispida])

HSP 1 Score: 389.8 bits (1000), Expect = 1.6e-104
Identity = 216/233 (92.70%), Postives = 221/233 (94.85%), Query Frame = 0


Query: 1   MSIALESNSRIPPSVFSQGGLPSYCSVLNTTGIIPVVRRE-AAVGDAVAPAEVDRCSSSS 60
           MSIALESNSRIPPSVFSQ GLPSYCSVLNTTG IPVVR+E AAVGDAVA AEVD CSSSS
Sbjct: 1   MSIALESNSRIPPSVFSQSGLPSYCSVLNTTGRIPVVRQEAAAVGDAVA-AEVDGCSSSS 60

Query: 61  SSSIGENSGFSVRSLDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFT 120
           SSSIGENSGFSVRS DND+GEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFT
Sbjct: 61  SSSIGENSGFSVRSSDNDNGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFT 120

Query: 121 SLADA-SSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIIRSSRSSLALAVVLSSS 180
           SLADA SSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPII SSRSSLALAVVLSSS
Sbjct: 121 SLADASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIINSSRSSLALAVVLSSS 180

Query: 181 ESHNNDDPNSRLPLPIRPPLHPNGRASRSNSGSTVPLLCKFPTWRSYSLANIQ 232
           ESHN++D NSRL  PIRPPLHPNGRASRSNSGS VPLLCKFP+WRSYSLANIQ
Sbjct: 181 ESHNSNDLNSRLSPPIRPPLHPNGRASRSNSGSPVPLLCKFPSWRSYSLANIQ 232

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BLAST of HG10004303 vs. NCBI nr
Match: XP_022962518.1 (uncharacterized protein LOC111462922 [Cucurbita moschata] >KAG6598596.1 hypothetical protein SDJN03_08374, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029529.1 hypothetical protein SDJN02_07868 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 370.2 bits (949), Expect = 1.3e-98
Identity = 204/233 (87.55%), Postives = 211/233 (90.56%), Query Frame = 0


Query: 1   MSIALESNSRIPPSVFSQGGLPSYCSVLNTTGIIPVVRREAAVGDAVAPAE-VDRCSSSS 60
           MSIALESNSRIPPSVFSQG LPSYCSVLNTTG+IPVVRREA VGD VAPAE VDRCSSSS
Sbjct: 1   MSIALESNSRIPPSVFSQGVLPSYCSVLNTTGVIPVVRREAVVGDVVAPAEVVDRCSSSS 60

Query: 61  SSSIGENSGFSVRSLDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFT 120
           SSSIGENS FSVRS+++DDGEDNEAESSYK  LGMESLEEVLPIRRGISNFYNGKSKSFT
Sbjct: 61  SSSIGENSDFSVRSVNDDDGEDNEAESSYKESLGMESLEEVLPIRRGISNFYNGKSKSFT 120

Query: 121 SLADASS-SSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIIRSSRSSLALAVVLSSS 180
           SL DASS SSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPII S  SSLALAV +SSS
Sbjct: 121 SLGDASSTSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSRGSSLALAVFMSSS 180

Query: 181 ESHNNDDPNSRLPLPIRPPLHPNGRASRSNSGSTVPLLCKFPTWRSYSLANIQ 232
           E  + +D NSRL   IRPPLHP GRASRSNSGS VPLLCKFPTWRSYSLANIQ
Sbjct: 181 ERQSGEDLNSRLSPTIRPPLHPKGRASRSNSGSAVPLLCKFPTWRSYSLANIQ 233

[Close]

BLAST of HG10004303 vs. NCBI nr
Match: XP_023547301.1 (uncharacterized protein LOC111806162 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 369.0 bits (946), Expect = 3.0e-98
Identity = 203/233 (87.12%), Postives = 211/233 (90.56%), Query Frame = 0


Query: 1   MSIALESNSRIPPSVFSQGGLPSYCSVLNTTGIIPVVRREAAVGDAVAPAE-VDRCSSSS 60
           MSIALESNSRIPPSVFSQG LPSYCSVLNTTG+IPVVRR+A VGD VAPAE VDRCSSSS
Sbjct: 1   MSIALESNSRIPPSVFSQGVLPSYCSVLNTTGVIPVVRRDAVVGDVVAPAEVVDRCSSSS 60

Query: 61  SSSIGENSGFSVRSLDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFT 120
           SSSIGENS FSVRS+++DDGEDNEAESSYK  LGMESLEEVLPIRRGISNFYNGKSKSFT
Sbjct: 61  SSSIGENSDFSVRSVNDDDGEDNEAESSYKESLGMESLEEVLPIRRGISNFYNGKSKSFT 120

