
HG10004276 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTCGTTGACTCTTAAACCCTCCTTTTCCACCCCTAAATTGTCTTTCCCCCCATCATCTTCTTCGTCTTCCTTTACTTTTCCTAGCTTCTCTCCAATTTCCTTCCCTAGGAAGCTGAGAAATGGTCTCTCGTTGCGACTCCGTGCTTACGACCCTTCCAAGAGCGACAATCCCGATGCCTCCACTGGCGATTCCAAGCCTCCCAACGGTACTTTGGTATTTCCTTCTCCCTCTCAGCTTCTCTGCTTTTTCTTGTTGCGTATGGACTGTATAGTCAATGGGTATGTTGTCAAAATGTCAACTGAAACTTGATAAAGTTTGAAGCATTACAGTAACGTAGGCTTTTGGGTGTACTCTATTCTCTGCTATATTTAGTGGAATAGTCTGAGTCAACATTTTTCAAATTGAATCTGGTTTGTTCAAAATATTGGGGCTTAACAGATAGATGTGAGATTACATTCTTTACATATCACTGGCAAACATTGAAAATGTGGATGCCATATTCATTTCTTTTAGAGCTTTTACATGATACTAGATATTAAGGGTGTGGTACTGTCTGTAAATTGTTGATAATGATTTTTAGTTTTTTTCCCCTTAAAATAAATGAATTTTGATGGGGGTTTTTTAGTCATCTTGATGAACCTGATGGCTGTTATATCATAATTAGTTCCCTTTATGTTTTATAGATTTGATTTTCTATAGTTGTTTGAATATCTTTTGTGTAATTGGCAGCCAAAAACTCGGAGAGACATTCTGCTGGAATATGTTAAAACTGTCCAGCCAGAATTCATGGAATTGTTTGTTCAGAGGGCACCACAACAGGTGGATCTCCATTGGTATTAATACCAATTTCTTTGATGTAGAATTCAGCTTACTTTCATTTTCAATTCCATAACTTCCTCTGGTAATTTTATACTTCTCCGGTTCCTTTTTAGGTTGTTGAAGCAATGCGCCAAACAGTCACAAATATGATTGGAACTCTACCTCCACAGTTTTTTGCAGTTACTGTTACCACAGTACGTATATACTAGTTGTGTAATTCTTACATTCAAAGTCGCTCAAATGGCCAAATATTTGTTGTACAATTGATATTTGATAAGAACAGGTTTAACTTTTAAATATTTATTTACTATACAACTATGTTTAATTTTTAATATTTGGTTCAGGTTGCTGAAAATCTTGCACAGCTCATGTACAGTGTAATGATGACTGGATATATGTTTAAAAATGCTCAAAATCGCTTAGAACTGCAGCAAAGTTTAGAGCAGGTTGCTCTCCCAGAACCAAAGGATGAAAAGGTAGTTTGAATAGTTTTATATAGTTATTGGACTTTACATCTAAATATTTTCATTTTGGAGTTAACCTTTGCCCATTTGTTCGCTCCCCCACAAGAAGTAATTACAATACTGTCGGTCTTTTAATGTGCATCTGTTACTTGACTGTGGGTTAAAAGCCCCACCTGCATTGATGCCTGTCAATGTTATGATAACTTAGTTTTTCCTTTGCCTATTGTTTTATTATGTGTAATCATAATTTGGTTTCGGCCTTGGCTATATCACATATGTCACTTCACTTCGACATTACTACATGTTCCATCTTGTAGTTTTCGTTTAGGCAAAATCATTAGTTTTTCCTTCTTTTTTTTTTTACCTTGATAGACTACTATAGTACATCTGTATTTATGCTGTGGCAGAAGTTGATCATTTGTGGAATTTTAAATACAGTAGGCACTAGGGAATGATGTGGAATATTTATGAAAAGCTTTGCTCTACAGTCTGTTGGTCCCTCAGTCTGTTAGATTTTCACTCTTAAAATTCTGCAAGTGATTTTTTGTTGTTGTTGTTCCTGCTGTCACGAGATCCTATTTTCTCTCTGAGCATTCTATCTATCTATAATTATTAATATTGTGATTTTACTCCATTCTAATATAATCATGGCTAAGGCCTAATGTATGTGATCGGTTCTGCAGTTCAAGGATCCTTCTTTTCTTCCTAATTTGTCATTGTTCTCAGGTCACATAGTGCCTGTAAAAACATTCTTATACAATTTCATTATGAATTTCTCTGTTGTTGACAAACTTACGGTGTGGCATACTGTTCAAAGTGTTTGGTTTTCACTAAAATTTATGTATGCATTAATCCTGCGATTGGTCAGGATGATTTGAATTATGCAGCTGGTACGCAAAAGAATGTCACAGGTGAAGTTATCAGGTGGAATAATGTATCGGGTCCCGAGAGAATTGATGCTAAAAGGTACATAGAATTACTTGAAGCAGAGATAGAGGAACTGAATCGTCAAGTAGGTAGAAAATCAGCAAATGGGCAAAATGAACTCTTGGAATATCTCAAAACACTTGAACCCCAAAATCTGAAGGTAAGAAAACTTCTCTTCACTTGTTTACTAGCCTTTTGCTTTTATTGGCCTTGTTGACTGCTAATTACATTGTTGATTACTTGTCTGGTATGTGAGTCTCCTGGACTTACAACCTCATCTAGTCATCTGTGACAAAAGTAATTGTCTGTGATGGGAAAAAGTGATTCTCTTTTATTCCTGAAACAGGAAATACTTCTCATTTACATATCGAAAAGTTCTTGTTATAACAAAGGTGATGATGCTTATGTCTCTGCTCCAAGATACAATTGATATGGTTGTGGAACCGAATGCACTTGTAATTCAGACAAGATATCATGTCATTTAAATGCTATTCCTTTAGCCACAGCTTTTAGGACAAGCTATCGTTCGTGAGCGGATTAACAGTAAGCCGTTAGAGCCGAGGTATATAAGCCATTCGCAAATAGCTTGGGTTTTTCTCTCTTTTTTTCCTTTTTTCTTTTAAATTTTTTTTTTTTTAAGGAAACAATAAATGAGAAAAATTCATTGAAATAAGGAAAGAGACTAACGCTCCAAGGACACAAAGCTTCACCCAAGAAATAAAAGAACTAAAAGAAGGAATACAGAAGAAATAAATAACAACTCAAATAAATATAAATCCTCCATGTAGAACCAAAAAGAAAATAATCCAAACAAAACACCCAAGTAAAGGCCAACAATGATGAGCACTAAGCAAATGAAACCCGGGAGGGGGGGAGTTGCGCCAAGAGAAACTGAAGAGCAAAGATCTTGGAAAACGAACATCAAAATGAAACTGAGAAGATCTTCAACAACACTAAAATAACAACCCCAAAGCCTCTGAAGTGACAAAGAGAATTACACATTACAATATTATCTATAAAGATTAGTGAAACATAGTTAGATCTTAATTTGTGGTGATTGAGGATTTCATCGGTAGTCCACACATCTCAATTCATAAATGAAATTTGGAAGGAATTGAAGGGTACTTTACAACTTATCTTAATTTGAGTATGAGTATTCTCAAGATGGAGTTGTACAAGATTTTATTTTTTTTTTGGGGAGGGGGGATTTCAATAATTTATATTTCATTCTCTGGTCTCCATCGGGAAAATGAGAATCATTTGATATTGCATGCATACAAGTTCTCTTCTAACTAGAATGATGTTATAAAGGATACCTAACTCATCTGGATCCTTCCTTTTATCCAGTGTAGTGAACTATGCAACTTTGTCGTATTGATTATATCCTTTTCAAGTTAGCTGCTTCCTTAATTTTATTATTCTGAATCTAAACAAGCACTAATGGTTCATTGATTAGTTGTTTGTACCCGTACTGATTTTATGCCATCTCTAGCACAGTCTCAACCTTTGATTACCACAAATGTGTAGGAGTTGACAAGTAGCGCTGGTGAGGATGCTGTCGTTGCAATGAATACATTCATAAAGCGCCTATTAGTGGTCTCAGATCCAAGTCAAATCAAGGTCTGTGTCCAGACAAACATCCTCTATCCTTTTTTTATAATTGTAACTGCCATGGGTCAATGATCGGTTTGGCTAGTTCGGTCGAGAACGAAACCAAGTCTAACCGATTTACTCCACTACATGAAGCAGCATTATAAAGTTGTATCTGAACTTCCTGCATATATTACGGATCTTTGTATTTCAGACAACTGTAACAGAGACAACAGCACCAGAGCTGGCAAAGCTTCTGTATTGGCTAATGGTGGTTGGGTACAGCATTCGCAACATCGAAGTTCGATTCGACATGGAAAGAATTCTGGGGAGTTCACCGAAGCTTGCAGAATTACCTCCTGGAGAAATTGTGTAA