Query: 121 SLADASS-SSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIIRSSRSSLALAVVLSSS 180
           SL DASS SSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPII S  SSLALAV +SSS
Sbjct: 121 SLGDASSTSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSRGSSLALAVFMSSS 180

Query: 181 ESHNNDDPNSRLPLPIRPPLHPNGRASRSNSGSTVPLLCKFPTWRSYSLANIQ 232
           E  + +D NSRL   IRPPLHP GRASRSNSGS VPLLCKFPTWRSYSLANIQ
Sbjct: 181 ERQSGEDLNSRLSPTIRPPLHPKGRASRSNSGSAVPLLCKFPTWRSYSLANIQ 233

[Close]

BLAST of HG10004303 vs. ExPASy TrEMBL
Match: A0A5A7VFP0 (Damaged dna-binding 2, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00100 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 6.0e-105
Identity = 211/234 (90.17%), Postives = 218/234 (93.16%), Query Frame = 0


Query: 1   MSIALESNSRIPPSVFSQGGLPSYCSVLNTTGIIPVVRREAAVGDAVAPAEVDRCSSSSS 60
           MSIALESN+RIPPSVFSQ GLP YCSVLNTTGIIPVVRREAAV DAVAP +VDRCSSSSS
Sbjct: 1   MSIALESNTRIPPSVFSQAGLPPYCSVLNTTGIIPVVRREAAVADAVAPEDVDRCSSSSS 60

Query: 61  SSIGENSGFSVRSLDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 120
           SSIGENSGFSVRS DNDDGEDNEAESSY+GPLGMESLEEVLPIRRGISNFYNGKSKSFTS
Sbjct: 61  SSIGENSGFSVRSSDNDDGEDNEAESSYRGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 120

Query: 121 LADA-SSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIIRSSRSSLALAVVLSSSE 180
           LADA SSSSIK+IAKPENAFSRKRRNLLASNLIAGGISKRPII SSRSSLALAVVLSSSE
Sbjct: 121 LADASSSSSIKEIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 180

Query: 181 SHNNDDPNSRL--PLPIRPPLHPNGRASRSNSGSTVPLLCKFPTWRSYSLANIQ 232
           SH N+D NS +  P PIRPPLHPNGRASR NSGS VP LCKFPTWRSYS+ANIQ
Sbjct: 181 SHKNNDLNSIIPPPTPIRPPLHPNGRASRINSGSAVPSLCKFPTWRSYSMANIQ 234

[Close]

BLAST of HG10004303 vs. ExPASy TrEMBL
Match: A0A1S3BCZ8 (uncharacterized protein LOC103488525 OS=Cucumis melo OX=3656 GN=LOC103488525 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 6.0e-105
Identity = 211/234 (90.17%), Postives = 218/234 (93.16%), Query Frame = 0


Query: 1   MSIALESNSRIPPSVFSQGGLPSYCSVLNTTGIIPVVRREAAVGDAVAPAEVDRCSSSSS 60
           MSIALESN+RIPPSVFSQ GLP YCSVLNTTGIIPVVRREAAV DAVAP +VDRCSSSSS
Sbjct: 36  MSIALESNTRIPPSVFSQAGLPPYCSVLNTTGIIPVVRREAAVADAVAPEDVDRCSSSSS 95

Query: 61  SSIGENSGFSVRSLDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 120
           SSIGENSGFSVRS DNDDGEDNEAESSY+GPLGMESLEEVLPIRRGISNFYNGKSKSFTS
Sbjct: 96  SSIGENSGFSVRSSDNDDGEDNEAESSYRGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 155

Query: 121 LADA-SSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIIRSSRSSLALAVVLSSSE 180
           LADA SSSSIK+IAKPENAFSRKRRNLLASNLIAGGISKRPII SSRSSLALAVVLSSSE
Sbjct: 156 LADASSSSSIKEIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 215

Query: 181 SHNNDDPNSRL--PLPIRPPLHPNGRASRSNSGSTVPLLCKFPTWRSYSLANIQ 232
           SH N+D NS +  P PIRPPLHPNGRASR NSGS VP LCKFPTWRSYS+ANIQ
Sbjct: 216 SHKNNDLNSIIPPPTPIRPPLHPNGRASRINSGSAVPSLCKFPTWRSYSMANIQ 269

[Close]