ATGTCTTCGTTGACTCTTAAACCCTCCTTTTCCACCCCTAAATTGTCTTTCCCCCCATCATCTTCTTCGTCTTCCTTTACTTTTCCTAGCTTCTCTCCAATTTCCTTCCCTAGGAAGCTGAGAAATGGTCTCTCGTTGCGACTCCGTGCTTACGACCCTTCCAAGAGCGACAATCCCGATGCCTCCACTGGCGATTCCAAGCCTCCCAACGGTACTTTGCCAAAAACTCGGAGAGACATTCTGCTGGAATATGTTAAAACTGTCCAGCCAGAATTCATGGAATTGTTTGTTCAGAGGGCACCACAACAGGTTGTTGAAGCAATGCGCCAAACAGTCACAAATATGATTGGAACTCTACCTCCACAGTTTTTTGCAGTTACTGTTACCACAGTTGCTGAAAATCTTGCACAGCTCATGTACAGTGTAATGATGACTGGATATATGTTTAAAAATGCTCAAAATCGCTTAGAACTGCAGCAAAGTTTAGAGCAGGTTGCTCTCCCAGAACCAAAGGATGAAAAGGATGATTTGAATTATGCAGCTGGTACGCAAAAGAATGTCACAGGTGAAGTTATCAGGTGGAATAATGTATCGGGTCCCGAGAGAATTGATGCTAAAAGGTACATAGAATTACTTGAAGCAGAGATAGAGGAACTGAATCGTCAAGTAGGTAGAAAATCAGCAAATGGGCAAAATGAACTCTTGGAATATCTCAAAACACTTGAACCCCAAAATCTGAAGGAGTTGACAAGTAGCGCTGGTGAGGATGCTGTCGTTGCAATGAATACATTCATAAAGCGCCTATTAGTGGTCTCAGATCCAAGTCAAATCAAGACAACTGTAACAGAGACAACAGCACCAGAGCTGGCAAAGCTTCTGTATTGGCTAATGGTGGTTGGGTACAGCATTCGCAACATCGAAGTTCGATTCGACATGGAAAGAATTCTGGGGAGTTCACCGAAGCTTGCAGAATTACCTCCTGGAGAAATTGTGTAA ATGTCTTCGTTGACTCTTAAACCCTCCTTTTCCACCCCTAAATTGTCTTTCCCCCCATCATCTTCTTCGTCTTCCTTTACTTTTCCTAGCTTCTCTCCAATTTCCTTCCCTAGGAAGCTGAGAAATGGTCTCTCGTTGCGACTCCGTGCTTACGACCCTTCCAAGAGCGACAATCCCGATGCCTCCACTGGCGATTCCAAGCCTCCCAACGGTACTTTGCCAAAAACTCGGAGAGACATTCTGCTGGAATATGTTAAAACTGTCCAGCCAGAATTCATGGAATTGTTTGTTCAGAGGGCACCACAACAGGTTGTTGAAGCAATGCGCCAAACAGTCACAAATATGATTGGAACTCTACCTCCACAGTTTTTTGCAGTTACTGTTACCACAGTTGCTGAAAATCTTGCACAGCTCATGTACAGTGTAATGATGACTGGATATATGTTTAAAAATGCTCAAAATCGCTTAGAACTGCAGCAAAGTTTAGAGCAGGTTGCTCTCCCAGAACCAAAGGATGAAAAGGATGATTTGAATTATGCAGCTGGTACGCAAAAGAATGTCACAGGTGAAGTTATCAGGTGGAATAATGTATCGGGTCCCGAGAGAATTGATGCTAAAAGGTACATAGAATTACTTGAAGCAGAGATAGAGGAACTGAATCGTCAAGTAGGTAGAAAATCAGCAAATGGGCAAAATGAACTCTTGGAATATCTCAAAACACTTGAACCCCAAAATCTGAAGGAGTTGACAAGTAGCGCTGGTGAGGATGCTGTCGTTGCAATGAATACATTCATAAAGCGCCTATTAGTGGTCTCAGATCCAAGTCAAATCAAGACAACTGTAACAGAGACAACAGCACCAGAGCTGGCAAAGCTTCTGTATTGGCTAATGGTGGTTGGGTACAGCATTCGCAACATCGAAGTTCGATTCGACATGGAAAGAATTCTGGGGAGTTCACCGAAGCTTGCAGAATTACCTCCTGGAGAAATTGTGTAA MSSLTLKPSFSTPKLSFPPSSSSSSFTFPSFSPISFPRKLRNGLSLRLRAYDPSKSDNPDASTGDSKPPNGTLPKTRRDILLEYVKTVQPEFMELFVQRAPQQVVEAMRQTVTNMIGTLPPQFFAVTVTTVAENLAQLMYSVMMTGYMFKNAQNRLELQQSLEQVALPEPKDEKDDLNYAAGTQKNVTGEVIRWNNVSGPERIDAKRYIELLEAEIEELNRQVGRKSANGQNELLEYLKTLEPQNLKELTSSAGEDAVVAMNTFIKRLLVVSDPSQIKTTVTETTAPELAKLLYWLMVVGYSIRNIEVRFDMERILGSSPKLAELPPGEIV Homology
BLAST of HG10004276 vs. NCBI nr
Match: XP_008464859.1 (PREDICTED: uncharacterized protein LOC103502630 isoform X1 [Cucumis melo]) HSP 1 Score: 578.9 bits (1491), Expect = 2.7e-161 Identity = 308/331 (93.05%), Postives = 313/331 (94.56%), Query Frame = 0
BLAST of HG10004276 vs. NCBI nr
Match: XP_004144230.1 (uncharacterized protein LOC101214493 [Cucumis sativus] >KGN47546.1 hypothetical protein Csa_018942 [Cucumis sativus]) HSP 1 Score: 576.2 bits (1484), Expect = 1.8e-160 Identity = 305/331 (92.15%), Postives = 310/331 (93.66%), Query Frame = 0
BLAST of HG10004276 vs. NCBI nr
Match: XP_038885097.1 (uncharacterized protein LOC120075615 [Benincasa hispida]) HSP 1 Score: 568.5 bits (1464), Expect = 3.7e-158 Identity = 308/331 (93.05%), Postives = 311/331 (93.96%), Query Frame = 0
BLAST of HG10004276 vs. NCBI nr
Match: XP_023547210.1 (uncharacterized protein LOC111806088 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 568.5 bits (1464), Expect = 3.7e-158 Identity = 302/331 (91.24%), Postives = 314/331 (94.86%), Query Frame = 0
BLAST of HG10004276 vs. NCBI nr
Match: XP_022999736.1 (uncharacterized protein LOC111493994 [Cucurbita maxima]) HSP 1 Score: 566.2 bits (1458), Expect = 1.8e-157 Identity = 302/331 (91.24%), Postives = 313/331 (94.56%), Query Frame = 0
BLAST of HG10004276 vs. ExPASy TrEMBL
Match: A0A1S3CMY9 (uncharacterized protein LOC103502630 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502630 PE=4 SV=1) HSP 1 Score: 578.9 bits (1491), Expect = 1.3e-161 Identity = 308/331 (93.05%), Postives = 313/331 (94.56%), Query Frame = 0
BLAST of HG10004276 vs. ExPASy TrEMBL
Match: A0A0A0KIH2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358100 PE=4 SV=1) HSP 1 Score: 576.2 bits (1484), Expect = 8.5e-161 Identity = 305/331 (92.15%), Postives = 310/331 (93.66%), Query Frame = 0
BLAST of HG10004276 vs. ExPASy TrEMBL
Match: A0A6J1KDY3 (uncharacterized protein LOC111493994 OS=Cucurbita maxima OX=3661 GN=LOC111493994 PE=4 SV=1) HSP 1 Score: 566.2 bits (1458), Expect = 8.8e-158 Identity = 302/331 (91.24%), Postives = 313/331 (94.56%), Query Frame = 0
BLAST of HG10004276 vs. ExPASy TrEMBL
Match: A0A6J1G316 (uncharacterized protein LOC111450326 OS=Cucurbita moschata OX=3662 GN=LOC111450326 PE=4 SV=1) HSP 1 Score: 562.8 bits (1449), Expect = 9.7e-157 Identity = 300/331 (90.63%), Postives = 312/331 (94.26%), Query Frame = 0
BLAST of HG10004276 vs. ExPASy TrEMBL
Match: A0A6J1DI85 (uncharacterized protein LOC111020737 OS=Momordica charantia OX=3673 GN=LOC111020737 PE=4 SV=1) HSP 1 Score: 557.8 bits (1436), Expect = 3.1e-155 Identity = 297/331 (89.73%), Postives = 308/331 (93.05%), Query Frame = 0
BLAST of HG10004276 vs. TAIR 10
Match: AT1G63610.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 537 Blast hits to 411 proteins in 100 species: Archae - 0; Bacteria - 231; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink). ) HSP 1 Score: 444.1 bits (1141), Expect = 9.7e-125 Identity = 246/329 (74.77%), Postives = 279/329 (84.80%), Query Frame = 0
BLAST of HG10004276 vs. TAIR 10
Match: AT1G63610.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 443.7 bits (1140), Expect = 1.3e-124 Identity = 246/330 (74.55%), Postives = 279/330 (84.55%), Query Frame = 0
BLAST of HG10004276 vs. TAIR 10
Match: AT5G14970.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 579 Blast hits to 397 proteins in 95 species: Archae - 0; Bacteria - 294; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink). ) HSP 1 Score: 84.7 bits (208), Expect = 1.5e-16 Identity = 87/340 (25.59%), Postives = 163/340 (47.94%), Query Frame = 0
BLAST of HG10004276 vs. TAIR 10
Match: AT2G14910.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G14970.1); Has 605 Blast hits to 425 proteins in 102 species: Archae - 0; Bacteria - 300; Metazoa - 25; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 191 (source: NCBI BLink). ) HSP 1 Score: 79.0 bits (193), Expect = 8.2e-15 Identity = 91/380 (23.95%), Postives = 173/380 (45.53%), Query Frame = 0
BLAST of HG10004276 vs. TAIR 10
Match: AT2G14910.2 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G14970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 67.4 bits (163), Expect = 2.5e-11 Identity = 76/306 (24.84%), Postives = 146/306 (47.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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