BLAST of HG10004303 vs. ExPASy TrEMBL
Match: A0A6J1HF10 (uncharacterized protein LOC111462922 OS=Cucurbita moschata OX=3662 GN=LOC111462922 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 6.5e-99
Identity = 204/233 (87.55%), Postives = 211/233 (90.56%), Query Frame = 0


Query: 1   MSIALESNSRIPPSVFSQGGLPSYCSVLNTTGIIPVVRREAAVGDAVAPAE-VDRCSSSS 60
           MSIALESNSRIPPSVFSQG LPSYCSVLNTTG+IPVVRREA VGD VAPAE VDRCSSSS
Sbjct: 1   MSIALESNSRIPPSVFSQGVLPSYCSVLNTTGVIPVVRREAVVGDVVAPAEVVDRCSSSS 60

Query: 61  SSSIGENSGFSVRSLDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFT 120
           SSSIGENS FSVRS+++DDGEDNEAESSYK  LGMESLEEVLPIRRGISNFYNGKSKSFT
Sbjct: 61  SSSIGENSDFSVRSVNDDDGEDNEAESSYKESLGMESLEEVLPIRRGISNFYNGKSKSFT 120

Query: 121 SLADASS-SSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIIRSSRSSLALAVVLSSS 180
           SL DASS SSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPII S  SSLALAV +SSS
Sbjct: 121 SLGDASSTSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSRGSSLALAVFMSSS 180

Query: 181 ESHNNDDPNSRLPLPIRPPLHPNGRASRSNSGSTVPLLCKFPTWRSYSLANIQ 232
           E  + +D NSRL   IRPPLHP GRASRSNSGS VPLLCKFPTWRSYSLANIQ
Sbjct: 181 ERQSGEDLNSRLSPTIRPPLHPKGRASRSNSGSAVPLLCKFPTWRSYSLANIQ 233

[Close]

BLAST of HG10004303 vs. ExPASy TrEMBL
Match: A0A0A0KFI7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G361410 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.5e-98
Identity = 204/234 (87.18%), Postives = 212/234 (90.60%), Query Frame = 0


Query: 1   MSIALESNSRIPPSVFSQGGLPSYCSVLNTTGIIPVVRREAAVGDAVAPAEVDRCSSSSS 60
           MSIALE+N     +VFSQ GLPSYCSVLNTTGIIPVVRREAA+ DAVAPA+VDRC+SSSS
Sbjct: 1   MSIALETN-----TVFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSS 60

Query: 61  SSIGENSGFSVRSLDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 120
           SSIGENSGFSVRS DNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTS
Sbjct: 61  SSIGENSGFSVRSSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 120

Query: 121 LADA-SSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIIRSSRSSLALAVVLSSSE 180
           L DA SSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPII SSRSSLALAVVLSSSE
Sbjct: 121 LVDASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 180

Query: 181 SHNNDDPNSRLPLP--IRPPLHPNGRASRSNSGSTVPLLCKFPTWRSYSLANIQ 232
            H N+D NS LP P  IRPPL+PNGR SR NSGS VP LCKFPTWRSYS+ANIQ
Sbjct: 181 IHKNNDLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 229

[Close]

BLAST of HG10004303 vs. ExPASy TrEMBL
Match: A0A6J1K8D9 (uncharacterized protein LOC111492074 OS=Cucurbita maxima OX=3661 GN=LOC111492074 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 5.5e-98
Identity = 204/233 (87.55%), Postives = 210/233 (90.13%), Query Frame = 0


Query: 1   MSIALESNSRIPPSVFSQGGLPSYCSVLNTTGIIPVVRREAAVGDAVAPAE-VDRCSSSS 60
           MSIALESNSRIPPSVFSQG LPSYCSVLNTTG+IPVVRREA VGD VAPAE VDRCSSSS
Sbjct: 1   MSIALESNSRIPPSVFSQGVLPSYCSVLNTTGVIPVVRREAVVGDVVAPAEVVDRCSSSS 60

Query: 61  SSSIGENSGFSVRSLDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFT 120
           SSSIGENS FSVRS+++DDGEDNEAESSYK  LGMESLEEVL IRRGISNFYNGKSKSFT
Sbjct: 61  SSSIGENSDFSVRSVNDDDGEDNEAESSYKESLGMESLEEVLSIRRGISNFYNGKSKSFT 120

Query: 121 SLADASS-SSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIIRSSRSSLALAVVLSSS 180
           SL DASS SSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPII S  SSLALAV +SSS
Sbjct: 121 SLGDASSTSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSRGSSLALAVFMSSS 180

Query: 181 ESHNNDDPNSRLPLPIRPPLHPNGRASRSNSGSTVPLLCKFPTWRSYSLANIQ 232
           E  + D  NSRL   IRPPLHPNGRASRSNSGS VPLLCKFPTWRSYSLANIQ
Sbjct: 181 ERKSGDVLNSRLSPTIRPPLHPNGRASRSNSGSAVPLLCKFPTWRSYSLANIQ 233

[Close]

BLAST of HG10004303 vs. TAIR 10
Match: AT5G21940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 122.5 bits (306), Expect = 4.5e-28
Identity = 92/212 (43.40%), Postives = 125/212 (58.96%), Query Frame = 0


Query: 56  SSSSSSSIGENSGFSVRSLDN--DDGEDNEAESSYKGPLG-MESLEEVLPIRRGISNFYN 115
           SSS+SSSIG NS    +S ++  DD  +NE ES YKGPL  MESLE+VLP+R+GIS +Y+
Sbjct: 37  SSSASSSIGRNSDDGEKSSEDGGDDAGENEVESPYKGPLEMMESLEQVLPVRKGISKYYS 96

Query: 116 GKSKSFTSL------ADASSSSIKDIAKPENAFSRKRRNLLASNL-------IAGGISKR 175
           GKSKSFT+L      A  SSSS+KD+AKPEN +SR+RRNLL   +         GGISK+
Sbjct: 97  GKSKSFTNLTAEAASALTSSSSMKDLAKPENPYSRRRRNLLCHQIWENNKTTPRGGISKK 156

Query: 176 PIIRSSRSSLALAVVLSS-------SESHNNDDPNS---------------RLPLPIRPP 230
            ++ SSRS+L LA+ +++       S S  +  P S               +  +   PP
Sbjct: 157 HVMSSSRSALTLAMAVAAGVMTGEGSSSGGDSSPGSSPTTSGSPPRQLHHHQHQMKKLPP 216

[Close]

BLAST of HG10004303 vs. TAIR 10
Match: AT3G43850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21940.1); Has 215 Blast hits to 215 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 112.1 bits (279), Expect = 6.1e-25
Identity = 71/131 (54.20%), Postives = 90/131 (68.70%), Query Frame = 0


Query: 56  SSSSSSSIGENSGFSVRSLDNDDGEDNEAESSYKGPLG-MESLEEVLPIRRGISNFYNGK 115
           SS+SS SIGENS       D+D+G +NE ESSY GPL  MESLEE LPI+R IS FY GK
Sbjct: 23  SSTSSDSIGENS-------DDDEGGENEIESSYNGPLDMMESLEEALPIKRAISKFYKGK 82

Query: 116 SKSFTSLADASSSSIKDIAKPENAFSRKRRNLLASNLIA-GGISKRPIIRSSRSSLALAV 175
           SKSF SL++ SS  +KD+ KPEN +SR+RRNLL+  + + GGISK+P     +S LA++ 
Sbjct: 83  SKSFMSLSETSSLPVKDLTKPENLYSRRRRNLLSHRICSRGGISKKPF----KSVLAMSQ 142

Query: 176 VLSSSESHNND 185
               S S  +D
Sbjct: 143 REGDSSSSGDD 142

[Close]

BLAST of HG10004303 vs. TAIR 10
Match: AT2G24550.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31510.1); Has 219 Blast hits to 219 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 2; Plants - 184; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). )

HSP 1 Score: 64.3 bits (155), Expect = 1.5e-10
Identity = 54/144 (37.50%), Postives = 83/144 (57.64%), Query Frame = 0


Query: 56  SSSSSSSIGENSGFSVRSLDNDDGEDNEAESSYKGPLG--MESLEEVLPIRRGISNFYNG 115
           SS SSSSIGE+S       + ++ E+++A S  +G L     SLE+ LPI+RG+SN Y G
Sbjct: 64  SSDSSSSIGESSE------NEEEEEEDDAVSCQRGTLDSFSSSLEDSLPIKRGLSNHYVG 123

Query: 116 KSKSFTSLADASSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIIRSSRSSLALAV 175
           KSKSF +L +A+S + KD+ K EN F+++RR ++A+ L   G S                
Sbjct: 124 KSKSFGNLMEAASKA-KDLEKVENPFNKRRRLVIANKLRRRGRS---------------- 183

Query: 176 VLSSSESHNNDDPNSRLPLPIRPP 198
            +S+S  ++  +PNS   L ++ P
Sbjct: 184 -MSASNFYSWQNPNSMPLLALQEP 183

[Close]

BLAST of HG10004303 vs. TAIR 10
Match: AT5G24890.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 57.8 bits (138), Expect = 1.4e-08
Identity = 38/97 (39.18%), Postives = 58/97 (59.79%), Query Frame = 0


Query: 57  SSSSSSIGE--NSGFSVRSLDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGK 116
           SS SSSIG   +S       +N++ + +  E   +G   M SLE+ LP +RG+SN Y GK
Sbjct: 59  SSDSSSIGTPGDSEEDEEESENENDDVSSKELGLRGLASMSSLEDSLPSKRGLSNHYKGK 118

Query: 117 SKSFTSLADASSSSIKDIAKPENAFSRKRRNLLASNL 152
           SKSF +L +    S+K++AK EN  +++RR  + + L
Sbjct: 119 SKSFGNLGEI--GSVKEVAKQENPLNKRRRLQICNKL 153

[Close]

BLAST of HG10004303 vs. TAIR 10
Match: AT4G31510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 205 Blast hits to 205 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 3; Plants - 187; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 56.2 bits (134), Expect = 4.0e-08
Identity = 59/164 (35.98%), Postives = 84/164 (51.22%), Query Frame = 0


Query: 38  RREAAVGDAVAPAEVD------RCSSS----SSSSIGENSGFSVRSLDNDDGEDNEAESS 97
           R      D   PA +       RC  S    SSSS+GE S       +N++ ED+   SS
Sbjct: 12  RSSVTTHDQAVPASLSSRIGLRRCGRSPPPESSSSVGETS-------ENEEDEDDAVSSS 71

Query: 98  YKGPLG--MESLEEVLPIRRGISNFYNGKSKSFTSLADASSSSIKDIAKPENAFSRKRRN 157
               L     SLE+ LPI+RG+SN Y GKSKSF +L +AS+++  D+ K E+  +++RR 
Sbjct: 72  QGRWLNSFSSSLEDSLPIKRGLSNHYIGKSKSFGNLMEASNTN--DLVKVESPLNKRRRL 131

Query: 158 LLASNL-IAGGISKRPIIR--SSRSSLALAVVLSSSESHN-NDD 186
           L+A+ L     +S   I    +  S   LA+  S +E H  NDD
Sbjct: 132 LIANKLRRRSSLSSFSIYTKINPNSMPLLALQESDNEDHKLNDD 166

The following BLAST results are available for this feature:

BLAST of HG10004303 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0064705.1	1.2e-104	90.17	Damaged dna-binding 2, putative isoform 1 [Cucumis melo var. makuwa] >TYK00723.1...	[more]
XP_008445543.1	1.2e-104	90.17	PREDICTED: uncharacterized protein LOC103488525 [Cucumis melo]	[more]
XP_038883984.1	1.6e-104	92.70	uncharacterized protein LOC120074946 [Benincasa hispida]	[more]
XP_022962518.1	1.3e-98	87.55	uncharacterized protein LOC111462922 [Cucurbita moschata] >KAG6598596.1 hypothet...	[more]
XP_023547301.1	3.0e-98	87.12	uncharacterized protein LOC111806162 [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10004303 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10004303 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VFP0	6.0e-105	90.17	Damaged dna-binding 2, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3BCZ8	6.0e-105	90.17	uncharacterized protein LOC103488525 OS=Cucumis melo OX=3656 GN=LOC103488525 PE=...	[more]
A0A6J1HF10	6.5e-99	87.55	uncharacterized protein LOC111462922 OS=Cucurbita moschata OX=3662 GN=LOC1114629...	[more]
A0A0A0KFI7	2.5e-98	87.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G361410 PE=4 SV=1	[more]
A0A6J1K8D9	5.5e-98	87.55	uncharacterized protein LOC111492074 OS=Cucurbita maxima OX=3661 GN=LOC111492074...	[more]

BLAST of HG10004303 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G21940.1	4.5e-28	43.40	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G43850.1	6.1e-25	54.20	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G24550.1	1.5e-10	37.50	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G24890.1	1.4e-08	39.18	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G31510.1	4.0e-08	35.98	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..211
None	No IPR available	PANTHER	PTHR33172	OS08G0516900 PROTEIN	coord: 43..231
None	No IPR available	PANTHER	PTHR33172:SF37	MYOSIN LIGHT CHAIN KINASE DDB_G0279831 ISOFORM X1-RELATED	coord: 43..231

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10004303.1	HG10004303.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding